CmaCh06G015270 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G015270
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Pectinesterase
Location	Cma_Chr06 : 9618691 .. 9619086 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGTGATGAGCCCACTGGTATCGTCCTCCAAAATTGCACCATCTCTTCCGACCCTGACTACTACCCCGTTCGCCATACCAGTAAGTCCTACCTTGGTCGCCCATGGAAGCAATATTCAAGGACCGTCGTCATGCAAAGCCAAATCGACGACTTGATCCAGCCTGAAGGTTGGCTTCCATGGAATGGTGATTTTGCTCTCAATACTTTGTATTACACGGAGTTTGACAACAGAGGACCTGGTGCAGCAAAAGAAAATAGAGTTAAGTGGAAGGGAATTAAGCAGATCACCGCAAAAGAGGCCATCAATTTCACCCCTTCGTTGTTTATTCATGGTGATTCTTGGATCAAGAACACCGGAATATCCTACACGGGTGCCTTGATGAAAATCTAA

mRNA sequence

ATGGAGAGTGATGAGCCCACTGGTATCGTCCTCCAAAATTGCACCATCTCTTCCGACCCTGACTACTACCCCGTTCGCCATACCAGTAAGTCCTACCTTGGTCGCCCATGGAAGCAATATTCAAGGACCGTCGTCATGCAAAGCCAAATCGACGACTTGATCCAGCCTGAAGGTTGGCTTCCATGGAATGGTGATTTTGCTCTCAATACTTTGTATTACACGGAGTTTGACAACAGAGGACCTGGTGCAGCAAAAGAAAATAGAGTTAAGTGGAAGGGAATTAAGCAGATCACCGCAAAAGAGGCCATCAATTTCACCCCTTCGTTGTTTATTCATGGTGATTCTTGGATCAAGAACACCGGAATATCCTACACGGGTGCCTTGATGAAAATCTAA

Coding sequence (CDS)

ATGGAGAGTGATGAGCCCACTGGTATCGTCCTCCAAAATTGCACCATCTCTTCCGACCCTGACTACTACCCCGTTCGCCATACCAGTAAGTCCTACCTTGGTCGCCCATGGAAGCAATATTCAAGGACCGTCGTCATGCAAAGCCAAATCGACGACTTGATCCAGCCTGAAGGTTGGCTTCCATGGAATGGTGATTTTGCTCTCAATACTTTGTATTACACGGAGTTTGACAACAGAGGACCTGGTGCAGCAAAAGAAAATAGAGTTAAGTGGAAGGGAATTAAGCAGATCACCGCAAAAGAGGCCATCAATTTCACCCCTTCGTTGTTTATTCATGGTGATTCTTGGATCAAGAACACCGGAATATCCTACACGGGTGCCTTGATGAAAATCTAA

Protein sequence

MESDEPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLPWNGDFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTGISYTGALMKI

Homology

[Close]

BLAST of CmaCh06G015270 vs. Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.0e-42
Identity = 69/122 (56.56%), Postives = 94/122 (77.05%), Query Frame = 1


Query: 5   EPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLPWNG 64
           E TG+VLQNC I+ +P Y PV+  +K+YLGRPWK++SRT++M + IDD+I P GWLPWNG
Sbjct: 447 ESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNG 506

Query: 65  DFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTGISY 124
           DFALNTLYY E++N GPG+ +  RVKW GIK+++ K+A+ FTP+ F+ G+ WI    + Y
Sbjct: 507 DFALNTLYYAEYENNGPGSNQAQRVKWPGIKKLSPKQALRFTPARFLRGNLWIPPNRVPY 566

Query: 125 TG 127
            G
Sbjct: 567 MG 568

[Close]

BLAST of CmaCh06G015270 vs. Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 3.6e-40
Identity = 67/125 (53.60%), Postives = 89/125 (71.20%), Query Frame = 1


Query: 5   EPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLPWNG 64
           E TG V Q CTI+ +PDY  V+ TSK+YLGRPWK+YSRT++M + I D +QP+GW PW G
Sbjct: 442 ESTGFVFQGCTIAGEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLG 501

