CmaCh08G005240 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATAAATGCAAAAGCTCCGAGGATTCCACAGAGCTATATATAAAGCTAAGGTTAGAGAGTGGATGATTAAGTTGAGGCCCATCATGTACTAAGAGGGGAAGGGATGCAGGACAACAAAATGATAAAAGCCAAGTTGTTAGTCAGAGACAGATGAACAGAAAAGGAAAGAGAATGGGTTCAAGTTTATTGCCATGAATTCCACAAGAATTCAAAGAGTGGGTCGCGTCTTGTTGGTGTCGAGACGATAAAAGGATGAGAAGATAGAGATCTCGTTAAAGCAGACGAGATTTTGTCTGACAGAAAGAAATAGCTAACTCACAAAATCAAAGGTTGTTGTCTCCTAATTCCTCTCAACTCTGTGTGTGTGTGTGTGTGTGTGTGAAGAATGGAGGGAACAGATTTATCTTCGACAACTGAACAGAAATTGGGAAGATTCAAAAGGGTGTGTGTATTCTGTGGCAGCAAAGCTGGATACAAGTCTACATATGCTGAAGCCACCATTGAACTTGGTAAAATACTGGTAATTTCTACATCAATCAATGGACTATACTATAATTACAAGTATTTATTCTATATTTTTTGCTCTTCTCGTTCTTCTTCAAGTTGTATGTAATGTTTTCCCACAAAAGTTGAAAGTCCTAATCTTTTCTTGGTTGTATCAGGTTCAGAGAAAAATAGACTTGGTTTATGGGGGAGGAAGTGTGGGCCTAATGGGTTTGATCTCTCAAACTGTGTTCTCTGGAGGCTGCCATGTACTTGGGTATGTTTTCATACAAATTTACATTTCTGTTTACCATGTTGCTAATTTTGTTGTTTCATTCATGATGTACAGAGTGATTCCCAAGGCACTTCAGATTCATGAGGTACCTTTTCTGCAAGTTTCCTTCCTAGGTCTTTTGGAATGTAAGCTGTTTTCTTTTTCTTTGTTAAATTAATGAAACCCCACTTGTAGATATCAGGAGAGACTGTCGGAGAAGTGAAAACAGTAGCAGATATGCACCAAAGGAAGTCAGAAATGGCAAAACATGCTGATGCATTTGTAGCTCTTCCAGGTTATTATAACAAATATAGACTGTGTGTGTATTTGCCCTGAAAATGGCTTGTTTCATTTACTTAACTGGCAGAAACTTAAAATCCGTTGAATTAGGTGGCTATGGAACCATGGAAGAATTGCTAGAGATGATAACTTGGGCTCAGCTAGGAATTCATGACAAGCCAGTAAGATATGGATTTTTATTGACAACTTTCTGGAAAAAAGAGTAAAGAATACGACAAAGATGGTTTTTCAGATCTCCATTCTTTACTTCCTTGGTTCATTCACAATTCCAACAGTGTTCTTGAGAACAACTAATAACAAAAAAACAAGAAACAGAGATGTGATTGGAGTGGTTTATTGTTATCTTGCCCTTTTATTGGTTTTGAAAAATGTGTTATCAGGTAGGATTGCTAAATGTAGATGGGTACTACGACAGCTTGCTTGCCTTATTCGACAAAGGAGTAGAGGAAGGTTTCATAGACAATGCAGCCAGGAAAATAGTGGTAATAGCAAACACAGCAGAGGAACTAATACAGACAATGGAGGTAGGAAGGGGAGAAGGTGCTCTATTAGAGGTTGCTGAATTATTGGTGGGAAACAGATTTTTGTCCGAAAAGGCACGAAAAGAAAGGATTACTCATTGTATTTTGGCTATGTTTTGCAGGAGTATGTGGCTGTCCATGACAAGGTTGCACCCAGACAAAGATGGGAAGTGGACCAATAATCAGAGTCTACTCAAAGTGGGCAATCCTTGAGATCTTAGATCTCAATCACCATCGAGCAAGCCATTTGTATAAATATCTGGGGTTGTGTGCTCAAATTTGATCAAGGGGATTACCAAAAGATAGACCAGATCTCTCTATCTCTCTCTCAAGATCCTCAATCTTGATCAATTATTTGTACATCCTTAAAGATGACCTGTATTAAATTCCACTAAGAATCAATGGAATAGTAAGATCTTTCTCTCTCATCAGGCCATTGACTAACTTAAAAAAGGCAAGGGAAAACAAGTTATACATGGTTAATGGTACAAAATAGGTGTCCAAAAGGCAATGAAAGAGAAGAAGACATTTTGGAGGGTAGGGATGCAAGGAGAAGAGACCCTCCAACTTGACCATTGTACCAATGGTGCAGCAAAGTTCATTATTACATTGTGATGTGTGGATAGCAGTATTTTGGATTTTGGGTCTTTATTCACTGAGCTGGGACCCTCCCTGCAGAGTGACCCATTTGTTTCCTAGTGGCTTCTTTTCTCTTCTCTTCTCCTCAATTTCTTTCCATTAATATGTTTATCAGACAATCTTTTCCTTCTCGTTAGTGCTGTCAAAAACACATTATGTTCCAG AATAAATGCAAAAGCTCCGAGGATTCCACAGAGCTATATATAAAGCTAAGGTTAGAGAGTGGATGATTAAGTTGAGGCCCATCATGTACTAAGAGGGGAAGGGATGCAGGACAACAAAATGATAAAAGCCAAGTTGTTAGTCAGAGACAGATGAACAGAAAAGGAAAGAGAATGGGTTCAAGTTTATTGCCATGAATTCCACAAGAATTCAAAGAGTGGGTCGCGTCTTGTTGGTGTCGAGACGATAAAAGGATGAGAAGATAGAGATCTCGTTAAAGCAGACGAGATTTTGTCTGACAGAAAGAAATAGCTAACTCACAAAATCAAAGGTTGTTGTCTCCTAATTCCTCTCAACTCTGTGTGTGTGTGTGTGTGTGTGTGAAGAATGGAGGGAACAGATTTATCTTCGACAACTGAACAGAAATTGGGAAGATTCAAAAGGGTGTGTGTATTCTGTGGCAGCAAAGCTGGATACAAGTCTACATATGCTGAAGCCACCATTGAACTTGGTAAAATACTGGTTCAGAGAAAAATAGACTTGGTTTATGGGGGAGGAAGTGTGGGCCTAATGGGTTTGATCTCTCAAACTGTGTTCTCTGGAGGCTGCCATGTACTTGGAGTGATTCCCAAGGCACTTCAGATTCATGAGATATCAGGAGAGACTGTCGGAGAAGTGAAAACAGTAGCAGATATGCACCAAAGGAAGTCAGAAATGGCAAAACATGCTGATGCATTTGTAGCTCTTCCAGGTGGCTATGGAACCATGGAAGAATTGCTAGAGATGATAACTTGGGCTCAGCTAGGAATTCATGACAAGCCAGTAGGATTGCTAAATGTAGATGGGTACTACGACAGCTTGCTTGCCTTATTCGACAAAGGAGTAGAGGAAGGTTTCATAGACAATGCAGCCAGGAAAATAGTGGTAATAGCAAACACAGCAGAGGAACTAATACAGACAATGGAGGTAGGAAGGGGAGAAGGTGCTCTATTAGAGGAGTATGTGGCTGTCCATGACAAGGTTGCACCCAGACAAAGATGGGAAGTGGACCAATAATCAGAGTCTACTCAAAGTGGGCAATCCTTGAGATCTTAGATCTCAATCACCATCGAGCAAGCCATTTGTATAAATATCTGGGGTTGTGTGCTCAAATTTGATCAAGGGGATTACCAAAAGATAGACCAGATCTCTCTATCTCTCTCTCAAGATCCTCAATCTTGATCAATTATTTGTACATCCTTAAAGATGACCTGTATTAAATTCCACTAAGAATCAATGGAATAGTAAGATCTTTCTCTCTCATCAGGCCATTGACTAACTTAAAAAAGGCAAGGGAAAACAAGTTATACATGGTTAATGGTACAAAATAGGTGTCCAAAAGGCAATGAAAGAGAAGAAGACATTTTGGAGGGTAGGGATGCAAGGAGAAGAGACCCTCCAACTTGACCATTGTACCAATGGTGCAGCAAAGTTCATTATTACATTGTGATGTGTGGATAGCAGTATTTTGGATTTTGGGTCTTTATTCACTGAGCTGGGACCCTCCCTGCAGAGTGACCCATTTGTTTCCTAGTGGCTTCTTTTCTCTTCTCTTCTCCTCAATTTCTTTCCATTAATATGTTTATCAGACAATCTTTTCCTTCTCGTTAGTGCTGTCAAAAACACATTATGTTCCAG ATGGAGGGAACAGATTTATCTTCGACAACTGAACAGAAATTGGGAAGATTCAAAAGGGTGTGTGTATTCTGTGGCAGCAAAGCTGGATACAAGTCTACATATGCTGAAGCCACCATTGAACTTGGTAAAATACTGGTTCAGAGAAAAATAGACTTGGTTTATGGGGGAGGAAGTGTGGGCCTAATGGGTTTGATCTCTCAAACTGTGTTCTCTGGAGGCTGCCATGTACTTGGAGTGATTCCCAAGGCACTTCAGATTCATGAGATATCAGGAGAGACTGTCGGAGAAGTGAAAACAGTAGCAGATATGCACCAAAGGAAGTCAGAAATGGCAAAACATGCTGATGCATTTGTAGCTCTTCCAGGTGGCTATGGAACCATGGAAGAATTGCTAGAGATGATAACTTGGGCTCAGCTAGGAATTCATGACAAGCCAGTAGGATTGCTAAATGTAGATGGGTACTACGACAGCTTGCTTGCCTTATTCGACAAAGGAGTAGAGGAAGGTTTCATAGACAATGCAGCCAGGAAAATAGTGGTAATAGCAAACACAGCAGAGGAACTAATACAGACAATGGAGGTAGGAAGGGGAGAAGGTGCTCTATTAGAGGAGTATGTGGCTGTCCATGACAAGGTTGCACCCAGACAAAGATGGGAAGTGGACCAATAA MEGTDLSSTTEQKLGRFKRVCVFCGSKAGYKSTYAEATIELGKILVQRKIDLVYGGGSVGLMGLISQTVFSGGCHVLGVIPKALQIHEISGETVGEVKTVADMHQRKSEMAKHADAFVALPGGYGTMEELLEMITWAQLGIHDKPVGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVGRGEGALLEEYVAVHDKVAPRQRWEVDQ
BLAST of CmaCh08G005240 vs. Swiss-Prot
Match: LOG1_ARATH (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana GN=LOG1 PE=1 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 1.2e-75 Identity = 140/207 (67.63%), Postives = 167/207 (80.68%), Query Frame = 1
