CmaCh06G015380 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G015380
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Pectinesterase
Location	Cma_Chr06 : 9657268 .. 9657612 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCGCTAATGGACTTGTGATGGTGGGTGAGGTTACATCTCTTGTGAGCTCTTTGTGGAAGGCGCTCGGGCTGCCAGAAACAGGGCGACAACTCCGAGCAAAAGAGCTCGATGAAGAAGATGAAGAGGAAGAGCCATCTTGGGTCAATGACAGGCGAGGGCTACTCCAAGCCACTGGTGCCAAGATTAGGGCAAATGTGGTGGTGGCTAAAGACGGAAGTGGAAAGTACAAGACAATAACTCAAGCCCTTCAAGATGTCCCAAGGAAGAGCAATAAAAGACGGAAGTGGAAAGTACAAGACAATAACTCAAGCCCTTCAAGATGTCCCAAGGAAGAGCAATAA

mRNA sequence

ATGACCGCTAATGGACTTGTGATGGTGGGTGAGGTTACATCTCTTGTGAGCTCTTTGTGGAAGGCGCTCGGGCTGCCAGAAACAGGGCGACAACTCCGAGCAAAAGAGCTCGATGAAGAAGATGAAGAGGAAGAGCCATCTTGGGTCAATGACAGGCGAGGGCTACTCCAAGCCACTGGTGCCAAGATTAGGGCAAATGTGGTGGTGGCTAAAGACGGAAGTGGAAAGTACAAGACAATAACTCAAGCCCTTCAAGATGTCCCAAGGAAGAGCAATAAAAGACGGAAGTGGAAAGTACAAGACAATAACTCAAGCCCTTCAAGATGTCCCAAGGAAGAGCAATAA

Coding sequence (CDS)

ATGACCGCTAATGGACTTGTGATGGTGGGTGAGGTTACATCTCTTGTGAGCTCTTTGTGGAAGGCGCTCGGGCTGCCAGAAACAGGGCGACAACTCCGAGCAAAAGAGCTCGATGAAGAAGATGAAGAGGAAGAGCCATCTTGGGTCAATGACAGGCGAGGGCTACTCCAAGCCACTGGTGCCAAGATTAGGGCAAATGTGGTGGTGGCTAAAGACGGAAGTGGAAAGTACAAGACAATAACTCAAGCCCTTCAAGATGTCCCAAGGAAGAGCAATAAAAGACGGAAGTGGAAAGTACAAGACAATAACTCAAGCCCTTCAAGATGTCCCAAGGAAGAGCAATAA

Protein sequence

MTANGLVMVGEVTSLVSSLWKALGLPETGRQLRAKELDEEDEEEEPSWVNDRRGLLQATGAKIRANVVVAKDGSGKYKTITQALQDVPRKSNKRRKWKVQDNNSSPSRCPKEEQ

Homology

[Close]

BLAST of CmaCh06G015380 vs. Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.4e-08
Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLPETGRQLRAKELDEEDEEEEPSWVNDRRGLLQATG 60
           +T+NGL M+  +++L+          + G+  R K L  ED    PSWV      L AT 
Sbjct: 197 LTSNGLAMITNISNLLGEFNVTGVTGDLGKYAR-KLLSAEDGI--PSWVGPNTRRLMATK 256

Query: 61  AKIRANVVVAKDGSGKYKTITQALQDVPRKSNK 94
             ++ANVVVA DGSG+YKTI +AL  VP+ + K
Sbjct: 257 GGVKANVVVAHDGSGQYKTINEALNAVPKANQK 286

[Close]

BLAST of CmaCh06G015380 vs. Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 9.2e-08
Identity = 37/94 (39.36%), Postives = 59/94 (62.77%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLPE-TGRQLRAKELDEEDEEEEPSWVNDR-RGLLQA 60
           +T NGL MV E+++ +  +     +PE   R+L ++E         PSW++ R R LL A
Sbjct: 197 LTHNGLAMVTEMSNYLGQMQ----IPEMNSRRLLSQEF--------PSWMDARARRLLNA 256

Query: 61  TGAKIRANVVVAKDGSGKYKTITQALQDVPRKSN 93
             ++++ ++VVA+DGSG+YKTI +AL  VP+K N
Sbjct: 257 PMSEVKPDIVVAQDGSGQYKTINEALNFVPKKKN 278

