CmaCh08G004680 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGACGACAAAGTCGACACCCAAATCACAAGCCGATCGGCTTACATTAATAGAGGAGGAAATGTTGTTCCTCAAAGAAGCCCCTGACATCATCCGCGTCCTGGAAGCACGGGTGAAAGAATTGAGTGGGAAAGTCGTAGAGATCGACGCAATGGGTAGCCGCCTGGATGGGTTGCCAATCGCAAAATTGATGTTTCGGGTGACCTCATTCGAAGAAAAGGTTGCTCCTACGAGCAGCCCAAGACCGTCTGGTAGCCCCGATAGCTCTGTCGCACACAAGGAGGGATGTGGCGAAGAGTTCGACGTGCTACAAAATACAATGATGAGTTTGTTCAATGGATTAGCTGACGAATTCAGAACAACCATCGATGACATGCAAGAAAAGATGTTTGCCATGAACACTCGAATCGAGGTGACCATGAAAGTTGTGCAGAACGTCTCGGCTGGACAAACTAATACAGGGTTCAACAAACTGAAGTTCCCAGATCCTAGACCTTTTAAAGGGAACCGGGATGCCAAAGAGTTGGAGAACTTTATCTTTGATGTCGAACAGTACTTCAAAGCCACACCGGCCTGTACCGACGACATGAAGGTGGCAGTAGCCTCGATGTATCTCATAGACGACACCAAACTTTGGTGGCGTATGAAGGTACAAGACATCGAGAATGAATTGTGCACCATAGACTCGTGGGAAGACTTCAAGAGAGAGTTGAGGGACCTATTCCTCCCCGAAAACGTAGATTATCTAGCAATGGAAAAACTAATAGCTCTAAAGCAAACTGGAAGCATAAGGGACTATGTCAAACAATTTTCGCCCCTGATGCTAGATATTAGGGGCACATCAGAGAAGGACAAGGTGTTCTTCTTTATAAATGGGTTACAACCGTGGGCCAAGACAAAAGTACATGAGAAAAAAGTCCAAAACCTAGCTACCGCAATTGTCAGCGCCGAGAGACTCCTAAACTATGGGAACGAGGCGAGTTACCAAAGAAAAACAACACAGGCCCCAAACACTGGGGGCAAAACCTGATAAGAAAAGGAACCACTACAAGGGGAGTAAGATTCGGATTATCTTGTTGATCGAATATCTCAAGGCAAGAACATTGTTTGAGATTCGAATCACTCCACAAGCAAGATCGATCATGTCTAGCTTGAATGATTCTTGTTGATCAAATATCTCAAGGCAAGAACACTTCCATGAGATTCGAATCACTCCACAAGCAAGATTGATCATGTCGAACTTGAATGATTCTACATGCAACCTAAACTACATAGAATTGCAAAGAAACTTAGTCATTGGCTAAAGAAGAGCACAAATGCTTCTTTTTACTATATTTTTCAAGTCTCTTACACATACAGCATACATGGCTTTATATAGCCTCAAAATGAAACTACTAAAGTCATTCCAAGAGTTGTAACATTCATACTTAATGGCCATAATTAACCATTATGTAATTGTAACCTATAGTAAATAAAGTCTTAAAATACATAAATGAAATACAATAACTCTAAATTGTAACCCACCCAAAATTTATAACAATCAAACTTCATTCTTCTTCAATGTGGCATGAATTGAAACATCTTTTGATAATTTTGACAACATTTTCTTCACATCTTCATTGAAGTATATTGTATGATTGATGTCTTTTGGTTCATATCAAAACCTATAAGCCGTCAGGTCACCGAAATGGAAGCCCCAACAGGCCAAACGGAGGTAACGAAAGACCAAGCGGGTGGACAGATAGACCTCCTCAGAACAACCAAGCGGAGACATCTCGAGGACCTTACCCTCAAAGGAACCACCCGATGACACCTTTACAATGCATATTGTGTAAAGGCCCCCACAAAGTGTCTTACTGTCCTCATTGGGCCTCTCTCACTGCACTCCAAGTGTCCATTCAAGAGAGCATCGACACAAGAGTCGAGACTATGCTAGACAAGAAGGAAGATCAAGACAACCCCCCAATGGGCGCGCTCAAATTCTTGTCAGCCCTCCAACGGAAGGTCGACCCGAAAGAGATAATAGAGAAAGGGCTCATGTTTGTGGATGCAACAATAAACTCTCGACCGAGCAAGAGCACTTTGATAAACTCAGGAGCGACTCACAACTTCATCGCCAAACAAGTAGCCCGAAGATTGGGACTCACCATAGGAAAAGACCCTGGAAAAATGAAAGTTGTCAACTCCGAGGCCTTGCCTATTGTGGGAGTTTCCAAAAGAGTCCCCTTCAAATTAGGGGCTTGGACAGGAGAGCTGGACCTGGTCGTAATTCGCATAGACGACTTTGACGTGGTACTTGGGATGGAATTCCTCCTATAACACAAAGTTATCTCAATGCCACTGGTGAAATGTCTGGTGATCACCGACCGCAATCACACAGTAATACCTGCAAGCATCAAGCATCCAGGTAATCTTAGAATGATCTCAGCCATACAATTGAAAAGAGAACTCGCACGAGAGGAACCTACGTTTATGGCTATACCACTTATGGAAGAAGTGACCACTGAGGAAACTATCACAGACGAAATCAAGGAGGTATTAAACAGTTATGCTGACATATTGCTAGAGAGCCTACCACAAACATTACCACCCCGTCGAGGCATTGATCACGAAATGGAACTCCTTCCCGGGGTTAAAACCCCCAGCGAAGAACGCATACCGGATGGCTCCCCCTGAGCTAGCTGAATTGAGAAAACAACTAGATGAGTTGTTGACAGCAGAATTCATCTCCCCGGTAAAAGCAACTTACGGAGCCCCCGTATTATTTCAGAAAAAGAAGGATGAGACGTTGCATCTGTGCATAGATTATAGGGCCTTAAACAAGGTGACGGTACGCAACAAATACCCACTGTCGATAATATCCGACTTGTTCGACCAACTTCATGGGCCCAAATACTTCACAAAGTTGGACTTACGATCAAGGTACTACCAAGTACGTATCGCCGAGGGGGACGAGTCCAAGACGACGTGTGTGACAAGATATGGGGCCTTCGAGTTCCTGGTAATGCCCTTTGGCTTGACAATCGCCCCAGCTACGTTTTGCACGTTAATGAACACAACCCTAGAGGAACACAAGGTGCACTTGAAGCTGATATTTGACAAGCTGCAACAGAACCAGTCGTACATCAAGAAAGAAAAATGTGTCTTCGCACAAACATGCATCAACTTCCTCAGACATGTCATCAGTTGTGGACAGATTGGGATGGATAGCGATAAGATAAAAGCTATCCAGGAGTGGAAAGTCCCTACTTCCGTATCCGATGTGCGGTCCTTCTTAGGATTAGCAAACTACTATAGGTGA ATGTCGACGACAAAGTCGACACCCAAATCACAAGCCGATCGGCTTACATTAATAGAGGAGGAAATGTTGTTCCTCAAAGAAGCCCCTGACATCATCCGCGTCCTGGAAGCACGGGTGAAAGAATTGAGTGGGAAAGTCGTAGAGATCGACGCAATGGGTAGCCGCCTGGATGGGTTGCCAATCGCAAAATTGATGTTTCGGGTGACCTCATTCGAAGAAAAGGTTGCTCCTACGAGCAGCCCAAGACCGTCTGGTAGCCCCGATAGCTCTGTCGCACACAAGGAGGGATGTGGCGAAGAGTTCGACGTGCTACAAAATACAATGATGAGTTTGTTCAATGGATTAGCTGACGAATTCAGAACAACCATCGATGACATGCAAGAAAAGATGTTTGCCATGAACACTCGAATCGAGGTGACCATGAAAGTTGTGCAGAACGTCTCGGCTGGACAAACTAATACAGGGTTCAACAAACTGAAGTTCCCAGATCCTAGACCTTTTAAAGGGAACCGGGATGCCAAAGAGTTGGAGAACTTTATCTTTGATGTCGAACAGTACTTCAAAGCCACACCGGCCTGTACCGACGACATGAAGGTGGCAGTAGCCTCGATGTATCTCATAGACGACACCAAACTTTGGTGGCGTATGAAGGTACAAGACATCGAGAATGAATTGTGCACCATAGACTCGTGGGAAGACTTCAAGAGAGAGTTGAGGGACCTATTCCTCCCCGAAAACGTAGATTATCTAGCAATGGAAAAACTAATAGCTCTAAAGCAAACTGGAAGCATAAGGGACTATGTCAAACAATTTTCGCCCCTGATGCTAGATATTAGGGGCACATCAGAGAAGGACAAGCCGTCAGGTCACCGAAATGGAAGCCCCAACAGGCCAAACGGAGGTAACGAAAGACCAAGCGGGTGGACAGATAGACCTCCTCAGAACAACCAAGCGGAGACATCTCGAGGACCTTACCCTCAAAGGAACCACCCGATGACACCTTTACAATGCATATTGTGTAAAGGCCCCCACAAAGTGTCTTACTGTCCTCATTGGGCCTCTCTCACTGCACTCCAAGTGTCCATTCAAGAGAGCATCGACACAAGAGTCGAGACTATGCTAGACAAGAAGGAAGATCAAGACAACCCCCCAATGGGCGCGCTCAAATTCTTGTCAGCCCTCCAACGGAAGGTCGACCCGAAAGAGATAATAGAGAAAGGGCTCATGTTTGTGGATGCAACAATAAACTCTCGACCGAGCAAGAGCACTTTGATAAACTCAGGAGCGACTCACAACTTCATCGCCAAACAAGTAGCCCGAAGATTGGGACTCACCATAGGAAAAGACCCTGGAAAAATGAAAGTTGTCAACTCCGAGGCCTTGCCTATTGTGGGAGTTTCCAAAAGAGTCCCCTTCAAATTAGGGGCTTGGACAGGAGAGCTGGACCTGGTCGTAATTCGCATAGACGACTTTGACGTGAGAGCCTACCACAAACATTACCACCCCGTCGAGGCATTGATCACGAAATGGAACTCCTTCCCGGGGTTAAAACCCCCAGCGAAGAACGCATACCGGATGGCTCCCCCTGAGCTAGCTGAATTGAGAAAACAACTAGATGAGTTGTTGACAGCAGAATTCATCTCCCCGGTAAAAGCAACTTACGGAGCCCCCGTATTATTTCAGAAAAAGAAGGATGAGACGTTGCATCTGTGCATAGATTATAGGGCCTTAAACAAGGTGACGGTACGCAACAAATACCCACTGTCGATAATATCCGACTTGTTCGACCAACTTCATGGGCCCAAATACTTCACAAAGTTGGACTTACGATCAAGGTACTACCAAGTACGTATCGCCGAGGGGGACGAGTCCAAGACGACGTGTGTGACAAGATATGGGGCCTTCGAGTTCCTGGTAATGCCCTTTGGCTTGACAATCGCCCCAGCTACGTTTTGCACGTTAATGAACACAACCCTAGAGGAACACAAGGTGCACTTGAAGCTGATATTTGACAAGCTGCAACAGAACCAGTCGTACATCAAGAAAGAAAAATGTGTCTTCGCACAAACATGCATCAACTTCCTCAGACATGTCATCAGTTGTGGACAGATTGGGATGGATAGCGATAAGATAAAAGCTATCCAGGAGTGGAAAGTCCCTACTTCCGTATCCGATGTGCGGTCCTTCTTAGGATTAGCAAACTACTATAGGTGA ATGTCGACGACAAAGTCGACACCCAAATCACAAGCCGATCGGCTTACATTAATAGAGGAGGAAATGTTGTTCCTCAAAGAAGCCCCTGACATCATCCGCGTCCTGGAAGCACGGGTGAAAGAATTGAGTGGGAAAGTCGTAGAGATCGACGCAATGGGTAGCCGCCTGGATGGGTTGCCAATCGCAAAATTGATGTTTCGGGTGACCTCATTCGAAGAAAAGGTTGCTCCTACGAGCAGCCCAAGACCGTCTGGTAGCCCCGATAGCTCTGTCGCACACAAGGAGGGATGTGGCGAAGAGTTCGACGTGCTACAAAATACAATGATGAGTTTGTTCAATGGATTAGCTGACGAATTCAGAACAACCATCGATGACATGCAAGAAAAGATGTTTGCCATGAACACTCGAATCGAGGTGACCATGAAAGTTGTGCAGAACGTCTCGGCTGGACAAACTAATACAGGGTTCAACAAACTGAAGTTCCCAGATCCTAGACCTTTTAAAGGGAACCGGGATGCCAAAGAGTTGGAGAACTTTATCTTTGATGTCGAACAGTACTTCAAAGCCACACCGGCCTGTACCGACGACATGAAGGTGGCAGTAGCCTCGATGTATCTCATAGACGACACCAAACTTTGGTGGCGTATGAAGGTACAAGACATCGAGAATGAATTGTGCACCATAGACTCGTGGGAAGACTTCAAGAGAGAGTTGAGGGACCTATTCCTCCCCGAAAACGTAGATTATCTAGCAATGGAAAAACTAATAGCTCTAAAGCAAACTGGAAGCATAAGGGACTATGTCAAACAATTTTCGCCCCTGATGCTAGATATTAGGGGCACATCAGAGAAGGACAAGCCGTCAGGTCACCGAAATGGAAGCCCCAACAGGCCAAACGGAGGTAACGAAAGACCAAGCGGGTGGACAGATAGACCTCCTCAGAACAACCAAGCGGAGACATCTCGAGGACCTTACCCTCAAAGGAACCACCCGATGACACCTTTACAATGCATATTGTGTAAAGGCCCCCACAAAGTGTCTTACTGTCCTCATTGGGCCTCTCTCACTGCACTCCAAGTGTCCATTCAAGAGAGCATCGACACAAGAGTCGAGACTATGCTAGACAAGAAGGAAGATCAAGACAACCCCCCAATGGGCGCGCTCAAATTCTTGTCAGCCCTCCAACGGAAGGTCGACCCGAAAGAGATAATAGAGAAAGGGCTCATGTTTGTGGATGCAACAATAAACTCTCGACCGAGCAAGAGCACTTTGATAAACTCAGGAGCGACTCACAACTTCATCGCCAAACAAGTAGCCCGAAGATTGGGACTCACCATAGGAAAAGACCCTGGAAAAATGAAAGTTGTCAACTCCGAGGCCTTGCCTATTGTGGGAGTTTCCAAAAGAGTCCCCTTCAAATTAGGGGCTTGGACAGGAGAGCTGGACCTGGTCGTAATTCGCATAGACGACTTTGACGTGAGAGCCTACCACAAACATTACCACCCCGTCGAGGCATTGATCACGAAATGGAACTCCTTCCCGGGGTTAAAACCCCCAGCGAAGAACGCATACCGGATGGCTCCCCCTGAGCTAGCTGAATTGAGAAAACAACTAGATGAGTTGTTGACAGCAGAATTCATCTCCCCGGTAAAAGCAACTTACGGAGCCCCCGTATTATTTCAGAAAAAGAAGGATGAGACGTTGCATCTGTGCATAGATTATAGGGCCTTAAACAAGGTGACGGTACGCAACAAATACCCACTGTCGATAATATCCGACTTGTTCGACCAACTTCATGGGCCCAAATACTTCACAAAGTTGGACTTACGATCAAGGTACTACCAAGTACGTATCGCCGAGGGGGACGAGTCCAAGACGACGTGTGTGACAAGATATGGGGCCTTCGAGTTCCTGGTAATGCCCTTTGGCTTGACAATCGCCCCAGCTACGTTTTGCACGTTAATGAACACAACCCTAGAGGAACACAAGGTGCACTTGAAGCTGATATTTGACAAGCTGCAACAGAACCAGTCGTACATCAAGAAAGAAAAATGTGTCTTCGCACAAACATGCATCAACTTCCTCAGACATGTCATCAGTTGTGGACAGATTGGGATGGATAGCGATAAGATAAAAGCTATCCAGGAGTGGAAAGTCCCTACTTCCGTATCCGATGTGCGGTCCTTCTTAGGATTAGCAAACTACTATAGGTGA MSTTKSTPKSQADRLTLIEEEMLFLKEAPDIIRVLEARVKELSGKVVEIDAMGSRLDGLPIAKLMFRVTSFEEKVAPTSSPRPSGSPDSSVAHKEGCGEEFDVLQNTMMSLFNGLADEFRTTIDDMQEKMFAMNTRIEVTMKVVQNVSAGQTNTGFNKLKFPDPRPFKGNRDAKELENFIFDVEQYFKATPACTDDMKVAVASMYLIDDTKLWWRMKVQDIENELCTIDSWEDFKRELRDLFLPENVDYLAMEKLIALKQTGSIRDYVKQFSPLMLDIRGTSEKDKPSGHRNGSPNRPNGGNERPSGWTDRPPQNNQAETSRGPYPQRNHPMTPLQCILCKGPHKVSYCPHWASLTALQVSIQESIDTRVETMLDKKEDQDNPPMGALKFLSALQRKVDPKEIIEKGLMFVDATINSRPSKSTLINSGATHNFIAKQVARRLGLTIGKDPGKMKVVNSEALPIVGVSKRVPFKLGAWTGELDLVVIRIDDFDVRAYHKHYHPVEALITKWNSFPGLKPPAKNAYRMAPPELAELRKQLDELLTAEFISPVKATYGAPVLFQKKKDETLHLCIDYRALNKVTVRNKYPLSIISDLFDQLHGPKYFTKLDLRSRYYQVRIAEGDESKTTCVTRYGAFEFLVMPFGLTIAPATFCTLMNTTLEEHKVHLKLIFDKLQQNQSYIKKEKCVFAQTCINFLRHVISCGQIGMDSDKIKAIQEWKVPTSVSDVRSFLGLANYYR
BLAST of CmaCh08G004680 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3) HSP 1 Score: 159.8 bits (403), Expect = 1.1e-37 Identity = 116/389 (29.82%), Postives = 172/389 (44.22%), Query Frame = 1
BLAST of CmaCh08G004680 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2) HSP 1 Score: 156.4 bits (394), Expect = 1.2e-36 Identity = 86/244 (35.25%), Postives = 123/244 (50.41%), Query Frame = 1
BLAST of CmaCh08G004680 vs. Swiss-Prot
Match: TF27_SCHPO (Transposon Tf2-7 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-7 PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 4.8e-33 Identity = 81/241 (33.61%), Postives = 123/241 (51.04%), Query Frame = 1
BLAST of CmaCh08G004680 vs. Swiss-Prot
Match: TF28_SCHPO (Transposon Tf2-8 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-8 PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 4.8e-33 Identity = 81/241 (33.61%), Postives = 123/241 (51.04%), Query Frame = 1
BLAST of CmaCh08G004680 vs. Swiss-Prot
Match: TF211_SCHPO (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-11 PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 4.8e-33 Identity = 81/241 (33.61%), Postives = 123/241 (51.04%), Query Frame = 1
BLAST of CmaCh08G004680 vs. TrEMBL
Match: K4BL15_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 1.3e-82 Identity = 157/245 (64.08%), Postives = 184/245 (75.10%), Query Frame = 1
BLAST of CmaCh08G004680 vs. TrEMBL
