CmaCh07G008080 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh07G008080
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat superfamily protein, putative
LocationCma_Chr07 : 3717610 .. 3719719 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCACGAGTTTTTAAAGAAAGATATAATAGAAAACTTGTTACTTGAGAGAGGAAACTTGTGAGTTCAGCTTTCTGTTCATTTTTGGTCAAATTTTTTCTAGTGAAACCATCAACTTCGCGAGCAGATTGTAGATGATCCGCTAACAGTTCGTTGTTCAAGTTTCGGGAATTCGTGAAGGTATTCGTTTCTTCTTTTGCGCATTGATTTAGTAGAAATTTGGATGCATTTAAGTTAGTAATTACATGTTAATTTTCGATTCAACTCTCGTGATTTCGATGAAGGTTTTTCTTGTAGAACTTGTTCTATTGTATGATATATTGGCTGTGCGATTTTATTGTTGTTCTGTTTGGTCCTCTTTAAGTTTTTTTCGATCCTTGTAATGGGAATTTCTTTGTTCTAACGAGTTTTTAGTATGTTAATTTTATCTTCAAGTGTTTGGTTTTCGTTAACTGCTGGTGAATTATCCATCGAGTGGGGTAATTTTATCGACACACCATTGCTGTCTACTAGAATGAGAACGGATAGTCAACAATGTGATATTTGGCATTATAATGAGTAATTTGTAGATGATTTGCAGGAACTAGCCCACTTTAAGGATTTAATTAATCTCCCAACCTTCTCATTGTCCGTTTTGATTGAGGAGTTCAGTTCCTTGATTGTTAATTTTCATCTCCAGCAAGGTGTTTGTTCTATTCAACTATGCTAATCAGTAGAAGTTGTATAGTTAGCAAAAACCTTACTTCTTCTAGGTTGCTATACGATCTAAAAATGGTGCCCACGATTTTTTCCCATCCTTTGATCACTGTGATCTTCTATCTCACTAAGCTTAAAACAGGACACTTACAGGTTGGCATGTCCTTGCACTCCCACCTTATCAAAATTGCGCTTTCATTTGAACTCTCCCTTGAAAACCGTCTTATTGACGACGTGTATTCTAAATTAATTCTATGGAAAATACACAGAAGGCATTTGATGATTTACCAATTAGAAATATTCACTCTTAGAATACCATTTTTGCTTCCTACTCATGTGTTAGATTTTTGGGTCAAGCTCGTAAGGTCTTTCATGAAATGCTTCATCCAAATATTGTTAGCTACAATACCTTGATTTCTAGCTTTACTCGCGATGGGTTGAGTGTAGAATCAATGAATATCTTTCGAATATTGCAACAAGATTTTGATCTTTTAGTCTTAGACAAGTTTACTCTTGCGAGTATAGTGGATACTTGTGCCTCTTTGGGAGCTCTGGAATCATTGTGTCAGGTTCAAGTTTAATATGATTGTTCTCAATGCTGTAATTGATGCATACAGTAAATGTGGCGAACTGGATACGTCATATTCTATTTTCAGTCAAATGCAGGAGAGAAATGTTGTTACCTGGACCTCAATGGTTGTAGCCTATTCTCAGACATCGATGTTAGATGATGTTTTTCGAGTGTTAAGTTGTATGCCGGAAAAAGATGTCCATACTTGGACTGCTTTGATTAATTCTTTTGTAAGCAACAAGTATAGAAATGAGGCCCTGGATTTATTTGAACAAATGCTGGAGGAAAAGATTTCTCCTAATGATTTGACATTTGTAGGTTTTTAGGTGCTTGTGTAGATCTTGGTTTGATAGCAAAAGGAAAAACGATTCATGGACTCATAATCAGAAGGAACAGTGGCCTTAATTTTTCAAAGGTATGTGCATGCAACACTATAACTGATCTGTACAGTTAGAGTGGGGACATGAAATCAGCTAGGACGTTGTTTAACTTGATTCTTGAAAAAGATGAATTGTCGTGGAATTCATTAATAACTGGGTATGCATAAATGGGATTGGAAGGGAAGTTCTTCTTGACTTAGGAGAATGATAGATGTAGGGATAAGACCGAAAGTGCGTTTCTAGATGTGCTGTCTGCCTGTTCCCATACTGGTTTGTCATCTAAAGGATTATATATTCCGGAGTTAATGGAGAAGTGTTGTGGTATTAAGCATAGTTTAGATCATTATGCGGTCTTGATTGATATGTTTGGAAGAAAAAATAGACTTGCCGAAGTATTGGATTTAATGTCCAGGGCACATAATGGATCAAAACATGTCATGGGGTGCAGTTTTGGGGTCTAG

mRNA sequence

ATGGGTCACGAGTTCAAGTTTAATATGATTGTTCTCAATGCTGTAATTGATGCATACAGTAAATGTGGCGAACTGGATACGTCATATTCTATTTTCAGTCAAATGCAGGAGAGAAATGTTGTTACCTGGACCTCAATGGTTGTAGCCTATTCTCAGACATCGATGTTAGATGATGTTTTTCGAGTGTTAAGTTGTATGCCGGAAAAAGATGTCCATACTTGGACTGCTTTGATTAATTCTTTTGTAAGCAACAAGTATAGAAATGAGGCCCTGGATTTATTTGAACAAATGCTGGAGGAAAAGATTTCTCCTAATGATTTGACATTTGTAGGTGCTTGTGTAGATCTTGGTTTGATAGCAAAAGGAAAAACGATTCATGGACTCATAATCAGAAGGAACAGTGGCCTTAATTTTTCAAAGAGTGGGGACATGAAATCAGCTAGGACGTTGTTTAACTTGATTCTTGAAAAAGATGAATTGTCGTGGAATTCATTAATAACTGGGGATAAGACCGAAAGTGCGTTTCTAGATGTGCTGTCTGCCTGTTCCCATACTGGTTTGTCATCTAAAGGATTATATATTCCGGAGTTAATGGAGAAGTGTTGTGGTATTAAGCATAGTTTAGATCATTATGCGGTCTTGATTGATATGTTTGGAAGAAAAAATAGACTTGCCGAAGTATTGGATTTAATGTCCAGGGCACATAATGGATCAAAACATGTCATGGGGTGCAGTTTTGGGGTCTAG

Coding sequence (CDS)

ATGGGTCACGAGTTCAAGTTTAATATGATTGTTCTCAATGCTGTAATTGATGCATACAGTAAATGTGGCGAACTGGATACGTCATATTCTATTTTCAGTCAAATGCAGGAGAGAAATGTTGTTACCTGGACCTCAATGGTTGTAGCCTATTCTCAGACATCGATGTTAGATGATGTTTTTCGAGTGTTAAGTTGTATGCCGGAAAAAGATGTCCATACTTGGACTGCTTTGATTAATTCTTTTGTAAGCAACAAGTATAGAAATGAGGCCCTGGATTTATTTGAACAAATGCTGGAGGAAAAGATTTCTCCTAATGATTTGACATTTGTAGGTGCTTGTGTAGATCTTGGTTTGATAGCAAAAGGAAAAACGATTCATGGACTCATAATCAGAAGGAACAGTGGCCTTAATTTTTCAAAGAGTGGGGACATGAAATCAGCTAGGACGTTGTTTAACTTGATTCTTGAAAAAGATGAATTGTCGTGGAATTCATTAATAACTGGGGATAAGACCGAAAGTGCGTTTCTAGATGTGCTGTCTGCCTGTTCCCATACTGGTTTGTCATCTAAAGGATTATATATTCCGGAGTTAATGGAGAAGTGTTGTGGTATTAAGCATAGTTTAGATCATTATGCGGTCTTGATTGATATGTTTGGAAGAAAAAATAGACTTGCCGAAGTATTGGATTTAATGTCCAGGGCACATAATGGATCAAAACATGTCATGGGGTGCAGTTTTGGGGTCTAG

Protein sequence

MGHEFKFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFVGACVDLGLIAKGKTIHGLIIRRNSGLNFSKSGDMKSARTLFNLILEKDELSWNSLITGDKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFGRKNRLAEVLDLMSRAHNGSKHVMGCSFGV
Homology
[Close]
BLAST of CmaCh07G008080 vs. Swiss-Prot
Match: PP308_ARATH (Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2 SV=3)

HSP 1 Score: 137.1 bits (344), Expect = 2.6e-31
Identity = 76/264 (28.79%), Postives = 140/264 (53.03%), Query Frame = 1 

Query: 4   EFKFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVL 63
           E+  + +V ++++D Y+KCG L+++ ++F  ++ +N ++WT+MV  Y+++   ++   + 
Sbjct: 135 EYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 194

Query: 64  SCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPND----LTFVGACVDLGLI 123
             +P K++++WTALI+ FV +    EA  +F +M  E++   D     + VGAC +L   
Sbjct: 195 RILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAAS 254

Query: 124 AKGKTIHGLIIR---------RNSGLN-FSKSGDMKSARTLFNLILEKDELSWNSLITG- 183
             G+ +HGL+I           N+ ++ ++K  D+ +A+ +F+ +  +D +SW SLI G 
Sbjct: 255 IAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGM 314

Query: 184 ---------------------DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHS 232
                                   E  F+ ++ ACSH G   KG  + + M K  GI+ S
Sbjct: 315 AQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPS 374

[Close]
BLAST of CmaCh07G008080 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.7e-30
Identity = 79/257 (30.74%), Postives = 133/257 (51.75%), Query Frame = 1 

Query: 8   NMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMP 67
           N+ + NA++D Y+KCG ++ +  +F  M+E++ VTWT+M+  Y+ +   +    VL+ MP
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325

Query: 68  EKDVHTWTALINSFVSNKYRNEALDLFEQM-LEEKISPNDLTFV---GACVDLGLIAKGK 127
           +KD+  W ALI+++  N   NEAL +F ++ L++ +  N +T V    AC  +G +  G+
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385

Query: 128 TIHGLIIRRNSGLNF----------SKSGDMKSARTLFNLILEKDELSWNSLITG----- 187
            IH  I +    +NF          SK GD++ +R +FN + ++D   W+++I G     
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445

Query: 188 ---------DKTESA--------FLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHY 229
                     K + A        F +V  ACSHTGL  +   +   ME   GI     HY
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHY 505

[Close]
BLAST of CmaCh07G008080 vs. Swiss-Prot
Match: PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 9.2e-29
Identity = 74/263 (28.14%), Postives = 129/263 (49.05%), Query Frame = 1 

Query: 15  VIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTW 74
           +++ Y K GEL  +  +F +M +R+ V  T M+  YS+   + +   +   +  KD   W
Sbjct: 164 MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCW 223

Query: 75  TALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFV---GACVDLGLIAKGKTIHGLIIR 134
           TA+I+  V NK  N+AL+LF +M  E +S N+ T V    AC DLG +  G+ +H  +  
Sbjct: 224 TAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVEN 283

Query: 135 RNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLITGDKTESAFLD---- 194
           +   L+          +S+ GD+  AR +F ++ +KD +S+N++I+G     A ++    
Sbjct: 284 QRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINE 343

Query: 195 ------------------VLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFG 243
                             +L+ACSH GL   GL +   M++   ++  ++HY  ++D+ G
Sbjct: 344 FRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLG 403

[Close]
BLAST of CmaCh07G008080 vs. Swiss-Prot
Match: PPR70_ARATH (Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28
Identity = 80/268 (29.85%), Postives = 133/268 (49.63%), Query Frame = 1 

Query: 5   FKFNMIVLNAVIDAY-SKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVL 64
           F   ++V  A++ +Y S    +  +  +F +M ERNVV+WT+M+  Y+++  + +   + 
Sbjct: 157 FHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALF 216

Query: 65  SCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEE-KISPNDLTFV---GACVDLGLI 124
             MPE+DV +W A++ +   N    EA+ LF +M+ E  I PN++T V    AC   G +
Sbjct: 217 EDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTL 276

Query: 125 AKGKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLIT-- 184
              K IH    RR+   +          + K G+++ A ++F +  +K   +WNS+I   
Sbjct: 277 QLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCF 336

Query: 185 ---GDKTES--------------------AFLDVLSACSHTGLSSKGLYIPELMEKCCGI 233
              G   E+                     F+ +L+AC+H GL SKG    +LM    GI
Sbjct: 337 ALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGI 396

[Close]
BLAST of CmaCh07G008080 vs. Swiss-Prot
Match: PP167_ARATH (Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.6e-28
Identity = 80/281 (28.47%), Postives = 137/281 (48.75%), Query Frame = 1 

Query: 5   FKFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLS 64
           F  N+++  ++IDAY+KCG+++++   F +M  +++  WT+++  Y++   ++   ++  
Sbjct: 210 FLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFC 269

Query: 65  CMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFVG---ACVDLGLIAK 124
            MPEK+  +WTALI  +V     N ALDLF +M+   + P   TF     A   +  +  
Sbjct: 270 EMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRH 329

Query: 125 GKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEK-DELSWNSLITG-- 184
           GK IHG +IR N   N          +SKSG ++++  +F +  +K D + WN++I+   
Sbjct: 330 GKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALA 389

Query: 185 --------------------DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSL 244
                                   +  + +L+ACSH+GL  +GL   E M    GI    
Sbjct: 390 QHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQ 449

Query: 245 DHYAVLIDMFGRKNRLAEVL-DLMSRAHNGSKHVMGCSFGV 249
           +HYA LID+ GR     E++  +        KH+     GV
Sbjct: 450 EHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGV 490

[Close]
BLAST of CmaCh07G008080 vs. TrEMBL
Match: A0A0A0KFI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476040 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.6e-88
Identity = 181/274 (66.06%), Postives = 202/274 (73.72%), Query Frame = 1 

Query: 6   KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSC 65
           +FNMIV NA++DAY KCG+ D SYSIFS+M+ER+VVTWTSMVVAY+QTS LDD FRV SC
Sbjct: 177 EFNMIVCNAIVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSC 236

Query: 66  MPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFVG---ACVDLGLIAKG 125
           MP K+VHTWTALIN+ V NKY NEALDLF+QMLEEK SPN  TFVG   AC DL LIAKG
Sbjct: 237 MPVKNVHTWTALINALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKG 296

Query: 126 KTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG- 185
           K IHGLIIRR+S LNF             SKSGD+KSAR LFNLILEKD +SWNSLITG 
Sbjct: 297 KEIHGLIIRRSSELNFPNVYVCNALIDLYSKSGDVKSARMLFNLILEKDVVSWNSLITGF 356