Query: 65  DFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTGISY 124
           DF L TL+Y+E  N GPG+A  NRV W GIK ++ ++ + FTP+ +I GD WI   G+ Y
Sbjct: 502 DFGLKTLFYSEVQNTGPGSALANRVTWAGIKTLSEEDILKFTPAQYIQGDDWIPGKGVPY 561

Query: 125 TGALM 130
           T  L+
Sbjct: 562 TTGLL 566

[Close]

BLAST of CmaCh06G015270 vs. Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 161.0 bits (406), Expect = 8.8e-39
Identity = 65/121 (53.72%), Postives = 90/121 (74.38%), Query Frame = 1


Query: 5   EPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLPWNG 64
           E TG+VL  C I+ DP Y P++  +K+YLGRPWK++SRT++M++ IDD+I P GWLPW+G
Sbjct: 445 ESTGLVLHGCHITGDPAYIPMKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSG 504

Query: 65  DFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTGISY 124
           DFAL TLYY E  N GPG+ +  RVKW GIK++T ++A+ +T   F+ GD+WI  T + Y
Sbjct: 505 DFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLTPQDALLYTGDRFLRGDTWIPQTQVPY 564

Query: 125 T 126
           T
Sbjct: 565 T 565

[Close]

BLAST of CmaCh06G015270 vs. Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-38
Identity = 66/120 (55.00%), Postives = 86/120 (71.67%), Query Frame = 1


Query: 5   EPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLPWNG 64
           E TG VLQ CTI  +PDY  V+  SK+YLGRPWK+YSRT++M + I D + PEGW PW G
Sbjct: 439 ESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFVPPEGWQPWLG 498

Query: 65  DFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTGISY 124
           +F LNTL+Y+E  N GPGAA   RV W GIK+++ +E + FTP+ +I GD+WI   G+ Y
Sbjct: 499 EFGLNTLFYSEVQNTGPGAAITKRVTWPGIKKLSDEEILKFTPAQYIQGDAWIPGKGVPY 558

[Close]

BLAST of CmaCh06G015270 vs. Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 9.1e-36
Identity = 62/120 (51.67%), Postives = 88/120 (73.33%), Query Frame = 1


Query: 5   EPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLPWNG 64
           E TGIV+ N  I+ D  Y PV+  ++++LGRPWK++SRT++M ++IDD+I PEGWL WN 
Sbjct: 579 ETTGIVIHNSRITGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNE 638

Query: 65  DFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTGISY 124
            FALNTL+YTE+ NRG G+ +  RV+W+GIK+I+ + A  F P  F+ G++WI  T I Y
Sbjct: 639 TFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRISDRAAREFAPGNFLRGNTWIPQTRIPY 698

[Close]

BLAST of CmaCh06G015270 vs. TrEMBL
Match: A0A0A0L930_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_3G164510 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.2e-50
Identity = 86/127 (67.72%), Postives = 107/127 (84.25%), Query Frame = 1


Query: 5   EPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLPWNG 64
           EPT I+LQNC ISS PD++P+RH +K++LGRPWKQYSRT++MQSQIDDLIQPEGWLPW G
Sbjct: 444 EPTAIILQNCAISSAPDFFPIRHINKAFLGRPWKQYSRTIIMQSQIDDLIQPEGWLPWTG 503

Query: 65  DFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTGISY 124
           +FALNTL+Y E +NRGPGAA + RVKWKGIK+IT + A++FT + FI GD WIK TG+ Y
Sbjct: 504 NFALNTLFYAEINNRGPGAATDKRVKWKGIKKITMEHALDFTAARFIRGDPWIKPTGVPY 563

Query: 125 TGALMKI 132
           T  +M +
Sbjct: 564 TSGMMAV 570

[Close]

BLAST of CmaCh06G015270 vs. TrEMBL
Match: A0A061EQE7_THECC (Pectinesterase OS=Theobroma cacao GN=TCM_021251 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.5e-45
Identity = 80/130 (61.54%), Postives = 102/130 (78.46%), Query Frame = 1