Match: A5BX03_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032357 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.3e-80 Identity = 156/245 (63.67%), Postives = 179/245 (73.06%), Query Frame = 1
BLAST of CmaCh08G004680 vs. TrEMBL
Match: A5BDH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001313 PE=4 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 6.2e-80 Identity = 154/246 (62.60%), Postives = 177/246 (71.95%), Query Frame = 1
BLAST of CmaCh08G004680 vs. TrEMBL
Match: A0A087PJF6_9PROT (Uncharacterized protein OS=Acetobacter malorum GN=AmDm5_3101 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 2.4e-79 Identity = 151/246 (61.38%), Postives = 182/246 (73.98%), Query Frame = 1
BLAST of CmaCh08G004680 vs. TrEMBL
Match: A5AI18_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026741 PE=4 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 4.0e-79 Identity = 184/422 (43.60%), Postives = 241/422 (57.11%), Query Frame = 1
BLAST of CmaCh08G004680 vs. TAIR10
Match: ATMG00860.1 (ATMG00860.1 DNA/RNA polymerases superfamily protein) HSP 1 Score: 60.1 bits (144), Expect = 6.7e-09 Identity = 28/75 (37.33%), Postives = 44/75 (58.67%), Query Frame = 1
BLAST of CmaCh08G004680 vs. NCBI nr
Match: gi|658053698|ref|XP_008362604.1| (PREDICTED: uncharacterized protein LOC103426292 [Malus domestica]) HSP 1 Score: 401.0 bits (1029), Expect = 4.6e-108 Identity = 222/499 (44.49%), Postives = 304/499 (60.92%), Query Frame = 1
BLAST of CmaCh08G004680 vs. NCBI nr
Match: gi|747107859|ref|XP_011102243.1| (PREDICTED: uncharacterized protein LOC105180264 [Sesamum indicum]) HSP 1 Score: 365.2 bits (936), Expect = 2.8e-97 Identity = 267/741 (36.03%), Postives = 367/741 (49.53%), Query Frame = 1
BLAST of CmaCh08G004680 vs. NCBI nr
Match: gi|823127373|ref|XP_012435330.1| (PREDICTED: uncharacterized protein LOC105761945 [Gossypium raimondii]) HSP 1 Score: 363.6 bits (932), Expect = 8.1e-97 Identity = 233/664 (35.09%), Postives = 335/664 (50.45%), Query Frame = 1
BLAST of CmaCh08G004680 vs. NCBI nr
Match: gi|659114583|ref|XP_008457127.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496873 [Cucumis melo]) HSP 1 Score: 346.7 bits (888), Expect = 1.0e-91 Identity = 174/246 (70.73%), Postives = 193/246 (78.46%), Query Frame = 1
BLAST of CmaCh08G004680 vs. NCBI nr
Match: gi|1009175511|ref|XP_015868924.1| (PREDICTED: uncharacterized protein LOC107406328 [Ziziphus jujuba]) HSP 1 Score: 335.5 bits (859), Expect = 2.4e-88 Identity = 165/246 (67.07%), Postives = 188/246 (76.42%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |