CmaCh06G009780 (gene) Cucurbita maxima (Rimu)

NameCmaCh06G009780
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRetrotransposon protein, putative, Ty1-copia subclass
LocationCma_Chr06 : 6634987 .. 6638217 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGCCGACCCATCTATTCTAGATCAGTCTAAAAATTATACGGGTAAGGACTCTGTGATCGTAGGAAACGGTGCATCTCAACCCATTACCCACACCGGTACTCTTTCTCATGTTCCAAATATTCACTTATTAGATGTCTTGGTTGTCCCTCACCTCACTAAAAATCTTCTTTCCATAAGTAAATTAACGTCTGATTTTCCTCTCTCCGTTACATTTACTAATAATCTTATTACTATCTAGAATCATCAAACAGGAAGGGTGGTGGCAACCGGTAAAAGAGATGGAGGGCTATATGTGCTGGAGCGCGGCAACTCTGCTTTTATTTCAGCCCTTAGAAACAAATCTTTACGTGCTTCATATGATTTATGGCATGCTCGTCTGGGCCATATGAATCATTTTGTTATTTCTTTTTTAAATAGAAAAGATCATCTTTCTCTTACGTCTTTATTGCCTTCTCCATTATTATGTAATACTTGTCAGCTTGCGAAAAGTCATCGATTGCCTTATTCCCGCAATGAGCGTAGGTCGTCTCATATGTTAGATCTTATTCATTGTGATCTTTGGGGTCCTCCCGTCAAATCAAATTCGGGTTTTCTTTATTATGCTATTTTTATTGATGATTATTCTCGATTCACTTGGTTTTACCCTTTAAAATTTAAATCTGATTTTTTTTGATATTTTTTTTCAATTTAAAAAATTTGTGAAAAATCAATATTCTTCTCGTATCAAGGTATTTCAAAGCGAGGGTGGTACCGAATTTACTAGTACTTGTTTCAAAACTCATTTACGTAATTCTAGCATCCACCGTCAACTCTCTTGTCCATATACATCTGCTCAAAATGGTCGTGATGAGAGNNNNNNNNNNAGCATCCACCGTCAACTCTCTTGTCCATATACATCTGCTCAAAATGGTCGTGATGAGAGAAAACATCGTCATGTGACTGAGACTGGCTTGACCCTTCTCTTTCACTTTCATCTTTCTCCTCGTTTTTGGGTTGACGCCTTCAGCACTGCAGCTTATATTATCAACCGGTTGCCTACTCCACTTCTTGGAGATAAGTCACCCTTTGAACTCCTTTATGGCTACACTCCACATTATGACAATTTTCATCCCTTTGGTTGTCGTGTTTATCCTTATTTGCGTGATTATATGCCTAACAAGCTTTCTGCCCACAACATTCATTGTATTTATTTTGGTTATAGTCCTGCTCATAAAGGGTTCCGCTGTCTTGATCCCGCCACCACTAAGCTATATATCACTTGCCATGCTCAATTTGATGAAACTCACTTTCCTGTTATCCCTAGCTCCTAGGCCCAACCTCTTTCCTCTATTCCTATTTCAAATTTCTTGGAACCACATCTTCATCATATTGATTCATCCCCCCACTGCTTCATCACCGCACATTCCTTGATCCAGTTCATCCCCATGTGATATCTGTTCTGACCTTGTAGATGAGTCTGTGCAGGTTGATACTTCTCTTGCAGGTTCCACTTTGCCACCCTCGACTTCTAATTCAACGTCTATTGAACCTCCTGTTGATTTCTCTTCTTTGGGCACTCATCCTATGATCACACGAGCCAAAACTGGTATATTCAAGACTCGTCATCCAGCAAATCTTGGTATTTTGGCTCATCTGGACTTCTTTCTACTCTTCTTGCATCCACTGAGCCAAAAGAATTCAAATTTGCAGCTAAGAATCCTGCTTGGGTGGCTGCCATGGATGAAGAAATTCGAGTGTTACAACAAAATGATACTTGGACTTTGGTTCCTCGCCCTGCCAACACCAACATCGTGGGCTCTAAATGGGTGTTTCGTATTAAATATTTGCCTGATGGATCCGTTGAGCATTTCAAGGCTTGTCTTGTTGCCAAAGGTTATACTCAGGTTCCTGGTCTTGACTACACTGACACTTTCAGTCCGGTTGTCAAAGCTACCACTATCCGTGTTGTGCTTTTTATTGCAGTCACAAATAAATGGCCTCTTCGACAACTTGATGTCAAGAATGCTTTTCTCAATGGAACTCTTATTGAACGTGTTCATATGGAACAACCTCCTGAGTATATTGATCCTCGATTTCCCACTCATGTTTGTCTATTAAAGAAAGCCCTTTATGGCTTAAAGCAAGCTCCTCGTGCTTGGTTTCAGCGTTTTAGCTCATTTCTTCTCACACTTGGGTTTTCTTGCAGTCGCGCTGACACGTTCCTTTTTGTCTTTCATTAGCAATCTAACATTATCTATTTGCTTCTTTATGTTGATGACATTATTGTTACCGACAACAACTCATCTCTTATTGACAGCTTTACTCGCAAGCTTCATTTTGAGTTTGCTACCAAAGATTTGGGTTCTCTAAGTTACTTTCTTGGTCTTGAAGCTTCACCCACTTCTGATGGTCTCTTTATTAGTCAGTTAAAATATGCTCGAGATATTCTTATTCGTGCTCAGTTGCTCGATAGCAAACCAGTTCACACTCCCATGGTTGTTTCTCAGCACCTGATTACTGATGGTTCTCCTTTCTCTGACCCTACTCTCTACAAATCTCTTGTTGGCGCCCTTCAATACTTGACTATTACGCGTCCAGATATTGCCTATGTTGTCAATTCTGTCAGTCAATTCCTGCATGCCCCTACTGCAGATCACTTTCTTGCTGTCAAACGTATTCTTCGCTATGTCAAAGGAACACTCCACTTTGGTCTTACCTTTCGTCCATCCACTATTCCTAGTACGCTAGTCGCTTATTCGGATGCTGACTGGGCTGGTTGTCCCGATACTCGTCGTTCTACATCCGGCTATTCTATTTATCTTGGTAACAATCTCGTTTCTTGGAGTGCCAAAAAGCAACCTACTGTCTCAAGCTCCAGCTGTGAATCTGAGTATCGTGCTCTTGCCACAACTGCTGCTGAACTTTTTTGGGTTACGCATCTTTTGCATGACCTCAAGGTCTCTATTTCAGAGCAGCCCTTACTCTTATGTGACAACAAAAGTGCTATTTTTTTGAGCTCTAATCCTGTTTCTCACAAGCGGGCCAAACATGTTGAACTAGATTATCATTTTCTTCGAGAACTTGTTATCGTTGGCAAACTTCGCACACAATATTTACTCTCTCATCTTCAAGTTGTTGACATCTTTACAAAGAGTATTTCTCGACCTCTCTTTGAATTTTTCAGATCCAAGCTTTACGTTCGTTTAAATCCGACGCTCAGCTTGCAGGGGGTGTCAAGGATAGTTGA

