CmaCh08G004510 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAATCTCGTCTCAATTTACTTCACTTTCCTCCTCTTCACACTCTCTAAATTTTCCTTTCTCTCATCGGCGACCGCCGTGGCCAAGGATCAGGTCGGCTGTTCCATGTGCTCAAGTTGTGACAACCCCTGCCAACTCCCTCCTCCGCCACCGCCACCTCCCACGTCACAATGCCCTCCTCCGCCGCCTCCGCCTCCGCCCTCGTGCAGTACCTGCGTCCACCCTTCTCCGACGCCACCAACCTCTGTCCAGCCGTACCAGCCGGCCGATGGTGGTCAATTCCCCGGCCTTGCTCCTCCGCCGCCGCCGAATCCAATTTTACCATATTATCCTTACTATTATTACAGTCCCCCCACTGCTTCTGGCGAAAGCGTTTCAATTTCATGGAAAATTTTGCCTTTGGGTCTCTTAATCATTATTTGTCTCTGAAGAACTCTGAATTCTCCATTGCTGACAGAGAAGAAATGGGTTGTGCTGATTATCAATTTATGCCATAA ATGGCGAATCTCGTCTCAATTTACTTCACTTTCCTCCTCTTCACACTCTCTAAATTTTCCTTTCTCTCATCGGCGACCGCCGTGGCCAAGGATCAGGTCGGCTGTTCCATGTGCTCAAGTTGTGACAACCCCTGCCAACTCCCTCCTCCGCCACCGCCACCTCCCACGTCACAATGCCCTCCTCCGCCGCCTCCGCCTCCGCCCTCGTGCAGTACCTGCGTCCACCCTTCTCCGACGCCACCAACCTCTGTCCAGCCGTACCAGCCGGCCGATGGTGGTCAATTCCCCGGCCTTGCTCCTCCGCCGCCGCCGAATCCAATTTTACCATATTATCCTTACTATTATTACAGTCCCCCCACTGCTTCTGGCGAAAGCAACTCTGAATTCTCCATTGCTGACAGAGAAGAAATGGGTTGTGCTGATTATCAATTTATGCCATAA ATGGCGAATCTCGTCTCAATTTACTTCACTTTCCTCCTCTTCACACTCTCTAAATTTTCCTTTCTCTCATCGGCGACCGCCGTGGCCAAGGATCAGGTCGGCTGTTCCATGTGCTCAAGTTGTGACAACCCCTGCCAACTCCCTCCTCCGCCACCGCCACCTCCCACGTCACAATGCCCTCCTCCGCCGCCTCCGCCTCCGCCCTCGTGCAGTACCTGCGTCCACCCTTCTCCGACGCCACCAACCTCTGTCCAGCCGTACCAGCCGGCCGATGGTGGTCAATTCCCCGGCCTTGCTCCTCCGCCGCCGCCGAATCCAATTTTACCATATTATCCTTACTATTATTACAGTCCCCCCACTGCTTCTGGCGAAAGCAACTCTGAATTCTCCATTGCTGACAGAGAAGAAATGGGTTGTGCTGATTATCAATTTATGCCATAA MANLVSIYFTFLLFTLSKFSFLSSATAVAKDQVGCSMCSSCDNPCQLPPPPPPPPTSQCPPPPPPPPPSCSTCVHPSPTPPTSVQPYQPADGGQFPGLAPPPPPNPILPYYPYYYYSPPTASGESNSEFSIADREEMGCADYQFMP
BLAST of CmaCh08G004510 vs. TrEMBL
Match: A0A0A0K5N4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G405965 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 1.3e-40 Identity = 98/144 (68.06%), Postives = 111/144 (77.08%), Query Frame = 1
BLAST of CmaCh08G004510 vs. TrEMBL
Match: A0A067JWJ5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13988 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.8e-15 Identity = 70/159 (44.03%), Postives = 89/159 (55.97%), Query Frame = 1
BLAST of CmaCh08G004510 vs. TrEMBL
Match: A0A022S3E3_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014805mg PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.7e-11 Identity = 65/156 (41.67%), Postives = 81/156 (51.92%), Query Frame = 1
BLAST of CmaCh08G004510 vs. TrEMBL
Match: F6HZ82_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g01070 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.3e-10 Identity = 64/136 (47.06%), Postives = 76/136 (55.88%), Query Frame = 1
BLAST of CmaCh08G004510 vs. TrEMBL
Match: V4S724_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005954mg PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.3e-10 Identity = 66/176 (37.50%), Postives = 88/176 (50.00%), Query Frame = 1
BLAST of CmaCh08G004510 vs. TAIR10
Match: AT4G16140.1 (AT4G16140.1 proline-rich family protein) HSP 1 Score: 65.1 bits (157), Expect = 4.1e-11 Identity = 61/144 (42.36%), Postives = 76/144 (52.78%), Query Frame = 1
BLAST of CmaCh08G004510 vs. TAIR10
Match: AT5G49280.1 (AT5G49280.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 63.2 bits (152), Expect = 1.6e-10 Identity = 61/145 (42.07%), Postives = 78/145 (53.79%), Query Frame = 1
BLAST of CmaCh08G004510 vs. TAIR10
Match: AT3G06750.1 (AT3G06750.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08 Identity = 50/117 (42.74%), Postives = 65/117 (55.56%), Query Frame = 1
BLAST of CmaCh08G004510 vs. NCBI nr
Match: gi|700189757|gb|KGN44990.1| (hypothetical protein Csa_7G405965 [Cucumis sativus]) HSP 1 Score: 174.1 bits (440), Expect = 1.8e-40 Identity = 98/144 (68.06%), Postives = 111/144 (77.08%), Query Frame = 1
BLAST of CmaCh08G004510 vs. NCBI nr
Match: gi|802700677|ref|XP_012083797.1| (PREDICTED: leucine-rich repeat extensin-like protein 1 [Jatropha curcas]) HSP 1 Score: 90.5 bits (223), Expect = 2.6e-15 Identity = 70/159 (44.03%), Postives = 89/159 (55.97%), Query Frame = 1
BLAST of CmaCh08G004510 vs. NCBI nr
Match: gi|1000974909|ref|XP_015572337.1| (PREDICTED: extensin-2 [Ricinus communis]) HSP 1 Score: 85.5 bits (210), Expect = 8.4e-14 Identity = 64/143 (44.76%), Postives = 82/143 (57.34%), Query Frame = 1
BLAST of CmaCh08G004510 vs. NCBI nr
Match: gi|729421692|ref|XP_010558434.1| (PREDICTED: formin-A-like [Tarenaya hassleriana]) HSP 1 Score: 79.7 bits (195), Expect = 4.6e-12 Identity = 60/132 (45.45%), Postives = 74/132 (56.06%), Query Frame = 1
BLAST of CmaCh08G004510 vs. NCBI nr
Match: gi|848850707|ref|XP_012833992.1| (PREDICTED: leucine-rich repeat extensin-like protein 6 [Erythranthe guttata]) HSP 1 Score: 76.6 bits (187), Expect = 3.9e-11 Identity = 65/156 (41.67%), Postives = 81/156 (51.92%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |