CmaCh07G001280 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh07G001280
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Chlorophyll a-b binding protein 21, chloroplastic
Location	Cma_Chr07 : 661812 .. 662609 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCTTCCACAATGGCTCTCTCCTCCCCATCTCTGGCCGGCAAGCCCATCAAGCTCTCCCCCAACGCCCCCGACGTTCAGGGCAGTTCAAGAATCAGCATGAGGAAGACCGCCTCCAAGCAAGTTTCCTCCGGCAGCCCATGGTACGGCCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCACCATCCTACCTCACCGGAGAATTCCCCGGTGACTACGGCTGGGACACCGCTGGACTTTCAGCCGACCCCGAGACTTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGGTGGGCCATGCTTGGAGCTTTGGGCTGTGTCTTCCCCGAGCTTCTCTCCCGCAACGGCGTGAAGTTCGGCGAGGCCGTGTGGTTCAAGGCTGGATCTCAGATCTTCAGCGAGGGAGGTCTCGACTACTTGGGCAACCCCAGCTTGGTCCACGCACAGAGCATTCTGGCCATCTGGGCCTGCCAGGTCGTGTTGATGGGCGCCGTTGAGGGCTACCGTATTGCCGGCGGTCCCCTCGGGGAGATCACCGACCCCATCTACCCAGGTGGAAGCTTCGACCCATTGGGTTTGGCCGATGACCCGGAGGCCTTCGCAGAGCTGAAGGTGAAGGAGCTCAAGAACGGAAGGCTCGCCATGTTCTCCATGTTCGGCTTCTTCGTTCAGGCCATTGTCACTGGAAAGGGACCATTGGAGAACTTGGCTGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGTCCTACGCCACAAACTTCGTTCCCGGCAAGTGA

mRNA sequence

ATGGCCGCTTCCACAATGGCTCTCTCCTCCCCATCTCTGGCCGGCAAGCCCATCAAGCTCTCCCCCAACGCCCCCGACGTTCAGGGCAGTTCAAGAATCAGCATGAGGAAGACCGCCTCCAAGCAAGTTTCCTCCGGCAGCCCATGGTACGGCCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCACCATCCTACCTCACCGGAGAATTCCCCGGTGACTACGGCTGGGACACCGCTGGACTTTCAGCCGACCCCGAGACTTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGGTGGGCCATGCTTGGAGCTTTGGGCTGTGTCTTCCCCGAGCTTCTCTCCCGCAACGGCGTGAAGTTCGGCGAGGCCGTGTGGTTCAAGGCTGGATCTCAGATCTTCAGCGAGGGAGGTCTCGACTACTTGGGCAACCCCAGCTTGGTCCACGCACAGAGCATTCTGGCCATCTGGGCCTGCCAGGTCGTGTTGATGGGCGCCGTTGAGGGCTACCGTATTGCCGGCGGTCCCCTCGGGGAGATCACCGACCCCATCTACCCAGGTGGAAGCTTCGACCCATTGGGTTTGGCCGATGACCCGGAGGCCTTCGCAGAGCTGAAGGTGAAGGAGCTCAAGAACGGAAGGCTCGCCATGTTCTCCATGTTCGGCTTCTTCGTTCAGGCCATTGTCACTGGAAAGGGACCATTGGAGAACTTGGCTGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGTCCTACGCCACAAACTTCGTTCCCGGCAAGTGA

Coding sequence (CDS)

ATGGCCGCTTCCACAATGGCTCTCTCCTCCCCATCTCTGGCCGGCAAGCCCATCAAGCTCTCCCCCAACGCCCCCGACGTTCAGGGCAGTTCAAGAATCAGCATGAGGAAGACCGCCTCCAAGCAAGTTTCCTCCGGCAGCCCATGGTACGGCCCCGACCGTGTCAAGTACTTGGGCCCATTCTCCGGCGAGCCACCATCCTACCTCACCGGAGAATTCCCCGGTGACTACGGCTGGGACACCGCTGGACTTTCAGCCGACCCCGAGACTTTCGCCAAGAACCGTGAGCTCGAAGTGATCCACTCCAGGTGGGCCATGCTTGGAGCTTTGGGCTGTGTCTTCCCCGAGCTTCTCTCCCGCAACGGCGTGAAGTTCGGCGAGGCCGTGTGGTTCAAGGCTGGATCTCAGATCTTCAGCGAGGGAGGTCTCGACTACTTGGGCAACCCCAGCTTGGTCCACGCACAGAGCATTCTGGCCATCTGGGCCTGCCAGGTCGTGTTGATGGGCGCCGTTGAGGGCTACCGTATTGCCGGCGGTCCCCTCGGGGAGATCACCGACCCCATCTACCCAGGTGGAAGCTTCGACCCATTGGGTTTGGCCGATGACCCGGAGGCCTTCGCAGAGCTGAAGGTGAAGGAGCTCAAGAACGGAAGGCTCGCCATGTTCTCCATGTTCGGCTTCTTCGTTCAGGCCATTGTCACTGGAAAGGGACCATTGGAGAACTTGGCTGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGTCCTACGCCACAAACTTCGTTCCCGGCAAGTGA

Protein sequence

MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

Homology

[Close]

BLAST of CmaCh07G001280 vs. Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 3.2e-144
Identity = 241/255 (94.51%), Postives = 252/255 (98.82%), Query Frame = 1


Query: 11  PSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGPFSGEPPSYLT 70
           P+LAG+ +KLSPNAP++QG+++ +MRKTASK VSSGSPWYGPDRVKYLGPFSGEPPSYLT
Sbjct: 1   PTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLT 60

Query: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 130
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW
Sbjct: 61  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVW 120

Query: 131 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEITDPIYP 190
           FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGE+TDPIYP
Sbjct: 121 FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYP 180

Query: 191 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250
           GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV
Sbjct: 181 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 240

Query: 251 NNNAWSYATNFVPGK 266
           NNNAW+YATNFVPGK
Sbjct: 241 NNNAWAYATNFVPGK 255

[Close]

BLAST of CmaCh07G001280 vs. Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 3.5e-143
Identity = 245/264 (92.80%), Postives = 255/264 (96.59%), Query Frame = 1


Query: 2   AASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGPF 61
           AAS+MALSSPSLAGK +KL P+AP+V    R+SMRKT +KQVSSGSPWYGPDRVKYLGPF
Sbjct: 3   AASSMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPF 62

Query: 62  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 121
           SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN
Sbjct: 63  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 122

Query: 122 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPL 181
           GVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAVEGYRIAGGPL
Sbjct: 123 GVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPL 182

Query: 182 GEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 241
           GE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN
Sbjct: 183 GEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN 242

Query: 242 LADHLADPVNNNAWSYATNFVPGK 266
           LADHLA PVNNNAW+YATNFVPGK
Sbjct: 243 LADHLAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of CmaCh07G001280 vs. Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 2.3e-142
Identity = 237/265 (89.43%), Postives = 255/265 (96.23%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAA+TMALSSPS AG+ +KLSP+AP++ G+ R+SMRKT +K V+S SPWYGPDRVKYLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+ DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CmaCh07G001280 vs. Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 1.1e-141
Identity = 240/267 (89.89%), Postives = 256/267 (95.88%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQ--VSSGSPWYGPDRVKYL 60
           MAASTMALSSPS AGK +KLSP++ ++ G+ +++MRKTASK   VSSGSPWYGPDRVKYL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR+AG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE+ DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSYATNFVPGK 266
           LENLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAYATNFVPGK 267

[Close]

BLAST of CmaCh07G001280 vs. Swiss-Prot
Match: CB2A_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 4.7e-140
Identity = 239/267 (89.51%), Postives = 251/267 (94.01%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQ--VSSGSPWYGPDRVKYL 60
           MA+STMALSSPSLAGK +KL P A ++ G  RI+MRKTA K   V S SPWYGPDRVKYL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 61  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 120
           GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 121 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRIAG
Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAG 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSYATNFVPGK 266
           LENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWNFATNFVPGK 267

[Close]

BLAST of CmaCh07G001280 vs. TrEMBL
Match: A0A0A0KKK7_CUCSA (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_6G522680 PE=3 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 1.1e-146
Identity = 251/265 (94.72%), Postives = 262/265 (98.87%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSP+LAG+ +KLSPNAP++QG+++ +MRKTASK VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CmaCh07G001280 vs. TrEMBL
Match: A0A0A0KI21_CUCSA (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_6G522690 PE=3 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 2.0e-145
Identity = 249/265 (93.96%), Postives = 260/265 (98.11%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAAS MALSSP+LAG+ +KLSP AP++QG+++ +MRKTASK VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASAMALSSPTLAGQAVKLSPTAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CmaCh07G001280 vs. TrEMBL
Match: B9S155_RICCO (Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis GN=RCOM_0633890 PE=3 SV=1)