BLAST of CmaCh08G005240 vs. Swiss-Prot
Match: LOGLA_ORYSJ (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryza sativa subsp. japonica GN=LOGL10 PE=2 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 9.9e-75 Identity = 139/205 (67.80%), Postives = 162/205 (79.02%), Query Frame = 1
BLAST of CmaCh08G005240 vs. Swiss-Prot
Match: LOGL2_ORYSJ (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica GN=LOGL2 PE=3 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 1.4e-73 Identity = 142/225 (63.11%), Postives = 168/225 (74.67%), Query Frame = 1
BLAST of CmaCh08G005240 vs. Swiss-Prot
Match: LOG3_ARATH (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana GN=LOG3 PE=1 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 3.2e-73 Identity = 132/207 (63.77%), Postives = 164/207 (79.23%), Query Frame = 1
BLAST of CmaCh08G005240 vs. Swiss-Prot
Match: LOGL6_ORYSJ (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica GN=LOGL6 PE=2 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 4.2e-73 Identity = 134/207 (64.73%), Postives = 163/207 (78.74%), Query Frame = 1
BLAST of CmaCh08G005240 vs. TrEMBL
Match: A0A0A0K9R7_CUCSA (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Cucumis sativus GN=Csa_7G427120 PE=3 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 2.2e-105 Identity = 198/222 (89.19%), Postives = 206/222 (92.79%), Query Frame = 1
BLAST of CmaCh08G005240 vs. TrEMBL
Match: W9QF48_9ROSA (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Morus notabilis GN=L484_012503 PE=3 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 5.6e-93 Identity = 170/222 (76.58%), Postives = 193/222 (86.94%), Query Frame = 1
BLAST of CmaCh08G005240 vs. TrEMBL
Match: B9HNQ3_POPTR (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Populus trichocarpa GN=POPTR_0009s06510g PE=3 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 4.0e-91 Identity = 169/222 (76.13%), Postives = 192/222 (86.49%), Query Frame = 1
BLAST of CmaCh08G005240 vs. TrEMBL
Match: D7T324_VITVI (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Vitis vinifera GN=VIT_13s0064g00740 PE=3 SV=1) HSP 1 Score: 337.4 bits (864), Expect = 1.3e-89 Identity = 167/223 (74.89%), Postives = 191/223 (85.65%), Query Frame = 1
BLAST of CmaCh08G005240 vs. TrEMBL
Match: A0A061E364_THECC (Cytokinin riboside 5'-monophosphate phosphoribohydrolase OS=Theobroma cacao GN=TCM_005872 PE=3 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 1.4e-88 Identity = 168/221 (76.02%), Postives = 189/221 (85.52%), Query Frame = 1
