CmaCh08G001060 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh08G001060
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRibosome inactivating protein
LocationCma_Chr08 : 563825 .. 569548 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATGGGAAGAAATTTTGAAGGTGATTTTTCCGTTGCTGGAAGGTGTGGACCTTGCTTCCTGCATGGCAGTGTGCAAGCAGTGGAGAGACATAGCTCGAGATGATTTCTTTTGGAAATGTTTGTGCGCCAAGAAGTGGCCTTCAACCTGCAAAAATCCCGATCCTCCTACCAATACCTACTATAAATTATATCAAAACTTTTACAAACGTCCCAATAATCGACGTCTTCTCCCTCCTCGACTTTCCTTTGATGATCTAGAGTTTTTTATTGACATTTGGAGTGAAGACAGATTAATCTTCTCAGAAGTAGTTGCAGGTCAAGTCCTCCAGAGTGGTATGAAGCCACCACCTGGTACTAGTAATGTGATTAATTATCACCTAGAAGCCCCAGAGTTCAAGATGACACTACCTGTTCAGCCAAGGTTCTCAATTCCTATATCCCATACTGTGAGCGTATCCGTGCTTGTAGGACGCAAGGATTCCAATAAAGTTGCTCGTATAGTCAACAAATCTGTATTTGATTACATTGATCGAACATCATACAGGACACTGGCTTTTGACTACCTTGATTTTTCACCTCTCTACCCATTTGTCTCCGGAATCCGAGCATGGATCTCATTGCTTTTCTTGGACGATGGAAATGATGGCATAATTGATGTTTTTGGAATTGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTATTATGGCTTTTGGACTTGCTTGATTGGAAATGAAGGGTTGACATTTTCTGGGAAAGAACATTCAAAAAGAGTTGGGCCACATGTTGGTCACCAAGTATGAAACTCTCACATCGTTGCTGAAACCGTCGCCCTGATTTTTCTGGTATCAATTATTACCTTACTTGTTTATTGTCACTGTACATAATTTTTCAACTCCTTTCATCAATAAATATGAATGATTTTCTTTTCAAGAACTTATGTTTTTGTAGTTTATGTGAATCACCTGCATTTTGAGTCAGACTTAAGAGCCATTTTCTATATTGCTAGGCTTATTTCTTAGCAATATATGTATGTACATGTGTTTGTCACACTATGTAGTCTGTAGGAACCGAAGCTAGGGGAGATCATAGCCGCTCTCGTAGGAAGGATTAGAGCCAGTCCATTCATTAACATGACTTGTTTTATACATTGTTAGAGCAAGATAGTGCAATAAGAAAGAGGGGGGAAAAAAAAAAGCCAAAGAACATGCCTTGCCCACCAATTATTTGTCAATGTCGTCAAGGAAAATCTGTATCCGAGTGGCCTATGGATGCGAAATTAGGAGCTACTTTAATTTATAAACCATGGCATAGAGAACCTTTAAGATAGTGTAAGATATGGTTGAGAACTTGATAAACCCGAGTTGCAGAAAATCAGAGTAGGGTGATTTATATAAGAACACCATCTGTTGTTGTTTACAAGGTTTTCCTTGTGGCAATGGGTGATGGGGATGGTTAAATATTGTGTATCGAGCTAAGCTAGCTTGTAAATTAGTGATATACTTGGGTTGAGTTAAGATAATCCCTAAACTATCCTTGGGAACTTAGATTCTTACAATATTACAAGGACCACCAATGTCATTGATTGTATATTTTGATGGTAGCTTTTTTTAAACATCATAGAGTTTAAGTTAAGCTGATGACAGTTATAGTGTACTTTCATAGATGGCTATAAACATCATGCCATATGAAGAGAAATAAAGGCATATTGGACTTGGATGGAATGGAATTGGAAAATTGTAATGGGTGTCAAAATTGGTTGGATTATTTGCAACTATGCCAAACGTCCTATTCTTCTGTAATTTCGTTTTCTAACCCATCTATCACGTATTGGTGGACATTTATCATTGGTAGAGCATTTTTACATCTGTCACTAATTGACTATTTCTATGACCATCATTGATATAGATGTTTAACATTGCTAGATGTCTACCATGAATTGATCGTTTTCATGTTTATTATTGAGAACCAATTTTTATGTTTATTCTATCAATAGTAAACTCTTTTATGCTTATTACCATTCATTTTTATGTGTTTGATACACAAAAACCTATTATTGACATACTATTCCTACGCCTATCAATGATAGATATCTATTAGTGATACATATTGGCGTAACAAATTATATTATGTGTATATTTGTATACAACAACAAGGGTTAGCATGCCCATTGATCATTGCATTGTAATTTGAGGCGAAGCTTGTGAGGTTCTAGGCGCCTTTGGGCGATATTGTGGCTTTCTAGAAGATTCACATTTGAGTCTCAAGAGCTTTTTTTTTTTTTTGGAGATTTGTGATAGTTTATTATTCCTTGAGTGTCTGTTATTGTTATTCCTTTATTTGGTTCTTGATAATCCCTTTGCAAGAACTCTTTTCCTGCCTGAATTATCCCATCTTGGGATGACTTTGGAGAGAGTTTCTTAATCAAGTATTTTCTACCAATGATGTAAAGGATATCATGACATTTAAGTAATGTGAGAATGAATCACTCAGGGATCCGTATGTGAGGTTTAGAAAGTTGTAGCAAAAAATGTGGTTTGCCCTATTGTGTACAGTTAGAAATGCTTCAGAAAAGTTCGAACATAGATCGAGATTAGAATCACTCCACAAGGAATGATATGCCTCCGTTTATACCACATGGTCTCACCAACCTCAAGTGGTATATGTTGTCTTTAAGCATTTGGAGCTTTGATAGGAAAAGTGAATCTAGAACTTTGGAACTAAAAACATAGTAGGCGGTCCCAAGGAAAATTTCTTATTTGGATTAGTGATAAGACAATTGTCGTAATTACATACAAAATTTACCGATTGCAACCGAGCTTTGTGGCACTATTCGAGGACAAGCAATGATTCAAGTTTGGGGTTTGATACCTTGTAGATATGCAAGTTATTTAGGTAGTATTCTCTTTGAGAATGAATTCTATGCATTTATCGAGATTTTACTGTTTTTACTGTGAAATCATGTCTAATTCATCCGTTTGCATAACTATGATAGGTAATAGTTAAATTATAAGACTGTAATTTTATAAGCTCTGAAGGACTAAATAATGGTTCGATCTTGTCTGTTTCTTTGAATGATTACGACAATTTTATATAAAAGTATTTGGAAGTATCAATAGAATGAAAGATGATTTCTACTTTAGAACATATATTCCTTCTCACAAGTTTAGATACTTTCGTTAAGAACAAGAGAGAGAAAACGTGCTTCAACATGTGAATCCTATCTCTCCATTCATACATCAATATCATGTCTTTATCAAAATTGGTTGTACCAATAATTCCAAGAGATGCGAAAAGTTGTGGAGGGTTATTAATGGTATCCCATGGTATGTAGTTCTCTTCGTACATTGTTTTAGTTAAATTATATGTTTAGAGATTTTGTTAAATAGATTTATTAAGCTTGTGTTTAGATGGTACAAAAAGTAGATATGTTAAATTTAAATATTGAACTATCTTGTATTCTCCATTCACCTGTTACAGGTTGGGATTCGAATTCCCGTTATCCACGACGAAGAAGACGGATTCAAACTTGATATGTCTTGCTTTCATGAAGAACAAGTATGTTCTTCGTGCTTGCGAAACAAAATTGTTGATACTTTATGGGAACTTCTCAGCAAGTTCCTCAATATCATCCCTCCTTGGGACCATTATGCTCCTTCAGGTATTCTCGTATCCGAAGGATACGGTGCTTGAAAATATACATACACGAATGGTTCCTAGACATGGACCACACAGGAAACAGAAAAGTATACTATACTCTTAGATGGCTCCTTAAAAACCACAGCTTGTGATGCTCCAATGGCATCCAAAATCCTGAAGTGGAAAAGGTTACACTTGCATATTCTGGCAATTACGAGAGACTTCAAGACGCTGCAGGCAAAACAAGGGTATTCTGCTTTGGCTCCCAGCTTTGACAGTGCCATTACCACCTTGTTTTACTGCAATGGCAATCCTAGTGACAGCACTTCTTGCTAGATCTCATGCTAGATCTCATGTAGATCTCATGGAGACCGTAGAGGAGAACGAAACATTCTTTATAGAAACCTCTCCCTAGCAGATACGTTTTAGAAATCTTTAGGGGAAGCTCAAAAGAGAAAGTTCAAAGAGGACAATATCTACTAGTGGTGGGCTTAGACGGTTACAAATGGTATCAGAGCCAGACACCGAGCGGTGTGCCAGCGAGGACGTTGGATTCTAAAAGGGGGTGGATTGTGAGATCCCACATCGATTGGAGAAGGTAACAAAACATTCTTTATAAGGGTATGGAAACATCTTTCTAACAGACGCGTTTTAAAAACTTTTAGAGGAAGCCCAAAAGGGAAAGCCCGAAAAGAATAATATTTGATAGCGATGGGTTTGTGTTGTTATACTTAGTCGACAACTGAGTCTACGAGGTATAAATTTATCGAGCAACAAATTGGCAAGCATGTTGAGCAATTATAAGTCTGAAAAATAGTTGGTCTGCTCTTTCCAAGCAAATATAAATGGAGAATTTCGTGAGAATGAGAACTGAAATAGGTGTTGGGGACGAGAAAGCTTTATTTATCCCCGTCCCGTGATATCTCTACAACCTGTATTGGTCAAGTAAAAAAGTAAAAAAGAAATGGTAAATCAAGATAAGATATTGATTGGTGGGAGAGTGAATGAAGAAAATATCTAGTGCCACCCCCTTGTTAATATAAACTATAGGGGGGGAGATGATCAAATGACATCCAAACCCATCAACTCAAAAAAGATGAACAAATCCTTAGCCCTTTCGTTTCTATTTCTCGCCATCTTCCTCAACACTCGTCCTGCTGATGCCAATGTGCGTTTCGACTTGTCTGGTGCCACAAGCTCATCTTACAAAACTTTTATAAAAAATTTGAGGGAAGCACTTCCAAAGGATGGGAAAGTGTATGATATTTCTGTGTTACTTTCGACTGTAATGGACTCAAAGCGCTTCATACTAATAGATCTTGTCAATTACGACGGTCAATCCATCACAGCTGCCATAGATGTGCTAAACGTTTATATCGTGGCATACAGCACAGGCACCGTGTCCTACTTTTTTCAGCAAATTCCAGCTCAAGCTCCCAAATTGCTGTTCAAAGGCACTCAGCAAAGGACACTTCCATATACAGGTAATTACGAGAACCTTCAAACTGCTGCAAAAAAACTAAGAGAAAACATCGAGCTTGGACTCCCAGCTCTAGACAGTGCCATTACTACCTTGTTTCATTACAACGCCGAGGCTGCTGCTTCAGCGCTGCTCGTTCTCATTCAAACGACCTCTGAAGCTGCAAGGTTTAGATATATCGAGCTACAGATTGCTAACAATGTTGGGACGAAATTTAAGCCAAGTCAAACGATCATAAGCTTGGAAAACAACTGGTCTGCGCTCTCCAAACAAATCCAAATTGCCAAGAACAAAAATGGGCAATTTGAAACTCCAGTTATCCTTATAGACCCTCAAGGAAATCGTGTTCAAATAACAAACGTTACTTCAAACGTCGTGACCCAAAACATCAAGCTTCTGTTGAACATTGGTGCAACTGTTGGTACTGGCGATGGTATCCCTGTCGCATTAATGCCTCCTAAACCTGATACTACGGCCGCCAATGATGTAGATGAGGTGACGAGCGGTGTTCCCATAAGGCTATCAAGCTGTGGCCATGAGATGGAAAGGAAGTCAGTGCAGAATGGCCGGCATGCAAATTATGTATCGGTGTAA