HSP 1 Score: 519.6 bits (1337), Expect = 2.2e-144
Identity = 245/265 (92.45%), Postives = 258/265 (97.36%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MA STMALSSPS AGK +KLSP+AP++ G+ R+SMRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MATSTMALSSPSFAGKAVKLSPSAPELMGNGRVSMRKTAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRVAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CmaCh07G001280 vs. TrEMBL
Match: A0A067L0C5_JATCU (Chlorophyll a-b binding protein, chloroplastic OS=Jatropha curcas GN=JCGZ_04588 PE=3 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 4.9e-144
Identity = 244/265 (92.08%), Postives = 258/265 (97.36%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MA STMALSSPSLAGK +KL P+AP++ G+ R++MRKTASK VSSGSPWYGPDRVKYLGP
Sbjct: 1   MATSTMALSSPSLAGKAVKLGPSAPELMGNGRVTMRKTASKNVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRVAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CmaCh07G001280 vs. TrEMBL
Match: B9SF47_RICCO (Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis GN=RCOM_1214080 PE=3 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 3.2e-143
Identity = 244/265 (92.08%), Postives = 257/265 (96.98%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MA STMALSSPS AGK +KLSP+AP++ G+ R+SMRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MATSTMALSSPSFAGKAVKLSPSAPELMGNGRVSMRKTAAKNVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRVAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CmaCh07G001280 vs. TAIR10
Match: AT2G34430.1 (AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B1)

HSP 1 Score: 480.3 bits (1235), Expect = 7.5e-136
Identity = 233/266 (87.59%), Postives = 247/266 (92.86%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSP+L GK +KLSP A +V G+ RI+MRK +     SGSPWYG DRVKYLGP
Sbjct: 1   MAASTMALSSPALTGKAVKLSPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG-G 180
           NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG G
Sbjct: 121 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 180

Query: 181 PLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240
           PLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 181 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 240

Query: 241 ENLADHLADPVNNNAWSYATNFVPGK 266
           ENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 ENLADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of CmaCh07G001280 vs. TAIR10
Match: AT1G29930.1 (AT1G29930.1 chlorophyll A/B binding protein 1)

HSP 1 Score: 478.0 bits (1229), Expect = 3.7e-135
Identity = 233/267 (87.27%), Postives = 248/267 (92.88%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVS-SGSPWYGPDRVKYLG 60
           MAASTMALSSP+ AGK +KLSP A +V GS R++MRKT +K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSYATNFVPGK 266
           +ENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CmaCh07G001280 vs. TAIR10
Match: AT1G29920.1 (AT1G29920.1 chlorophyll A/B-binding protein 2)

HSP 1 Score: 476.1 bits (1224), Expect = 1.4e-134
Identity = 232/267 (86.89%), Postives = 247/267 (92.51%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVS-SGSPWYGPDRVKYLG 60
           MAASTMALSSP+ AGK + LSP A +V GS R++MRKT +K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSYATNFVPGK 266
           +ENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CmaCh07G001280 vs. TAIR10
Match: AT1G29910.1 (AT1G29910.1 chlorophyll A/B binding protein 3)

HSP 1 Score: 476.1 bits (1224), Expect = 1.4e-134
Identity = 232/267 (86.89%), Postives = 247/267 (92.51%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVS-SGSPWYGPDRVKYLG 60
           MAASTMALSSP+ AGK + LSP A +V GS R++MRKT +K    SGSPWYG DRVKYLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGE PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSYATNFVPGK 266
           +ENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of CmaCh07G001280 vs. TAIR10
Match: AT2G34420.1 (AT2G34420.1 photosystem II light harvesting complex gene B1B2)

HSP 1 Score: 474.2 bits (1219), Expect = 5.4e-134
Identity = 233/267 (87.27%), Postives = 247/267 (92.51%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVS-SGSPWYGPDRVKYLG 60
           MA+STMALSSP+ AGK +K  P A DV GS R++MRKT +K    SGSPWYG DRVKYLG
Sbjct: 1   MASSTMALSSPAFAGKAVK--PAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 120
           PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 61  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 121 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG- 180
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYR+AG 
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 180

Query: 181 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 181 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 240

Query: 241 LENLADHLADPVNNNAWSYATNFVPGK 266
           LENLADHLADPVNNNAW++ATNFVPGK
Sbjct: 241 LENLADHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of CmaCh07G001280 vs. NCBI nr
Match: gi|659078310|ref|XP_008439659.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo])

