CmaCh06G015360 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G015360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Pectinesterase
Location	Cma_Chr06 : 9656130 .. 9656410 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGGCGATTTTGCTCTCAAGACTTTGTTTTACACAGAATTTGATAACAGAGGACCTGGTTCCATGGGAGGGCGATTTTGCTCTCAAGACTTTGTTTTACACAGAATTTGATAACAGAGGACCTGGTGCAGCAAAACAAAATAGAGTTAAGTGGAGGGGAATTAAACAAATCACACCAAAGCATGCCATTGATTTCACCCCTGGGTTGTTTATTCGTGGTAATCCCTGGATTAGGCGCACTGGAGTTCCTTACTATTCGGGCATGGCAACGATCTAA

mRNA sequence

ATGGGAGGGCGATTTTGCTCTCAAGACTTTAATTTGATAACAGAGGACCTGGTTCCATGGGAGGGCGATTTTGCTCTCAAGACTTTGTTTTACACAGAATTTGATAACAGAGGACCTGGTGCAGCAAAACAAAATAGAGTTAAGTGGAGGGGAATTAAACAAATCACACCAAAGCATGCCATTGATTTCACCCCTGGGTTGTTTATTCGTGGTAATCCCTGGATTAGGCGCACTGGAGTTCCTTACTATTCGGGCATGGCAACGATCTAA

Coding sequence (CDS)

ATGGGAGGGCGATTTTGCTCTCAAGACTTTAATTTGATAACAGAGGACCTGGTTCCATGGGAGGGCGATTTTGCTCTCAAGACTTTGTTTTACACAGAATTTGATAACAGAGGACCTGGTGCAGCAAAACAAAATAGAGTTAAGTGGAGGGGAATTAAACAAATCACACCAAAGCATGCCATTGATTTCACCCCTGGGTTGTTTATTCGTGGTAATCCCTGGATTAGGCGCACTGGAGTTCCTTACTATTCGGGCATGGCAACGATCTAA

Protein sequence

MGGRFCSQDFNLITEDLVPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPWIRRTGVPYYSGMATI

Homology

[Close]

BLAST of CmaCh06G015360 vs. Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-18
Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 1


Query: 18  VPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPWIRR 77
           +PW GDFAL TL+Y E++N GPG+ +  RVKW GIK+++PK A+ FTP  F+RGN WI  
Sbjct: 502 LPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKLSPKQALRFTPARFLRGNLWIPP 561

Query: 78  TGVPY 83
             VPY
Sbjct: 562 NRVPY 566

[Close]

BLAST of CmaCh06G015360 vs. Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 8.4e-17
Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 1


Query: 19  PWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPWIRRT 78
           PW GDF LKTLFY+E  N GPG+A  NRV W GIK ++ +  + FTP  +I+G+ WI   
Sbjct: 498 PWLGDFGLKTLFYSEVQNTGPGSALANRVTWAGIKTLSEEDILKFTPAQYIQGDDWIPGK 557

Query: 79  GVPYYSGM 87
           GVPY +G+
Sbjct: 558 GVPYTTGL 565

[Close]

BLAST of CmaCh06G015360 vs. Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-16
Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 1


Query: 18  VPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPWIRR 77
           +PW GDFALKTL+Y E  N GPG+ +  RVKW GIK++TP+ A+ +T   F+RG+ WI +
Sbjct: 500 LPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLTPQDALLYTGDRFLRGDTWIPQ 559

Query: 78  TGVPY 83
           T VPY
Sbjct: 560 TQVPY 564

[Close]

BLAST of CmaCh06G015360 vs. Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-16
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 1


Query: 15  EDLVPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPW 74
           E  + W   FAL TLFYTE+ NRG G+ +  RV+WRGIK+I+ + A +F PG F+RGN W
Sbjct: 631 EGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRISDRAAREFAPGNFLRGNTW 690

Query: 75  IRRTGVPY 83
           I +T +PY
Sbjct: 691 IPQTRIPY 698

[Close]

BLAST of CmaCh06G015360 vs. Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.1e-15
Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 1


Query: 20  WEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQIT-PKHAIDFTPGLFIRGNPWIRRT 79
           W GDFAL TL+Y E+ N GPG++  NRVKWRG   +T P     FT G FI GN W+  T
Sbjct: 443 WSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPAT 502

Query: 80  GVPYYSGM 87
            VP+ SG+
Sbjct: 503 NVPFTSGL 510

[Close]

BLAST of CmaCh06G015360 vs. TrEMBL
Match: A0A0A0L930_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_3G164510 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 9.4e-23
Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = 1


Query: 15  EDLVPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPW 74
           E  +PW G+FAL TLFY E +NRGPGAA   RVKW+GIK+IT +HA+DFT   FIRG+PW
Sbjct: 496 EGWLPWTGNFALNTLFYAEINNRGPGAATDKRVKWKGIKKITMEHALDFTAARFIRGDPW 555

Query: 75  IRRTGVPYYSGMATI 90
           I+ TGVPY SGM  +
Sbjct: 556 IKPTGVPYTSGMMAV 570

[Close]

BLAST of CmaCh06G015360 vs. TrEMBL
Match: A0A0A0LYF5_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_1G569220 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-22
Identity = 45/72 (62.50%), Postives = 58/72 (80.56%), Query Frame = 1


Query: 15  EDLVPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPW 74
           E  +PW GD+ L+T FYTE++N GPG+ K  RVKWRGIK ITP+HA+DFTPG F++G+ W
Sbjct: 501 EGWLPWAGDWGLRTCFYTEYNNYGPGSDKSKRVKWRGIKNITPQHAVDFTPGRFLKGDRW 560

Query: 75  IRRTGVPYYSGM 87
           I+ TGVPY SG+
Sbjct: 561 IKPTGVPYVSGL 572

[Close]

BLAST of CmaCh06G015360 vs. TrEMBL
Match: D7U9X3_VITVI (Pectinesterase OS=Vitis vinifera GN=VIT_14s0060g01950 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-22
Identity = 48/72 (66.67%), Postives = 55/72 (76.39%), Query Frame = 1


Query: 18  VPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPWIRR 77
           +PW GDFAL+T FYTEF NRGPGA   +RVKWRGIK I P HAIDF PG F+ G+ WI  
Sbjct: 506 LPWAGDFALRTCFYTEFRNRGPGAKTHDRVKWRGIKTIKPSHAIDFAPGRFLSGDRWIPS 565

Query: 78  TGVPYYSGMATI 90
           TGVPY SG+ T+
Sbjct: 566 TGVPYNSGLFTL 577

[Close]

BLAST of CmaCh06G015360 vs. TrEMBL
Match: W9S2R1_9ROSA (Pectinesterase OS=Morus notabilis GN=L484_001919 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-21
Identity = 45/73 (61.64%), Postives = 57/73 (78.08%), Query Frame = 1


Query: 18  VPWEGDFALKTLFYTEFDNRGPGAAKQNR-VKWRGIKQITPKHAIDFTPGLFIRGNPWIR 77
           +PW GDF L+T FYTEF NRGPGA + +R  KW+G+K IT KHA DFTPG F +G+ WI+
Sbjct: 509 LPWAGDFGLRTCFYTEFGNRGPGAVEPSRRAKWKGVKNITAKHARDFTPGSFFKGDWWIK 568

Query: 78  RTGVPYYSGMATI 90
           RTG+PY SGM ++
Sbjct: 569 RTGIPYVSGMFSV 581

[Close]

BLAST of CmaCh06G015360 vs. TrEMBL
Match: W9S1C5_9ROSA (Pectinesterase OS=Morus notabilis GN=L484_007196 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.7e-20
Identity = 43/75 (57.33%), Postives = 54/75 (72.00%), Query Frame = 1


Query: 15  EDLVPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPW 74
           E  +PW GDFAL T FYTE  NRGPG+    RVKWRGIK++  + A+++TPG FIRG+ W
Sbjct: 503 EGWLPWAGDFALNTCFYTEILNRGPGSKLDGRVKWRGIKKVPAQRAVEYTPGRFIRGDWW 562

Query: 75  IRRTGVPYYSGMATI 90
           I+  GVPY SGM  +
Sbjct: 563 IKAAGVPYVSGMLNV 577

[Close]

BLAST of CmaCh06G015360 vs. TAIR10
Match: AT5G49180.1 (AT5G49180.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 93.2 bits (230), Expect = 8.7e-20
Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 1