mRNA sequence

ATGAGATGGGAAGAAATTTTGAAGGTGATTTTTCCGTTGCTGGAAGGTGTGGACCTTGCTTCCTGCATGGCAGTGTGCAAGCAGTGGAGAGACATAGCTCGAGATGATTTCTTTTGGAAATGTTTGTGCGCCAAGAAGTGGCCTTCAACCTGCAAAAATCCCGATCCTCCTACCAATACCTACTATAAATTATATCAAAACTTTTACAAACGTCCCAATAATCGACGTCTTCTCCCTCCTCGACTTTCCTTTGATGATCTAGAGTTTTTTATTGACATTTGGAGTGAAGACAGATTAATCTTCTCAGAAGTAGTTGCAGGTCAAGTCCTCCAGAGTGGTATGAAGCCACCACCTGGTACTAGTAATGTGATTAATTATCACCTAGAAGCCCCAGAGTTCAAGATGACACTACCTGTTCAGCCAAGGTTCTCAATTCCTATATCCCATACTGTGAGCGTATCCGTGCTTGTAGGACGCAAGGATTCCAATAAAGTTGCTCGTATAGTCAACAAATCTGTATTTGATTACATTGATCGAACATCATACAGGACACTGGCTTTTGACTACCTTGATTTTTCACCTCTCTACCCATTTGTCTCCGGAATCCGAGCATGGATCTCATTGCTTTTCTTGGACGATGGAAATGATGGCATAATTGATGTTTTTGGAATTGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTTGGGATTCGAATTCCCGTTATCCACGACGAAGAAGACGGATTCAAACTTGATATGTCTTGCTTTCATGAAGAACAAGTATGTTCTTCGTGCTTGCGAAACAAAATTGTTGATACTTTATGGGAACTTCTCAGCAAGTTCCTCAATATCATCCCTCCTTGGGACCATTATGCTCCTTCAGCTTGTGATGCTCCAATGGCATCCAAAATCCTGAAGTGGAAAAGGTTACACTTGCATATTCTGGCAATTACGAGAGACTTCAAGACGCTGCAGGCAAAACAAGGGGGGGGAGATGATCAAATGACATCCAAACCCATCAACTCAAAAAAGATGAACAAATCCTTAGCCCTTTCGTTTCTATTTCTCGCCATCTTCCTCAACACTCGTCCTGCTGATGCCAATGTGCGTTTCGACTTGTCTGGTGCCACAAGCTCATCTTACAAAACTTTTATAAAAAATTTGAGGGAAGCACTTCCAAAGGATGGGAAAGTGTATGATATTTCTGTGTTACTTTCGACTGTAATGGACTCAAAGCGCTTCATACTAATAGATCTTGTCAATTACGACGGTCAATCCATCACAGCTGCCATAGATGTGCTAAACGTTTATATCGTGGCATACAGCACAGGCACCGTGTCCTACTTTTTTCAGCAAATTCCAGCTCAAGCTCCCAAATTGCTGTTCAAAGGCACTCAGCAAAGGACACTTCCATATACAGGTAATTACGAGAACCTTCAAACTGCTGCAAAAAAACTAAGAGAAAACATCGAGCTTGGACTCCCAGCTCTAGACAGTGCCATTACTACCTTGTTTCATTACAACGCCGAGGCTGCTGCTTCAGCGCTGCTCGTTCTCATTCAAACGACCTCTGAAGCTGCAAGGTTTAGATATATCGAGCTACAGATTGCTAACAATGTTGGGACGAAATTTAAGCCAAGTCAAACGATCATAAGCTTGGAAAACAACTGGTCTGCGCTCTCCAAACAAATCCAAATTGCCAAGAACAAAAATGGGCAATTTGAAACTCCAGTTATCCTTATAGACCCTCAAGGAAATCGTGTTCAAATAACAAACGTTACTTCAAACGTCGTGACCCAAAACATCAAGCTTCTGTTGAACATTGGTGCAACTGTTGGTACTGGCGATGGTATCCCTGTCGCATTAATGCCTCCTAAACCTGATACTACGGCCGCCAATGATGTAGATGAGGTGACGAGCGGTGTTCCCATAAGGCTATCAAGCTGTGGCCATGAGATGGAAAGGAAGTCAGTGCAGAATGGCCGGCATGCAAATTATGTATCGGTGTAA

Coding sequence (CDS)

ATGAGATGGGAAGAAATTTTGAAGGTGATTTTTCCGTTGCTGGAAGGTGTGGACCTTGCTTCCTGCATGGCAGTGTGCAAGCAGTGGAGAGACATAGCTCGAGATGATTTCTTTTGGAAATGTTTGTGCGCCAAGAAGTGGCCTTCAACCTGCAAAAATCCCGATCCTCCTACCAATACCTACTATAAATTATATCAAAACTTTTACAAACGTCCCAATAATCGACGTCTTCTCCCTCCTCGACTTTCCTTTGATGATCTAGAGTTTTTTATTGACATTTGGAGTGAAGACAGATTAATCTTCTCAGAAGTAGTTGCAGGTCAAGTCCTCCAGAGTGGTATGAAGCCACCACCTGGTACTAGTAATGTGATTAATTATCACCTAGAAGCCCCAGAGTTCAAGATGACACTACCTGTTCAGCCAAGGTTCTCAATTCCTATATCCCATACTGTGAGCGTATCCGTGCTTGTAGGACGCAAGGATTCCAATAAAGTTGCTCGTATAGTCAACAAATCTGTATTTGATTACATTGATCGAACATCATACAGGACACTGGCTTTTGACTACCTTGATTTTTCACCTCTCTACCCATTTGTCTCCGGAATCCGAGCATGGATCTCATTGCTTTTCTTGGACGATGGAAATGATGGCATAATTGATGTTTTTGGAATTGTAATGGATTTCTGTGATGCTGCAAACACAAAGGATGAGGTTGGGATTCGAATTCCCGTTATCCACGACGAAGAAGACGGATTCAAACTTGATATGTCTTGCTTTCATGAAGAACAAGTATGTTCTTCGTGCTTGCGAAACAAAATTGTTGATACTTTATGGGAACTTCTCAGCAAGTTCCTCAATATCATCCCTCCTTGGGACCATTATGCTCCTTCAGCTTGTGATGCTCCAATGGCATCCAAAATCCTGAAGTGGAAAAGGTTACACTTGCATATTCTGGCAATTACGAGAGACTTCAAGACGCTGCAGGCAAAACAAGGGGGGGGAGATGATCAAATGACATCCAAACCCATCAACTCAAAAAAGATGAACAAATCCTTAGCCCTTTCGTTTCTATTTCTCGCCATCTTCCTCAACACTCGTCCTGCTGATGCCAATGTGCGTTTCGACTTGTCTGGTGCCACAAGCTCATCTTACAAAACTTTTATAAAAAATTTGAGGGAAGCACTTCCAAAGGATGGGAAAGTGTATGATATTTCTGTGTTACTTTCGACTGTAATGGACTCAAAGCGCTTCATACTAATAGATCTTGTCAATTACGACGGTCAATCCATCACAGCTGCCATAGATGTGCTAAACGTTTATATCGTGGCATACAGCACAGGCACCGTGTCCTACTTTTTTCAGCAAATTCCAGCTCAAGCTCCCAAATTGCTGTTCAAAGGCACTCAGCAAAGGACACTTCCATATACAGGTAATTACGAGAACCTTCAAACTGCTGCAAAAAAACTAAGAGAAAACATCGAGCTTGGACTCCCAGCTCTAGACAGTGCCATTACTACCTTGTTTCATTACAACGCCGAGGCTGCTGCTTCAGCGCTGCTCGTTCTCATTCAAACGACCTCTGAAGCTGCAAGGTTTAGATATATCGAGCTACAGATTGCTAACAATGTTGGGACGAAATTTAAGCCAAGTCAAACGATCATAAGCTTGGAAAACAACTGGTCTGCGCTCTCCAAACAAATCCAAATTGCCAAGAACAAAAATGGGCAATTTGAAACTCCAGTTATCCTTATAGACCCTCAAGGAAATCGTGTTCAAATAACAAACGTTACTTCAAACGTCGTGACCCAAAACATCAAGCTTCTGTTGAACATTGGTGCAACTGTTGGTACTGGCGATGGTATCCCTGTCGCATTAATGCCTCCTAAACCTGATACTACGGCCGCCAATGATGTAGATGAGGTGACGAGCGGTGTTCCCATAAGGCTATCAAGCTGTGGCCATGAGATGGAAAGGAAGTCAGTGCAGAATGGCCGGCATGCAAATTATGTATCGGTGTAA