[Close]

BLAST of CmaCh06G015380 vs. Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07
Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLPETGRQLRAKELDEEDEEEEPSWVNDR-RGLLQAT 60
           +T NGL ++ E+++ V  + +  GL    R+L A        E  PSWV+ R R LLQA 
Sbjct: 198 LTHNGLAIISEMSNFVGQM-QIPGL--NSRRLLA--------EGFPSWVDQRGRKLLQAA 257

Query: 61  GA--KIRANVVVAKDGSGKYKTITQALQDVPRKSN 93
            A   ++ ++VVA+DGSG+YKTI +ALQ VP+K N
Sbjct: 258 AAYSDVKPDIVVAQDGSGQYKTINEALQFVPKKRN 281

[Close]

BLAST of CmaCh06G015380 vs. Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.8e-07
Identity = 38/84 (45.24%), Postives = 51/84 (60.71%), Query Frame = 1


Query: 11  EVTSLVSSLWKALGLPETGRQLRAKELDEEDEEEEPSWVNDRRGLLQATGAKIRANVVVA 70
           E+TS   ++   LG      +LR + L   D E +    +  R LLQ+T  +  A++VVA
Sbjct: 203 ELTSNALAIITWLGKIADSFKLRRRLLTTADVEVD---FHAGRRLLQSTDLRKVADIVVA 262

Query: 71  KDGSGKYKTITQALQDVPRKSNKR 95
           KDGSGKY+TI +ALQDVP KS KR
Sbjct: 263 KDGSGKYRTIKRALQDVPEKSEKR 283

[Close]

BLAST of CmaCh06G015380 vs. Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.9e-06
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 1


Query: 46  PSWVNDR-RGLLQATGAKIRANVVVAKDGSGKYKTITQALQDVPRKSNKR 95
           PSWV+ R R L++++G  I AN VVAKDG+GKY+T+ +A+   P KS  R
Sbjct: 216 PSWVSSRDRKLMESSGKDIGANAVVAKDGTGKYRTLAEAVAAAPDKSKTR 265

[Close]

BLAST of CmaCh06G015380 vs. TrEMBL
Match: A0A0A0L930_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_3G164510 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.3e-21
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLPETGRQLRAKELDEEDEEEEPSWVNDRRGLLQATG 60
           +T NGL MV EVTS+++S     GLP  GR+L  +E +E  + EEPSWV DRRGLLQATG
Sbjct: 198 LTINGLGMVSEVTSILTSF----GLPAIGRRLMTEESNE--QREEPSWVRDRRGLLQATG 257

Query: 61  AKIRANVVVAKDGSGKYKTITQALQDVPRKSNK 94
           A I+A+ VVAKDGSGKYKT+T AL DVP+KSNK
Sbjct: 258 ANIKADAVVAKDGSGKYKTVTAALNDVPKKSNK 284

[Close]

BLAST of CmaCh06G015380 vs. TrEMBL
Match: W9S1C5_9ROSA (Pectinesterase OS=Morus notabilis GN=L484_007196 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 5.6e-12
Identity = 46/95 (48.42%), Postives = 69/95 (72.63%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLP-ETGRQLRAKELDEEDEEEEPSWVND-RRGLLQA 60
           +T+NGL MV E++S+++S      LP    R+L + E   + ++ E SW++D +R LLQA
Sbjct: 204 LTSNGLAMVTEISSILASY----NLPFNVSRRLLSSE---DGDDTELSWLSDGKRRLLQA 263

Query: 61  TGAKIRANVVVAKDGSGKYKTITQALQDVPRKSNK 94
           TG  I+A+VVVAKDGSGKY+T+ +AL+D+P+K NK
Sbjct: 264 TGKTIKADVVVAKDGSGKYRTVNEALKDIPKKGNK 291

[Close]

BLAST of CmaCh06G015380 vs. TrEMBL
Match: A0A0A0KD24_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_6G318700 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-10
Identity = 46/94 (48.94%), Postives = 64/94 (68.09%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLPETGRQLRAKELDEEDEEEEPSWVND-RRGLLQAT 60
           MT NGL +V E+++++ SL     LP     +  + L E+D+ E PSWV+D +R L+QA 
Sbjct: 207 MTTNGLGIVNELSTILGSLQ----LPG----MSGRRLLEDDDREMPSWVSDGKRRLMQAG 266