HSP 1 Score: 531.2 bits (1367), Expect = 1.1e-147
Identity = 254/265 (95.85%), Postives = 262/265 (98.87%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGK +KLSPNAP++QG+ RI+MRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 74  MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKSVSSGSPWYGPDRVKYLGP 133

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 134 FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 193

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 194 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 253

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 254 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 313

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 314 NLADHLADPVNNNAWAYATNFVPGK 338

[Close]

BLAST of CmaCh07G001280 vs. NCBI nr
Match: gi|659078308|ref|XP_008439658.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo])

HSP 1 Score: 529.6 bits (1363), Expect = 3.1e-147
Identity = 253/265 (95.47%), Postives = 262/265 (98.87%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSPSLAGK +KLSPNAP++QG+ RI+MRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPSLAGKAVKLSPNAPEIQGTGRITMRKTATKPVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHL+DPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLSDPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CmaCh07G001280 vs. NCBI nr
Match: gi|778721313|ref|XP_011658281.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic [Cucumis sativus])

HSP 1 Score: 527.3 bits (1357), Expect = 1.5e-146
Identity = 251/265 (94.72%), Postives = 262/265 (98.87%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAASTMALSSP+LAG+ +KLSPNAP++QG+++ +MRKTASK VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CmaCh07G001280 vs. NCBI nr
Match: gi|778721319|ref|XP_004134608.2| (PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 523.1 bits (1346), Expect = 2.9e-145
Identity = 249/265 (93.96%), Postives = 260/265 (98.11%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MAAS MALSSP+LAG+ +KLSP AP++QG+++ +MRKTASK VSSGSPWYGPDRVKYLGP
Sbjct: 1   MAASAMALSSPTLAGQAVKLSPTAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of CmaCh07G001280 vs. NCBI nr
Match: gi|255557387|ref|XP_002519724.1| (PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Ricinus communis])

HSP 1 Score: 519.6 bits (1337), Expect = 3.2e-144
Identity = 245/265 (92.45%), Postives = 258/265 (97.36%), Query Frame = 1


Query: 1   MAASTMALSSPSLAGKPIKLSPNAPDVQGSSRISMRKTASKQVSSGSPWYGPDRVKYLGP 60
           MA STMALSSPS AGK +KLSP+AP++ G+ R+SMRKTA+K VSSGSPWYGPDRVKYLGP
Sbjct: 1   MATSTMALSSPSFAGKAVKLSPSAPELMGNGRVSMRKTAAKSVSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+R
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRVAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWSYATNFVPGK 266
           NLADHLADPVNNNAW+YATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

The following BLAST results are available for this feature:

BLAST of CmaCh07G001280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CB21_CUCSA	3.2e-144	94.51	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
CB23_SOYBN	3.5e-143	92.80	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=...	[more]
CB22_TOBAC	2.3e-142	89.43	Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 ...	[more]
CB24_TOBAC	1.1e-141	89.89	Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 ...	[more]
CB2A_SPIOL	4.7e-140	89.51	Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea PE=1 SV=1	[more]

BLAST of CmaCh07G001280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKK7_CUCSA	1.1e-146	94.72	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_6G52268...	[more]
A0A0A0KI21_CUCSA	2.0e-145	93.96	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus GN=Csa_6G52269...	[more]
B9S155_RICCO	2.2e-144	92.45	Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis GN=RCOM_06338...	[more]
A0A067L0C5_JATCU	4.9e-144	92.08	Chlorophyll a-b binding protein, chloroplastic OS=Jatropha curcas GN=JCGZ_04588 ...	[more]
B9SF47_RICCO	3.2e-143	92.08	Chlorophyll a-b binding protein, chloroplastic OS=Ricinus communis GN=RCOM_12140...	[more]

BLAST of CmaCh07G001280 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G34430.1	7.5e-136	87.59	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT1G29930.1	3.7e-135	87.27	chlorophyll A/B binding protein 1	[more]
AT1G29920.1	1.4e-134	86.89	chlorophyll A/B-binding protein 2	[more]
AT1G29910.1	1.4e-134	86.89	chlorophyll A/B binding protein 3	[more]
AT2G34420.1	5.4e-134	87.27	photosystem II light harvesting complex gene B1B2	[more]