Protein sequence

MRWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNTYYKLYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGMKPPPGTSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEVGIRIPVIHDEEDGFKLDMSCFHEEQVCSSCLRNKIVDTLWELLSKFLNIIPPWDHYAPSACDAPMASKILKWKRLHLHILAITRDFKTLQAKQGGGDDQMTSKPINSKKMNKSLALSFLFLAIFLNTRPADANVRFDLSGATSSSYKTFIKNLREALPKDGKVYDISVLLSTVMDSKRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQIPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIKLLLNIGATVGTGDGIPVALMPPKPDTTAANDVDEVTSGVPIRLSSCGHEMERKSVQNGRHANYVSV
Homology
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BLAST of CmaCh08G001060 vs. Swiss-Prot
Match: RIP_CUCMO (Ribosome-inactivating protein cucurmosin OS=Cucurbita moschata PE=1 SV=2)

HSP 1 Score: 456.4 bits (1173), Expect = 5.2e-127
Identity = 239/244 (97.95%), Postives = 242/244 (99.18%), Query Frame = 1 

Query: 371 NVRFDLSGATSSSYKTFIKNLREALPKDGKVYDISVLLSTVMDSKRFILIDLVNYDGQSI 430
           NVRFDLS ATSSSYKTFIKNLREALPKDGKVYDI VLLSTVMDS+RFILIDLVNYDGQSI
Sbjct: 1   NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 60

Query: 431 TAAIDVLNVYIVAYSTGTVSYFFQQIPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 490
           TAAIDVLNVYIVAYSTGTVSYFFQQ+PAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR
Sbjct: 61  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 120

Query: 491 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 550
           ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS
Sbjct: 121 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 180

Query: 551 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIKLLLN 610
           QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNI+LLLN
Sbjct: 181 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQLLLN 240

Query: 611 IGAT 615
           IGAT
Sbjct: 241 IGAT 244

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BLAST of CmaCh08G001060 vs. Swiss-Prot
Match: FB270_ARATH (F-box protein At5g39250 OS=Arabidopsis thaliana GN=At5g39250 PE=2 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.4e-92
Identity = 160/239 (66.95%), Postives = 196/239 (82.01%), Query Frame = 1 

Query: 4   EEILKVIFPLLEGVDLASCMAVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNTYYK 63
           EE+LK +FPLLEG DLASCM VCKQWRDIARDDF+WKC CAKKWPS CK   PPT TYYK
Sbjct: 4   EEVLKNVFPLLEGEDLASCMGVCKQWRDIARDDFYWKCQCAKKWPSVCKRHKPPTETYYK 63

Query: 64  LYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGMKP-PPGTSN 123
           +YQ F KR  NR L PPRLSF++LEFFIDIWSE+RL+FS ++ G  L++G++  P G SN
Sbjct: 64  MYQTFSKRRLNRALPPPRLSFENLEFFIDIWSEERLVFSGLIPGVALENGIETLPLGISN 123

Query: 124 VINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSY 183
           V+  HL  P++KM +P +PRF+IP++ +VSVSVLV R DS+KVARI+N+SVFDYIDR+SY
Sbjct: 124 VLRTHLGRPDYKMVVPAEPRFTIPLNQSVSVSVLVARNDSDKVARIINRSVFDYIDRSSY 183

Query: 184 RTLAFDYLDFSPLYPFVSGIRAWISLLFL---DDGNDGIIDVFGIVMDFCDAANTKDEV 239
           R LAF+YLD SP YPF+SGIRAWISLLF+   D  +DG++DVFGI +DF D A+TK+EV
Sbjct: 184 RALAFEYLDLSPCYPFISGIRAWISLLFMDVEDMNDDGLLDVFGIQLDFNDVADTKEEV 242

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BLAST of CmaCh08G001060 vs. Swiss-Prot
Match: RIP2_MOMBA (Ribosome-inactivating protein momordin II OS=Momordica balsamina PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.7e-83
Identity = 166/267 (62.17%), Postives = 204/267 (76.40%), Query Frame = 1 

Query: 348 MNKSLALSFLFLAIFLNTRPADANVRFDLSGATSSSYKTFIKNLREALPKDGKVYDISVL 407
           M K L LSFL +AIF+    A  +V FDLS AT+ +Y  FI++ R  LP   KVYDI +L
Sbjct: 1   MVKCLLLSFLIIAIFIGVPTAKGDVNFDLSTATAKTYTKFIEDFRATLPFSHKVYDIPLL 60

Query: 408 LSTVMDSKRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQIPAQAPKLLFKG 467
            ST+ DS+RFIL+DL +Y  ++I+ AIDV NVY+VAY T  VSYFF++ P +A  +LFKG
Sbjct: 61  YSTISDSRRFILLDLTSYAYETISVAIDVTNVYVVAYRTRDVSYFFKESPPEAYNILFKG 120

Query: 468 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 527
           T++ TLPYTGNYENLQTAA K+RENI+LGLPAL SAITTLF+YNA++A SALLVLIQTT+
Sbjct: 121 TRKITLPYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYNAQSAPSALLVLIQTTA 180

Query: 528 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 587
           EAARF+YIE  +A  V T FKP+  IISLEN WSALSKQI +A+N+ G+F  PV LI P 
Sbjct: 181 EAARFKYIERHVAKYVATNFKPNLAIISLENQWSALSKQIFLAQNQGGKFRNPVDLIKPT 240

Query: 588 GNRVQITNVTSNVVTQNIKLLLNIGAT 615
           G R Q+TNV S+VV  NIKLLLN  A+
Sbjct: 241 GERFQVTNVDSDVVKGNIKLLLNSRAS 267

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BLAST of CmaCh08G001060 vs. Swiss-Prot
Match: RIP3_MOMCH (Ribosome-inactivating protein beta-momorcharin OS=Momordica charantia GN=MAP30 PE=1 SV=2)

HSP 1 Score: 309.3 bits (791), Expect = 1.0e-82
Identity = 165/267 (61.80%), Postives = 204/267 (76.40%), Query Frame = 1 

Query: 348 MNKSLALSFLFLAIFLNTRPADANVRFDLSGATSSSYKTFIKNLREALPKDGKVYDISVL 407
           M K L LSFL +AIF+    A  +V FDLS AT+ +Y  FI++ R  LP   KVYDI +L
Sbjct: 1   MVKCLLLSFLIIAIFIGVPTAKGDVNFDLSTATAKTYTKFIEDFRATLPFSHKVYDIPLL 60

