CmaCh07G010820 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh07G010820
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Pyruvate decarboxylase
Location	Cma_Chr07 : 5789966 .. 5791194 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCTTTGGGTGCAACTTTAGGATATGCACAGGCTGCGCACAAGACCGAGTGATTCTTTGCGTTGGTGATGGGAGCTTTCAGGTAAGCTTTTGATCCTTTTAATTAATTTAAATTCTATTTCATGTTGTTATTATTCAAATACTTTTCAATTTTTTTTTTGTGGTAGATGACTCCACTGATAAAATTTGGTCAAAAGAACATAATATTTTTGATAAACAATGGTGGATACACTATTGAAGTAGAACTTCACGATGGCCCTTACAATGTTATCAAGAATTGGGATTACACTGCCATCGTCGATGCTATGCACAATGGTGATGGTAATTGTTGGACTACCAAGGTAAAATCTCTTAGCTTTTTACTTTTATTTTCATATACAATATTAGATCGAAACTGAGTAGTAACAGTCCAAACTCATCACTAGAAGATATTGTTTTTTTTTAGTTTTCCCTTTCGGGCTTCTTCTCAAGGCTTTTAAAGCGCGTCTGCTACTGAAAGGTTCCACACCCTTATAAAAAATATTTTGTTCTCCTGTTCTCCTCCTCAACCAATGTAGGATCTCACAATCTACTCATTCACAGCTCAGCGTCTTTTCTGGCACACTGCCTCATGTCCACCCCCTTTTAGGGCTCAACCTCCTCGTTAGCATATTGTCTCGTGTCCACCCCCTTTGACACTCAGCCTCCTTGCTGGCACATGGGCAGATGTCTAGCTCTGATATCATTTGTAATGGTCCAAGCCCATCACTAGTAGATATTGTCTTTGGACATTCCTCTTCGGGCTTCCCCTCAAGGTTTTTAAAACGTATCTAGGGAGAGATTTTCACACTCTTATAAATAATGTTTCGTTCTCCTCTCTAACCGATGTGAAATCTCACAAAAGACCTTTATTAGGATCTTACCTTAAAAGGCTTCGAGGACAAGACAGTATAATTTGTCAAAATGGGCTAATTAGTTAATGGTGAAAAAGGTGACACTTTTGTATTTTAAGGCACATATTGTACAATGTATAAAGTATGATTTTTTTCAAAAAAAATTTGTTGAGGAGTTTTTATGTAGGTACATACCGAAGAAGAGTTGGTGAATGCAATTGAGACAGCCATGGGCGATCGAAGTGATTGCTTGTGCCTCATAGAAGTTATTGTTCATAGAGATGATACGAGTAAAGAGTTACTTGAATTTGGAAACAAGTTGGCTGCTTGTTCAAGTCGTCCTCCAAGATTTTGA

mRNA sequence

ATGGTCTTTGGGTGCAACTTTAGGATATGCACAGGCTGCGCACAAGACCGAGTGATTCTTTGCGTTGGTGATGGGAGCTTTCAGATGACTCCACTGATAAAATTTGGTCAAAAGAACATAATATTTTTGATAAACAATGGTGGATACACTATTGAAGTAGAACTTCACGATGGCCCTTACAATGTTATCAAGAATTGGGATTACACTGCCATCGTCGATGCTATGCACAATGGTGATGGTAATTGTTGGACTACCAAGGTACATACCGAAGAAGAGTTGGTGAATGCAATTGAGACAGCCATGGGCGATCGAAGTGATTGCTTGTGCCTCATAGAAGTTATTGTTCATAGAGATGATACGAGTAAAGAGTTACTTGAATTTGGAAACAAGTTGGCTGCTTGTTCAAGTCGTCCTCCAAGATTTTGA

Coding sequence (CDS)

ATGGTCTTTGGGTGCAACTTTAGGATATGCACAGGCTGCGCACAAGACCGAGTGATTCTTTGCGTTGGTGATGGGAGCTTTCAGATGACTCCACTGATAAAATTTGGTCAAAAGAACATAATATTTTTGATAAACAATGGTGGATACACTATTGAAGTAGAACTTCACGATGGCCCTTACAATGTTATCAAGAATTGGGATTACACTGCCATCGTCGATGCTATGCACAATGGTGATGGTAATTGTTGGACTACCAAGGTACATACCGAAGAAGAGTTGGTGAATGCAATTGAGACAGCCATGGGCGATCGAAGTGATTGCTTGTGCCTCATAGAAGTTATTGTTCATAGAGATGATACGAGTAAAGAGTTACTTGAATTTGGAAACAAGTTGGCTGCTTGTTCAAGTCGTCCTCCAAGATTTTGA

Protein sequence

MVFGCNFRICTGCAQDRVILCVGDGSFQMTPLIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAIVDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEFGNKLAACSSRPPRF

Homology

[Close]

BLAST of CmaCh07G010820 vs. Swiss-Prot
Match: PDC1_ORYSJ (Pyruvate decarboxylase 1 OS=Oryza sativa subsp. japonica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.3e-51
Identity = 90/128 (70.31%), Postives = 109/128 (85.16%), Query Frame = 1


Query: 17  RVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAI 76
           RVI C+GDGSFQMT      +++ GQK+IIFLINNGGYTIEVE+HDGPYNVIKNWDYT +
Sbjct: 475 RVISCIGDGSFQMTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGL 534

Query: 77  VDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEFGNKL 136
           +DA+HN DGNCWT KV TEEEL+ AI TA G + DCLC IE+IVH+DDTSKELLE+G+++
Sbjct: 535 IDAIHNSDGNCWTKKVRTEEELIEAIATATGAKKDCLCFIEIIVHKDDTSKELLEWGSRV 594

Query: 137 AACSSRPP 140
           +A +SRPP
Sbjct: 595 SAANSRPP 602

[Close]

BLAST of CmaCh07G010820 vs. Swiss-Prot
Match: PDC1_ORYSI (Pyruvate decarboxylase 1 OS=Oryza sativa subsp. indica GN=PDC1 PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.3e-51
Identity = 90/128 (70.31%), Postives = 109/128 (85.16%), Query Frame = 1


Query: 17  RVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAI 76
           RVI C+GDGSFQMT      +++ GQK+IIFLINNGGYTIEVE+HDGPYNVIKNWDYT +
Sbjct: 475 RVISCIGDGSFQMTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGL 534

Query: 77  VDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEFGNKL 136
           +DA+HN DGNCWT KV TEEEL+ AI TA G + DCLC IE+IVH+DDTSKELLE+G+++
Sbjct: 535 IDAIHNSDGNCWTKKVRTEEELIEAIATATGAKKDCLCFIEIIVHKDDTSKELLEWGSRV 594

Query: 137 AACSSRPP 140
           +A +SRPP
Sbjct: 595 SAANSRPP 602

[Close]

BLAST of CmaCh07G010820 vs. Swiss-Prot
Match: PDC2_TOBAC (Pyruvate decarboxylase 2 OS=Nicotiana tabacum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.1e-50
Identity = 89/128 (69.53%), Postives = 107/128 (83.59%), Query Frame = 1


Query: 17  RVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAI 76
           RVI C+GDGSFQ+T      +I+  QKNIIFLINNGGYTIEVE+HDGPYNVIKNW+YT +
Sbjct: 484 RVISCIGDGSFQVTAQDVSTMIRCEQKNIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGL 543

Query: 77  VDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEFGNKL 136
           VDA+HNG+GNCWT KV TEEEL  AI TA G++ DCLC IEVIVH+DDTSKELLE+G+++
Sbjct: 544 VDAIHNGEGNCWTMKVRTEEELTEAIATATGEKKDCLCFIEVIVHKDDTSKELLEWGSRV 603