Query: 186 ---------------------DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHS 242
                                   +  FL VLSACSHTGLSS+GL I ELMEK   I+ S
Sbjct: 357 AQNGLGREALLAFRKMTEVGIRPNKVTFLAVLSACSHTGLSSEGLCILELMEKFYDIEPS 416

[Close]
BLAST of CmaCh07G008080 vs. TrEMBL
Match: A0A061EFM5_THECC (Pentatricopeptide repeat superfamily protein, putative OS=Theobroma cacao GN=TCM_047043 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.2e-56
Identity = 130/274 (47.45%), Postives = 165/274 (60.22%), Query Frame = 1 

Query: 6   KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSC 65
           + ++IV NA+IDAY KCGE++++Y IF +M ER+VV+WTSMVVAY++ S L+D  RV + 
Sbjct: 173 ELDLIVYNALIDAYGKCGEVNSAYRIFCRMSERDVVSWTSMVVAYAKVSRLEDASRVFNE 232

Query: 66  MPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFV---GACVDLGLIAKG 125
           MP K+  +WT LI  F  N   NEAL+LF QMLEE++ PN  T+V    AC DL  I  G
Sbjct: 233 MPVKNTVSWTGLITGFAQNGRGNEALNLFWQMLEERVQPNAYTYVCVLSACADLARIEIG 292

Query: 126 KTIHGLIIRRNS---GLN----------FSKSGDMKSARTLFNLILEKDELSWNSLITGD 185
           K IHG I+R +S    LN          + K GDM SA+ LF  I EKD +SWNSLITG 
Sbjct: 293 KQIHGHIVRVSSRCDSLNEFVFNALIDMYCKCGDMNSAKLLFARISEKDVVSWNSLITGF 352

Query: 186 KTES----------------------AFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHS 242
                                      FL  LSAC+HTGL S+GL I +LMEK  G+   
Sbjct: 353 AQNGHGEESLDVFRMMIKANTRPNHVTFLGALSACNHTGLVSEGLRILDLMEKDFGVIPR 412

[Close]
BLAST of CmaCh07G008080 vs. TrEMBL
Match: A0A0D2RVF7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G010300 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 8.0e-56
Identity = 128/272 (47.06%), Postives = 160/272 (58.82%), Query Frame = 1 

Query: 8   NMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMP 67
           N+IV NA+IDAY KCGE+D+++ IF++M ER+VV+WTSMVVAY++ S L+D  R+   MP
Sbjct: 39  NLIVYNALIDAYGKCGEVDSAHRIFNRMSERDVVSWTSMVVAYAKVSRLEDAIRIFKEMP 98

Query: 68  EKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFVGA---CVDLGLIAKGKT 127
            K+  +WT+LI  F  N   NEAL+LF QMLEE + PN  TFV     C DL LI KGK 
Sbjct: 99  VKNTVSWTSLITGFAENSCGNEALNLFRQMLEEGVQPNAYTFVSVLSVCADLALIEKGKQ 158

Query: 128 IHGLIIRRNSG---LN----------FSKSGDMKSARTLFNLILEKDELSWNSLITG--- 187
           IH  IIR  S    LN          + K GDM SA+ LF  I EKD +SWNSLITG   
Sbjct: 159 IHAHIIRVGSIHDLLNQFIFNALIDMYCKCGDMNSAKLLFERIHEKDVVSWNSLITGLAQ 218

Query: 188 -------------------DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLD 242
                                    FL  LSACSH GL ++G+ I  LMEK  G+    D
Sbjct: 219 NGHGEDSLNVFRMMIKANIRPNHVTFLGALSACSHAGLVTEGMRILNLMEKGFGVTPRSD 278

[Close]
BLAST of CmaCh07G008080 vs. TrEMBL
Match: A0A067L5P6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03716 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.3e-53
Identity = 123/273 (45.05%), Postives = 163/273 (59.71%), Query Frame = 1 

Query: 6   KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSC 65
           + N+IV NA+IDAY KCGE  T Y IFS M ER+VV+WTSM+ AY++ S +DD F + + 
Sbjct: 147 ELNLIVYNALIDAYGKCGEPSTCYCIFSGMPERDVVSWTSMIAAYARASRMDDAFNIFTE 206

Query: 66  MPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFV---GACVDLGLIAKG 125
           MP K+  +WT+LI  F  N +  +ALD+F QM EE + PN  TFV    AC DL LI +G
Sbjct: 207 MPVKNTVSWTSLIAGFAQNGHSYKALDIFGQMQEEGVQPNTFTFVTILSACADLALIQRG 266

Query: 126 KTIHGLIIRRNSG--------LN-----FSKSGDMKSARTLFNLILEKDELSWNSLITG- 185
           K IHG I RR+          LN     + K G+MKS+  LF  +  K+ +SWNS+ITG 
Sbjct: 267 KQIHGHIFRRSPRSDLCNLYILNALIDMYCKCGEMKSSTMLFEGMPVKNIVSWNSMITGL 326

Query: 186 ------------------DKT---ESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHS 241
                             +KT      FL VL ACSHTGL  +GL I ++MEK   +   
Sbjct: 327 ARNGYAEESLLTFRKMIEEKTMPNHITFLGVLFACSHTGLVCEGLKILDMMEKNYAVNPE 386

[Close]
BLAST of CmaCh07G008080 vs. TrEMBL
Match: A0A068UHM8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00025010001 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 7.0e-52
Identity = 118/274 (43.07%), Postives = 162/274 (59.12%), Query Frame = 1 

Query: 6   KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSC 65
           +F +++ N++IDAY KCG    SY +FS MQER++V+WTS+VVAY+Q   L++  +V   
Sbjct: 178 QFGVVLCNSLIDAYGKCGRPQWSYMVFSHMQERDIVSWTSIVVAYAQAGRLEESCKVFHQ 237

Query: 66  MPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFV---GACVDLGLIAKG 125
           MPE++V +WTALI+ F  N    +AL LF QMLEE + P+  ++V    AC DL L+ +G
Sbjct: 238 MPERNVVSWTALISGFAQNGQGEKALYLFSQMLEEGVVPSAFSYVSVLSACADLALVERG 297

Query: 126 KTIHGLIIRRNSGLN-------------FSKSGDMKSARTLFNLILEKDELSWNSLITG- 185
           K +HG I R  S  +             + K GDM+S+ TLF    +KD ++WNS+ITG 
Sbjct: 298 KQVHGRITRGASTADYHNAYVVNALVDMYCKCGDMRSSMTLFKRFHDKDVVTWNSMITGL 357

Query: 186 ---DKTESA------------------FLDVLSACSHTGLSSKGLYIPELMEKCCGIKHS 242
               + ES+                  FL VLSACSH GL S+G  I + MEK  G    
Sbjct: 358 AQNGQAESSLALFKCMRETRVHPNYVTFLGVLSACSHAGLVSEGFQILDRMEKDFGTVPR 417

[Close]
BLAST of CmaCh07G008080 vs. TAIR10
Match: AT4G14050.1 (AT4G14050.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 137.1 bits (344), Expect = 1.5e-32
Identity = 76/264 (28.79%), Postives = 140/264 (53.03%), Query Frame = 1 

Query: 4   EFKFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVL 63
           E+  + +V ++++D Y+KCG L+++ ++F  ++ +N ++WT+MV  Y+++   ++   + 
Sbjct: 135 EYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 194

Query: 64  SCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPND----LTFVGACVDLGLI 123
             +P K++++WTALI+ FV +    EA  +F +M  E++   D     + VGAC +L   
Sbjct: 195 RILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAAS 254

Query: 124 AKGKTIHGLIIR---------RNSGLN-FSKSGDMKSARTLFNLILEKDELSWNSLITG- 183
             G+ +HGL+I           N+ ++ ++K  D+ +A+ +F+ +  +D +SW SLI G 
Sbjct: 255 IAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGM 314

Query: 184 ---------------------DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHS 232
                                   E  F+ ++ ACSH G   KG  + + M K  GI+ S
Sbjct: 315 AQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPS 374

[Close]
BLAST of CmaCh07G008080 vs. TAIR10
Match: AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-31
Identity = 79/257 (30.74%), Postives = 133/257 (51.75%), Query Frame = 1 

Query: 8   NMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMP 67
           N+ + NA++D Y+KCG ++ +  +F  M+E++ VTWT+M+  Y+ +   +    VL+ MP
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325

Query: 68  EKDVHTWTALINSFVSNKYRNEALDLFEQM-LEEKISPNDLTFV---GACVDLGLIAKGK 127
           +KD+  W ALI+++  N   NEAL +F ++ L++ +  N +T V    AC  +G +  G+
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385

Query: 128 TIHGLIIRRNSGLNF----------SKSGDMKSARTLFNLILEKDELSWNSLITG----- 187
            IH  I +    +NF          SK GD++ +R +FN + ++D   W+++I G     
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445

Query: 188 ---------DKTESA--------FLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHY 229
                     K + A        F +V  ACSHTGL  +   +   ME   GI     HY
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHY 505

[Close]
BLAST of CmaCh07G008080 vs. TAIR10
Match: AT5G59200.1 (AT5G59200.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 128.6 bits (322), Expect = 5.2e-30
Identity = 74/263 (28.14%), Postives = 129/263 (49.05%), Query Frame = 1 

Query: 15  VIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSCMPEKDVHTW 74
           +++ Y K GEL  +  +F +M +R+ V  T M+  YS+   + +   +   +  KD   W
Sbjct: 164 MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCW 223

Query: 75  TALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFV---GACVDLGLIAKGKTIHGLIIR 134
           TA+I+  V NK  N+AL+LF +M  E +S N+ T V    AC DLG +  G+ +H  +  
Sbjct: 224 TAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVEN 283

Query: 135 RNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLITGDKTESAFLD---- 194
           +   L+          +S+ GD+  AR +F ++ +KD +S+N++I+G     A ++    
Sbjct: 284 QRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINE 343