Query: 18  VPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPWIRR 77
           +PW GDFAL TL+Y E++N GPG+ +  RVKW GIK+++PK A+ FTP  F+RGN WI  
Sbjct: 502 LPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKLSPKQALRFTPARFLRGNLWIPP 561

Query: 78  TGVPY 83
             VPY
Sbjct: 562 NRVPY 566

[Close]

BLAST of CmaCh06G015360 vs. TAIR10
Match: AT3G05610.1 (AT3G05610.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 87.4 bits (215), Expect = 4.8e-18
Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 1


Query: 19  PWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPWIRRT 78
           PW GDF LKTLFY+E  N GPG+A  NRV W GIK ++ +  + FTP  +I+G+ WI   
Sbjct: 498 PWLGDFGLKTLFYSEVQNTGPGSALANRVTWAGIKTLSEEDILKFTPAQYIQGDDWIPGK 557

Query: 79  GVPYYSGM 87
           GVPY +G+
Sbjct: 558 GVPYTTGL 565

[Close]

BLAST of CmaCh06G015360 vs. TAIR10
Match: AT3G06830.1 (AT3G06830.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 87.0 bits (214), Expect = 6.2e-18
Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 1


Query: 18  VPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPWIRR 77
           +PW GDFALKTL+Y E  N GPG+ +  RVKW GIK++TP+ A+ +T   F+RG+ WI +
Sbjct: 500 LPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLTPQDALLYTGDRFLRGDTWIPQ 559

Query: 78  TGVPY 83
           T VPY
Sbjct: 560 TQVPY 564

[Close]

BLAST of CmaCh06G015360 vs. TAIR10
Match: AT4G15980.1 (AT4G15980.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 86.3 bits (212), Expect = 1.1e-17
Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 1


Query: 15  EDLVPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPW 74
           E  + W   FAL TLFYTE+ NRG G+ +  RV+WRGIK+I+ + A +F PG F+RGN W
Sbjct: 631 EGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRISDRAAREFAPGNFLRGNTW 690

Query: 75  IRRTGVPY 83
           I +T +PY
Sbjct: 691 IPQTRIPY 698

[Close]

BLAST of CmaCh06G015360 vs. TAIR10
Match: AT5G27870.1 (AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 82.4 bits (202), Expect = 1.5e-16
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 1


Query: 19  PWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPWIRRT 78
           PW G+F L TLFY+E  N GPGAA   RV W GIK+++ +  + FTP  +I+G+ WI   
Sbjct: 495 PWLGEFGLNTLFYSEVQNTGPGAAITKRVTWPGIKKLSDEEILKFTPAQYIQGDAWIPGK 554

Query: 79  GVPYYSGM 87
           GVPY  G+
Sbjct: 555 GVPYILGL 562

[Close]

BLAST of CmaCh06G015360 vs. NCBI nr
Match: gi|659076869|ref|XP_008438906.1| (PREDICTED: pectinesterase-like [Cucumis melo])

HSP 1 Score: 122.9 bits (307), Expect = 2.9e-25
Identity = 53/84 (63.10%), Postives = 63/84 (75.00%), Query Frame = 1


Query: 6   CSQDFNLITEDLVPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTP 65
           C  D  +  E  +PW GDFAL TLFY E +NRGPGAA   RVKW+GIK+ITP+HA+DFT 
Sbjct: 487 CQIDDLIQPEGWLPWMGDFALHTLFYAEINNRGPGAATDKRVKWKGIKKITPQHALDFTV 546

Query: 66  GLFIRGNPWIRRTGVPYYSGMATI 90
           G FIRG+PWI+ TGVPY SGM  +
Sbjct: 547 GRFIRGDPWIKPTGVPYSSGMMAV 570

[Close]

BLAST of CmaCh06G015360 vs. NCBI nr
Match: gi|778678954|ref|XP_004134493.2| (PREDICTED: pectinesterase-like [Cucumis sativus])

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-22
Identity = 48/75 (64.00%), Postives = 58/75 (77.33%), Query Frame = 1


Query: 15  EDLVPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPW 74
           E  +PW G+FAL TLFY E +NRGPGAA   RVKW+GIK+IT +HA+DFT   FIRG+PW
Sbjct: 496 EGWLPWTGNFALNTLFYAEINNRGPGAATDKRVKWKGIKKITMEHALDFTAARFIRGDPW 555