Query: 61  GAKIRANVVVAKDGSGKYKTITQALQDVPRKSNK 94
            A ++ ++VVA+DGSGKYKTI  AL DVP KSNK
Sbjct: 267 AAAMKPDLVVAQDGSGKYKTINAALADVPLKSNK 292

[Close]

BLAST of CmaCh06G015380 vs. TrEMBL
Match: M0ZL18_SOLTU (Pectinesterase OS=Solanum tuberosum GN=PGSC0003DMG400001193 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-08
Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 1


Query: 2   TANGLVMVGEVTSLVSSLWKALGLPETGRQLRAKELDEEDEEEEPSWV---NDRRGLLQA 61
           T+N L ++  + + ++SL         G++ R     ++D++E PSW+   NDR+ L ++
Sbjct: 214 TSNSLALISSLENSITSLGAI------GKRRRLMGYGDDDDDEYPSWLSSSNDRKLLQKS 273

Query: 62  TGAKIRANVVVAKDGSGKYKTITQALQDVPRKSNKR 95
           +  KI+ NVVVAKDGSGKYK+I  AL+  P KS KR
Sbjct: 274 SETKIKVNVVVAKDGSGKYKSIKAALKAAPEKSKKR 303

[Close]

BLAST of CmaCh06G015380 vs. TrEMBL
Match: B9HXR2_POPTR (Pectinesterase OS=Populus trichocarpa GN=POPTR_0010s01380g PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.7e-08
Identity = 43/96 (44.79%), Postives = 63/96 (65.62%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLPE-TGRQLRAKELDEEDEEEEPSWVND--RRGLLQ 60
           +T+NGL MV  VTS++    K L +P  T R+L       E ++E PSWVN   R  LL+
Sbjct: 200 LTSNGLAMVDGVTSIL----KDLNIPGLTSRRLL------EADDEFPSWVNGGKRMLLLK 259

Query: 61  ATGAKIRANVVVAKDGSGKYKTITQALQDVPRKSNK 94
            T A I+A+ +VA+DGSG+YKTI +A++ +P+K N+
Sbjct: 260 ETPATIKADAIVAQDGSGQYKTIAEAIEKIPKKKNE 285

[Close]

BLAST of CmaCh06G015380 vs. TAIR10
Match: AT5G49180.1 (AT5G49180.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 58.5 bits (140), Expect = 3.0e-09
Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLPETGRQLRAKELDEEDEEEEPSWVNDRRGLLQATG 60
           +T+NGL M+  +++L+          + G+  R K L  ED    PSWV      L AT 
Sbjct: 197 LTSNGLAMITNISNLLGEFNVTGVTGDLGKYAR-KLLSAEDGI--PSWVGPNTRRLMATK 256

Query: 61  AKIRANVVVAKDGSGKYKTITQALQDVPRKSNK 94
             ++ANVVVA DGSG+YKTI +AL  VP+ + K
Sbjct: 257 GGVKANVVVAHDGSGQYKTINEALNAVPKANQK 286

[Close]

BLAST of CmaCh06G015380 vs. TAIR10
Match: AT5G27870.1 (AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 57.8 bits (138), Expect = 5.2e-09
Identity = 37/94 (39.36%), Postives = 59/94 (62.77%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLPE-TGRQLRAKELDEEDEEEEPSWVNDR-RGLLQA 60
           +T NGL MV E+++ +  +     +PE   R+L ++E         PSW++ R R LL A
Sbjct: 197 LTHNGLAMVTEMSNYLGQMQ----IPEMNSRRLLSQEF--------PSWMDARARRLLNA 256

Query: 61  TGAKIRANVVVAKDGSGKYKTITQALQDVPRKSN 93
             ++++ ++VVA+DGSG+YKTI +AL  VP+K N
Sbjct: 257 PMSEVKPDIVVAQDGSGQYKTINEALNFVPKKKN 278

[Close]

BLAST of CmaCh06G015380 vs. TAIR10
Match: AT3G05610.1 (AT3G05610.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 57.4 bits (137), Expect = 6.7e-09
Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLPETGRQLRAKELDEEDEEEEPSWVNDR-RGLLQAT 60
           +T NGL ++ E+++ V  + +  GL    R+L A        E  PSWV+ R R LLQA 
Sbjct: 198 LTHNGLAIISEMSNFVGQM-QIPGL--NSRRLLA--------EGFPSWVDQRGRKLLQAA 257

Query: 61  GA--KIRANVVVAKDGSGKYKTITQALQDVPRKSN 93
            A   ++ ++VVA+DGSG+YKTI +ALQ VP+K N
Sbjct: 258 AAYSDVKPDIVVAQDGSGQYKTINEALQFVPKKRN 281

[Close]

BLAST of CmaCh06G015380 vs. TAIR10
Match: AT3G10710.1 (AT3G10710.1 root hair specific 12)

HSP 1 Score: 54.7 bits (130), Expect = 4.4e-08
Identity = 38/84 (45.24%), Postives = 51/84 (60.71%), Query Frame = 1


Query: 11  EVTSLVSSLWKALGLPETGRQLRAKELDEEDEEEEPSWVNDRRGLLQATGAKIRANVVVA 70
           E+TS   ++   LG      +LR + L   D E +    +  R LLQ+T  +  A++VVA
Sbjct: 203 ELTSNALAIITWLGKIADSFKLRRRLLTTADVEVD---FHAGRRLLQSTDLRKVADIVVA 262

Query: 71  KDGSGKYKTITQALQDVPRKSNKR 95
           KDGSGKY+TI +ALQDVP KS KR
Sbjct: 263 KDGSGKYRTIKRALQDVPEKSEKR 283

[Close]

BLAST of CmaCh06G015380 vs. TAIR10
Match: AT3G06830.1 (AT3G06830.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 47.8 bits (112), Expect = 5.3e-06
Identity = 37/97 (38.14%), Postives = 55/97 (56.70%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLPETGRQLRAKELDEEDEEEEPSWVN-DRRGLLQAT 60
           +++N L MV  +++L+ +     GL     +   K L  ED    P+WV  + R L+ A 
Sbjct: 191 LSSNSLAMVTRISTLIPNS-NLTGLTGALAKYARKLLSTEDSI--PTWVGPEARRLMAAQ 250

Query: 61  GA---KIRANVVVAKDGSGKYKTITQALQDVPRKSNK 94
           G     ++AN VVA+DG+G++KTIT AL  VP K NK
Sbjct: 251 GGGPGPVKANAVVAQDGTGQFKTITDALNAVP-KGNK 283

[Close]

BLAST of CmaCh06G015380 vs. NCBI nr
Match: gi|659076869|ref|XP_008438906.1| (PREDICTED: pectinesterase-like [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 1.1e-21
Identity = 59/93 (63.44%), Postives = 75/93 (80.65%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLPETGRQLRAKELDEEDEEEEPSWVNDRRGLLQATG 60
           +T+NGL MV EV S+++S     GLP  GR+L  +E +++  EEEPSWV DRRGLLQATG
Sbjct: 198 LTSNGLDMVSEVNSIMTSF----GLPAVGRRLLTEESNQQ--EEEPSWVGDRRGLLQATG 257

Query: 61  AKIRANVVVAKDGSGKYKTITQALQDVPRKSNK 94
           A ++A+VVVAKDGSGKYKT+T+AL DVP+KSNK
Sbjct: 258 ATVKADVVVAKDGSGKYKTVTEALNDVPKKSNK 284

[Close]

BLAST of CmaCh06G015380 vs. NCBI nr
Match: gi|778678954|ref|XP_004134493.2| (PREDICTED: pectinesterase-like [Cucumis sativus])

HSP 1 Score: 109.8 bits (273), Expect = 3.2e-21
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLPETGRQLRAKELDEEDEEEEPSWVNDRRGLLQATG 60
           +T NGL MV EVTS+++S     GLP  GR+L  +E +E  + EEPSWV DRRGLLQATG
Sbjct: 198 LTINGLGMVSEVTSILTSF----GLPAIGRRLMTEESNE--QREEPSWVRDRRGLLQATG 257

Query: 61  AKIRANVVVAKDGSGKYKTITQALQDVPRKSNK 94
           A I+A+ VVAKDGSGKYKT+T AL DVP+KSNK
Sbjct: 258 ANIKADAVVAKDGSGKYKTVTAALNDVPKKSNK 284

[Close]