Query: 408 LSTVMDSKRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQIPAQAPKLLFKG 467
            ST+ DS+RFIL++L +Y  ++I+ AIDV NVY+VAY T  VSYFF++ P +A  +LFKG
Sbjct: 61  YSTISDSRRFILLNLTSYAYETISVAIDVTNVYVVAYRTRDVSYFFKESPPEAYNILFKG 120

Query: 468 TQQRTLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTS 527
           T++ TLPYTGNYENLQTAA K+RENI+LGLPAL SAITTLF+YNA++A SALLVLIQTT+
Sbjct: 121 TRKITLPYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYNAQSAPSALLVLIQTTA 180

Query: 528 EAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQ 587
           EAARF+YIE  +A  V T FKP+  IISLEN WSALSKQI +A+N+ G+F  PV LI P 
Sbjct: 181 EAARFKYIERHVAKYVATNFKPNLAIISLENQWSALSKQIFLAQNQGGKFRNPVDLIKPT 240

Query: 588 GNRVQITNVTSNVVTQNIKLLLNIGAT 615
           G R Q+TNV S+VV  NIKLLLN  A+
Sbjct: 241 GERFQVTNVDSDVVKGNIKLLLNSRAS 267

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BLAST of CmaCh08G001060 vs. Swiss-Prot
Match: RIPT_TRIKI (Ribosome-inactivating protein alpha-trichosanthin OS=Trichosanthes kirilowii PE=1 SV=2)

HSP 1 Score: 293.5 bits (750), Expect = 5.9e-78
Identity = 163/278 (58.63%), Postives = 200/278 (71.94%), Query Frame = 1 

Query: 348 MNKSLALSFLFLAIFLNTRPADANVRFDLSGATSSSYKTFIKNLREALPKDGKVYDISVL 407
           M + L LS L L +FL T   + +V F LSGATSSSY  FI NLR+ALP + K+YDI +L
Sbjct: 1   MIRFLVLSLLILTLFLTTPAVEGDVSFRLSGATSSSYGVFISNLRKALPNERKLYDIPLL 60

Query: 408 LSTVMDSKRFILIDLVNYDGQSITAAIDVLNVYIVAYSTGTVSYFFQQIPA-QAPKLLFK 467
            S++  S+R+ LI L NY  ++I+ AIDV NVYI+ Y  G  SYFF +  A +A K +FK
Sbjct: 61  RSSLPGSQRYALIHLTNYADETISVAIDVTNVYIMGYRAGDTSYFFNEASATEAAKYVFK 120

Query: 468 GTQQR-TLPYTGNYENLQTAAKKLRENIELGLPALDSAITTLFHYNAEAAASALLVLIQT 527
              ++ TLPY+GNYE LQTAA K+RENI LGLPALDSAITTLF+YNA +AASAL+VLIQ+
Sbjct: 121 DAMRKVTLPYSGNYERLQTAAGKIRENIPLGLPALDSAITTLFYYNANSAASALMVLIQS 180

Query: 528 TSEAARFRYIELQIANNVGTKFKPSQTIISLENNWSALSKQIQIAKNKNGQFETPVILID 587
           TSEAAR+++IE QI   V   F PS  IISLEN+WSALSKQIQIA   NGQFE+PV+LI+
Sbjct: 181 TSEAARYKFIEQQIGKRVDKTFLPSLAIISLENSWSALSKQIQIASTNNGQFESPVVLIN 240

Query: 588 PQGNRVQITNVTSNVVTQNIKLLLNIGATVGTGDGIPV 624
            Q  RV ITNV + VVT NI LLLN        D +P+
Sbjct: 241 AQNQRVTITNVDAGVVTSNIALLLNRNNMAAMDDDVPM 278

[Close]
BLAST of CmaCh08G001060 vs. TrEMBL
Match: D0VWS7_CUCMO (rRNA N-glycosidase OS=Cucurbita moschata PE=1 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 5.8e-125
Identity = 239/244 (97.95%), Postives = 242/244 (99.18%), Query Frame = 1 

Query: 371 NVRFDLSGATSSSYKTFIKNLREALPKDGKVYDISVLLSTVMDSKRFILIDLVNYDGQSI 430
           NVRFDLS ATSSSYKTFIKNLREALPKDGKVYDI VLLSTVMDS+RFILIDLVNYDGQSI
Sbjct: 1   NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 60

Query: 431 TAAIDVLNVYIVAYSTGTVSYFFQQIPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 490
           TAAIDVLNVYIVAYSTGTVSYFFQQ+PAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR
Sbjct: 61  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 120

Query: 491 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 550
           ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS
Sbjct: 121 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 180

Query: 551 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIKLLLN 610
           QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNI+LLLN
Sbjct: 181 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQLLLN 240

Query: 611 IGAT 615
           IGAT
Sbjct: 241 IGAT 244

[Close]
BLAST of CmaCh08G001060 vs. TrEMBL
Match: A0A0A0L6S1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017250 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 5.1e-121
Identity = 209/239 (87.45%), Postives = 224/239 (93.72%), Query Frame = 1 

Query: 1   MRWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNT 60
           M WEEILKVIFPLLEGVDLASCMAVCKQWRDIA+DD+FWKCLCAKKWPSTCK   PPT+T
Sbjct: 1   MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIAQDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGMK-PPPG 120
           YYKLY+NFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVV+G + Q+GMK PPP 
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGGIFQNGMKNPPPS 120

Query: 121 TSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDR 180
           T N+++YHLE PEFKMTL V+PRFSIPIS+TVS SVLVGRKDSNKVARIVNKSVFDYIDR
Sbjct: 121 TGNLLSYHLEVPEFKMTLTVEPRFSIPISNTVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEV 239
           TSYR LAFDYLDFSP +PFVSGIRAWISLLF+DDG+DG IDVFGIVMDFCDAANTKDEV
Sbjct: 181 TSYRALAFDYLDFSPFHPFVSGIRAWISLLFMDDGDDGAIDVFGIVMDFCDAANTKDEV 239

[Close]
BLAST of CmaCh08G001060 vs. TrEMBL
Match: A0A061EG72_THECC (F-box protein OS=Theobroma cacao GN=TCM_018725 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.2e-107
Identity = 181/239 (75.73%), Postives = 214/239 (89.54%), Query Frame = 1 

Query: 1   MRWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNT 60
           M  EE+LKV+FPLL+G+DLA+CM VCKQWRDIARDD+FW+C+CAK+WPS CK P+PPT T
Sbjct: 1   MSCEEVLKVVFPLLDGIDLAACMVVCKQWRDIARDDYFWRCVCAKRWPSICKRPNPPTVT 60

Query: 61  YYKLYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGMK-PPPG 120
           YYKLYQ FYKR + R LLPPRLSFDDLEFFIDIW+ED+LIFSEVV G VLQ+G+K PP G
Sbjct: 61  YYKLYQTFYKRQHKRTLLPPRLSFDDLEFFIDIWTEDKLIFSEVVPGPVLQTGIKIPPTG 120

Query: 121 TSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDR 180
             +++ +HLE PE+KMTLPV+PRF++P S TVSVSVLV RKDSNKVA I+NKS+FDYIDR
Sbjct: 121 ICDMLKFHLEGPEYKMTLPVEPRFTVPWSQTVSVSVLVERKDSNKVACIINKSLFDYIDR 180

Query: 181 TSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEV 239
           T+YR LAFDYLDFSP YPF+SGIRAWISLLF++DGNDG+IDVFGI MDFCDAAN+K+E+
Sbjct: 181 TAYRALAFDYLDFSPNYPFISGIRAWISLLFMEDGNDGVIDVFGIEMDFCDAANSKEEL 239

[Close]
BLAST of CmaCh08G001060 vs. TrEMBL
Match: B9SJD7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0525640 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 6.3e-103
Identity = 174/239 (72.80%), Postives = 210/239 (87.87%), Query Frame = 1 

Query: 1   MRWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNT 60
           M ++E+LK +FPLL+GVDLASCM V KQWRD ARDD+FWKCLCAK+WPS CK P+PPT T
Sbjct: 1   MSYDEVLKAVFPLLDGVDLASCMVVSKQWRDTARDDYFWKCLCAKRWPSICKRPNPPTVT 60

Query: 61  YYKLYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGMK-PPPG 120
           Y KLYQ FYKR N + LLPPRLSFDDLEFFIDIWSE++LIFSEVV G VL  G+K PPPG
Sbjct: 61  YCKLYQTFYKRQNRQTLLPPRLSFDDLEFFIDIWSEEKLIFSEVVPGPVLLGGIKVPPPG 120

Query: 121 TSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDR 180
             +++ +HLE P++KMTLPV+PR  IP+S TVSVSVLVGRKD+NKVAR++N+SVFDYIDR
Sbjct: 121 ICDILRFHLEGPDYKMTLPVEPRVKIPLSQTVSVSVLVGRKDTNKVARVINRSVFDYIDR 180

Query: 181 TSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEV 239
           T+YR++AF+YLDFSP +PFV GIRAWISLLF++DGN+G+IDVFGI MDF DAAN+++EV
Sbjct: 181 TAYRSMAFEYLDFSPAHPFVPGIRAWISLLFMEDGNEGVIDVFGIEMDFRDAANSREEV 239

[Close]
BLAST of CmaCh08G001060 vs. TrEMBL
Match: W9QIP2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021013 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.8e-102
Identity = 169/236 (71.61%), Postives = 208/236 (88.14%), Query Frame = 1 

Query: 4   EEILKVIFPLLEGVDLASCMAVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNTYYK 63
           EE+LK +FPLLEGV+LASCMAVCKQWRD+A DD+FWKCLCAK+WPS CK P PPT TYYK
Sbjct: 4   EEVLKAVFPLLEGVELASCMAVCKQWRDVALDDYFWKCLCAKRWPSICKKPKPPTVTYYK 63

Query: 64  LYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGMK-PPPGTSN 123
           LYQ FYKR  +R L PPR+SFDDL+F+IDIW+EDRL+FSEVV G +LQ+G K PP G  +
Sbjct: 64  LYQTFYKRQQSRILPPPRISFDDLDFYIDIWTEDRLLFSEVVPGPILQAGFKIPPSGICD 123

Query: 124 VINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSY 183
            + +H++ PE+KMTLP++PRF++P+S TVSVSVLV RKDSN VA ++NKSVFDY+DR++Y
Sbjct: 124 KLRFHIDGPEYKMTLPIEPRFTVPVSQTVSVSVLVERKDSNMVACVINKSVFDYVDRSAY 183

Query: 184 RTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEV 239
           R +AFD+LDFSP+YPFVSGIRAWISLLF+DDG++G+ DVFGI MDFCDAAN+K+EV
Sbjct: 184 RAMAFDFLDFSPVYPFVSGIRAWISLLFMDDGSEGVFDVFGIQMDFCDAANSKEEV 239

[Close]
BLAST of CmaCh08G001060 vs. TAIR10
Match: AT5G39250.1 (AT5G39250.1 F-box family protein)

HSP 1 Score: 341.3 bits (874), Expect = 1.4e-93
Identity = 160/239 (66.95%), Postives = 196/239 (82.01%), Query Frame = 1 

Query: 4   EEILKVIFPLLEGVDLASCMAVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNTYYK 63
           EE+LK +FPLLEG DLASCM VCKQWRDIARDDF+WKC CAKKWPS CK   PPT TYYK
Sbjct: 4   EEVLKNVFPLLEGEDLASCMGVCKQWRDIARDDFYWKCQCAKKWPSVCKRHKPPTETYYK 63

Query: 64  LYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGMKP-PPGTSN 123
           +YQ F KR  NR L PPRLSF++LEFFIDIWSE+RL+FS ++ G  L++G++  P G SN
Sbjct: 64  MYQTFSKRRLNRALPPPRLSFENLEFFIDIWSEERLVFSGLIPGVALENGIETLPLGISN 123

Query: 124 VINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDRTSY 183
           V+  HL  P++KM +P +PRF+IP++ +VSVSVLV R DS+KVARI+N+SVFDYIDR+SY
Sbjct: 124 VLRTHLGRPDYKMVVPAEPRFTIPLNQSVSVSVLVARNDSDKVARIINRSVFDYIDRSSY 183

Query: 184 RTLAFDYLDFSPLYPFVSGIRAWISLLFL---DDGNDGIIDVFGIVMDFCDAANTKDEV 239
           R LAF+YLD SP YPF+SGIRAWISLLF+   D  +DG++DVFGI +DF D A+TK+EV
Sbjct: 184 RALAFEYLDLSPCYPFISGIRAWISLLFMDVEDMNDDGLLDVFGIQLDFNDVADTKEEV 242

[Close]
BLAST of CmaCh08G001060 vs. NCBI nr
Match: gi|281185483|sp|P84531.2|RIP_CUCMO (RecName: Full=Ribosome-inactivating protein cucurmosin; AltName: Full=rRNA N-glycosidase [Cucurbita moschata])

HSP 1 Score: 456.4 bits (1173), Expect = 8.3e-125
Identity = 239/244 (97.95%), Postives = 242/244 (99.18%), Query Frame = 1 

Query: 371 NVRFDLSGATSSSYKTFIKNLREALPKDGKVYDISVLLSTVMDSKRFILIDLVNYDGQSI 430
           NVRFDLS ATSSSYKTFIKNLREALPKDGKVYDI VLLSTVMDS+RFILIDLVNYDGQSI
Sbjct: 1   NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 60

Query: 431 TAAIDVLNVYIVAYSTGTVSYFFQQIPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 490
           TAAIDVLNVYIVAYSTGTVSYFFQQ+PAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR
Sbjct: 61  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 120

Query: 491 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 550
           ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS
Sbjct: 121 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 180