Query: 75  IRRTGVPYYSGMATI 90
           I+ TGVPY SGM  +
Sbjct: 556 IKPTGVPYTSGMMAV 570

[Close]

BLAST of CmaCh06G015360 vs. NCBI nr
Match: gi|296089718|emb|CBI39537.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 113.2 bits (282), Expect = 2.3e-22
Identity = 48/72 (66.67%), Postives = 55/72 (76.39%), Query Frame = 1


Query: 18  VPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPWIRR 77
           +PW GDFAL+T FYTEF NRGPGA   +RVKWRGIK I P HAIDF PG F+ G+ WI  
Sbjct: 506 LPWAGDFALRTCFYTEFRNRGPGAKTHDRVKWRGIKTIKPSHAIDFAPGRFLSGDRWIPS 565

Query: 78  TGVPYYSGMATI 90
           TGVPY SG+ T+
Sbjct: 566 TGVPYNSGLFTL 577

[Close]

BLAST of CmaCh06G015360 vs. NCBI nr
Match: gi|731415746|ref|XP_010659656.1| (PREDICTED: putative pectinesterase/pectinesterase inhibitor 28 [Vitis vinifera])

HSP 1 Score: 113.2 bits (282), Expect = 2.3e-22
Identity = 48/72 (66.67%), Postives = 55/72 (76.39%), Query Frame = 1


Query: 18  VPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPWIRR 77
           +PW GDFAL+T FYTEF NRGPGA   +RVKWRGIK I P HAIDF PG F+ G+ WI  
Sbjct: 506 LPWAGDFALRTCFYTEFRNRGPGAKTHDRVKWRGIKTIKPSHAIDFAPGRFLSGDRWIPS 565

Query: 78  TGVPYYSGMATI 90
           TGVPY SG+ T+
Sbjct: 566 TGVPYNSGLFTL 577

[Close]

BLAST of CmaCh06G015360 vs. NCBI nr
Match: gi|449435986|ref|XP_004135775.1| (PREDICTED: putative pectinesterase/pectinesterase inhibitor 28 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 2.3e-22
Identity = 45/72 (62.50%), Postives = 58/72 (80.56%), Query Frame = 1


Query: 15  EDLVPWEGDFALKTLFYTEFDNRGPGAAKQNRVKWRGIKQITPKHAIDFTPGLFIRGNPW 74
           E  +PW GD+ L+T FYTE++N GPG+ K  RVKWRGIK ITP+HA+DFTPG F++G+ W
Sbjct: 501 EGWLPWAGDWGLRTCFYTEYNNYGPGSDKSKRVKWRGIKNITPQHAVDFTPGRFLKGDRW 560

Query: 75  IRRTGVPYYSGM 87
           I+ TGVPY SG+
Sbjct: 561 IKPTGVPYVSGL 572

The following BLAST results are available for this feature:

BLAST of CmaCh06G015360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PME58_ARATH	1.5e-18	56.92	Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=P...	[more]
PME21_ARATH	8.4e-17	52.94	Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=P...	[more]
PME23_ARATH	1.1e-16	55.38	Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=P...	[more]
PME43_ARATH	1.9e-16	52.94	Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=P...	[more]
PME2_CITSI	2.1e-15	52.94	Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1	[more]

BLAST of CmaCh06G015360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L930_CUCSA	9.4e-23	64.00	Pectinesterase OS=Cucumis sativus GN=Csa_3G164510 PE=4 SV=1	[more]
A0A0A0LYF5_CUCSA	1.6e-22	62.50	Pectinesterase OS=Cucumis sativus GN=Csa_1G569220 PE=4 SV=1	[more]
D7U9X3_VITVI	1.6e-22	66.67	Pectinesterase OS=Vitis vinifera GN=VIT_14s0060g01950 PE=4 SV=1	[more]
W9S2R1_9ROSA	2.3e-21	61.64	Pectinesterase OS=Morus notabilis GN=L484_001919 PE=4 SV=1	[more]
W9S1C5_9ROSA	9.7e-20	57.33	Pectinesterase OS=Morus notabilis GN=L484_007196 PE=4 SV=1	[more]

BLAST of CmaCh06G015360 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49180.1	8.7e-20	56.92	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT3G05610.1	4.8e-18	52.94	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT3G06830.1	6.2e-18	55.38	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT4G15980.1	1.1e-17	52.94	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT5G27870.1	1.5e-16	50.00	Plant invertase/pectin methylesterase inhibitor superfamily	[more]