Query: 195 ------------------VLSACSHTGLSSKGLYIPELMEKCCGIKHSLDHYAVLIDMFG 243
                             +L+ACSH GL   GL +   M++   ++  ++HY  ++D+ G
Sbjct: 344 FRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLG 403

[Close]
BLAST of CmaCh07G008080 vs. TAIR10
Match: AT1G33350.1 (AT1G33350.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 128.3 bits (321), Expect = 6.8e-30
Identity = 80/268 (29.85%), Postives = 133/268 (49.63%), Query Frame = 1 

Query: 5   FKFNMIVLNAVIDAY-SKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVL 64
           F   ++V  A++ +Y S    +  +  +F +M ERNVV+WT+M+  Y+++  + +   + 
Sbjct: 157 FHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALF 216

Query: 65  SCMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEE-KISPNDLTFV---GACVDLGLI 124
             MPE+DV +W A++ +   N    EA+ LF +M+ E  I PN++T V    AC   G +
Sbjct: 217 EDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTL 276

Query: 125 AKGKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEKDELSWNSLIT-- 184
              K IH    RR+   +          + K G+++ A ++F +  +K   +WNS+I   
Sbjct: 277 QLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCF 336

Query: 185 ---GDKTES--------------------AFLDVLSACSHTGLSSKGLYIPELMEKCCGI 233
              G   E+                     F+ +L+AC+H GL SKG    +LM    GI
Sbjct: 337 ALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGI 396

[Close]
BLAST of CmaCh07G008080 vs. TAIR10
Match: AT2G21090.1 (AT2G21090.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 127.9 bits (320), Expect = 8.8e-30
Identity = 80/281 (28.47%), Postives = 137/281 (48.75%), Query Frame = 1 

Query: 5   FKFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLS 64
           F  N+++  ++IDAY+KCG+++++   F +M  +++  WT+++  Y++   ++   ++  
Sbjct: 210 FLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFC 269

Query: 65  CMPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFVG---ACVDLGLIAK 124
            MPEK+  +WTALI  +V     N ALDLF +M+   + P   TF     A   +  +  
Sbjct: 270 EMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRH 329

Query: 125 GKTIHGLIIRRNSGLN----------FSKSGDMKSARTLFNLILEK-DELSWNSLITG-- 184
           GK IHG +IR N   N          +SKSG ++++  +F +  +K D + WN++I+   
Sbjct: 330 GKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALA 389

Query: 185 --------------------DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHSL 244
                                   +  + +L+ACSH+GL  +GL   E M    GI    
Sbjct: 390 QHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQ 449

Query: 245 DHYAVLIDMFGRKNRLAEVL-DLMSRAHNGSKHVMGCSFGV 249
           +HYA LID+ GR     E++  +        KH+     GV
Sbjct: 450 EHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGV 490

[Close]
BLAST of CmaCh07G008080 vs. NCBI nr
Match: gi|659125375|ref|XP_008462654.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g21090-like isoform X1 [Cucumis melo])

HSP 1 Score: 337.0 bits (863), Expect = 2.7e-89
Identity = 181/274 (66.06%), Postives = 203/274 (74.09%), Query Frame = 1 

Query: 6   KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSC 65
           +FN+IV NA++DAY KCG+ D SYSIFS+M+ER+VVTWTSMVVAY+QTS LDD FRV SC
Sbjct: 177 EFNLIVCNAIVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSC 236

Query: 66  MPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFVG---ACVDLGLIAKG 125
           MP K+VHTWTALIN+ V NKY NEALDLF+QMLEEK SPN  TFVG   AC DL LIAKG
Sbjct: 237 MPVKNVHTWTALINALVKNKYSNEALDLFQQMLEEKNSPNAFTFVGVLSACADLALIAKG 296

Query: 126 KTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITGD 185
           K IHGLIIRR+S LNF             SKSGDMKSAR LFNLILEKD +SWNSLITG 
Sbjct: 297 KEIHGLIIRRSSDLNFPNVYVCNALIDLYSKSGDMKSARMLFNLILEKDVVSWNSLITGF 356

Query: 186 K----------------------TESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHS 242
                                   +  FL VLSACSHTGLSS+GLYI ELMEK   IK S
Sbjct: 357 AQNGLGREALLAFQKMTEVGIRPNKVTFLGVLSACSHTGLSSEGLYILELMEKSYDIKPS 416

[Close]
BLAST of CmaCh07G008080 vs. NCBI nr
Match: gi|659125379|ref|XP_008462657.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g21090-like isoform X2 [Cucumis melo])

HSP 1 Score: 337.0 bits (863), Expect = 2.7e-89
Identity = 181/274 (66.06%), Postives = 203/274 (74.09%), Query Frame = 1 

Query: 6   KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSC 65
           +FN+IV NA++DAY KCG+ D SYSIFS+M+ER+VVTWTSMVVAY+QTS LDD FRV SC
Sbjct: 177 EFNLIVCNAIVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSC 236

Query: 66  MPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFVG---ACVDLGLIAKG 125
           MP K+VHTWTALIN+ V NKY NEALDLF+QMLEEK SPN  TFVG   AC DL LIAKG
Sbjct: 237 MPVKNVHTWTALINALVKNKYSNEALDLFQQMLEEKNSPNAFTFVGVLSACADLALIAKG 296

Query: 126 KTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITGD 185
           K IHGLIIRR+S LNF             SKSGDMKSAR LFNLILEKD +SWNSLITG 
Sbjct: 297 KEIHGLIIRRSSDLNFPNVYVCNALIDLYSKSGDMKSARMLFNLILEKDVVSWNSLITGF 356

Query: 186 K----------------------TESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHS 242
                                   +  FL VLSACSHTGLSS+GLYI ELMEK   IK S
Sbjct: 357 AQNGLGREALLAFQKMTEVGIRPNKVTFLGVLSACSHTGLSSEGLYILELMEKSYDIKPS 416

[Close]
BLAST of CmaCh07G008080 vs. NCBI nr
Match: gi|700193109|gb|KGN48313.1| (hypothetical protein Csa_6G476040 [Cucumis sativus])

HSP 1 Score: 334.0 bits (855), Expect = 2.3e-88
Identity = 181/274 (66.06%), Postives = 202/274 (73.72%), Query Frame = 1 

Query: 6   KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSC 65
           +FNMIV NA++DAY KCG+ D SYSIFS+M+ER+VVTWTSMVVAY+QTS LDD FRV SC
Sbjct: 177 EFNMIVCNAIVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSC 236

Query: 66  MPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFVG---ACVDLGLIAKG 125
           MP K+VHTWTALIN+ V NKY NEALDLF+QMLEEK SPN  TFVG   AC DL LIAKG
Sbjct: 237 MPVKNVHTWTALINALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKG 296

Query: 126 KTIHGLIIRRNSGLNF-------------SKSGDMKSARTLFNLILEKDELSWNSLITG- 185
           K IHGLIIRR+S LNF             SKSGD+KSAR LFNLILEKD +SWNSLITG 
Sbjct: 297 KEIHGLIIRRSSELNFPNVYVCNALIDLYSKSGDVKSARMLFNLILEKDVVSWNSLITGF 356

Query: 186 ---------------------DKTESAFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHS 242
                                   +  FL VLSACSHTGLSS+GL I ELMEK   I+ S
Sbjct: 357 AQNGLGREALLAFRKMTEVGIRPNKVTFLAVLSACSHTGLSSEGLCILELMEKFYDIEPS 416

[Close]
BLAST of CmaCh07G008080 vs. NCBI nr
Match: gi|1000972856|ref|XP_015572989.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Ricinus communis])

HSP 1 Score: 228.8 bits (582), Expect = 1.0e-56
Identity = 130/274 (47.45%), Postives = 169/274 (61.68%), Query Frame = 1 

Query: 6   KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSC 65
           +FN+IV NA+ID+Y KCG+ +TSY IFS+M ER+VV+WTSMV AY++ S +DD FR+   
Sbjct: 173 EFNVIVYNALIDSYGKCGQHNTSYCIFSRMFERDVVSWTSMVDAYARASRMDDAFRLFME 232

Query: 66  MPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFV---GACVDLGLIAKG 125
           MP K+  +WT+LI  F  N +  +AL+LF QM EE + P+  TFV   GAC DL LI +G
Sbjct: 233 MPVKNTVSWTSLIAGFAKNGHSYKALELFLQMQEENVLPSAFTFVTVLGACADLALIERG 292

Query: 126 KTIHGLIIRRNSGLN-------------FSKSGDMKSARTLFNLILEKDELSWNSLITG- 185
           K IHG IIR +   +             + K GDMKS+++LF  + EKD +SWNSLITG 
Sbjct: 293 KQIHGHIIRSSGRTDLFNMYVYNALIDMYCKCGDMKSSKSLFEGMSEKDIVSWNSLITGL 352

Query: 186 ----DKTES-----------------AFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHS 242
                  ES                  F  VLSACSHTGL S+GL I + MEK  GI   
Sbjct: 353 AQNGHAEESLDLFRKMVEGNRLPNHVTFSGVLSACSHTGLVSEGLQILDAMEKRYGIVPK 412

[Close]
BLAST of CmaCh07G008080 vs. NCBI nr
Match: gi|590650879|ref|XP_007032755.1| (Pentatricopeptide repeat superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 228.0 bits (580), Expect = 1.8e-56
Identity = 130/274 (47.45%), Postives = 165/274 (60.22%), Query Frame = 1 

Query: 6   KFNMIVLNAVIDAYSKCGELDTSYSIFSQMQERNVVTWTSMVVAYSQTSMLDDVFRVLSC 65
           + ++IV NA+IDAY KCGE++++Y IF +M ER+VV+WTSMVVAY++ S L+D  RV + 
Sbjct: 173 ELDLIVYNALIDAYGKCGEVNSAYRIFCRMSERDVVSWTSMVVAYAKVSRLEDASRVFNE 232

Query: 66  MPEKDVHTWTALINSFVSNKYRNEALDLFEQMLEEKISPNDLTFV---GACVDLGLIAKG 125
           MP K+  +WT LI  F  N   NEAL+LF QMLEE++ PN  T+V    AC DL  I  G
Sbjct: 233 MPVKNTVSWTGLITGFAQNGRGNEALNLFWQMLEERVQPNAYTYVCVLSACADLARIEIG 292

Query: 126 KTIHGLIIRRNS---GLN----------FSKSGDMKSARTLFNLILEKDELSWNSLITGD 185
           K IHG I+R +S    LN          + K GDM SA+ LF  I EKD +SWNSLITG 
Sbjct: 293 KQIHGHIVRVSSRCDSLNEFVFNALIDMYCKCGDMNSAKLLFARISEKDVVSWNSLITGF 352

Query: 186 KTES----------------------AFLDVLSACSHTGLSSKGLYIPELMEKCCGIKHS 242
                                      FL  LSAC+HTGL S+GL I +LMEK  G+   
Sbjct: 353 AQNGHGEESLDVFRMMIKANTRPNHVTFLGALSACNHTGLVSEGLRILDLMEKDFGVIPR 412

The following BLAST results are available for this feature:
BLAST of CmaCh07G008080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP308_ARATH2.6e-3128.79Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidop... [more]
PP175_ARATH3.7e-3030.74Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
PP435_ARATH9.2e-2928.14Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS... [more]
PPR70_ARATH1.2e-2829.85Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana GN... [more]
PP167_ARATH1.6e-2828.47Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana GN... [more]
BLAST of CmaCh07G008080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFI0_CUCSA1.6e-8866.06Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476040 PE=4 SV=1[more]
A0A061EFM5_THECC1.2e-5647.45Pentatricopeptide repeat superfamily protein, putative OS=Theobroma cacao GN=TCM... [more]
A0A0D2RVF7_GOSRA8.0e-5647.06Uncharacterized protein OS=Gossypium raimondii GN=B456_006G010300 PE=4 SV=1[more]
A0A067L5P6_JATCU1.3e-5345.05Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03716 PE=4 SV=1[more]
A0A068UHM8_COFCA7.0e-5243.07Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00025010001 PE=4 SV=1[more]
BLAST of CmaCh07G008080 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G14050.11.5e-3228.79 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G29760.12.1e-3130.74 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G59200.15.2e-3028.14 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G33350.16.8e-3029.85 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT2G21090.18.8e-3028.47 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
BLAST of CmaCh07G008080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659125375|ref|XP_008462654.1|2.7e-8966.06PREDICTED: pentatricopeptide repeat-containing protein At2g21090-like isoform X1... [more]
gi|659125379|ref|XP_008462657.1|2.7e-8966.06PREDICTED: pentatricopeptide repeat-containing protein At2g21090-like isoform X2... [more]
gi|700193109|gb|KGN48313.1|2.3e-8866.06hypothetical protein Csa_6G476040 [Cucumis sativus][more]
gi|1000972856|ref|XP_015572989.1|1.0e-5647.45PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Ricinus commun... [more]
gi|590650879|ref|XP_007032755.1|1.8e-5647.45Pentatricopeptide repeat superfamily protein, putative [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G008080.1CmaCh07G008080.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 12..40
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 69..109
score: 7.2
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 72..105
score: 1.6E-8coord: 11..41
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 207..241
score: 5.864coord: 70..104
score: 11.531coord: 8..42
score: 10
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 5..233
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh07G008080Cla008416Watermelon (97103) v1cmawmB824
CmaCh07G008080Csa6G476040Cucumber (Chinese Long) v2cmacuB875
CmaCh07G008080ClCG01G015180Watermelon (Charleston Gray)cmawcgB754
CmaCh07G008080CSPI06G26000Wild cucumber (PI 183967)cmacpiB891
CmaCh07G008080Bhi03G001355Wax gourdcmawgoB1062
CmaCh07G008080Carg10526Silver-seed gourdcarcmaB0335
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh07G008080Cucurbita maxima (Rimu)cmacmaB523
CmaCh07G008080Cucurbita moschata (Rifu)cmacmoB875
CmaCh07G008080Cucurbita moschata (Rifu)cmacmoB858
CmaCh07G008080Melon (DHL92) v3.5.1cmameB799
CmaCh07G008080Cucurbita pepo (Zucchini)cmacpeB866
CmaCh07G008080Cucurbita pepo (Zucchini)cmacpeB880
CmaCh07G008080Bottle gourd (USVL1VR-Ls)cmalsiB786
CmaCh07G008080Cucumber (Gy14) v2cgybcmaB861
CmaCh07G008080Melon (DHL92) v3.6.1cmamedB900
CmaCh07G008080Silver-seed gourdcarcmaB1130
CmaCh07G008080Cucumber (Chinese Long) v3cmacucB1036
CmaCh07G008080Watermelon (97103) v2cmawmbB875
CmaCh07G008080Wax gourdcmawgoB1074