mRNA sequence

ATGACTGCCGACCCATCTATTCTAGATCAGTCTAAAAATTATACGGGTAAGGACTCTGTGATCGTAGGAAACGGTGCATCTCAACCCATTACCCACACCGGTTCCACTTTGCCACCCTCGACTTCTAATTCAACGTCTATTGAACCTCCTGTTGATTTCTCTTCTTTGGGCACTCATCCTATGATCACACGAGCCAAAACTGGTATATTCAAGACTCGTCATCCAGCAAATCTTGCTAAGAATCCTGCTTGGGTGGCTGCCATGGATGAAGAAATTCGAGTGTTACAACAAAATGATACTTGGACTTTGGTTCCTCGCCCTGCCAACACCAACATCGTGGGCTCTAAATGGGTGTTTCGTATTAAATATTTGCCTGATGGATCCGTTGAGCATTTCAAGGCTTGTCTTGTTGCCAAAGGTTATACTCAGGTTCCTGGTCTTGACTACACTGACACTTTCAGTCCGGTTGTCAAAGCTACCACTATCCGTGTTGTGCTTTTTATTGCAGTCACAAATAAATGGCCTCTTCGACAACTTGATGTCAAGAATGCTTTTCTCAATGGAACTCTTATTGAACGTGTTCATATGGAACAACCTCCTGAGTATATTGATCCTCGATTTCCCACTCATCAATCTAACATTATCTATTTGCTTCTTTATGTTGATGACATTATTGTTACCGACAACAACTCATCTCTTATTGACAGCTTTACTCGCAAGCTTCATTTTGAGTTTGCTACCAAAGATTTGGGTTCTCTAAGTTACTTTCTTGGTCTTGAAGCTTCACCCACTTCTGATGGTCTCTTTATTAGTCAGTTAAAATATGCTCGAGATATTCTTATTCGTGCTCAGTTGCTCGATAGCAAACCAGTTCACACTCCCATGGTTGTTTCTCAGCACCTGATTACTGATGGTTCTCCTTTCTCTGACCCTACTCTCTACAAATCTCTTGTTGGCGCCCTTCAATACTTGACTATTACGCGTCCAGATATTGCCTATGTTGTCAATTCTGTCAGTCAATTCCTGCATGCCCCTACTGCAGATCACTTTCTTGCTGTCAAACGTATTCTTCGCTATGTCAAAGGAACACTCCACTTTGGTCTTACCTTTCGTCCATCCACTATTCCTAGTACGCTAGTCGCTTATTCGGATGCTGACTGGGCTGGTTGTCCCGATACTCGTCGTTCTACATCCGGCTATTCTATTTATCTTGGTAACAATCTCGTTTCTTGGAGTGCCAAAAAGCAACCTACTGTCTCAAGCTCCAGCTGTGAATCTGAGTATCGTGCTCTTGCCACAACTGCTGCTGAACTTTTTTGGGTTACGCATCTTTTGCATGACCTCAAGATCCAAGCTTTACGTTCGTTTAAATCCGACGCTCAGCTTGCAGGGGGTGTCAAGGATAGTTGA

Coding sequence (CDS)

ATGACTGCCGACCCATCTATTCTAGATCAGTCTAAAAATTATACGGGTAAGGACTCTGTGATCGTAGGAAACGGTGCATCTCAACCCATTACCCACACCGGTTCCACTTTGCCACCCTCGACTTCTAATTCAACGTCTATTGAACCTCCTGTTGATTTCTCTTCTTTGGGCACTCATCCTATGATCACACGAGCCAAAACTGGTATATTCAAGACTCGTCATCCAGCAAATCTTGCTAAGAATCCTGCTTGGGTGGCTGCCATGGATGAAGAAATTCGAGTGTTACAACAAAATGATACTTGGACTTTGGTTCCTCGCCCTGCCAACACCAACATCGTGGGCTCTAAATGGGTGTTTCGTATTAAATATTTGCCTGATGGATCCGTTGAGCATTTCAAGGCTTGTCTTGTTGCCAAAGGTTATACTCAGGTTCCTGGTCTTGACTACACTGACACTTTCAGTCCGGTTGTCAAAGCTACCACTATCCGTGTTGTGCTTTTTATTGCAGTCACAAATAAATGGCCTCTTCGACAACTTGATGTCAAGAATGCTTTTCTCAATGGAACTCTTATTGAACGTGTTCATATGGAACAACCTCCTGAGTATATTGATCCTCGATTTCCCACTCATCAATCTAACATTATCTATTTGCTTCTTTATGTTGATGACATTATTGTTACCGACAACAACTCATCTCTTATTGACAGCTTTACTCGCAAGCTTCATTTTGAGTTTGCTACCAAAGATTTGGGTTCTCTAAGTTACTTTCTTGGTCTTGAAGCTTCACCCACTTCTGATGGTCTCTTTATTAGTCAGTTAAAATATGCTCGAGATATTCTTATTCGTGCTCAGTTGCTCGATAGCAAACCAGTTCACACTCCCATGGTTGTTTCTCAGCACCTGATTACTGATGGTTCTCCTTTCTCTGACCCTACTCTCTACAAATCTCTTGTTGGCGCCCTTCAATACTTGACTATTACGCGTCCAGATATTGCCTATGTTGTCAATTCTGTCAGTCAATTCCTGCATGCCCCTACTGCAGATCACTTTCTTGCTGTCAAACGTATTCTTCGCTATGTCAAAGGAACACTCCACTTTGGTCTTACCTTTCGTCCATCCACTATTCCTAGTACGCTAGTCGCTTATTCGGATGCTGACTGGGCTGGTTGTCCCGATACTCGTCGTTCTACATCCGGCTATTCTATTTATCTTGGTAACAATCTCGTTTCTTGGAGTGCCAAAAAGCAACCTACTGTCTCAAGCTCCAGCTGTGAATCTGAGTATCGTGCTCTTGCCACAACTGCTGCTGAACTTTTTTGGGTTACGCATCTTTTGCATGACCTCAAGATCCAAGCTTTACGTTCGTTTAAATCCGACGCTCAGCTTGCAGGGGGTGTCAAGGATAGTTGA

Protein sequence

MTADPSILDQSKNYTGKDSVIVGNGASQPITHTGSTLPPSTSNSTSIEPPVDFSSLGTHPMITRAKTGIFKTRHPANLAKNPAWVAAMDEEIRVLQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSVEHFKACLVAKGYTQVPGLDYTDTFSPVVKATTIRVVLFIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPEYIDPRFPTHQSNIIYLLLYVDDIIVTDNNSSLIDSFTRKLHFEFATKDLGSLSYFLGLEASPTSDGLFISQLKYARDILIRAQLLDSKPVHTPMVVSQHLITDGSPFSDPTLYKSLVGALQYLTITRPDIAYVVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTIPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSSSSCESEYRALATTAAELFWVTHLLHDLKIQALRSFKSDAQLAGGVKDS
BLAST of CmaCh06G009780 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.5e-59
Identity = 115/226 (50.88%), Postives = 159/226 (70.35%), Query Frame = 1

Query: 215 IYLLLYVDDIIVTDNNSSLIDSFTRKLHFEFATKDLGSLSYFLGLEASPTSDGLFISQLK 274
           +YLLLYVDDI++T ++++L++    +L   F+ KDLG + YFLG++      GLF+SQ K
Sbjct: 1   MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 275 YARDILIRAQLLDSKPVHTPMVVSQHLITDGSPFSDPTLYKSLVGALQYLTITRPDIAYV 334
           YA  IL  A +LD KP+ TP+ +  +     + + DP+ ++S+VGALQYLT+TRPDI+Y 
Sbjct: 61  YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 120

Query: 335 VNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTIPSTLVAYSDADWAGCPDTR 394
           VN V Q +H PT   F  +KR+LRYVKGT+  GL    ++    + A+ D+DWAGC  TR
Sbjct: 121 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNS-KLNVQAFCDSDWAGCTSTR 180

Query: 395 RSTSGYSIYLGNNLVSWSAKKQPTVSSSSCESEYRALATTAAELFW 441
           RST+G+  +LG N++SWSAK+QPTVS SS E+EYRALA TAAEL W
Sbjct: 181 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of CmaCh06G009780 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 144.1 bits (362), Expect = 4.0e-33
Identity = 78/242 (32.23%), Postives = 139/242 (57.44%), Query Frame = 1

Query: 215  IYLLLYVDDIIVTDNNSSLIDSFTRKLHFEFATKDLGSLSYFLGLEASPTSDGLFISQLK 274
            IY+LLYVDD+++   + + +++F R L  +F   DL  + +F+G+      D +++SQ  
Sbjct: 1082 IYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSA 1141

Query: 275  YARDILIRAQLLDSKPVHTPM--VVSQHLITDGSPFSDPTLYKSLVGALQYLTI-TRPDI 334
            Y + IL +  + +   V TP+   ++  L+      + P   +SL+G L Y+ + TRPD+
Sbjct: 1142 YVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTPC--RSLIGCLMYIMLCTRPDL 1201

Query: 335  AYVVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPS-TIPSTLVAYSDADWAGC 394
               VN +S++     ++ +  +KR+LRY+KGT+   L F+ +    + ++ Y D+DWAG 
Sbjct: 1202 TTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGS 1261

Query: 395  PDTRRSTSGYSIYLGN-NLVSWSAKKQPTVSSSSCESEYRALATTAAELFWVTHLLHDLK 452
               R+ST+GY   + + NL+ W+ K+Q +V++SS E+EY AL     E  W+  LL  + 
Sbjct: 1262 EIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSIN 1321

BLAST of CmaCh06G009780 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.2e-32
Identity = 93/248 (37.50%), Postives = 129/248 (52.02%), Query Frame = 1

Query: 211  QSNIIYLLLYVDDIIVTDNNSSLIDSFTRKLHFEFATKDLGSLSYFLGLEA--SPTSDGL 270
            ++N I LLLYVDD+++   +  LI      L   F  KDLG     LG++     TS  L
Sbjct: 999  ENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKL 1058

Query: 271  FISQLKYARDILIRAQLLDSKPVHTPMVVSQHLITDGSPFS-------DPTLYKSLVGAL 330
            ++SQ KY   +L R  + ++KPV TP+     L     P +           Y S VG+L
Sbjct: 1059 WLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSL 1118

Query: 331  QYLTI-TRPDIAYVVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTIPSTLV 390
             Y  + TRPDIA+ V  VS+FL  P  +H+ AVK ILRY++GT    L F  S     L 
Sbjct: 1119 MYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGS--DPILK 1178

Query: 391  AYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSSSSCESEYRALATTAAELFW 449
             Y+DAD AG  D R+S++GY        +SW +K Q  V+ S+ E+EY A   T  E+ W
Sbjct: 1179 GYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIW 1238

BLAST of CmaCh06G009780 vs. Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 8.4e-23
Identity = 77/228 (33.77%), Postives = 116/228 (50.88%), Query Frame = 1

Query: 215 IYLLLYVDDIIVTDNNSSLIDSFTRKLHFEFATKDLGSLSYFLGLEASPTSDG-LFISQL 274
           IY+ +YVDD++V   +  + D   ++L   ++ KDLG +  FLGL    +S+G + +S  
Sbjct: 82  IYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVDKFLGLNIHQSSNGDITLSLQ 141

Query: 275 KYARDILIRAQLLDSKPVHTPMVVSQHLITDGSP-FSDPTLYKSLVGALQYLTIT-RPDI 334
            Y       +++   K   TP+  S+ L    SP   D T Y+S+VG L +   T RPDI
Sbjct: 142 DYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDITPYQSIVGQLLFCANTGRPDI 201

Query: 335 AYVVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTIPSTLVAYSDADWAGCP 394
           +Y V+ +S+FL  P A H  + +R+LRY+  T    L +R S     L  Y DA      
Sbjct: 202 SYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKYR-SGSQLALTVYCDASHGAIH 261

Query: 395 DTRRSTSGYSIYLGNNLVSWSAKK-QPTVSSSSCESEYRALATTAAEL 439
           D   ST GY   L    V+WS+KK +  +   S E+EY   + T  E+
Sbjct: 262 DLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYITASETVMEI 308

BLAST of CmaCh06G009780 vs. Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 3.5e-21
Identity = 53/125 (42.40%), Postives = 72/125 (57.60%), Query Frame = 1

Query: 61  MITRAKTGIFKTRHPANLA----------------KNPAWVAAMDEEIRVLQQNDTWTLV 120
           M+TR+K GI K     +L                 K+P W  AM EE+  L +N TW LV
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 121 PRPANTNIVGSKWVFRIKYLPDGSVEHFKACLVAKGYTQVPGLDYTDTFSPVVKATTIRV 170
           P P N NI+G KWVF+ K   DG+++  KA LVAKG+ Q  G+ + +T+SPVV+  TIR 
Sbjct: 61  PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRT 120

BLAST of CmaCh06G009780 vs. TrEMBL
Match: A5C5R8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032383 PE=4 SV=1)

HSP 1 Score: 670.2 bits (1728), Expect = 1.8e-189
Identity = 359/503 (71.37%), Postives = 378/503 (75.15%), Query Frame = 1

Query: 28   QPITH----------TGSTLPPSTSNSTSIEPPVDFSS-LGTHPMITRAKTGIFKTRHPA 87
            QP+ H          TG +LPP  S+  SIE   D SS LG+HPMITRAK GIFKTRHPA
Sbjct: 628  QPVAHSTSWWLILLLTGFSLPPLASSPHSIEHAADSSSSLGSHPMITRAKAGIFKTRHPA 687

Query: 88   NL------------------------AKNPAWVAAMDEEIRVLQQNDTWTLVPRPANTNI 147
            NL                        AKNPAW+AAMDEE++ LQQN TW LVPRP NTNI
Sbjct: 688  NLGVLGSSGLLSALLSSTEPKGFKSAAKNPAWLAAMDEEVQALQQNGTWILVPRPVNTNI 747

Query: 148  VGSKWVFRIKYLPDGSVEHFKACLVAKGYTQVPGLDYTDTFSPVVKATTIRVVLFIAVTN 207
            VGSKWVFR KY PDGSVE  KA LVAKGYTQVPGLDYTDTFSPVVKATT+RVVL +AVTN
Sbjct: 748  VGSKWVFRTKYFPDGSVERLKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSLAVTN 807

Query: 208  KWPLRQLDVKNAFLNGTLIERVHME-------------------------QPPEYIDPRF 267
            KWPLRQLDVKNAFLNGTL E V+ME                         Q P     RF
Sbjct: 808  KWPLRQLDVKNAFLNGTLTEHVYMEQPPGYIDPRFPTHVCLLKKALYGLKQAPRAWFQRF 867

Query: 268  PT--------------------HQSNIIYLLLYVDDIIVTDNNSSLIDSFTRKLHFEFAT 327
             +                     QS++IYLLLYVDDIIVT NN SL+DSFTRKLH EFAT
Sbjct: 868  SSFLLTLGFSCSRADTSLFVFHQQSSLIYLLLYVDDIIVTGNNPSLLDSFTRKLHSEFAT 927

Query: 328  KDLGSLSYFLGLEASPTSDGLFISQLKYARDILIRAQLLDSKPVHTPMVVSQHLITDGSP 387
            KDLGSLSYFLGLEASPT DGLFISQLKYARDIL RAQLLDSKPVHTPMVVSQHL   GSP
Sbjct: 928  KDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTVAGSP 987

Query: 388  FSDPTLYKSLVGALQYLTITRPDIAYVVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFG 447
            FS+PTLY+SLVGALQYLTITRPDIA+ VNSVSQFLHAPT DHFLAVKRILRYVKGTLHFG
Sbjct: 988  FSNPTLYRSLVGALQYLTITRPDIAHAVNSVSQFLHAPTIDHFLAVKRILRYVKGTLHFG 1047

Query: 448  LTFRPSTIPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSSSSCESE 451
            LTFRPSTIPS LVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVS SSCESE
Sbjct: 1048 LTFRPSTIPSALVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESE 1107

BLAST of CmaCh06G009780 vs. TrEMBL
Match: A5AIQ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028253 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 5.6e-159
Identity = 304/465 (65.38%), Postives = 337/465 (72.47%), Query Frame = 1

Query: 20  VIVGNGASQPITHTGSTLPPSTSNSTSIEP----------PVDFSSLGTHPMITRAKTGI 79
           VI  +   + +  T S   PS+S   S+EP          P     LG+HPM+TRAK  I
Sbjct: 27  VIFPDPVDKSLQATDSLAGPSSS---SLEPHPPLVASDIAPTPAPPLGSHPMLTRAKASI 86