BLAST of CmaCh06G015360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076869\|ref\|XP_008438906.1\|	2.9e-25	63.10	PREDICTED: pectinesterase-like [Cucumis melo]	[more]
gi\|778678954\|ref\|XP_004134493.2\|	1.3e-22	64.00	PREDICTED: pectinesterase-like [Cucumis sativus]	[more]
gi\|296089718\|emb\|CBI39537.3\|	2.3e-22	66.67	unnamed protein product [Vitis vinifera]	[more]
gi\|731415746\|ref\|XP_010659656.1\|	2.3e-22	66.67	PREDICTED: putative pectinesterase/pectinesterase inhibitor 28 [Vitis vinifera]	[more]
gi\|449435986\|ref\|XP_004135775.1\|	2.3e-22	62.50	PREDICTED: putative pectinesterase/pectinesterase inhibitor 28 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000070	Pectinesterase_cat
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0045490	pectin catabolic process
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005618	cell wall
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0004857	enzyme inhibitor activity
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G015360.1	CmaCh06G015360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 17..72 score: 3.0
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 16..85 score: 2.04
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 17..84 score: 3.3
None	No IPR available	PANTHER	PTHR31707	FAMILY NOT NAMED	coord: 19..88 score: 1.5
None	No IPR available	PANTHER	PTHR31707:SF17	SUBFAMILY NOT NAMED	coord: 19..88 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh06G015360	CmoCh06G015340	Cucurbita moschata (Rifu)	cmacmoB829
CmaCh06G015360	CmoCh06G015130	Cucurbita moschata (Rifu)	cmacmoB835
CmaCh06G015360	Carg07155	Silver-seed gourd	carcmaB0145

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh06G015360	Cucumber (Chinese Long) v3	cmacucB0965
CmaCh06G015360	Cucumber (Chinese Long) v3	cmacucB1001
CmaCh06G015360	Watermelon (97103) v2	cmawmbB856
CmaCh06G015360	Watermelon (97103) v2	cmawmbB865
CmaCh06G015360	Wax gourd	cmawgoB1002
CmaCh06G015360	Wax gourd	cmawgoB1006
CmaCh06G015360	Cucurbita maxima (Rimu)	cmacmaB284
CmaCh06G015360	Cucurbita maxima (Rimu)	cmacmaB369
CmaCh06G015360	Cucurbita maxima (Rimu)	cmacmaB554
CmaCh06G015360	Cucumber (Gy14) v1	cgycmaB0112
CmaCh06G015360	Cucumber (Gy14) v1	cgycmaB0727
CmaCh06G015360	Cucurbita moschata (Rifu)	cmacmoB797
CmaCh06G015360	Wild cucumber (PI 183967)	cmacpiB826
CmaCh06G015360	Wild cucumber (PI 183967)	cmacpiB862
CmaCh06G015360	Cucumber (Chinese Long) v2	cmacuB814
CmaCh06G015360	Cucumber (Chinese Long) v2	cmacuB845
CmaCh06G015360	Melon (DHL92) v3.5.1	cmameB747
CmaCh06G015360	Melon (DHL92) v3.5.1	cmameB763
CmaCh06G015360	Watermelon (Charleston Gray)	cmawcgB737
CmaCh06G015360	Watermelon (Charleston Gray)	cmawcgB745
CmaCh06G015360	Watermelon (97103) v1	cmawmB798
CmaCh06G015360	Watermelon (97103) v1	cmawmB811
CmaCh06G015360	Cucurbita pepo (Zucchini)	cmacpeB837
CmaCh06G015360	Cucurbita pepo (Zucchini)	cmacpeB853
CmaCh06G015360	Bottle gourd (USVL1VR-Ls)	cmalsiB741
CmaCh06G015360	Bottle gourd (USVL1VR-Ls)	cmalsiB757
CmaCh06G015360	Cucumber (Gy14) v2	cgybcmaB427
CmaCh06G015360	Cucumber (Gy14) v2	cgybcmaB858
CmaCh06G015360	Melon (DHL92) v3.6.1	cmamedB846
CmaCh06G015360	Melon (DHL92) v3.6.1	cmamedB863
CmaCh06G015360	Silver-seed gourd	carcmaB0393