Query: 1   MESDEPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWL 60
           +E  E + +VLQNCTIS DP+Y PV+  +K+YLGRPWK++SRT++MQSQIDD+I PEGWL
Sbjct: 555 IERREVSALVLQNCTISGDPEYLPVKDKNKAYLGRPWKEFSRTLIMQSQIDDIIAPEGWL 614

Query: 61  PWNGDFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNT 120
           PWNGDFALNTL+Y EF NRGPGA + +RV W+GIK+I A  A  FTP +F+ GD WI   
Sbjct: 615 PWNGDFALNTLWYAEFGNRGPGAVQTHRVTWRGIKKINAAIARRFTPGVFLRGDDWIPKA 674

Query: 121 GISYTGALMK 131
           G+ YT  L++
Sbjct: 675 GVPYTPGLIR 684

[Close]

BLAST of CmaCh06G015270 vs. TrEMBL
Match: A0A067K7P3_JATCU (Pectinesterase OS=Jatropha curcas GN=JCGZ_18914 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.3e-44
Identity = 80/130 (61.54%), Postives = 103/130 (79.23%), Query Frame = 1


Query: 2   ESDEPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLP 61
           ES E TG VLQNC I++DP+YYPVR  +K+YLGRPWK+YSRTV MQ QIDDLI P+GWLP
Sbjct: 440 ESREATGFVLQNCNITADPEYYPVRFENKAYLGRPWKEYSRTVYMQCQIDDLIDPKGWLP 499

Query: 62  WNGDFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTG 121
           W G FAL+TL Y+E++NRGPG+  ++RV WKGIK+++A++A  FT + FI GD WI  TG
Sbjct: 500 WMGSFALDTLSYSEYENRGPGSVTKDRVTWKGIKKLSAQDAAAFTVAKFIGGDLWIPATG 559

Query: 122 ISYTGALMKI 132
           +SY   +M +
Sbjct: 560 VSYASGMMNV 569

[Close]

BLAST of CmaCh06G015270 vs. TrEMBL
Match: A0A067JYH5_JATCU (Pectinesterase OS=Jatropha curcas GN=JCGZ_18913 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 8.3e-44
Identity = 80/130 (61.54%), Postives = 103/130 (79.23%), Query Frame = 1


Query: 2   ESDEPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLP 61
           ES E TG VLQNC I++D +YYPVR  +K+YLGRPWK+YSRTV MQ QIDDLI P+GWLP
Sbjct: 440 ESREATGFVLQNCNITADREYYPVRFENKAYLGRPWKEYSRTVYMQCQIDDLIDPKGWLP 499

Query: 62  WNGDFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTG 121
           W G FAL+TL Y+E++NRGPG+  ++RV WKGIK+++A++A  FT + FI GD WI +TG
Sbjct: 500 WMGSFALDTLSYSEYENRGPGSVTKDRVTWKGIKKLSAQDADAFTVAKFIGGDLWIPDTG 559

Query: 122 ISYTGALMKI 132
           ISY   +M +
Sbjct: 560 ISYASGMMNV 569

[Close]

BLAST of CmaCh06G015270 vs. TrEMBL
Match: B9HXR2_POPTR (Pectinesterase OS=Populus trichocarpa GN=POPTR_0010s01380g PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.4e-43
Identity = 76/128 (59.38%), Postives = 100/128 (78.12%), Query Frame = 1


Query: 2   ESDEPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLP 61
           E+ EPTG V+QNCTI++DP Y+PVR  +K+YLGRPW++ SRT+VMQS IDDLI PEGWLP
Sbjct: 442 ETREPTGFVIQNCTITADPQYFPVRLQNKAYLGRPWRELSRTIVMQSHIDDLIAPEGWLP 501

Query: 62  WNGDFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTG 121
           W G F LNTL+Y+E++N+G GA + NRVKW GIK++T + A  +T + FI GD WI  TG
Sbjct: 502 WLGSFGLNTLFYSEYNNKGQGAVETNRVKWAGIKKLTPEAADGYTAAKFIQGDEWIPQTG 561

Query: 122 ISYTGALM 130
           + YT  ++
Sbjct: 562 VPYTAGMI 569

[Close]

BLAST of CmaCh06G015270 vs. TAIR10
Match: AT5G49180.1 (AT5G49180.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 171.8 bits (434), Expect = 2.8e-43
Identity = 69/122 (56.56%), Postives = 94/122 (77.05%), Query Frame = 1


Query: 5   EPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLPWNG 64
           E TG+VLQNC I+ +P Y PV+  +K+YLGRPWK++SRT++M + IDD+I P GWLPWNG
Sbjct: 447 ESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNG 506

Query: 65  DFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTGISY 124
           DFALNTLYY E++N GPG+ +  RVKW GIK+++ K+A+ FTP+ F+ G+ WI    + Y
Sbjct: 507 DFALNTLYYAEYENNGPGSNQAQRVKWPGIKKLSPKQALRFTPARFLRGNLWIPPNRVPY 566

Query: 125 TG 127
            G
Sbjct: 567 MG 568

[Close]

BLAST of CmaCh06G015270 vs. TAIR10
Match: AT3G05610.1 (AT3G05610.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 165.6 bits (418), Expect = 2.0e-41
Identity = 67/125 (53.60%), Postives = 89/125 (71.20%), Query Frame = 1


Query: 5   EPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLPWNG 64
           E TG V Q CTI+ +PDY  V+ TSK+YLGRPWK+YSRT++M + I D +QP+GW PW G
Sbjct: 442 ESTGFVFQGCTIAGEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLG 501

Query: 65  DFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTGISY 124
           DF L TL+Y+E  N GPG+A  NRV W GIK ++ ++ + FTP+ +I GD WI   G+ Y
Sbjct: 502 DFGLKTLFYSEVQNTGPGSALANRVTWAGIKTLSEEDILKFTPAQYIQGDDWIPGKGVPY 561

Query: 125 TGALM 130
           T  L+
Sbjct: 562 TTGLL 566

[Close]

BLAST of CmaCh06G015270 vs. TAIR10
Match: AT3G06830.1 (AT3G06830.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 161.0 bits (406), Expect = 5.0e-40
Identity = 65/121 (53.72%), Postives = 90/121 (74.38%), Query Frame = 1


Query: 5   EPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLPWNG 64
           E TG+VL  C I+ DP Y P++  +K+YLGRPWK++SRT++M++ IDD+I P GWLPW+G
Sbjct: 445 ESTGLVLHGCHITGDPAYIPMKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSG 504

Query: 65  DFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTGISY 124
           DFAL TLYY E  N GPG+ +  RVKW GIK++T ++A+ +T   F+ GD+WI  T + Y
Sbjct: 505 DFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLTPQDALLYTGDRFLRGDTWIPQTQVPY 564

Query: 125 T 126
           T
Sbjct: 565 T 565

[Close]

BLAST of CmaCh06G015270 vs. TAIR10
Match: AT5G27870.1 (AT5G27870.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-39
Identity = 66/120 (55.00%), Postives = 86/120 (71.67%), Query Frame = 1


Query: 5   EPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLPWNG 64
           E TG VLQ CTI  +PDY  V+  SK+YLGRPWK+YSRT++M + I D + PEGW PW G
Sbjct: 439 ESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFVPPEGWQPWLG 498

Query: 65  DFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTGISY 124
           +F LNTL+Y+E  N GPGAA   RV W GIK+++ +E + FTP+ +I GD+WI   G+ Y
Sbjct: 499 EFGLNTLFYSEVQNTGPGAAITKRVTWPGIKKLSDEEILKFTPAQYIQGDAWIPGKGVPY 558

[Close]

BLAST of CmaCh06G015270 vs. TAIR10
Match: AT4G15980.1 (AT4G15980.1 Plant invertase/pectin methylesterase inhibitor superfamily)

HSP 1 Score: 151.0 bits (380), Expect = 5.2e-37
Identity = 62/120 (51.67%), Postives = 88/120 (73.33%), Query Frame = 1


Query: 5   EPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLPWNG 64
           E TGIV+ N  I+ D  Y PV+  ++++LGRPWK++SRT++M ++IDD+I PEGWL WN 
Sbjct: 579 ETTGIVIHNSRITGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNE 638