Query: 80  FKTRH---------------------PANL---AKNPAWVAAMDEEIRVLQQNDTWTLVP 139
           FKT H                     P      AKNPAW+A+MDEE++ LQ N TW LVP
Sbjct: 87  FKTHHPANLSVLSSSGFLSVLLASTEPKGFKSAAKNPAWLASMDEEVQALQHNRTWVLVP 146

Query: 140 RPANTNIVGSKWVFRIKYLPDGSVEHFKACLVAKGYTQVPGLDYTDTFSPVVKATTIRVV 199
           RPA+TNIVG KWVFR KYL DGS++ FKA LVAKGYTQVPGLDY DTFSPV+KATT+ VV
Sbjct: 147 RPAHTNIVGXKWVFRTKYLLDGSIDCFKAHLVAKGYTQVPGLDYIDTFSPVIKATTVHVV 206

Query: 200 LFIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPEYIDPRFPTHQSNIIYLLLYVDDII 259
           L + VTN+WPLRQLDVKNAFLNGTL E V++EQP  YIDPR+P H   +   L  +    
Sbjct: 207 LSLXVTNRWPLRQLDVKNAFLNGTLTENVYIEQPXGYIDPRYPNHVXQLKKALYGL---- 266

Query: 260 VTDNNSSLIDSFTRKLHFEFATKDLGSLSYFLGLEASPTSDGLFISQLKYARDILIRAQL 319
                 +    F RKL+FEFATKDLGSLSYFL LEA+ T+DGL ISQLKYARDIL  AQL
Sbjct: 267 ----KQAPRACFARKLNFEFATKDLGSLSYFLSLEATSTTDGLLISQLKYARDILNXAQL 326

Query: 320 LDSKPVHTPMVVSQHLITDGSPFSDPTLYKSLVGALQYLTITRPDIAYVVNSVSQFLHAP 379
           LDSKPVHTPM+VSQHL +DG  FSDPTLY+SLVG  QYLTIT PDIA+VVNSVSQFLHAP
Sbjct: 327 LDSKPVHTPMIVSQHLTSDGPAFSDPTLYRSLVGVFQYLTITCPDIAHVVNSVSQFLHAP 386

Query: 380 TADHFLAVKRILRYVKGTLHFGLTFRPSTIPSTLVAYSDADWAGCPDTRRSTSGYSIYLG 439
           T DHFLAVKRILRYVKGTLHFGLTFRPST P  LVAYSD DWAGC DTR STSGYSIYLG
Sbjct: 387 TMDHFLAVKRILRYVKGTLHFGLTFRPSTAPGALVAYSDTDWAGCLDTRHSTSGYSIYLG 446

Query: 440 NNLVSWSAKKQPTVSSSSCESEYRALATTAAELFWVTHLLHDLKI 451
           NNLVS SAKKQP VS SS ESEY ALA T  EL W+THLLHDLK+
Sbjct: 447 NNLVSSSAKKQPIVSHSSYESEYCALAATXVELLWLTHLLHDLKV 480

BLAST of CmaCh06G009780 vs. TrEMBL
Match: A5B6R5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036280 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 9.3e-154
Identity = 303/513 (59.06%), Postives = 354/513 (69.01%), Query Frame = 1

Query: 26  ASQPITHTGSTLPPSTSNSTSIEP-PVDFSSL------------------GTHPMITRAK 85
           A +P+    S+ P STS+S ++ P P   ++L                   +HPMITRAK
Sbjct: 190 AVEPL-QVSSSAPESTSSSAAVSPVPASATTLVPFAAPMDPIHTTTSAAPASHPMITRAK 249

Query: 86  TGIFKTRHPANL------------------------AKNPAWVAAMDEEIRVLQQNDTWT 145
           +GIFK RHPA+L                        AKNPAW+AAMD++I+ LQ N TW 
Sbjct: 250 SGIFKPRHPAHLSFVQSSPLIHALLATSEPKGFKSAAKNPAWLAAMDDKIKALQTNHTWD 309

Query: 146 LVPRPANTNIVGSKWVFRIKYLPDGSVEHFKACLVAKGYTQVPGLDYTDTFSPVVKATTI 205
           LVPRP+NTNIVGSKWVFR K+L  GS+E FKA LVAKGYTQ+PGLDY DTFSPVVKA+T+
Sbjct: 310 LVPRPSNTNIVGSKWVFRTKFLSYGSIERFKARLVAKGYTQLPGLDYKDTFSPVVKASTV 369

Query: 206 RVVLFIAVTNKWPLRQLDVKNAFLNGTLIERVHME------------------------- 265
           RVVL +AV++KWPLRQLDVKNAFLNG L E V+ME                         
Sbjct: 370 RVVLSLAVSHKWPLRQLDVKNAFLNGILHETVYMEQPLGYVDPRHPLHVCKLKKALYGLK 429

Query: 266 QPPEYIDPRFP--------------------THQSNIIYLLLYVDDIIVTDNNSSLIDSF 325
           Q P     RF                     T + ++IYLLLYVDDII+T NN +LI+ F
Sbjct: 430 QAPRAWFQRFSSFLLKLGFFCSRADTSLFVFTKKDDLIYLLLYVDDIILTGNNPALINRF 489

Query: 326 TRKLHFEFATKDLGSLSYFLGLEASPTSDGLFISQLKYARDILIRAQLLDSKPVHTPMVV 385
             +LH EFA KDLG LSYFLGLE S   DG F+SQ+KYA DIL RAQLLDSKPV TPM+V
Sbjct: 490 ISQLHSEFAVKDLGPLSYFLGLEVSYIPDGFFLSQVKYATDILARAQLLDSKPVPTPMIV 549

Query: 386 SQHLITDGSPFSDPTLYKSLVGALQYLTITRPDIAYVVNSVSQFLHAPTADHFLAVKRIL 445
           SQ L ++G+PF+DPTLY+SLVGALQYLTITRP++A+ +NSVSQFLHAPT  HF AVKRIL
Sbjct: 550 SQRLSSEGTPFADPTLYRSLVGALQYLTITRPNLAHSINSVSQFLHAPTEVHFQAVKRIL 609

Query: 446 RYVKGTLHFGLTFRPSTIPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQP 451
           RYV+GTLHFGL F  S     LVAYSDADWAGCPDTRRSTSGYSI+LGNNLVSWSAKKQP
Sbjct: 610 RYVQGTLHFGLKF-TSCSSMGLVAYSDADWAGCPDTRRSTSGYSIFLGNNLVSWSAKKQP 669

BLAST of CmaCh06G009780 vs. TrEMBL
Match: A5B2A6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009561 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 1.8e-149
Identity = 305/486 (62.76%), Postives = 328/486 (67.49%), Query Frame = 1

Query: 35   STLPPSTSNSTSIEPPVDFSS-LGTHPMITRAKTGIFKTRHPANL--------------- 94
            S+LPP  S+  SIE  VD SS LG+HPMITRAK GIFKTRHP NL               
Sbjct: 684  SSLPPLASSPHSIELDVDSSSSLGSHPMITRAKAGIFKTRHPVNLGVLGFSGLLSAFLAS 743

Query: 95   ---------AKNPAWVAAMDEEIRVLQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSV 154
                     AKNP W+AAMDEE++ LQQN TW LV RP NTNI                 
Sbjct: 744  TEPKGFKSAAKNPTWLAAMDEEVQALQQNGTWILVSRPVNTNI----------------- 803

Query: 155  EHFKACLVAKGYTQVPGLDYTDTFSPVVKATTIRVVLFIAVT------------------ 214
               KA LVAKGYTQV GLDYTDTFSPVVKATT+RVVL +AVT                  
Sbjct: 804  -RLKARLVAKGYTQVLGLDYTDTFSPVVKATTVRVVLSLAVTNKWPLRQLDVKNTFLNGT 863