Query: 551 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIKLLLN 610
           QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNI+LLLN
Sbjct: 181 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQLLLN 240

Query: 611 IGAT 615
           IGAT
Sbjct: 241 IGAT 244

[Close]
BLAST of CmaCh08G001060 vs. NCBI nr
Match: gi|209156420|pdb|3BWH|A (Chain A, Atomic Resolution Structure Of Cucurmosin, A Novel Type 1 Rip From The Sarcocarp Of Cucurbita Moschata)

HSP 1 Score: 456.4 bits (1173), Expect = 8.3e-125
Identity = 239/244 (97.95%), Postives = 242/244 (99.18%), Query Frame = 1 

Query: 371 NVRFDLSGATSSSYKTFIKNLREALPKDGKVYDISVLLSTVMDSKRFILIDLVNYDGQSI 430
           NVRFDLS ATSSSYKTFIKNLREALPKDGKVYDI VLLSTVMDS+RFILIDLVNYDGQSI
Sbjct: 1   NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 60

Query: 431 TAAIDVLNVYIVAYSTGTVSYFFQQIPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 490
           TAAIDVLNVYIVAYSTGTVSYFFQQ+PAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR
Sbjct: 61  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 120

Query: 491 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 550
           ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS
Sbjct: 121 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 180

Query: 551 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIKLLLN 610
           QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNI+LLLN
Sbjct: 181 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQLLLN 240

Query: 611 IGAT 615
           IGAT
Sbjct: 241 IGAT 244

[Close]
BLAST of CmaCh08G001060 vs. NCBI nr
Match: gi|659095831|ref|XP_008448789.1| (PREDICTED: F-box protein At5g39250 [Cucumis melo])

HSP 1 Score: 455.3 bits (1170), Expect = 1.9e-124
Identity = 214/239 (89.54%), Postives = 228/239 (95.40%), Query Frame = 1 

Query: 1   MRWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNT 60
           M WEE+LKVIFPLLEGVDLASCMAVCKQWRDIARDD+FWKCLCAKKWPSTCK   PPT+T
Sbjct: 1   MTWEEVLKVIFPLLEGVDLASCMAVCKQWRDIARDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGMK-PPPG 120
           YYKLY+NFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSE V+G++LQ+GMK PPPG
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEAVSGRILQNGMKSPPPG 120

Query: 121 TSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDR 180
           TSNV++YHLE PEFKMTLPV+PRFSIPIS+ VS SVLVGRKDSNKVARIVNKSVFDYIDR
Sbjct: 121 TSNVLSYHLEVPEFKMTLPVEPRFSIPISNAVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEV 239
           TSYR LAFDYLDFSPL+PFVSGIRAWISLLF+DDGNDG IDVFGIVMDFCDAANTKDEV
Sbjct: 181 TSYRALAFDYLDFSPLHPFVSGIRAWISLLFMDDGNDGAIDVFGIVMDFCDAANTKDEV 239

[Close]
BLAST of CmaCh08G001060 vs. NCBI nr
Match: gi|449458996|ref|XP_004147232.1| (PREDICTED: F-box protein At5g39250 [Cucumis sativus])

HSP 1 Score: 443.4 bits (1139), Expect = 7.3e-121
Identity = 209/239 (87.45%), Postives = 224/239 (93.72%), Query Frame = 1 

Query: 1   MRWEEILKVIFPLLEGVDLASCMAVCKQWRDIARDDFFWKCLCAKKWPSTCKNPDPPTNT 60
           M WEEILKVIFPLLEGVDLASCMAVCKQWRDIA+DD+FWKCLCAKKWPSTCK   PPT+T
Sbjct: 1   MTWEEILKVIFPLLEGVDLASCMAVCKQWRDIAQDDYFWKCLCAKKWPSTCKTSHPPTDT 60

Query: 61  YYKLYQNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVAGQVLQSGMK-PPPG 120
           YYKLY+NFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVV+G + Q+GMK PPP 
Sbjct: 61  YYKLYRNFYKRPNNRRLLPPRLSFDDLEFFIDIWSEDRLIFSEVVSGGIFQNGMKNPPPS 120

Query: 121 TSNVINYHLEAPEFKMTLPVQPRFSIPISHTVSVSVLVGRKDSNKVARIVNKSVFDYIDR 180
           T N+++YHLE PEFKMTL V+PRFSIPIS+TVS SVLVGRKDSNKVARIVNKSVFDYIDR
Sbjct: 121 TGNLLSYHLEVPEFKMTLTVEPRFSIPISNTVSASVLVGRKDSNKVARIVNKSVFDYIDR 180

Query: 181 TSYRTLAFDYLDFSPLYPFVSGIRAWISLLFLDDGNDGIIDVFGIVMDFCDAANTKDEV 239
           TSYR LAFDYLDFSP +PFVSGIRAWISLLF+DDG+DG IDVFGIVMDFCDAANTKDEV
Sbjct: 181 TSYRALAFDYLDFSPFHPFVSGIRAWISLLFMDDGDDGAIDVFGIVMDFCDAANTKDEV 239

[Close]
BLAST of CmaCh08G001060 vs. NCBI nr
Match: gi|163867055|gb|ABY47624.1| (ribosome-inactivating protein [Cucurbita moschata])

HSP 1 Score: 443.0 bits (1138), Expect = 9.5e-121
Identity = 231/236 (97.88%), Postives = 234/236 (99.15%), Query Frame = 1 

Query: 371 NVRFDLSGATSSSYKTFIKNLREALPKDGKVYDISVLLSTVMDSKRFILIDLVNYDGQSI 430
           NVRFDLS ATSSSYKTFIKNLREALPKDGKVYDI VLLSTVMDS+RFILIDLVNYDGQSI
Sbjct: 1   NVRFDLSSATSSSYKTFIKNLREALPKDGKVYDIPVLLSTVMDSRRFILIDLVNYDGQSI 60

Query: 431 TAAIDVLNVYIVAYSTGTVSYFFQQIPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 490
           TAAIDVLNVYIVAYSTGTVSYFFQQ+PAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR
Sbjct: 61  TAAIDVLNVYIVAYSTGTVSYFFQQVPAQAPKLLFKGTQQRTLPYTGNYENLQTAAKKLR 120

Query: 491 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 550
           ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS
Sbjct: 121 ENIELGLPALDSAITTLFHYNAEAAASALLVLIQTTSEAARFRYIELQIANNVGTKFKPS 180

Query: 551 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIK 607
           QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNI+
Sbjct: 181 QTIISLENNWSALSKQIQIAKNKNGQFETPVILIDPQGNRVQITNVTSNVVTQNIQ 236

The following BLAST results are available for this feature:
BLAST of CmaCh08G001060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RIP_CUCMO5.2e-12797.95Ribosome-inactivating protein cucurmosin OS=Cucurbita moschata PE=1 SV=2[more]
FB270_ARATH2.4e-9266.95F-box protein At5g39250 OS=Arabidopsis thaliana GN=At5g39250 PE=2 SV=1[more]
RIP2_MOMBA2.7e-8362.17Ribosome-inactivating protein momordin II OS=Momordica balsamina PE=3 SV=1[more]
RIP3_MOMCH1.0e-8261.80Ribosome-inactivating protein beta-momorcharin OS=Momordica charantia GN=MAP30 P... [more]
RIPT_TRIKI5.9e-7858.63Ribosome-inactivating protein alpha-trichosanthin OS=Trichosanthes kirilowii PE=... [more]
BLAST of CmaCh08G001060 vs. TrEMBL
Match NameE-valueIdentityDescription
D0VWS7_CUCMO5.8e-12597.95rRNA N-glycosidase OS=Cucurbita moschata PE=1 SV=1[more]
A0A0A0L6S1_CUCSA5.1e-12187.45Uncharacterized protein OS=Cucumis sativus GN=Csa_3G017250 PE=4 SV=1[more]
A0A061EG72_THECC4.2e-10775.73F-box protein OS=Theobroma cacao GN=TCM_018725 PE=4 SV=1[more]
B9SJD7_RICCO6.3e-10372.80Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0525640 PE=4 SV=1[more]
W9QIP2_9ROSA1.8e-10271.61Uncharacterized protein OS=Morus notabilis GN=L484_021013 PE=4 SV=1[more]
BLAST of CmaCh08G001060 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G39250.11.4e-9366.95 F-box family protein[more]
BLAST of CmaCh08G001060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|281185483|sp|P84531.2|RIP_CUCMO8.3e-12597.95RecName: Full=Ribosome-inactivating protein cucurmosin; AltName: Full=rRNA N-gly... [more]
gi|209156420|pdb|3BWH|A8.3e-12597.95Chain A, Atomic Resolution Structure Of Cucurmosin, A Novel Type 1 Rip From The ... [more]
gi|659095831|ref|XP_008448789.1|1.9e-12489.54PREDICTED: F-box protein At5g39250 [Cucumis melo][more]
gi|449458996|ref|XP_004147232.1|7.3e-12187.45PREDICTED: F-box protein At5g39250 [Cucumis sativus][more]
gi|163867055|gb|ABY47624.1|9.5e-12197.88ribosome-inactivating protein [Cucurbita moschata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001574Ribosome_inactivat_prot
IPR001810F-box_dom
IPR016138Ribosome_inactivat_prot_sub1
IPR016139Ribosome_inactivat_prot_sub2
IPR017988Ribosome_inactivat_prot_CS
IPR017989Ribosome_inactivat_1/2
Vocabulary: Biological Process
TermDefinition
GO:0017148negative regulation of translation
Vocabulary: Molecular Function
TermDefinition
GO:0030598rRNA N-glycosylase activity
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0017148 negative regulation of translation
biological_process GO:0009405 pathogenesis
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0030598 rRNA N-glycosylase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G001060.1CmaCh08G001060.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001574Ribosome-inactivating proteinPFAMPF00161RIPcoord: 380..568
score: 4.2
IPR001574Ribosome-inactivating proteinunknownSSF56371Ribosome inactivating proteins (RIP)coord: 372..612
score: 9.56
IPR001810F-box domainPFAMPF12937F-box-likecoord: 5..43
score: 4.9
IPR001810F-box domainunknownSSF81383F-box domaincoord: 4..70
score: 4.32
IPR016138Ribosome-inactivating protein, subdomain 1GENE3DG3DSA:3.40.420.10coord: 372..530
score: 1.5
IPR016139Ribosome-inactivating protein, subdomain 2GENE3DG3DSA:4.10.470.10coord: 531..611
score: 1.7
IPR017988Ribosome-inactivating protein conserved sitePROSITEPS00275SHIGA_RICINcoord: 523..539
scor
IPR017989Ribosome-inactivating protein subgroupPRINTSPR00396SHIGARICINcoord: 490..504
score: 1.5E-33coord: 519..539
score: 1.5E-33coord: 551..568
score: 1.5E-33coord: 382..395
score: 1.5E-33coord: 429..444
score: 1.5
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 5..76
score: 8.1
NoneNo IPR availablePANTHERPTHR20995FAMILY NOT NAMEDcoord: 4..238
score: 1.6
NoneNo IPR availablePANTHERPTHR20995:SF15SUBFAMILY NOT NAMEDcoord: 4..238
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh08G001060Csa6G040650Cucumber (Chinese Long) v2cmacuB910
CmaCh08G001060ClCG08G004120Watermelon (Charleston Gray)cmawcgB814
CmaCh08G001060CSPI06G03390Wild cucumber (PI 183967)cmacpiB930
CmaCh08G001060CmoCh08G001120Cucurbita moschata (Rifu)cmacmoB913
CmaCh08G001060Cp4.1LG12g04830Cucurbita pepo (Zucchini)cmacpeB906
CmaCh08G001060Cp4.1LG17g10140Cucurbita pepo (Zucchini)cmacpeB914
CmaCh08G001060CsaV3_6G003670Cucumber (Chinese Long) v3cmacucB1080
CmaCh08G001060Cla97C08G147410Watermelon (97103) v2cmawmbB930
CmaCh08G001060Bhi04G001651Wax gourdcmawgoB1115
CmaCh08G001060CsGy6G003380Cucumber (Gy14) v2cgybcmaB879
CmaCh08G001060Carg04935Silver-seed gourdcarcmaB0112
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh08G001060CmaCh17G005680Cucurbita maxima (Rimu)cmacmaB386
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh08G001060Cucurbita maxima (Rimu)cmacmaB381
CmaCh08G001060Cucurbita moschata (Rifu)cmacmoB882
CmaCh08G001060Cucurbita moschata (Rifu)cmacmoB895
CmaCh08G001060Cucurbita moschata (Rifu)cmacmoB900
CmaCh08G001060Wild cucumber (PI 183967)cmacpiB932
CmaCh08G001060Cucumber (Chinese Long) v2cmacuB911
CmaCh08G001060Melon (DHL92) v3.5.1cmameB819
CmaCh08G001060Watermelon (Charleston Gray)cmawcgB807
CmaCh08G001060Watermelon (97103) v1cmawmB876
CmaCh08G001060Cucurbita pepo (Zucchini)cmacpeB901
CmaCh08G001060Bottle gourd (USVL1VR-Ls)cmalsiB814
CmaCh08G001060Bottle gourd (USVL1VR-Ls)cmalsiB838
CmaCh08G001060Cucumber (Gy14) v2cgybcmaB464
CmaCh08G001060Melon (DHL92) v3.6.1cmamedB955
CmaCh08G001060Silver-seed gourdcarcmaB0305
CmaCh08G001060Cucumber (Chinese Long) v3cmacucB1061
CmaCh08G001060Watermelon (97103) v2cmawmbB924