Query: 65  DFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTGISY 124
            FALNTL+YTE+ NRG G+ +  RV+W+GIK+I+ + A  F P  F+ G++WI  T I Y
Sbjct: 639 TFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRISDRAAREFAPGNFLRGNTWIPQTRIPY 698

[Close]

BLAST of CmaCh06G015270 vs. NCBI nr
Match: gi|778678954|ref|XP_004134493.2| (PREDICTED: pectinesterase-like [Cucumis sativus])

HSP 1 Score: 207.2 bits (526), Expect = 1.7e-50
Identity = 86/127 (67.72%), Postives = 107/127 (84.25%), Query Frame = 1


Query: 5   EPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLPWNG 64
           EPT I+LQNC ISS PD++P+RH +K++LGRPWKQYSRT++MQSQIDDLIQPEGWLPW G
Sbjct: 444 EPTAIILQNCAISSAPDFFPIRHINKAFLGRPWKQYSRTIIMQSQIDDLIQPEGWLPWTG 503

Query: 65  DFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTGISY 124
           +FALNTL+Y E +NRGPGAA + RVKWKGIK+IT + A++FT + FI GD WIK TG+ Y
Sbjct: 504 NFALNTLFYAEINNRGPGAATDKRVKWKGIKKITMEHALDFTAARFIRGDPWIKPTGVPY 563

Query: 125 TGALMKI 132
           T  +M +
Sbjct: 564 TSGMMAV 570

[Close]

BLAST of CmaCh06G015270 vs. NCBI nr
Match: gi|659076869|ref|XP_008438906.1| (PREDICTED: pectinesterase-like [Cucumis melo])

HSP 1 Score: 204.5 bits (519), Expect = 1.1e-49
Identity = 86/127 (67.72%), Postives = 105/127 (82.68%), Query Frame = 1


Query: 5   EPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLPWNG 64
           EPT I+LQNC ISSDP ++PVRH +K+YLGRPWKQYSRT++MQ QIDDLIQPEGWLPW G
Sbjct: 444 EPTAIILQNCAISSDPTFFPVRHINKAYLGRPWKQYSRTIIMQCQIDDLIQPEGWLPWMG 503

Query: 65  DFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTGISY 124
           DFAL+TL+Y E +NRGPGAA + RVKWKGIK+IT + A++FT   FI GD WIK TG+ Y
Sbjct: 504 DFALHTLFYAEINNRGPGAATDKRVKWKGIKKITPQHALDFTVGRFIRGDPWIKPTGVPY 563

Query: 125 TGALMKI 132
           +  +M +
Sbjct: 564 SSGMMAV 570

[Close]

BLAST of CmaCh06G015270 vs. NCBI nr
Match: gi|590661338|ref|XP_007035646.1| (Plant invertase/pectin methylesterase inhibitor superfamily, putative [Theobroma cacao])

HSP 1 Score: 190.3 bits (482), Expect = 2.2e-45
Identity = 80/130 (61.54%), Postives = 102/130 (78.46%), Query Frame = 1


Query: 1   MESDEPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWL 60
           +E  E + +VLQNCTIS DP+Y PV+  +K+YLGRPWK++SRT++MQSQIDD+I PEGWL
Sbjct: 555 IERREVSALVLQNCTISGDPEYLPVKDKNKAYLGRPWKEFSRTLIMQSQIDDIIAPEGWL 614

Query: 61  PWNGDFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNT 120
           PWNGDFALNTL+Y EF NRGPGA + +RV W+GIK+I A  A  FTP +F+ GD WI   
Sbjct: 615 PWNGDFALNTLWYAEFGNRGPGAVQTHRVTWRGIKKINAAIARRFTPGVFLRGDDWIPKA 674

Query: 121 GISYTGALMK 131
           G+ YT  L++
Sbjct: 675 GVPYTPGLIR 684

[Close]

BLAST of CmaCh06G015270 vs. NCBI nr
Match: gi|802701836|ref|XP_012083982.1| (PREDICTED: putative pectinesterase/pectinesterase inhibitor 28 [Jatropha curcas])