Query: 137 AACSSRPP 140
            + + RPP
Sbjct: 604 CSANGRPP 611

[Close]

BLAST of CmaCh07G010820 vs. Swiss-Prot
Match: PDC1_MAIZE (Pyruvate decarboxylase 1 OS=Zea mays GN=PDC1 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 4.6e-49
Identity = 87/128 (67.97%), Postives = 107/128 (83.59%), Query Frame = 1


Query: 17  RVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAI 76
           RVI C+GDGSFQ+T      +++ GQK+IIFLINNGGYTIEVE+HDGPYNVIKNWDYT +
Sbjct: 480 RVIACIGDGSFQVTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWDYTGL 539

Query: 77  VDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEFGNKL 136
           V+A+HN +GNCWT KV TEE+L  AI T  G + DCLC IEVIVH+DDTSKELLE+G+++
Sbjct: 540 VNAIHNSEGNCWTMKVRTEEQLKEAIATVTGAKKDCLCFIEVIVHKDDTSKELLEWGSRV 599

Query: 137 AACSSRPP 140
           +A +SRPP
Sbjct: 600 SAANSRPP 607

[Close]

BLAST of CmaCh07G010820 vs. Swiss-Prot
Match: PDC2_PEA (Pyruvate decarboxylase 2 (Fragment) OS=Pisum sativum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 7.8e-49
Identity = 88/130 (67.69%), Postives = 107/130 (82.31%), Query Frame = 1


Query: 15  QDRVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYT 74
           + RVI C+GDGSFQ+T      +++ GQK IIFLINNGGYTIEVE+HDGPYNVIKNW+YT
Sbjct: 273 EKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYT 332

Query: 75  AIVDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEFGN 134
            +VDA+HNG+G CWTTKV  EEELV AI  A G + D LC IEVIVH+DDTSKELLE+G+
Sbjct: 333 GLVDAIHNGEGKCWTTKVFCEEELVEAIAKATGPKKDSLCFIEVIVHKDDTSKELLEWGS 392

Query: 135 KLAACSSRPP 140
           +++A +SRPP
Sbjct: 393 RVSAANSRPP 402

[Close]

BLAST of CmaCh07G010820 vs. TrEMBL
Match: A0A0A0L1C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G312250 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.8e-52
Identity = 96/129 (74.42%), Postives = 110/129 (85.27%), Query Frame = 1


Query: 17  RVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAI 76
           R++LC+GDGSFQM P     ++K GQKNIIFLINNGGYTIEVE+HDGPYN+I NWDYTA 
Sbjct: 508 RLLLCIGDGSFQMAPQDVSTMLKLGQKNIIFLINNGGYTIEVEIHDGPYNIINNWDYTAF 567

Query: 77  VDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEFGNKL 136
           VDA++N   NCWTTKVHTEEELVNAIE AM DR+DCLC IEVI HRDDTSKELLEFG+++
Sbjct: 568 VDAVNNHQSNCWTTKVHTEEELVNAIEIAMKDRNDCLCFIEVIAHRDDTSKELLEFGSRI 627

Query: 137 AACSSRPPR 141
           AA  S PP+
Sbjct: 628 AAMGSHPPK 636

[Close]

BLAST of CmaCh07G010820 vs. TrEMBL
Match: A0A0A0L2P1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G312240 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.8e-52
Identity = 102/142 (71.83%), Postives = 111/142 (78.17%), Query Frame = 1


Query: 4   GCNFRICTGCAQDRVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDG 63
           G          + RV+L +GDGSFQMTP     +I   Q NIIFLINNGGYTIEVE+HDG
Sbjct: 554 GATLGYAQAAPEKRVVLFIGDGSFQMTPQDVSTMITLKQNNIIFLINNGGYTIEVEIHDG 613

Query: 64  PYNVIKNWDYTAIVDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRD 123
           PYNVIKNWDYTAIV+AMHN DGNCWTTKVHTEEELVNAIE  + +R D LC IEVIVHRD
Sbjct: 614 PYNVIKNWDYTAIVNAMHNHDGNCWTTKVHTEEELVNAIEIVLKERKDSLCFIEVIVHRD 673