BLAST of CmaCh07G001280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659078310\|ref\|XP_008439659.1\|	1.1e-147	95.85	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo]	[more]
gi\|659078308\|ref\|XP_008439658.1\|	3.1e-147	95.47	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo]	[more]
gi\|778721313\|ref\|XP_011658281.1\|	1.5e-146	94.72	PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic [Cucum...	[more]
gi\|778721319\|ref\|XP_004134608.2\|	2.9e-145	93.96	PREDICTED: chlorophyll a-b binding protein of LHCII type I, chloroplastic-like [...	[more]
gi\|255557387\|ref\|XP_002519724.1\|	3.2e-144	92.45	PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001344	Chloro_AB-bd_pln
IPR022796	Chloroa_b-bind
IPR023329	Chlorophyll_a/b-bd_dom_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0009765	photosynthesis, light harvesting

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0018298	protein-chromophore linkage
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G001280.1	CmaCh07G001280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..265 score: 2.9E
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 65..231 score: 1.8
IPR023329	Chlorophyll a/b binding protein domain	GENE3D	G3DSA:1.10.3460.10		coord: 58..257 score: 1.2
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 48..262 score: 1.83
None	No IPR available	PANTHER	PTHR21649:SF26	CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED	coord: 1..265 score: 2.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh07G001280	Cucsa.047540	Cucumber (Gy14) v1	cgycmaB0048
CmaCh07G001280	Cla009752	Watermelon (97103) v1	cmawmB826
CmaCh07G001280	Csa6G522680	Cucumber (Chinese Long) v2	cmacuB877
CmaCh07G001280	MELO3C007153	Melon (DHL92) v3.5.1	cmameB798
CmaCh07G001280	ClCG01G024370	Watermelon (Charleston Gray)	cmawcgB754
CmaCh07G001280	CSPI06G36070	Wild cucumber (PI 183967)	cmacpiB893
CmaCh07G001280	CmoCh07G001290	Cucurbita moschata (Rifu)	cmacmoB875
CmaCh07G001280	CmoCh03G013760	Cucurbita moschata (Rifu)	cmacmoB861
CmaCh07G001280	Lsi01G001720	Bottle gourd (USVL1VR-Ls)	cmalsiB786
CmaCh07G001280	Cp4.1LG10g05840	Cucurbita pepo (Zucchini)	cmacpeB861
CmaCh07G001280	Cp4.1LG19g06040	Cucurbita pepo (Zucchini)	cmacpeB880
CmaCh07G001280	MELO3C032881.2	Melon (DHL92) v3.6.1	cmamedB897
CmaCh07G001280	CsaV3_6G051520	Cucumber (Chinese Long) v3	cmacucB1035
CmaCh07G001280	Cla97C01G024330	Watermelon (97103) v2	cmawmbB875
CmaCh07G001280	Bhi03G000048	Wax gourd	cmawgoB1069
CmaCh07G001280	CsGy6G035480	Cucumber (Gy14) v2	cgybcmaB861

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh07G001280	CmaCh03G013800	Cucurbita maxima (Rimu)	cmacmaB528

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh07G001280	Cucumber (Gy14) v2	cgybcmaB141
CmaCh07G001280	Melon (DHL92) v3.6.1	cmamedB883
CmaCh07G001280	Silver-seed gourd	carcmaB0766
CmaCh07G001280	Silver-seed gourd	carcmaB1112
CmaCh07G001280	Silver-seed gourd	carcmaB1312
CmaCh07G001280	Cucumber (Chinese Long) v3	cmacucB1003
CmaCh07G001280	Watermelon (97103) v2	cmawmbB887
CmaCh07G001280	Wax gourd	cmawgoB1080
CmaCh07G001280	Cucurbita maxima (Rimu)	cmacmaB238
CmaCh07G001280	Cucurbita maxima (Rimu)	cmacmaB414
CmaCh07G001280	Cucumber (Gy14) v1	cgycmaB0619
CmaCh07G001280	Cucurbita moschata (Rifu)	cmacmoB847
CmaCh07G001280	Cucurbita moschata (Rifu)	cmacmoB850
CmaCh07G001280	Wild cucumber (PI 183967)	cmacpiB864
CmaCh07G001280	Cucumber (Chinese Long) v2	cmacuB847
CmaCh07G001280	Melon (DHL92) v3.5.1	cmameB782
CmaCh07G001280	Watermelon (Charleston Gray)	cmawcgB759
CmaCh07G001280	Watermelon (97103) v1	cmawmB819
CmaCh07G001280	Cucurbita pepo (Zucchini)	cmacpeB858
CmaCh07G001280	Cucurbita pepo (Zucchini)	cmacpeB881
CmaCh07G001280	Bottle gourd (USVL1VR-Ls)	cmalsiB796