Query: 215  ---------------NKWPLRQLDVKNAFLNGTLIERVHMEQPPEYI------DPRFPT- 274
                           +++P     +K A        R   ++   +         R  T 
Sbjct: 864  LTEHVYMEQPPGYIDSRFPTHVCLLKKALYGLKQAPRAWFQRFSSFFLTLGFSSSRVDTS 923

Query: 275  -----HQSNIIYLLLYVDDIIVTDNNSSLIDSFTRKLHFEFATKDLGSLSYFLGLEASPT 334
                  QS++IYLLLYVDDIIVT NN SL+DSFT KLH EFATKDLGSLSYFLGLEASPT
Sbjct: 924  LFVFHQQSSLIYLLLYVDDIIVTGNNPSLLDSFTCKLHSEFATKDLGSLSYFLGLEASPT 983

Query: 335  SDGLFISQLKYARDILIRAQLLDSKPVHTPMVVSQHLITDGSPFSDPTLYKSLVGALQYL 394
             DGLFI QLKYARDIL   QLLDSKPVHTPMVVSQHL   G PFS+PTLY+SLVG LQYL
Sbjct: 984  PDGLFIGQLKYARDILTLTQLLDSKPVHTPMVVSQHLTVAGFPFSNPTLYRSLVGXLQYL 1043

Query: 395  TITRPDIAYVVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTIPSTLVAYSD 451
             ITR DIA+ VNSVSQFLHAPT DHFLAVKRILRYVKGTLHFGLTF PSTIPS LVAYSD
Sbjct: 1044 PITRLDIAHAVNSVSQFLHAPTIDHFLAVKRILRYVKGTLHFGLTFCPSTIPSALVAYSD 1103

BLAST of CmaCh06G009780 vs. TrEMBL
Match: A5BNR9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009255 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 6.0e-145
Identity = 288/496 (58.06%), Postives = 336/496 (67.74%), Query Frame = 1

Query: 24  NGASQPITHTGSTLPPSTSNSTSIEPPVDFSSLGTHPMITRAKTGIFKTRHPANL----- 83
           + A  P++ + +TL P  +    I      ++  +HPMITRAK+GIFK +HP +L     
Sbjct: 510 SAAVSPVSASATTLVPFAAPMDPIHTTTS-AAPASHPMITRAKSGIFKPQHPVHLSFVQS 569

Query: 84  -------------------AKNPAWVAAMDEEIRVLQQNDTWTLVPRPANTNIVGSKWVF 143
                              AKNPAW+A MD+EI+ LQ N TW LVPRP+NTNIVGSKWVF
Sbjct: 570 SPLIHALLATFEPKGFKSAAKNPAWLATMDDEIKALQTNHTWDLVPRPSNTNIVGSKWVF 629

Query: 144 RIKYLPDGSVEHFKACLVAKGYTQVPGLDYTDTFSPVVKATTIRVVLFIAVTNKWPLRQL 203
           R K+L DGS+E FKA LVAKGYTQ+PGLDY DTFSPVVKA+T+RVVL +AV++KWPLRQL
Sbjct: 630 RTKFLSDGSIERFKARLVAKGYTQLPGLDYKDTFSPVVKASTVRVVLSLAVSHKWPLRQL 689

Query: 204 DVKNAFLNGTLIERVHME-------------------------QPPEYIDPRFP------ 263
           DVKN FLNG L E V+ME                         Q P     RF       
Sbjct: 690 DVKNVFLNGILHETVYMEQPPGYVDPRHPLHVCKLKKALYGLKQAPRAWFQRFSSFLLKL 749

Query: 264 --------------THQSNIIYLLLYVDDIIVTDNNSSLIDSFTRKLHFEFATKDLGSLS 323
                         T + ++IYLLLYVD+II+T NN +LI+ F  +LH EFA KDLG LS
Sbjct: 750 GFFCNCADTSLFVFTKKDDLIYLLLYVDNIILTGNNPALINQFISQLHSEFAVKDLGPLS 809

Query: 324 YFLGLEASPTSDGLFISQLKYARDILIRAQLLDSKPVHTPMVVSQHLITDGSPFSDPTLY 383
           YFLGLE S   DG F+SQ+KYA DIL RAQLLDSKPV TPM+VSQ L ++G+PF+DPTLY
Sbjct: 810 YFLGLEVSYIPDGFFLSQVKYATDILARAQLLDSKPVTTPMIVSQRLSSEGTPFADPTLY 869

Query: 384 KSLVGALQYLTITRPDIAYVVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPST 443
           +SLVGALQYLTITRPDIA+ VNS              AVKRILRYV+GTLHFGL F  S 
Sbjct: 870 RSLVGALQYLTITRPDIAHSVNS--------------AVKRILRYVQGTLHFGLKF-TSC 929

Query: 444 IPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSSSSCESEYRALATT 451
               LVAYSDADWAGCPDTRRSTSGYSI+LGNNLVSWSAKKQPTVS SSCESEYRALA T
Sbjct: 930 SSMGLVAYSDADWAGCPDTRRSTSGYSIFLGNNLVSWSAKKQPTVSRSSCESEYRALALT 989

BLAST of CmaCh06G009780 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 229.9 bits (585), Expect = 3.1e-60
Identity = 115/226 (50.88%), Postives = 159/226 (70.35%), Query Frame = 1

Query: 215 IYLLLYVDDIIVTDNNSSLIDSFTRKLHFEFATKDLGSLSYFLGLEASPTSDGLFISQLK 274
           +YLLLYVDDI++T ++++L++    +L   F+ KDLG + YFLG++      GLF+SQ K
Sbjct: 1   MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 275 YARDILIRAQLLDSKPVHTPMVVSQHLITDGSPFSDPTLYKSLVGALQYLTITRPDIAYV 334
           YA  IL  A +LD KP+ TP+ +  +     + + DP+ ++S+VGALQYLT+TRPDI+Y 
Sbjct: 61  YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 120

Query: 335 VNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTIPSTLVAYSDADWAGCPDTR 394
           VN V Q +H PT   F  +KR+LRYVKGT+  GL    ++    + A+ D+DWAGC  TR
Sbjct: 121 VNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNS-KLNVQAFCDSDWAGCTSTR 180

Query: 395 RSTSGYSIYLGNNLVSWSAKKQPTVSSSSCESEYRALATTAAELFW 441
           RST+G+  +LG N++SWSAK+QPTVS SS E+EYRALA TAAEL W
Sbjct: 181 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of CmaCh06G009780 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 192.6 bits (488), Expect = 5.5e-49
Identity = 105/235 (44.68%), Postives = 140/235 (59.57%), Query Frame = 1

Query: 217 LLLYVDDIIVTDNNSSLIDSFTRKLHFEFATKDLGSLSYFLGLEASPTSDGLFISQLKYA 276
           +L+YVDDII+  NN + +D    +L   F  +DLG L YFLGLE + ++ G+ I Q KYA
Sbjct: 280 VLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYA 339

Query: 277 RDILIRAQLLDSKPVHTPMVVSQHLIT-DGSPFSDPTLYKSLVGALQYLTITRPDIAYVV 336
            D+L    LL  KP   PM  S       G  F D   Y+ L+G L YL ITR DI++ V
Sbjct: 340 LDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAV 399

Query: 337 NSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTIPSTLVAYSDADWAGCPDTRR 396
           N +SQF  AP   H  AV +IL Y+KGT+  GL F  S     L  +SDA +  C DTRR
Sbjct: 400 NKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL-FYSSQAEMQLQVFSDASFQSCKDTRR 459

Query: 397 STSGYSIYLGNNLVSWSAKKQPTVSSSSCESEYRALATTAAELFWVTHLLHDLKI 451
           ST+GY ++LG +L+SW +KKQ  VS SS E+EYRAL+    E+ W+     +L++
Sbjct: 460 STNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQL 513

BLAST of CmaCh06G009780 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 104.4 bits (259), Expect = 2.0e-22
Identity = 53/125 (42.40%), Postives = 72/125 (57.60%), Query Frame = 1