Query: 124 DTSKELLEFGNKLAACSSRPPR 141
           DTSKELLEFG+K A  SSRPPR
Sbjct: 674 DTSKELLEFGSKFANVSSRPPR 695

[Close]

BLAST of CmaCh07G010820 vs. TrEMBL
Match: A0A0A0KZZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G312270 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 8.9e-52
Identity = 95/129 (73.64%), Postives = 109/129 (84.50%), Query Frame = 1


Query: 17  RVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAI 76
           RV+LC+GDGSFQM P     +++ GQ+NIIFLINNGGYTIEVE+HDGPYN+IKNWDY A+
Sbjct: 238 RVVLCIGDGSFQMAPQDLSTMLRLGQRNIIFLINNGGYTIEVEIHDGPYNIIKNWDYCAL 297

Query: 77  VDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEFGNKL 136
           VDAMHN +GNCWT KV TEE+LV AIE A  D +DCLC IE IVHRDDTSKELLEFGNKL
Sbjct: 298 VDAMHNHNGNCWTRKVQTEEQLVKAIEIATRDHNDCLCFIEAIVHRDDTSKELLEFGNKL 357

Query: 137 AACSSRPPR 141
           A  +SRPP+
Sbjct: 358 AEMNSRPPK 366

[Close]

BLAST of CmaCh07G010820 vs. TrEMBL
Match: J3M813_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.9e-50
Identity = 94/132 (71.21%), Postives = 112/132 (84.85%), Query Frame = 1


Query: 14  AQD-RVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWD 73
           AQD RVI C+GDGSFQMT      +++ GQK+IIFLINNGGYTIEVE+HDGPYNVIKNWD
Sbjct: 222 AQDKRVISCIGDGSFQMTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWD 281

Query: 74  YTAIVDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEF 133
           YT ++DA+HN DGNCWT KV TEEEL  A+ TA GD+ DCLC IEVIVH+DDTSKELLE+
Sbjct: 282 YTGLIDAIHNSDGNCWTKKVRTEEELREALATATGDKKDCLCFIEVIVHKDDTSKELLEW 341

Query: 134 GNKLAACSSRPP 140
           G++++A +SRPP
Sbjct: 342 GSRVSAANSRPP 353

[Close]

BLAST of CmaCh07G010820 vs. TrEMBL
Match: A0A0D9WHJ3_9ORYZ (Uncharacterized protein OS=Leersia perrieri PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 8.4e-50
Identity = 94/132 (71.21%), Postives = 111/132 (84.09%), Query Frame = 1


Query: 14  AQD-RVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWD 73
           AQD RVI C+GDGSFQMT      +++ GQK+IIFLINNGGYTIEVE+HDGPYNVIKNWD
Sbjct: 472 AQDKRVIACIGDGSFQMTAQDVSTMLRCGQKSIIFLINNGGYTIEVEIHDGPYNVIKNWD 531

Query: 74  YTAIVDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEF 133
           YT ++DA+HN DGNCWT KV TEEEL  AI TA G + DCLC IEVIVH+DDTSKELLE+
Sbjct: 532 YTGLIDAIHNADGNCWTKKVRTEEELKEAIATATGAKKDCLCFIEVIVHKDDTSKELLEW 591

Query: 134 GNKLAACSSRPP 140
           G++++A +SRPP
Sbjct: 592 GSRVSAANSRPP 603

[Close]

BLAST of CmaCh07G010820 vs. TAIR10
Match: AT4G33070.1 (AT4G33070.1 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein)

HSP 1 Score: 192.6 bits (488), Expect = 1.7e-49
Identity = 86/130 (66.15%), Postives = 108/130 (83.08%), Query Frame = 1


Query: 15  QDRVILCVGDGSFQMT-----PLIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYT 74
           + RV+  +GDGSFQ+T      +++ GQK IIFLINNGGYTIEVE+HDGPYNVIKNW+YT
Sbjct: 475 EKRVLAFIGDGSFQVTVQDISTMLRNGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYT 534

Query: 75  AIVDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEFGN 134
            +VDA+HNG+GNCWT KV  EEELV AI TA  ++ DCLC IEVI+H+DDTSKELLE+G+
Sbjct: 535 GLVDAIHNGEGNCWTAKVRYEEELVEAITTATTEKKDCLCFIEVILHKDDTSKELLEWGS 594

Query: 135 KLAACSSRPP 140
           +++A +SRPP
Sbjct: 595 RVSAANSRPP 604

[Close]

BLAST of CmaCh07G010820 vs. TAIR10
Match: AT5G54960.1 (AT5G54960.1 pyruvate decarboxylase-2)

HSP 1 Score: 189.9 bits (481), Expect = 1.1e-48
Identity = 86/128 (67.19%), Postives = 104/128 (81.25%), Query Frame = 1


Query: 17  RVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAI 76
           RVI C+GDGSFQ+T      +I+ GQK IIFLINNGGYTIEVE+HDGPYNVIKNW+YTA 
Sbjct: 477 RVIACIGDGSFQVTAQDVSTMIRCGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTAF 536

Query: 77  VDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEFGNKL 136
           V+A+HNG+G CWT KV  EEELV AI TA  +  +  C IEVIVH+DDTSKELLE+G+++
Sbjct: 537 VEAIHNGEGKCWTAKVRCEEELVKAINTATNEEKESFCFIEVIVHKDDTSKELLEWGSRV 596

Query: 137 AACSSRPP 140
           +A +SRPP
Sbjct: 597 SAANSRPP 604

[Close]

BLAST of CmaCh07G010820 vs. TAIR10
Match: AT5G01320.1 (AT5G01320.1 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein)

HSP 1 Score: 188.3 bits (477), Expect = 3.1e-48
Identity = 86/130 (66.15%), Postives = 107/130 (82.31%), Query Frame = 1


Query: 15  QDRVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYT 74
           + RV+  +GDGSFQ+T      +I+ GQK IIFLINNGGYTIEVE+HDGPYNVIKNW+YT
Sbjct: 471 EKRVLSFIGDGSFQVTAQDISTMIRNGQKAIIFLINNGGYTIEVEIHDGPYNVIKNWNYT 530

Query: 75  AIVDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEFGN 134
            +VDA+HNG+G CWTTKV  EEELV AI+TA  ++ D LC IEVIVH+DDTSKELLE+G+
Sbjct: 531 GLVDAIHNGEGKCWTTKVRYEEELVEAIKTATTEKKDSLCFIEVIVHKDDTSKELLEWGS 590

Query: 135 KLAACSSRPP 140
           +++A + RPP
Sbjct: 591 RVSAANGRPP 600

[Close]

BLAST of CmaCh07G010820 vs. TAIR10
Match: AT5G01330.1 (AT5G01330.1 pyruvate decarboxylase-3)

HSP 1 Score: 188.0 bits (476), Expect = 4.1e-48
Identity = 86/130 (66.15%), Postives = 106/130 (81.54%), Query Frame = 1


Query: 15  QDRVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYT 74
           + RV+  +GDGSFQ+T      +I+ GQK IIFLINNGGYTIEVE+HDGPYNVIKNW+YT
Sbjct: 460 EKRVLSFIGDGSFQVTAQDVSTMIRNGQKTIIFLINNGGYTIEVEIHDGPYNVIKNWNYT 519

Query: 75  AIVDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEFGN 134
            +VDA+HNG+G CWTTKV  EEELV AI TA  ++ D LC IEVIVH+DDTSKELLE+G+
Sbjct: 520 GLVDAIHNGEGKCWTTKVRYEEELVEAINTATLEKKDSLCFIEVIVHKDDTSKELLEWGS 579

Query: 135 KLAACSSRPP 140
           +++A + RPP
Sbjct: 580 RVSAANGRPP 589

[Close]

BLAST of CmaCh07G010820 vs. NCBI nr
Match: gi|659128566|ref|XP_008464266.1| (PREDICTED: pyruvate decarboxylase 1-like [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 2.8e-54
Identity = 100/131 (76.34%), Postives = 113/131 (86.26%), Query Frame = 1


Query: 14  AQDRVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDY 73
           + DRV+LC+GDGSFQM P     +++ GQ+NIIFLINNGGYTIEVE+HDGPYNVIKNWDY
Sbjct: 497 SNDRVVLCIGDGSFQMAPQDLSTMLRLGQRNIIFLINNGGYTIEVEIHDGPYNVIKNWDY 556

Query: 74  TAIVDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEFG 133
           +A+VDAMHN +GNCWTTKV TEEELV AIE A  D +DCLC IEVIVHRDDTSKELLEFG
Sbjct: 557 SALVDAMHNHNGNCWTTKVQTEEELVKAIEIATRDHNDCLCFIEVIVHRDDTSKELLEFG 616

Query: 134 NKLAACSSRPP 140
           NKLA  +SRPP
Sbjct: 617 NKLAEMNSRPP 627

[Close]

BLAST of CmaCh07G010820 vs. NCBI nr
Match: gi|659128452|ref|XP_008464213.1| (PREDICTED: pyruvate decarboxylase 1-like [Cucumis melo])

HSP 1 Score: 214.5 bits (545), Expect = 1.2e-52
Identity = 101/142 (71.13%), Postives = 112/142 (78.87%), Query Frame = 1


Query: 4   GCNFRICTGCAQDRVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDG 63
           G          ++RV+LC+GDGSFQMTP     +I   Q NIIFLINNGGYTIEVE+HDG
Sbjct: 498 GATLGYAQAAPEERVVLCIGDGSFQMTPQDVSTMITLKQNNIIFLINNGGYTIEVEIHDG 557

Query: 64  PYNVIKNWDYTAIVDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRD 123
           PYNVIKNWDYTAIV AMHN DG CWTTKVHTEEEL+NAIE  + +R D LC IEVIVHRD
Sbjct: 558 PYNVIKNWDYTAIVKAMHNHDGYCWTTKVHTEEELMNAIEIVLEERKDYLCFIEVIVHRD 617

Query: 124 DTSKELLEFGNKLAACSSRPPR 141
           DTS+ELLEFG+K AA SSRPPR
Sbjct: 618 DTSRELLEFGSKFAAVSSRPPR 639

[Close]

BLAST of CmaCh07G010820 vs. NCBI nr
Match: gi|449461805|ref|XP_004148632.1| (PREDICTED: pyruvate decarboxylase 1-like [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 2.6e-52
Identity = 102/142 (71.83%), Postives = 111/142 (78.17%), Query Frame = 1


Query: 4   GCNFRICTGCAQDRVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDG 63
           G          + RV+L +GDGSFQMTP     +I   Q NIIFLINNGGYTIEVE+HDG
Sbjct: 490 GATLGYAQAAPEKRVVLFIGDGSFQMTPQDVSTMITLKQNNIIFLINNGGYTIEVEIHDG 549

Query: 64  PYNVIKNWDYTAIVDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRD 123
           PYNVIKNWDYTAIV+AMHN DGNCWTTKVHTEEELVNAIE  + +R D LC IEVIVHRD
Sbjct: 550 PYNVIKNWDYTAIVNAMHNHDGNCWTTKVHTEEELVNAIEIVLKERKDSLCFIEVIVHRD 609

Query: 124 DTSKELLEFGNKLAACSSRPPR 141
           DTSKELLEFG+K A  SSRPPR
Sbjct: 610 DTSKELLEFGSKFANVSSRPPR 631

[Close]

BLAST of CmaCh07G010820 vs. NCBI nr
Match: gi|778693841|ref|XP_004148631.2| (PREDICTED: pyruvate decarboxylase 1-like [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 2.6e-52
Identity = 96/129 (74.42%), Postives = 110/129 (85.27%), Query Frame = 1


Query: 17  RVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAI 76
           R++LC+GDGSFQM P     ++K GQKNIIFLINNGGYTIEVE+HDGPYN+I NWDYTA 
Sbjct: 504 RLLLCIGDGSFQMAPQDVSTMLKLGQKNIIFLINNGGYTIEVEIHDGPYNIINNWDYTAF 563

Query: 77  VDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEFGNKL 136
           VDA++N   NCWTTKVHTEEELVNAIE AM DR+DCLC IEVI HRDDTSKELLEFG+++
Sbjct: 564 VDAVNNHQSNCWTTKVHTEEELVNAIEIAMKDRNDCLCFIEVIAHRDDTSKELLEFGSRI 623

Query: 137 AACSSRPPR 141
           AA  S PP+
Sbjct: 624 AAMGSHPPK 632

[Close]

BLAST of CmaCh07G010820 vs. NCBI nr
Match: gi|700199234|gb|KGN54392.1| (hypothetical protein Csa_4G312250 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 2.6e-52
Identity = 96/129 (74.42%), Postives = 110/129 (85.27%), Query Frame = 1


Query: 17  RVILCVGDGSFQMTP-----LIKFGQKNIIFLINNGGYTIEVELHDGPYNVIKNWDYTAI 76
           R++LC+GDGSFQM P     ++K GQKNIIFLINNGGYTIEVE+HDGPYN+I NWDYTA 
Sbjct: 508 RLLLCIGDGSFQMAPQDVSTMLKLGQKNIIFLINNGGYTIEVEIHDGPYNIINNWDYTAF 567

Query: 77  VDAMHNGDGNCWTTKVHTEEELVNAIETAMGDRSDCLCLIEVIVHRDDTSKELLEFGNKL 136
           VDA++N   NCWTTKVHTEEELVNAIE AM DR+DCLC IEVI HRDDTSKELLEFG+++
Sbjct: 568 VDAVNNHQSNCWTTKVHTEEELVNAIEIAMKDRNDCLCFIEVIAHRDDTSKELLEFGSRI 627

Query: 137 AACSSRPPR 141
           AA  S PP+
Sbjct: 628 AAMGSHPPK 636

The following BLAST results are available for this feature:

BLAST of CmaCh07G010820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PDC1_ORYSJ	1.3e-51	70.31	Pyruvate decarboxylase 1 OS=Oryza sativa subsp. japonica GN=PDC1 PE=2 SV=1	[more]
PDC1_ORYSI	1.3e-51	70.31	Pyruvate decarboxylase 1 OS=Oryza sativa subsp. indica GN=PDC1 PE=2 SV=1	[more]
PDC2_TOBAC	4.1e-50	69.53	Pyruvate decarboxylase 2 OS=Nicotiana tabacum GN=PDC2 PE=2 SV=1	[more]
PDC1_MAIZE	4.6e-49	67.97	Pyruvate decarboxylase 1 OS=Zea mays GN=PDC1 PE=2 SV=1	[more]
PDC2_PEA	7.8e-49	67.69	Pyruvate decarboxylase 2 (Fragment) OS=Pisum sativum GN=PDC2 PE=2 SV=1	[more]

BLAST of CmaCh07G010820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1C6_CUCSA	1.8e-52	74.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G312250 PE=3 SV=1	[more]
A0A0A0L2P1_CUCSA	1.8e-52	71.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G312240 PE=3 SV=1	[more]
A0A0A0KZZ6_CUCSA	8.9e-52	73.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G312270 PE=4 SV=1	[more]
J3M813_ORYBR	2.9e-50	71.21	Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1	[more]
A0A0D9WHJ3_9ORYZ	8.4e-50	71.21	Uncharacterized protein OS=Leersia perrieri PE=3 SV=1	[more]

BLAST of CmaCh07G010820 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33070.1	1.7e-49	66.15	Thiamine pyrophosphate dependent pyruvate decarboxylase family prote...	[more]
AT5G54960.1	1.1e-48	67.19	pyruvate decarboxylase-2	[more]
AT5G01320.1	3.1e-48	66.15	Thiamine pyrophosphate dependent pyruvate decarboxylase family prote...	[more]
AT5G01330.1	4.1e-48	66.15	pyruvate decarboxylase-3	[more]

BLAST of CmaCh07G010820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128566\|ref\|XP_008464266.1\|	2.8e-54	76.34	PREDICTED: pyruvate decarboxylase 1-like [Cucumis melo]	[more]
gi\|659128452\|ref\|XP_008464213.1\|	1.2e-52	71.13	PREDICTED: pyruvate decarboxylase 1-like [Cucumis melo]	[more]
gi\|449461805\|ref\|XP_004148632.1\|	2.6e-52	71.83	PREDICTED: pyruvate decarboxylase 1-like [Cucumis sativus]	[more]
gi\|778693841\|ref\|XP_004148631.2\|	2.6e-52	74.42	PREDICTED: pyruvate decarboxylase 1-like [Cucumis sativus]	[more]
gi\|700199234\|gb\|KGN54392.1\|	2.6e-52	74.42	hypothetical protein Csa_4G312250 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011766	TPP_enzyme-bd_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0030976	thiamine pyrophosphate binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006096	glycolytic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0009536	plastid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0004737	pyruvate decarboxylase activity
molecular_function	GO:0030976	thiamine pyrophosphate binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016831	carboxy-lyase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G010820.1	CmaCh07G010820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011766	Thiamine pyrophosphate enzyme, C-terminal TPP-binding	PFAM	PF02775	TPP_enzyme_C	coord: 15..113 score: 2.
None	No IPR available	PANTHER	PTHR18968	THIAMINE PYROPHOSPHATE ENZYMES	coord: 14..139 score: 3.0
None	No IPR available	PANTHER	PTHR18968:SF121	PYRUVATE DECARBOXYLASE 1-RELATED	coord: 14..139 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh07G010820	MELO3C026006	Melon (DHL92) v3.5.1	cmameB803
CmaCh07G010820	CmoCh03G003520	Cucurbita moschata (Rifu)	cmacmoB860
CmaCh07G010820	CmoCh06G002100	Cucurbita moschata (Rifu)	cmacmoB873
CmaCh07G010820	CmoCh07G011320	Cucurbita moschata (Rifu)	cmacmoB875
CmaCh07G010820	Lsi01G015590	Bottle gourd (USVL1VR-Ls)	cmalsiB794
CmaCh07G010820	Cp4.1LG19g02570	Cucurbita pepo (Zucchini)	cmacpeB880
CmaCh07G010820	Cp4.1LG10g07850	Cucurbita pepo (Zucchini)	cmacpeB868
CmaCh07G010820	MELO3C026007.2	Melon (DHL92) v3.6.1	cmamedB904
CmaCh07G010820	CsaV3_4G026400	Cucumber (Chinese Long) v3	cmacucB1025
CmaCh07G010820	Cla97C04G073480	Watermelon (97103) v2	cmawmbB894
CmaCh07G010820	Bhi03G001701	Wax gourd	cmawgoB1077
CmaCh07G010820	CsGy4G015320	Cucumber (Gy14) v2	cgybcmaB573
CmaCh07G010820	Carg13303	Silver-seed gourd	carcmaB0818
CmaCh07G010820	Carg20007	Silver-seed gourd	carcmaB0779

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh07G010820	CmaCh03G003390	Cucurbita maxima (Rimu)	cmacmaB526

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh07G010820	Cucumber (Chinese Long) v2	cmacuB871
CmaCh07G010820	Watermelon (Charleston Gray)	cmawcgB765