HSP 1 Score: 187.2 bits (474), Expect = 1.8e-44
Identity = 80/130 (61.54%), Postives = 103/130 (79.23%), Query Frame = 1


Query: 2   ESDEPTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLP 61
           ES E TG VLQNC I++DP+YYPVR  +K+YLGRPWK+YSRTV MQ QIDDLI P+GWLP
Sbjct: 440 ESREATGFVLQNCNITADPEYYPVRFENKAYLGRPWKEYSRTVYMQCQIDDLIDPKGWLP 499

Query: 62  WNGDFALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTG 121
           W G FAL+TL Y+E++NRGPG+  ++RV WKGIK+++A++A  FT + FI GD WI  TG
Sbjct: 500 WMGSFALDTLSYSEYENRGPGSVTKDRVTWKGIKKLSAQDAAAFTVAKFIGGDLWIPATG 559

Query: 122 ISYTGALMKI 132
           +SY   +M +
Sbjct: 560 VSYASGMMNV 569

[Close]

BLAST of CmaCh06G015270 vs. NCBI nr
Match: gi|1009163283|ref|XP_015899883.1| (PREDICTED: probable pectinesterase/pectinesterase inhibitor 21 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 186.8 bits (473), Expect = 2.4e-44
Identity = 77/126 (61.11%), Postives = 99/126 (78.57%), Query Frame = 1


Query: 6   PTGIVLQNCTISSDPDYYPVRHTSKSYLGRPWKQYSRTVVMQSQIDDLIQPEGWLPWNGD 65
           P+ I+LQNCTIS DP Y PV+  +K+YLGRPWK++SRT++MQSQIDD+IQP+GWLPW G 
Sbjct: 450 PSAIILQNCTISGDPLYMPVKDVNKAYLGRPWKEFSRTIIMQSQIDDIIQPDGWLPWAGT 509

Query: 66  FALNTLYYTEFDNRGPGAAKENRVKWKGIKQITAKEAINFTPSLFIHGDSWIKNTGISYT 125
           FA+N+ +YTEF+NRG GA    RVKWKGIK IT + A++FTP  F+ GD WIK TGI Y 
Sbjct: 510 FAINSCFYTEFNNRGAGADMSKRVKWKGIKTITPQHAVDFTPGRFLGGDRWIKATGIPYV 569

Query: 126 GALMKI 132
             ++ +
Sbjct: 570 SGMINV 575

The following BLAST results are available for this feature:

BLAST of CmaCh06G015270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PME58_ARATH	5.0e-42	56.56	Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=P...	[more]
PME21_ARATH	3.6e-40	53.60	Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=P...	[more]
PME23_ARATH	8.8e-39	53.72	Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=P...	[more]
PME28_ARATH	2.0e-38	55.00	Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=P...	[more]
PME43_ARATH	9.1e-36	51.67	Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=P...	[more]

BLAST of CmaCh06G015270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L930_CUCSA	1.2e-50	67.72	Pectinesterase OS=Cucumis sativus GN=Csa_3G164510 PE=4 SV=1	[more]
A0A061EQE7_THECC	1.5e-45	61.54	Pectinesterase OS=Theobroma cacao GN=TCM_021251 PE=4 SV=1	[more]
A0A067K7P3_JATCU	1.3e-44	61.54	Pectinesterase OS=Jatropha curcas GN=JCGZ_18914 PE=4 SV=1	[more]
A0A067JYH5_JATCU	8.3e-44	61.54	Pectinesterase OS=Jatropha curcas GN=JCGZ_18913 PE=4 SV=1	[more]
B9HXR2_POPTR	2.4e-43	59.38	Pectinesterase OS=Populus trichocarpa GN=POPTR_0010s01380g PE=4 SV=1	[more]

BLAST of CmaCh06G015270 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49180.1	2.8e-43	56.56	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT3G05610.1	2.0e-41	53.60	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT3G06830.1	5.0e-40	53.72	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT5G27870.1	1.1e-39	55.00	Plant invertase/pectin methylesterase inhibitor superfamily	[more]
AT4G15980.1	5.2e-37	51.67	Plant invertase/pectin methylesterase inhibitor superfamily	[more]

BLAST of CmaCh06G015270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778678954\|ref\|XP_004134493.2\|	1.7e-50	67.72	PREDICTED: pectinesterase-like [Cucumis sativus]	[more]
gi\|659076869\|ref\|XP_008438906.1\|	1.1e-49	67.72	PREDICTED: pectinesterase-like [Cucumis melo]	[more]
gi\|590661338\|ref\|XP_007035646.1\|	2.2e-45	61.54	Plant invertase/pectin methylesterase inhibitor superfamily, putative [Theobroma...	[more]
gi\|802701836\|ref\|XP_012083982.1\|	1.8e-44	61.54	PREDICTED: putative pectinesterase/pectinesterase inhibitor 28 [Jatropha curcas]	[more]
gi\|1009163283\|ref\|XP_015899883.1\|	2.4e-44	61.11	PREDICTED: probable pectinesterase/pectinesterase inhibitor 21 isoform X1 [Zizip...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000070	Pectinesterase_cat
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0045490	pectin catabolic process
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005618	cell wall
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0004857	enzyme inhibitor activity
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G015270.1	CmaCh06G015270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 3..114 score: 5.2
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 3..125 score: 2.2
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 4..125 score: 2.4
None	No IPR available	PANTHER	PTHR31707	FAMILY NOT NAMED	coord: 1..130 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh06G015270	CmoCh06G015190	Cucurbita moschata (Rifu)	cmacmoB835

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh06G015270	Cucumber (Gy14) v2	cgybcmaB427
CmaCh06G015270	Cucumber (Gy14) v2	cgybcmaB858
CmaCh06G015270	Melon (DHL92) v3.6.1	cmamedB846
CmaCh06G015270	Melon (DHL92) v3.6.1	cmamedB863
CmaCh06G015270	Silver-seed gourd	carcmaB0145
CmaCh06G015270	Silver-seed gourd	carcmaB0393
CmaCh06G015270	Cucumber (Chinese Long) v3	cmacucB0965
CmaCh06G015270	Cucumber (Chinese Long) v3	cmacucB1001
CmaCh06G015270	Watermelon (97103) v2	cmawmbB856
CmaCh06G015270	Watermelon (97103) v2	cmawmbB865
CmaCh06G015270	Wax gourd	cmawgoB1002
CmaCh06G015270	Wax gourd	cmawgoB1006
CmaCh06G015270	Cucurbita maxima (Rimu)	cmacmaB284
CmaCh06G015270	Cucurbita maxima (Rimu)	cmacmaB369
CmaCh06G015270	Cucurbita maxima (Rimu)	cmacmaB554
CmaCh06G015270	Cucumber (Gy14) v1	cgycmaB0112
CmaCh06G015270	Cucumber (Gy14) v1	cgycmaB0727
CmaCh06G015270	Cucurbita moschata (Rifu)	cmacmoB797
CmaCh06G015270	Cucurbita moschata (Rifu)	cmacmoB829
CmaCh06G015270	Wild cucumber (PI 183967)	cmacpiB826
CmaCh06G015270	Wild cucumber (PI 183967)	cmacpiB862
CmaCh06G015270	Cucumber (Chinese Long) v2	cmacuB814
CmaCh06G015270	Cucumber (Chinese Long) v2	cmacuB845
CmaCh06G015270	Melon (DHL92) v3.5.1	cmameB747
CmaCh06G015270	Melon (DHL92) v3.5.1	cmameB763
CmaCh06G015270	Watermelon (Charleston Gray)	cmawcgB737
CmaCh06G015270	Watermelon (Charleston Gray)	cmawcgB745
CmaCh06G015270	Watermelon (97103) v1	cmawmB798
CmaCh06G015270	Watermelon (97103) v1	cmawmB811
CmaCh06G015270	Cucurbita pepo (Zucchini)	cmacpeB837
CmaCh06G015270	Cucurbita pepo (Zucchini)	cmacpeB853
CmaCh06G015270	Bottle gourd (USVL1VR-Ls)	cmalsiB741
CmaCh06G015270	Bottle gourd (USVL1VR-Ls)	cmalsiB757