Query: 61  MITRAKTGIFKTRHPANLA----------------KNPAWVAAMDEEIRVLQQNDTWTLV 120
           M+TR+K GI K     +L                 K+P W  AM EE+  L +N TW LV
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 121 PRPANTNIVGSKWVFRIKYLPDGSVEHFKACLVAKGYTQVPGLDYTDTFSPVVKATTIRV 170
           P P N NI+G KWVF+ K   DG+++  KA LVAKG+ Q  G+ + +T+SPVV+  TIR 
Sbjct: 61  PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRT 120

BLAST of CmaCh06G009780 vs. TAIR10
Match: ATMG00240.1 (ATMG00240.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 80.5 bits (197), Expect = 3.1e-15
Identity = 40/78 (51.28%), Postives = 52/78 (66.67%), Query Frame = 1

Query: 323 YLTITRPDIAYVVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTIPSTLVAY 382
           YLTITRPD+ + VN +SQF  A       AV ++L YVKGT+  GL F  +T    L A+
Sbjct: 2   YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGL-FYSATSDLQLKAF 61

Query: 383 SDADWAGCPDTRRSTSGY 401
           +D+DWA CPDTRRS +G+
Sbjct: 62  ADSDWASCPDTRRSVTGF 78

BLAST of CmaCh06G009780 vs. NCBI nr
Match: gi|147785835|emb|CAN73071.1| (hypothetical protein VITISV_032383 [Vitis vinifera])

HSP 1 Score: 670.2 bits (1728), Expect = 2.6e-189
Identity = 359/503 (71.37%), Postives = 378/503 (75.15%), Query Frame = 1

Query: 28   QPITH----------TGSTLPPSTSNSTSIEPPVDFSS-LGTHPMITRAKTGIFKTRHPA 87
            QP+ H          TG +LPP  S+  SIE   D SS LG+HPMITRAK GIFKTRHPA
Sbjct: 628  QPVAHSTSWWLILLLTGFSLPPLASSPHSIEHAADSSSSLGSHPMITRAKAGIFKTRHPA 687

Query: 88   NL------------------------AKNPAWVAAMDEEIRVLQQNDTWTLVPRPANTNI 147
            NL                        AKNPAW+AAMDEE++ LQQN TW LVPRP NTNI
Sbjct: 688  NLGVLGSSGLLSALLSSTEPKGFKSAAKNPAWLAAMDEEVQALQQNGTWILVPRPVNTNI 747

Query: 148  VGSKWVFRIKYLPDGSVEHFKACLVAKGYTQVPGLDYTDTFSPVVKATTIRVVLFIAVTN 207
            VGSKWVFR KY PDGSVE  KA LVAKGYTQVPGLDYTDTFSPVVKATT+RVVL +AVTN
Sbjct: 748  VGSKWVFRTKYFPDGSVERLKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSLAVTN 807

Query: 208  KWPLRQLDVKNAFLNGTLIERVHME-------------------------QPPEYIDPRF 267
            KWPLRQLDVKNAFLNGTL E V+ME                         Q P     RF
Sbjct: 808  KWPLRQLDVKNAFLNGTLTEHVYMEQPPGYIDPRFPTHVCLLKKALYGLKQAPRAWFQRF 867

Query: 268  PT--------------------HQSNIIYLLLYVDDIIVTDNNSSLIDSFTRKLHFEFAT 327
             +                     QS++IYLLLYVDDIIVT NN SL+DSFTRKLH EFAT
Sbjct: 868  SSFLLTLGFSCSRADTSLFVFHQQSSLIYLLLYVDDIIVTGNNPSLLDSFTRKLHSEFAT 927

Query: 328  KDLGSLSYFLGLEASPTSDGLFISQLKYARDILIRAQLLDSKPVHTPMVVSQHLITDGSP 387
            KDLGSLSYFLGLEASPT DGLFISQLKYARDIL RAQLLDSKPVHTPMVVSQHL   GSP
Sbjct: 928  KDLGSLSYFLGLEASPTPDGLFISQLKYARDILTRAQLLDSKPVHTPMVVSQHLTVAGSP 987

Query: 388  FSDPTLYKSLVGALQYLTITRPDIAYVVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFG 447
            FS+PTLY+SLVGALQYLTITRPDIA+ VNSVSQFLHAPT DHFLAVKRILRYVKGTLHFG
Sbjct: 988  FSNPTLYRSLVGALQYLTITRPDIAHAVNSVSQFLHAPTIDHFLAVKRILRYVKGTLHFG 1047

Query: 448  LTFRPSTIPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSSSSCESE 451
            LTFRPSTIPS LVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVS SSCESE
Sbjct: 1048 LTFRPSTIPSALVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSRSSCESE 1107

BLAST of CmaCh06G009780 vs. NCBI nr
Match: gi|147774759|emb|CAN60276.1| (hypothetical protein VITISV_028253 [Vitis vinifera])

HSP 1 Score: 568.9 bits (1465), Expect = 8.0e-159
Identity = 304/465 (65.38%), Postives = 337/465 (72.47%), Query Frame = 1

Query: 20  VIVGNGASQPITHTGSTLPPSTSNSTSIEP----------PVDFSSLGTHPMITRAKTGI 79
           VI  +   + +  T S   PS+S   S+EP          P     LG+HPM+TRAK  I
Sbjct: 27  VIFPDPVDKSLQATDSLAGPSSS---SLEPHPPLVASDIAPTPAPPLGSHPMLTRAKASI 86

Query: 80  FKTRH---------------------PANL---AKNPAWVAAMDEEIRVLQQNDTWTLVP 139
           FKT H                     P      AKNPAW+A+MDEE++ LQ N TW LVP
Sbjct: 87  FKTHHPANLSVLSSSGFLSVLLASTEPKGFKSAAKNPAWLASMDEEVQALQHNRTWVLVP 146

Query: 140 RPANTNIVGSKWVFRIKYLPDGSVEHFKACLVAKGYTQVPGLDYTDTFSPVVKATTIRVV 199
           RPA+TNIVG KWVFR KYL DGS++ FKA LVAKGYTQVPGLDY DTFSPV+KATT+ VV
Sbjct: 147 RPAHTNIVGXKWVFRTKYLLDGSIDCFKAHLVAKGYTQVPGLDYIDTFSPVIKATTVHVV 206

Query: 200 LFIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPEYIDPRFPTHQSNIIYLLLYVDDII 259
           L + VTN+WPLRQLDVKNAFLNGTL E V++EQP  YIDPR+P H   +   L  +    
Sbjct: 207 LSLXVTNRWPLRQLDVKNAFLNGTLTENVYIEQPXGYIDPRYPNHVXQLKKALYGL---- 266

Query: 260 VTDNNSSLIDSFTRKLHFEFATKDLGSLSYFLGLEASPTSDGLFISQLKYARDILIRAQL 319
                 +    F RKL+FEFATKDLGSLSYFL LEA+ T+DGL ISQLKYARDIL  AQL
Sbjct: 267 ----KQAPRACFARKLNFEFATKDLGSLSYFLSLEATSTTDGLLISQLKYARDILNXAQL 326

Query: 320 LDSKPVHTPMVVSQHLITDGSPFSDPTLYKSLVGALQYLTITRPDIAYVVNSVSQFLHAP 379
           LDSKPVHTPM+VSQHL +DG  FSDPTLY+SLVG  QYLTIT PDIA+VVNSVSQFLHAP
Sbjct: 327 LDSKPVHTPMIVSQHLTSDGPAFSDPTLYRSLVGVFQYLTITCPDIAHVVNSVSQFLHAP 386

Query: 380 TADHFLAVKRILRYVKGTLHFGLTFRPSTIPSTLVAYSDADWAGCPDTRRSTSGYSIYLG 439
           T DHFLAVKRILRYVKGTLHFGLTFRPST P  LVAYSD DWAGC DTR STSGYSIYLG
Sbjct: 387 TMDHFLAVKRILRYVKGTLHFGLTFRPSTAPGALVAYSDTDWAGCLDTRHSTSGYSIYLG 446

Query: 440 NNLVSWSAKKQPTVSSSSCESEYRALATTAAELFWVTHLLHDLKI 451
           NNLVS SAKKQP VS SS ESEY ALA T  EL W+THLLHDLK+
Sbjct: 447 NNLVSSSAKKQPIVSHSSYESEYCALAATXVELLWLTHLLHDLKV 480

BLAST of CmaCh06G009780 vs. NCBI nr
Match: gi|147788621|emb|CAN67588.1| (hypothetical protein VITISV_036280 [Vitis vinifera])

HSP 1 Score: 551.6 bits (1420), Expect = 1.3e-153
Identity = 303/513 (59.06%), Postives = 354/513 (69.01%), Query Frame = 1

Query: 26  ASQPITHTGSTLPPSTSNSTSIEP-PVDFSSL------------------GTHPMITRAK 85
           A +P+    S+ P STS+S ++ P P   ++L                   +HPMITRAK
Sbjct: 190 AVEPL-QVSSSAPESTSSSAAVSPVPASATTLVPFAAPMDPIHTTTSAAPASHPMITRAK 249

Query: 86  TGIFKTRHPANL------------------------AKNPAWVAAMDEEIRVLQQNDTWT 145
           +GIFK RHPA+L                        AKNPAW+AAMD++I+ LQ N TW 
Sbjct: 250 SGIFKPRHPAHLSFVQSSPLIHALLATSEPKGFKSAAKNPAWLAAMDDKIKALQTNHTWD 309

Query: 146 LVPRPANTNIVGSKWVFRIKYLPDGSVEHFKACLVAKGYTQVPGLDYTDTFSPVVKATTI 205
           LVPRP+NTNIVGSKWVFR K+L  GS+E FKA LVAKGYTQ+PGLDY DTFSPVVKA+T+
Sbjct: 310 LVPRPSNTNIVGSKWVFRTKFLSYGSIERFKARLVAKGYTQLPGLDYKDTFSPVVKASTV 369

Query: 206 RVVLFIAVTNKWPLRQLDVKNAFLNGTLIERVHME------------------------- 265
           RVVL +AV++KWPLRQLDVKNAFLNG L E V+ME                         
Sbjct: 370 RVVLSLAVSHKWPLRQLDVKNAFLNGILHETVYMEQPLGYVDPRHPLHVCKLKKALYGLK 429

Query: 266 QPPEYIDPRFP--------------------THQSNIIYLLLYVDDIIVTDNNSSLIDSF 325
           Q P     RF                     T + ++IYLLLYVDDII+T NN +LI+ F
Sbjct: 430 QAPRAWFQRFSSFLLKLGFFCSRADTSLFVFTKKDDLIYLLLYVDDIILTGNNPALINRF 489

Query: 326 TRKLHFEFATKDLGSLSYFLGLEASPTSDGLFISQLKYARDILIRAQLLDSKPVHTPMVV 385
             +LH EFA KDLG LSYFLGLE S   DG F+SQ+KYA DIL RAQLLDSKPV TPM+V
Sbjct: 490 ISQLHSEFAVKDLGPLSYFLGLEVSYIPDGFFLSQVKYATDILARAQLLDSKPVPTPMIV 549

Query: 386 SQHLITDGSPFSDPTLYKSLVGALQYLTITRPDIAYVVNSVSQFLHAPTADHFLAVKRIL 445
           SQ L ++G+PF+DPTLY+SLVGALQYLTITRP++A+ +NSVSQFLHAPT  HF AVKRIL
Sbjct: 550 SQRLSSEGTPFADPTLYRSLVGALQYLTITRPNLAHSINSVSQFLHAPTEVHFQAVKRIL 609

Query: 446 RYVKGTLHFGLTFRPSTIPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQP 451
           RYV+GTLHFGL F  S     LVAYSDADWAGCPDTRRSTSGYSI+LGNNLVSWSAKKQP
Sbjct: 610 RYVQGTLHFGLKF-TSCSSMGLVAYSDADWAGCPDTRRSTSGYSIFLGNNLVSWSAKKQP 669

BLAST of CmaCh06G009780 vs. NCBI nr
Match: gi|147797902|emb|CAN69607.1| (hypothetical protein VITISV_009561 [Vitis vinifera])

HSP 1 Score: 537.3 bits (1383), Expect = 2.6e-149
Identity = 305/486 (62.76%), Postives = 328/486 (67.49%), Query Frame = 1

Query: 35   STLPPSTSNSTSIEPPVDFSS-LGTHPMITRAKTGIFKTRHPANL--------------- 94
            S+LPP  S+  SIE  VD SS LG+HPMITRAK GIFKTRHP NL               
Sbjct: 684  SSLPPLASSPHSIELDVDSSSSLGSHPMITRAKAGIFKTRHPVNLGVLGFSGLLSAFLAS 743

Query: 95   ---------AKNPAWVAAMDEEIRVLQQNDTWTLVPRPANTNIVGSKWVFRIKYLPDGSV 154
                     AKNP W+AAMDEE++ LQQN TW LV RP NTNI                 
Sbjct: 744  TEPKGFKSAAKNPTWLAAMDEEVQALQQNGTWILVSRPVNTNI----------------- 803

Query: 155  EHFKACLVAKGYTQVPGLDYTDTFSPVVKATTIRVVLFIAVT------------------ 214
               KA LVAKGYTQV GLDYTDTFSPVVKATT+RVVL +AVT                  
Sbjct: 804  -RLKARLVAKGYTQVLGLDYTDTFSPVVKATTVRVVLSLAVTNKWPLRQLDVKNTFLNGT 863

Query: 215  ---------------NKWPLRQLDVKNAFLNGTLIERVHMEQPPEYI------DPRFPT- 274
                           +++P     +K A        R   ++   +         R  T 
Sbjct: 864  LTEHVYMEQPPGYIDSRFPTHVCLLKKALYGLKQAPRAWFQRFSSFFLTLGFSSSRVDTS 923

Query: 275  -----HQSNIIYLLLYVDDIIVTDNNSSLIDSFTRKLHFEFATKDLGSLSYFLGLEASPT 334
                  QS++IYLLLYVDDIIVT NN SL+DSFT KLH EFATKDLGSLSYFLGLEASPT
Sbjct: 924  LFVFHQQSSLIYLLLYVDDIIVTGNNPSLLDSFTCKLHSEFATKDLGSLSYFLGLEASPT 983

Query: 335  SDGLFISQLKYARDILIRAQLLDSKPVHTPMVVSQHLITDGSPFSDPTLYKSLVGALQYL 394
             DGLFI QLKYARDIL   QLLDSKPVHTPMVVSQHL   G PFS+PTLY+SLVG LQYL
Sbjct: 984  PDGLFIGQLKYARDILTLTQLLDSKPVHTPMVVSQHLTVAGFPFSNPTLYRSLVGXLQYL 1043

Query: 395  TITRPDIAYVVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPSTIPSTLVAYSD 451
             ITR DIA+ VNSVSQFLHAPT DHFLAVKRILRYVKGTLHFGLTF PSTIPS LVAYSD
Sbjct: 1044 PITRLDIAHAVNSVSQFLHAPTIDHFLAVKRILRYVKGTLHFGLTFCPSTIPSALVAYSD 1103

BLAST of CmaCh06G009780 vs. NCBI nr
Match: gi|147783602|emb|CAN72527.1| (hypothetical protein VITISV_009255 [Vitis vinifera])

HSP 1 Score: 522.3 bits (1344), Expect = 8.6e-145
Identity = 288/496 (58.06%), Postives = 336/496 (67.74%), Query Frame = 1

Query: 24  NGASQPITHTGSTLPPSTSNSTSIEPPVDFSSLGTHPMITRAKTGIFKTRHPANL----- 83
           + A  P++ + +TL P  +    I      ++  +HPMITRAK+GIFK +HP +L     
Sbjct: 510 SAAVSPVSASATTLVPFAAPMDPIHTTTS-AAPASHPMITRAKSGIFKPQHPVHLSFVQS 569

Query: 84  -------------------AKNPAWVAAMDEEIRVLQQNDTWTLVPRPANTNIVGSKWVF 143
                              AKNPAW+A MD+EI+ LQ N TW LVPRP+NTNIVGSKWVF
Sbjct: 570 SPLIHALLATFEPKGFKSAAKNPAWLATMDDEIKALQTNHTWDLVPRPSNTNIVGSKWVF 629

Query: 144 RIKYLPDGSVEHFKACLVAKGYTQVPGLDYTDTFSPVVKATTIRVVLFIAVTNKWPLRQL 203
           R K+L DGS+E FKA LVAKGYTQ+PGLDY DTFSPVVKA+T+RVVL +AV++KWPLRQL
Sbjct: 630 RTKFLSDGSIERFKARLVAKGYTQLPGLDYKDTFSPVVKASTVRVVLSLAVSHKWPLRQL 689

Query: 204 DVKNAFLNGTLIERVHME-------------------------QPPEYIDPRFP------ 263
           DVKN FLNG L E V+ME                         Q P     RF       
Sbjct: 690 DVKNVFLNGILHETVYMEQPPGYVDPRHPLHVCKLKKALYGLKQAPRAWFQRFSSFLLKL 749

Query: 264 --------------THQSNIIYLLLYVDDIIVTDNNSSLIDSFTRKLHFEFATKDLGSLS 323
                         T + ++IYLLLYVD+II+T NN +LI+ F  +LH EFA KDLG LS
Sbjct: 750 GFFCNCADTSLFVFTKKDDLIYLLLYVDNIILTGNNPALINQFISQLHSEFAVKDLGPLS 809

Query: 324 YFLGLEASPTSDGLFISQLKYARDILIRAQLLDSKPVHTPMVVSQHLITDGSPFSDPTLY 383
           YFLGLE S   DG F+SQ+KYA DIL RAQLLDSKPV TPM+VSQ L ++G+PF+DPTLY
Sbjct: 810 YFLGLEVSYIPDGFFLSQVKYATDILARAQLLDSKPVTTPMIVSQRLSSEGTPFADPTLY 869

Query: 384 KSLVGALQYLTITRPDIAYVVNSVSQFLHAPTADHFLAVKRILRYVKGTLHFGLTFRPST 443
           +SLVGALQYLTITRPDIA+ VNS              AVKRILRYV+GTLHFGL F  S 
Sbjct: 870 RSLVGALQYLTITRPDIAHSVNS--------------AVKRILRYVQGTLHFGLKF-TSC 929

Query: 444 IPSTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLVSWSAKKQPTVSSSSCESEYRALATT 451
               LVAYSDADWAGCPDTRRSTSGYSI+LGNNLVSWSAKKQPTVS SSCESEYRALA T
Sbjct: 930 SSMGLVAYSDADWAGCPDTRRSTSGYSIFLGNNLVSWSAKKQPTVSRSSCESEYRALALT 989

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
M810_ARATH5.5e-5950.88Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg0... [more]
COPIA_DROME4.0e-3332.23Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3[more]
POLX_TOBAC1.2e-3237.50Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
YCH4_YEAST8.4e-2333.77Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
M820_ARATH3.5e-2142.40Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg0... [more]
Match NameE-valueIdentityDescription
A5C5R8_VITVI1.8e-18971.37Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032383 PE=4 SV=1[more]
A5AIQ8_VITVI5.6e-15965.38Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028253 PE=4 SV=1[more]
A5B6R5_VITVI9.3e-15459.06Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036280 PE=4 SV=1[more]
A5B2A6_VITVI1.8e-14962.76Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009561 PE=4 SV=1[more]
A5BNR9_VITVI6.0e-14558.06Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009255 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
ATMG00810.13.1e-6050.88ATMG00810.1 DNA/RNA polymerases superfamily protein[more]
AT4G23160.15.5e-4944.68 cysteine-rich RLK (RECEPTOR-like protein kinase) 8[more]
ATMG00820.12.0e-2242.40ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)[more]
ATMG00240.13.1e-1551.28ATMG00240.1 Gag-Pol-related retrotransposon family protein[more]
Match NameE-valueIdentityDescription
gi|147785835|emb|CAN73071.1|2.6e-18971.37hypothetical protein VITISV_032383 [Vitis vinifera][more]
gi|147774759|emb|CAN60276.1|8.0e-15965.38hypothetical protein VITISV_028253 [Vitis vinifera][more]
gi|147788621|emb|CAN67588.1|1.3e-15359.06hypothetical protein VITISV_036280 [Vitis vinifera][more]
gi|147797902|emb|CAN69607.1|2.6e-14962.76hypothetical protein VITISV_009561 [Vitis vinifera][more]
gi|147783602|emb|CAN72527.1|8.6e-14558.06hypothetical protein VITISV_009255 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044267 cellular protein metabolic process
biological_process GO:0015074 DNA integration
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0003824 catalytic activity
molecular_function GO:0043167 ion binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G009780.1CmaCh06G009780.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 210..296
score: 6.7E-21coord: 98..207
score: 6.7
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 79..455
score: 2.5E
NoneNo IPR availablePANTHERPTHR11439:SF185SUBFAMILY NOT NAMEDcoord: 79..455
score: 2.5E
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 98..275
score: 2.09E-19coord: 304..451
score: 2.09

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh06G009780Cucumber (Chinese Long) v3cmacucB0965
CmaCh06G009780Cucumber (Chinese Long) v3cmacucB0980
CmaCh06G009780Watermelon (97103) v2cmawmbB857
CmaCh06G009780Watermelon (97103) v2cmawmbB862
CmaCh06G009780Wax gourdcmawgoB1011
CmaCh06G009780Cucurbita maxima (Rimu)cmacmaB023
CmaCh06G009780Cucurbita maxima (Rimu)cmacmaB281
CmaCh06G009780Cucumber (Gy14) v1cgycmaB0725
CmaCh06G009780Cucumber (Gy14) v1cgycmaB0728
CmaCh06G009780Cucurbita moschata (Rifu)cmacmoB795
CmaCh06G009780Cucurbita moschata (Rifu)cmacmoB799
CmaCh06G009780Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G009780Cucurbita moschata (Rifu)cmacmoB832
CmaCh06G009780Wild cucumber (PI 183967)cmacpiB830
CmaCh06G009780Wild cucumber (PI 183967)cmacpiB843
CmaCh06G009780Cucumber (Chinese Long) v2cmacuB818
CmaCh06G009780Cucumber (Chinese Long) v2cmacuB830
CmaCh06G009780Melon (DHL92) v3.5.1cmameB766
CmaCh06G009780Melon (DHL92) v3.5.1cmameB771
CmaCh06G009780Watermelon (Charleston Gray)cmawcgB738
CmaCh06G009780Watermelon (Charleston Gray)cmawcgB742
CmaCh06G009780Watermelon (97103) v1cmawmB803
CmaCh06G009780Watermelon (97103) v1cmawmB799
CmaCh06G009780Cucurbita pepo (Zucchini)cmacpeB834
CmaCh06G009780Cucurbita pepo (Zucchini)cmacpeB839
CmaCh06G009780Cucurbita pepo (Zucchini)cmacpeB848
CmaCh06G009780Bottle gourd (USVL1VR-Ls)cmalsiB760
CmaCh06G009780Cucumber (Gy14) v2cgybcmaB430
CmaCh06G009780Cucumber (Gy14) v2cgybcmaB443
CmaCh06G009780Melon (DHL92) v3.6.1cmamedB863
CmaCh06G009780Melon (DHL92) v3.6.1cmamedB873
CmaCh06G009780Silver-seed gourdcarcmaB0163
CmaCh06G009780Silver-seed gourdcarcmaB0176
CmaCh06G009780Silver-seed gourdcarcmaB0177
CmaCh06G009780Silver-seed gourdcarcmaB1376