BLAST of CmaCh08G005240 vs. TAIR10
Match: AT2G28305.1 (AT2G28305.1 Putative lysine decarboxylase family protein) HSP 1 Score: 284.3 bits (726), Expect = 6.6e-77 Identity = 140/207 (67.63%), Postives = 167/207 (80.68%), Query Frame = 1
BLAST of CmaCh08G005240 vs. TAIR10
Match: AT3G53450.1 (AT3G53450.1 Putative lysine decarboxylase family protein) HSP 1 Score: 274.2 bits (700), Expect = 6.8e-74 Identity = 134/218 (61.47%), Postives = 169/218 (77.52%), Query Frame = 1
BLAST of CmaCh08G005240 vs. TAIR10
Match: AT5G11950.1 (AT5G11950.1 Putative lysine decarboxylase family protein) HSP 1 Score: 270.4 bits (690), Expect = 9.9e-73 Identity = 134/212 (63.21%), Postives = 166/212 (78.30%), Query Frame = 1
BLAST of CmaCh08G005240 vs. TAIR10
Match: AT5G06300.1 (AT5G06300.1 Putative lysine decarboxylase family protein) HSP 1 Score: 267.7 bits (683), Expect = 6.4e-72 Identity = 136/213 (63.85%), Postives = 162/213 (76.06%), Query Frame = 1
BLAST of CmaCh08G005240 vs. TAIR10
Match: AT2G35990.1 (AT2G35990.1 Putative lysine decarboxylase family protein) HSP 1 Score: 260.4 bits (664), Expect = 1.0e-69 Identity = 127/209 (60.77%), Postives = 157/209 (75.12%), Query Frame = 1
BLAST of CmaCh08G005240 vs. NCBI nr
Match: gi|449436679|ref|XP_004136120.1| (PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 isoform X1 [Cucumis sativus]) HSP 1 Score: 389.8 bits (1000), Expect = 3.2e-105 Identity = 198/222 (89.19%), Postives = 206/222 (92.79%), Query Frame = 1
BLAST of CmaCh08G005240 vs. NCBI nr
Match: gi|659122749|ref|XP_008461304.1| (PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like isoform X1 [Cucumis melo]) HSP 1 Score: 383.6 bits (984), Expect = 2.3e-103 Identity = 194/222 (87.39%), Postives = 204/222 (91.89%), Query Frame = 1
BLAST of CmaCh08G005240 vs. NCBI nr
Match: gi|778728600|ref|XP_011659444.1| (PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 isoform X2 [Cucumis sativus]) HSP 1 Score: 367.5 bits (942), Expect = 1.7e-98 Identity = 188/222 (84.68%), Postives = 194/222 (87.39%), Query Frame = 1
BLAST of CmaCh08G005240 vs. NCBI nr
Match: gi|659122751|ref|XP_008461305.1| (PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like isoform X2 [Cucumis melo]) HSP 1 Score: 361.3 bits (926), Expect = 1.2e-96 Identity = 184/222 (82.88%), Postives = 192/222 (86.49%), Query Frame = 1
BLAST of CmaCh08G005240 vs. NCBI nr
Match: gi|703068385|ref|XP_010088222.1| (hypothetical protein L484_012503 [Morus notabilis]) HSP 1 Score: 348.6 bits (893), Expect = 8.1e-93 Identity = 170/222 (76.58%), Postives = 193/222 (86.94%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |