CmaCh07G004630 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh07G004630
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
Descriptionfolate transporter 1
LocationCma_Chr07 : 2012391 .. 2015635 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCCCAAAGGATAGATACTCTCAAAGAGAGTGAAGAGAACCAGCAACCAAACCAATAAATAAAAGATTTCCAAAAAATACATACTCCCAAAGGGAGTGAAGAGAACCAGTAACTGAACCAATAAGTAAAAGATTCCCAAAGGATACATACTCCCGAAGGGAGTGAAGAGAACCAGCAACCAAACCAATAAGGAAAAGATTCTCAAAGGATACAATAGCCAAAATAAAACATCAAGGAATGAAGTGCCCAGGTGACAAACAAACAAGCAAACAAACAAAATTGTTCTAAAAGCAAGGCTGCTTAACTGAAGAGCCATTGAAGCTAGAACCATATACAAACCAGCTCCTAAACGGCTAAACCACTGTTCATAGGACAAAACTCAGCGAGAAAGCCTTGCAGACTCCAGGAAGAAAGGCTACTCCAACTCCCTTTCAAGTCCACGAGGAACATTGAAAGCAAACCCCTTCTCAGACAAAGGACCTGCTGCAAGCTTTAAAAATTTACAAAGGTCATCAATAATATCTGAAGAATCTTTTGGAGCTTCTGAAGTGTTGAGATCAGCATTAGTAATAGAGTTAATTCCCTTGATGAAGGATATAAAAGCCCTTCATCGCTTGAATCTTTGGAAAAGTCATGCAGATTCCTTTCAAAATTAGAATCAATGCTAATAACTCTACCAACTGGATCATTACTAAAATCCAAACTATCCTCCTCTAAAGCACCTTTGATATCCTCAAATGAGAAAAGGGAAAAAAAGTACCAAGGGAAAGGGATCGGTCCCCTTCGAGAATTATTAAAAAAACTCAATAAATTTTGTAATATCCTCAAACGAGCTCAAATCTCTAATACTAGAGGGAGGGGCAACCGACTTTGAACCATCCTTGAGGCCTCTTCAGCTAAAGACGAGGGAAAGGCTATTAGTTTGCAACTGTTGTAGTGAACTTGTGATATAATTATCCTACTTGTGATTTAAGTACATAACTGAAGTCTGTCCAAGCGATTGACTAATTTATTAACATTTTCTTTGTTGGCTGAACATTTCATCTAGTCTTTCAAACTCCATTAAATGTTTTCCCCGTTTTATGGTAGCTATGGCAGAGCCAAACAAATATATTCAGACAATGAAAAGAACTTGAGTCCCAGGCTTCATCTTGTTTCTGCAGCAGAAGCAGGAGCTTTGGTGAGTCCAACATGAAGCTCTGCAATACCTTCCTGGACCTTTTATGCTTTTTACGTCAAACAATTCCATTATTGCACTTTTGACTTACTAGAAAAGTGCTTCTCTATCCTCATTTTATTAGAGTTTTTAGTTTTTATTATGTTAACAATTGTGGTTCTACTGCCTCTTCAGGTTTGTTTTTTGCACAAATCCAGTTTGGCTTGTGAAAACAAGAATGCAGCTTCAGAATCCTCTTCATCAAGCGCAACCTTATTCTGGGCTATATGGTCTGCCCTTCTATCTTAATATGCTCTCTGGGATATATCTTATCCTAGTAAATTACAAGGTCTTGTGATTTGTATTCAAGTTAAGCTTCAGTATTTCATATTTTCCCCCTTCTCTCCCACTGTGTCGTGATAATGTTTAATGGCTTATAATGATGATGATGTGATGATTTTTACTTCGAAAACTGTGACGGTTGTTTTAAGTTAAGCTTCAGTTGTTTTATCTAGTCTACCTTGATTTTTTAGACTTGTCAAAGAATGAAAGCTTTTCAAAGAAACAATTCATCAAAAAGAGAGAATAAATAAGGGAAACAACAAGATCCAAACCCATTCATAAACCGAAGGATTTTGCTAAAAATTCTCCTCTTGGTTTTGTTTAGAAAGGAGTAATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAGAGAAGAAAAAAAGATTGTTCCTGGCCTTTTCCTTGTAAGCTGTTTGGATTTAGGTTATGTTTTCTCTTAACAGTGTGATTATTTTGCTTCTCCAGAGTAATCTTATTATATTACTTAGTTTTTGTAACCCATTGGTTTTGTGAGGATATCTCATCTCCCCCTTTTTTTTTTGCAATTTTGGCTCCGTTAATAGCATCATACGTTTCCTATCTATCCATCTATTTATCAGTACATATATGCATATTGGTTAAACTTTCGTGGCTTCCATTCATATCATTGTACTCTAATTTTCATTTTATCAAATATGGGCTCTTGGGATCAGTTTTTTTTTGTTCTTTTCTTCCTTTATTCCTTTTTTTCCTTCCTATTTCTTGTGGGGTTGTAAAAATGTTGTTGAGGGTTTTTATGGAATGGGAGAGTGTTTGTACATTTGTCATAAAAAGGCATTCTGTTGACAGAATTTCATGGAATTAGTTCATAGATGTGTTTGGTTGCTTCAGCAGGTTTCTCATGGTGCATTTACAGTTTATGAAGAACTCCGTACATTTATTGCCAACTCGAGGTCTGATGGACCAAAGTGAATTCTCAAAGTTCTGGGGAATTACTGGTACAAGTTTCTGGCTTGAGTTTACCAACACCACTATATTGAGTTCTAGGAGAAGTGGAAATGTGAGATCCCACGTCTATTGGAGAGGGGAACGAATCATTCCTTTAAGGGTGTGGAAACCTCTCCCTAGTGGACACATTTTAAAACCTTGAGGGGAAGCTCAAAAGGGAAAACCTAAAGAGAATAATATCTGCTAGCGGTGGCCTTGGGTTGTTGCAAATGGTATCAGAGCTAGATACCGAATGGTGTGCCGCGAGGAGCTGGACCCTCAAGGGGGGTGGATTGTGAGATCCCACATTGGTTGAAGAGGGGAACGAAGCACATTCCTTATAAGAGTGTGGAAACCTCTTCCTAGTGGACGCGTTTTAAAACCTTGAGAGATAGCTCGAAAGGGAAAGCCCAAAAAGGATAATATCTTCTAGCGGTGACCTTGTGCTGTTACAGGAAATATTTATTTGATCTAGCCTATAGCGTATAACCTTTTCAGATGCTTGTCCTCCATATAGCTAATCATACAATAGTATATTCGAGTATATCTTAGCCTCTTCCATTCACCTAGGGTATATTCTTGCAATGATCATAAATTATAAGCAACATTCAGATGACATAAAAACCATTGCCTTTTAAGAACCTTACTCCATTAGTTCTAGTCTTCGCCACATGAAATATAAACTCTTACTGTGGGTTTTTTTCATGCAGAATTCAGTTGA

mRNA sequence

ATTCCCAAAGGATAGATACTCTCAAAGAGAGTGAAGAGAACCAGCAACCAAACCAATAAATAAAAGATTTCCAAAAAATACATACTCCCAAAGGGAGTGAAGAGAACCAGTAACTGAACCAATAAGTAAAAGATTCCCAAAGGATACATACTCCCGAAGGGAGTGAAGAGAACCAGCAACCAAACCAATAAGGAAAAGATTCTCAAAGGATACAATAGCCAAAATAAAACATCAAGGAATGAAGTGCCCAGGTGACAAACAAACAAGCAAACAAACAAAATTGTTCTAAAAGCAAGGCTGCTTAACTGAAGAGCCATTGAAGCTAGAACCATATACAAACCAGCTCCTAAACGGCTAAACCACTGTTCATAGGACAAAACTCAGCGAGAAAGCCTTGCAGACTCCAGGAAGAAAGGCTACTCCAACTCCCTTTCAAGTCCACGAGGAACATTGAAAGCAAACCCCTTCTCAGACAAAGGACCTGCTGCAAGCTTTAAAAATTTACAAAGGTCATCAATAATATCTGAAGAATCTTTTGGAGCTTCTGAAGTGTTGAGATCAGCATTAGTAATAGAGTTAATTCCCTTGATGAAGGATATAAAAGCCCTTCATCGCTTGAATCTTTGGAAAAGTCATGCAGATTCCTTTCAAAATTAGAATCAATGCTAATAACTCTACCAACTGGATCATTACTAAAATCCAAACTATCCTCCTCTAAAGCACCTTTGATATCCTCAAATGAGAAAAGGGAAAAAAAGTACCAAGGGAAAGGGATCGGTCCCCTTCGAGAATTATTAAAAAAACTCAATAAATTTTGTAATATCCTCAAACGAGCTCAAATCTCTAATACTAGAGGGAGGGGCAACCGACTTTGAACCATCCTTGAGGCCTCTTCAGCTAAAGACGAGGGAAAGGCTATTAGTTTGCAACTGTTGTAGTGAACTTGTGATATAATTATCCTACTTGTGATTTAAGTACATAACTGAAGTCTGTCCAAGCGATTGACTAATTTATTAACATTTTCTTTGTTGGCTGAACATTTCATCTAGTCTTTCAAACTCCATTAAATGTTTTCCCCGTTTTATGGTAGCTATGGCAGAGCCAAACAAATATATTCAGACAATGAAAAGAACTTGAGTCCCAGGCTTCATCTTGTTTCTGCAGCAGAAGCAGGAGCTTTGGTTTGTTTTTTGCACAAATCCAGTTTGGCTTGTGAAAACAAGAATGCAGCTTCAGAATCCTCTTCATCAAGCGCAACCTTATTCTGGGCTATATGCAGGTTTCTCATGGTGCATTTACAGTTTATGAAGAACTCCGTACATTTATTGCCAACTCGAGGTCTGATGGACCAAAGTGAATTCTCAAAGTTCTGGGGAATTACTGAATTCAGTTGA

Coding sequence (CDS)

ATGTTTTCCCCGTTTTATGGTAGCTATGGCAGAGCCAAACAAATATATTCAGACAATGAAAAGAACTTGAGTCCCAGGCTTCATCTTGTTTCTGCAGCAGAAGCAGGAGCTTTGGTTTGTTTTTTGCACAAATCCAGTTTGGCTTGTGAAAACAAGAATGCAGCTTCAGAATCCTCTTCATCAAGCGCAACCTTATTCTGGGCTATATGCAGGTTTCTCATGGTGCATTTACAGTTTATGAAGAACTCCGTACATTTATTGCCAACTCGAGGTCTGATGGACCAAAGTGAATTCTCAAAGTTCTGGGGAATTACTGAATTCAGTTGA

Protein sequence

MFSPFYGSYGRAKQIYSDNEKNLSPRLHLVSAAEAGALVCFLHKSSLACENKNAASESSSSSATLFWAICRFLMVHLQFMKNSVHLLPTRGLMDQSEFSKFWGITEFS
Homology
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BLAST of CmaCh07G004630 vs. NCBI nr
Match: gi|10177519|dbj|BAB10914.1| (unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 65.1 bits (157), Expect = 8.7e-08
Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 1 

Query: 5   FYGSYGRAKQIYS---DNEKNLSPRLHLVSAAEAGALVC-----FLHKSSLACENKNAAS 64
           ++  YGRAKQ Y+   D+EK LSP LHL SAAEAGAL       F+HKS LAC+NK  AS
Sbjct: 84  YFFFYGRAKQRYARGRDDEK-LSPALHLASAAEAGALGMMLSGLFMHKSYLACQNKVTAS 143

Query: 65  ESSSSSATLFWAI 70
           ++SSS++T+  AI
Sbjct: 144 DTSSSNSTILRAI 155

The following BLAST results are available for this feature:
BLAST of CmaCh07G004630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh07G004630 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of CmaCh07G004630 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh07G004630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|10177519|dbj|BAB10914.1|8.7e-0856.16unnamed protein product [Arabidopsis thaliana][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G004630.1CmaCh07G004630.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh07G004630CmoCh07G004610Cucurbita moschata (Rifu)cmacmoB875
CmaCh07G004630Cp4.1LG19g09190Cucurbita pepo (Zucchini)cmacpeB880
CmaCh07G004630Bhi03G000682Wax gourdcmawgoB1058
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh07G004630Cucurbita maxima (Rimu)cmacmaB070
CmaCh07G004630Cucurbita maxima (Rimu)cmacmaB205
CmaCh07G004630Cucurbita maxima (Rimu)cmacmaB437
CmaCh07G004630Cucurbita maxima (Rimu)cmacmaB523
CmaCh07G004630Cucumber (Gy14) v1cgycmaB0048
CmaCh07G004630Cucumber (Gy14) v1cgycmaB0945
CmaCh07G004630Cucurbita moschata (Rifu)cmacmoB843
CmaCh07G004630Cucurbita moschata (Rifu)cmacmoB852
CmaCh07G004630Cucurbita moschata (Rifu)cmacmoB858
CmaCh07G004630Wild cucumber (PI 183967)cmacpiB875
CmaCh07G004630Wild cucumber (PI 183967)cmacpiB881
CmaCh07G004630Wild cucumber (PI 183967)cmacpiB893
CmaCh07G004630Cucumber (Chinese Long) v2cmacuB858
CmaCh07G004630Cucumber (Chinese Long) v2cmacuB864
CmaCh07G004630Cucumber (Chinese Long) v2cmacuB877
CmaCh07G004630Melon (DHL92) v3.5.1cmameB791
CmaCh07G004630Melon (DHL92) v3.5.1cmameB797
CmaCh07G004630Melon (DHL92) v3.5.1cmameB809
CmaCh07G004630Watermelon (Charleston Gray)cmawcgB754
CmaCh07G004630Watermelon (Charleston Gray)cmawcgB772
CmaCh07G004630Watermelon (Charleston Gray)cmawcgB774
CmaCh07G004630Watermelon (97103) v1cmawmB826
CmaCh07G004630Watermelon (97103) v1cmawmB821
CmaCh07G004630Watermelon (97103) v1cmawmB822
CmaCh07G004630Cucurbita pepo (Zucchini)cmacpeB866
CmaCh07G004630Cucurbita pepo (Zucchini)cmacpeB876
CmaCh07G004630Cucurbita pepo (Zucchini)cmacpeB882
CmaCh07G004630Bottle gourd (USVL1VR-Ls)cmalsiB786
CmaCh07G004630Bottle gourd (USVL1VR-Ls)cmalsiB804
CmaCh07G004630Bottle gourd (USVL1VR-Ls)cmalsiB806
CmaCh07G004630Bottle gourd (USVL1VR-Ls)cmalsiB808
CmaCh07G004630Cucumber (Gy14) v2cgybcmaB266
CmaCh07G004630Cucumber (Gy14) v2cgybcmaB453
CmaCh07G004630Cucumber (Gy14) v2cgybcmaB861
CmaCh07G004630Melon (DHL92) v3.6.1cmamedB885
CmaCh07G004630Melon (DHL92) v3.6.1cmamedB892
CmaCh07G004630Melon (DHL92) v3.6.1cmamedB907
CmaCh07G004630Silver-seed gourdcarcmaB0571
CmaCh07G004630Silver-seed gourdcarcmaB1056
CmaCh07G004630Silver-seed gourdcarcmaB1295
CmaCh07G004630Silver-seed gourdcarcmaB1360
CmaCh07G004630Cucumber (Chinese Long) v3cmacucB1010
CmaCh07G004630Cucumber (Chinese Long) v3cmacucB1015
CmaCh07G004630Cucumber (Chinese Long) v3cmacucB1035
CmaCh07G004630Watermelon (97103) v2cmawmbB875
CmaCh07G004630Watermelon (97103) v2cmawmbB901
CmaCh07G004630Watermelon (97103) v2cmawmbB904
CmaCh07G004630Wax gourdcmawgoB1085