BLAST of CmaCh06G015380 vs. NCBI nr
Match: gi|703132462|ref|XP_010105131.1| (Putative pectinesterase/pectinesterase inhibitor 28 [Morus notabilis])

HSP 1 Score: 78.6 bits (192), Expect = 8.0e-12
Identity = 46/95 (48.42%), Postives = 69/95 (72.63%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLP-ETGRQLRAKELDEEDEEEEPSWVND-RRGLLQA 60
           +T+NGL MV E++S+++S      LP    R+L + E   + ++ E SW++D +R LLQA
Sbjct: 204 LTSNGLAMVTEISSILASY----NLPFNVSRRLLSSE---DGDDTELSWLSDGKRRLLQA 263

Query: 61  TGAKIRANVVVAKDGSGKYKTITQALQDVPRKSNK 94
           TG  I+A+VVVAKDGSGKY+T+ +AL+D+P+K NK
Sbjct: 264 TGKTIKADVVVAKDGSGKYRTVNEALKDIPKKGNK 291

[Close]

BLAST of CmaCh06G015380 vs. NCBI nr
Match: gi|702264392|ref|XP_010039612.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 21 [Eucalyptus grandis])

HSP 1 Score: 77.0 bits (188), Expect = 2.3e-11
Identity = 47/94 (50.00%), Postives = 65/94 (69.15%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLPETGRQLRAKELDEEDEEEEPSWVND-RRGLLQAT 60
           +T+NGL MV E++SL+ SL     +P+  R+L  +E D     E PSWV++ RR LL A 
Sbjct: 205 LTSNGLAMVTEISSLLGSL----NIPDVSRRLLTEEQD--GIPEFPSWVDEGRRKLLAAA 264

Query: 61  GAKIRANVVVAKDGSGKYKTITQALQDVPRKSNK 94
              I+ +VVVA+DGSGKYKTI +AL +VP+K+NK
Sbjct: 265 PKDIKPDVVVAQDGSGKYKTIREALNEVPKKNNK 292

[Close]

BLAST of CmaCh06G015380 vs. NCBI nr
Match: gi|1009163283|ref|XP_015899883.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 21 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 75.5 bits (184), Expect = 6.8e-11
Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 1


Query: 1   MTANGLVMVGEVTSLVSSLWKALGLPETGRQLRAKELDEEDEEEEPSWVND-RRGLLQAT 60
           +T+NGL MV E+ ++++S       P T      + L+EE   E PSWVND +R LL A+
Sbjct: 199 LTSNGLAMVTEIYNVLNSNLNLPNAPSTPNPPHRRLLNEE---ETPSWVNDGKRKLLAAS 258

Query: 61  GAKIRANVVVAKDGSGKYKTITQALQDVPRKSN 93
            A ++ +VVVAKDGSGKYKT+ +AL+D+P+  N
Sbjct: 259 PADLKPDVVVAKDGSGKYKTVNEALKDIPKYGN 288

The following BLAST results are available for this feature:

BLAST of CmaCh06G015380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PME58_ARATH	5.4e-08	40.86	Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=P...	[more]
PME28_ARATH	9.2e-08	39.36	Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=P...	[more]
PME21_ARATH	1.2e-07	43.16	Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=P...	[more]
PME24_ARATH	7.8e-07	45.24	Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=P...	[more]
PME22_SOLLC	3.9e-06	52.00	Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1	[more]

BLAST of CmaCh06G015380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L930_CUCSA	2.3e-21	64.52	Pectinesterase OS=Cucumis sativus GN=Csa_3G164510 PE=4 SV=1	[more]
W9S1C5_9ROSA	5.6e-12	48.42	Pectinesterase OS=Morus notabilis GN=L484_007196 PE=4 SV=1	[more]
A0A0A0KD24_CUCSA	1.1e-10	48.94	Pectinesterase OS=Cucumis sativus GN=Csa_6G318700 PE=4 SV=1	[more]
M0ZL18_SOLTU	1.7e-08	40.63	Pectinesterase OS=Solanum tuberosum GN=PGSC0003DMG400001193 PE=4 SV=1	[more]
B9HXR2_POPTR	3.7e-08	44.79	Pectinesterase OS=Populus trichocarpa GN=POPTR_0010s01380g PE=4 SV=1	[more]

BLAST of CmaCh06G015380 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49180.1	3.0e-09	40.86	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT5G27870.1	5.2e-09	39.36	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT3G05610.1	6.7e-09	43.16	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT3G10710.1	4.4e-08	45.24	root hair specific 12	[more]
AT3G06830.1	5.3e-06	38.14	Plant invertase/pectin methylesterase inhibitor superfamily	[more]

BLAST of CmaCh06G015380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076869\|ref\|XP_008438906.1\|	1.1e-21	63.44	PREDICTED: pectinesterase-like [Cucumis melo]	[more]
gi\|778678954\|ref\|XP_004134493.2\|	3.2e-21	64.52	PREDICTED: pectinesterase-like [Cucumis sativus]	[more]
gi\|703132462\|ref\|XP_010105131.1\|	8.0e-12	48.42	Putative pectinesterase/pectinesterase inhibitor 28 [Morus notabilis]	[more]
gi\|702264392\|ref\|XP_010039612.1\|	2.3e-11	50.00	PREDICTED: probable pectinesterase/pectinesterase inhibitor 21 [Eucalyptus grand...	[more]
gi\|1009163283\|ref\|XP_015899883.1\|	6.8e-11	46.24	PREDICTED: probable pectinesterase/pectinesterase inhibitor 21 isoform X1 [Zizip...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000070	Pectinesterase_cat
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005618	cell wall
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G015380.1	CmaCh06G015380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 66..99 score: 3.
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 63..94 score: 8.6
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 63..94 score: 1.
None	No IPR available	PANTHER	PTHR31707	FAMILY NOT NAMED	coord: 1..93 score: 2.0
None	No IPR available	PANTHER	PTHR31707:SF17	SUBFAMILY NOT NAMED	coord: 1..93 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh06G015380	Wax gourd	cmawgoB1002
CmaCh06G015380	Wax gourd	cmawgoB1006
CmaCh06G015380	Cucurbita maxima (Rimu)	cmacmaB284
CmaCh06G015380	Cucurbita maxima (Rimu)	cmacmaB369
CmaCh06G015380	Cucurbita maxima (Rimu)	cmacmaB554
CmaCh06G015380	Cucumber (Gy14) v1	cgycmaB0112
CmaCh06G015380	Cucumber (Gy14) v1	cgycmaB0727
CmaCh06G015380	Cucurbita moschata (Rifu)	cmacmoB797
CmaCh06G015380	Cucurbita moschata (Rifu)	cmacmoB829
CmaCh06G015380	Wild cucumber (PI 183967)	cmacpiB826
CmaCh06G015380	Wild cucumber (PI 183967)	cmacpiB862
CmaCh06G015380	Cucumber (Chinese Long) v2	cmacuB814
CmaCh06G015380	Cucumber (Chinese Long) v2	cmacuB845
CmaCh06G015380	Melon (DHL92) v3.5.1	cmameB747
CmaCh06G015380	Melon (DHL92) v3.5.1	cmameB763
CmaCh06G015380	Watermelon (Charleston Gray)	cmawcgB737
CmaCh06G015380	Watermelon (Charleston Gray)	cmawcgB745
CmaCh06G015380	Watermelon (97103) v1	cmawmB798
CmaCh06G015380	Watermelon (97103) v1	cmawmB811
CmaCh06G015380	Cucurbita pepo (Zucchini)	cmacpeB837
CmaCh06G015380	Cucurbita pepo (Zucchini)	cmacpeB853
CmaCh06G015380	Bottle gourd (USVL1VR-Ls)	cmalsiB741
CmaCh06G015380	Bottle gourd (USVL1VR-Ls)	cmalsiB757
CmaCh06G015380	Cucumber (Gy14) v2	cgybcmaB427
CmaCh06G015380	Cucumber (Gy14) v2	cgybcmaB858
CmaCh06G015380	Melon (DHL92) v3.6.1	cmamedB846
CmaCh06G015380	Melon (DHL92) v3.6.1	cmamedB863
CmaCh06G015380	Silver-seed gourd	carcmaB0393
CmaCh06G015380	Cucumber (Chinese Long) v3	cmacucB0965
CmaCh06G015380	Cucumber (Chinese Long) v3	cmacucB1001
CmaCh06G015380	Watermelon (97103) v2	cmawmbB856
CmaCh06G015380	Watermelon (97103) v2	cmawmbB865