CmaCh06G009270 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCCCTTGACAACTTAAGCACCTCACCCCACCCAGTCAATGCAAGTCCTCCTTGCTTCTGCTCCTGCTCCTGCTCCTGCTCCGTTGTTATAGTTATAAACATCCACCACCAACTCCGACGCCCTTCCTACCAAATCCATGGCCACCACCGCTGAATTTTCGTATCTTTCTTCATTGCCGGCTGGTTTTGTTTTCCGTCCCACGGAGGAGCAGCTCATTACCCACTACCTGAAGAACAAGAATGATGGCAACGAGTCTGTTGTTAGTTTTATCAAGGAGATTGATCTGTACAAGTTCGAACCCGAGCAACTCCCAGGTATGTATTTATCAAATTCCTGATTTTAGCTTTTGAAGATGGAGCACACCTCTGATTCTTTCCTTTCCCTTGTTCCTGTGCAGACAAATCGTTCATCCCGTCTGATAATTTCGAGTGGTTTTTCTTCCGGGCCAACACCTTGGACATTGAAAGAACCACGGGTACTGGCAGCTGGAAATCCACCGGTGAACCCCGCCCAATCAAGGCTCGAGGAACCAATGAAGTGATCGGAAGTAGACAAATCTTCGTGTTCCATCGAGGGCGGGGAGCCAAGGGTGTAAAGACCAATTGGGTGATACGCGAGTATAGGCTTCACCCAGACACTAAAATCCCTTCCCAGGTCTCATTTCCCACGCTTCTTTTATTCCCAATATGATGAGTATTTTTAAGTAATGAGGTTTTTGTGGTAACATTGTCCCTCTTATGTACTGCTGCCCATGTAGCACCCATTCCTCATTTTTAAATTGAAGGATAACAATGCAGATGGAGAGAAGAAAATCATACAGAAGGTAAGAGTGTCCAATATGAACATTTTGAACATAACCTTGTATGCTGAGCTTGAGATGACCTCCTTAATTTTTAACAGCCTCGAGCTGGAACTTCTGAAAATCCAGATAATGCCATACAGAGTGAATGTGATTTTGAAAAGCAAATTATGGAATCGGTGTTAGGCAAGCATAAAAACTTGGACGAGATGACATCAAACAACCACGAGGAATCGGAGGAATCGGATGACACTTATTCTGATGTACTGACTAAAAATTATTTGATTGAATTGTTTTGCAGTGATGGGTAATTCGAAGGTTGCACCCACACAGTTTCTCATCCTTTGCTCTTCTTTTCTCACATATTTTTACTTGTCAATTCCAGAACCAAATAAAATACTTGCGTAGAGTACTCAGACGTGTAAAGGTATACGAAGAAAGTAAACCACAAAACGCCCCATTGCCGAGGAAACCCGGAAGTACAAATGTGTCCCCATCCAAGGTGAAGGGATACGCGTATTTTTAGTGTAGAAGCTATTGTTGTTGTGACAATTCATGTTACATGATTTCCCGACACTCTTAGACTCTCATTTTCAATTCTGCAGCTTCAGGGGGATAACACACGTACACAACTTGTGAACCAACCCCAGCCATCTACCAAGCGCATTCACCACAACTCCAGTCAACACCCACTGGTCTGTTTTGCGAAAGCATTGCTAGGCATCGTGATGTTAGTAATGTTTGCCCGAGACATGGTGCTATACCGACTCAGGCGCTAAATATTAGCATGAAGCATTGTCTCAATCTCGGCTTAAGCTTTTTCATATCATGTATCTGTCTTCTGCCTCACAGGTCTTGTATTGATTATATGGCTACTATGTCTACTATGTCGTCGATGCCCCTCGAATTTCTTCAATATTGTTCTAGTCTAGTAAAACTTTCTTATTTGAGAGCCACTATGAGTTTTTTTAATATGCTAACGATAGGTTTCATGTCCCACCGTGTCTTAAATAGTGAGATGAAACCTAACCAAGGAAGTTTGTTGATCATATCGGCAGCCATTCACCTAGCTTCACCCTAAAATCTTCCTAGAACATTCTTCGCCTATAGTATGCTTCGAAAAATCCCTACTCTCT TCTCCCTTGACAACTTAAGCACCTCACCCCACCCAGTCAATGCAAGTCCTCCTTGCTTCTGCTCCTGCTCCTGCTCCTGCTCCGTTGTTATAGTTATAAACATCCACCACCAACTCCGACGCCCTTCCTACCAAATCCATGGCCACCACCGCTGAATTTTCGTATCTTTCTTCATTGCCGGCTGGTTTTGTTTTCCGTCCCACGGAGGAGCAGCTCATTACCCACTACCTGAAGAACAAGAATGATGGCAACGAGTCTGTTGTTAGTTTTATCAAGGAGATTGATCTGTACAAGTTCGAACCCGAGCAACTCCCAGACAAATCGTTCATCCCGTCTGATAATTTCGAGTGGTTTTTCTTCCGGGCCAACACCTTGGACATTGAAAGAACCACGGGTACTGGCAGCTGGAAATCCACCGGTGAACCCCGCCCAATCAAGGCTCGAGGAACCAATGAAGTGATCGGAAGTAGACAAATCTTCGTGTTCCATCGAGGGCGGGGAGCCAAGGGTGTAAAGACCAATTGGGTGATACGCGAGTATAGGCTTCACCCAGACACTAAAATCCCTTCCCAGCACCCATTCCTCATTTTTAAATTGAAGGATAACAATGCAGATGGAGAGAAGAAAATCATACAGAAGCCTCGAGCTGGAACTTCTGAAAATCCAGATAATGCCATACAGAGTGAATGTGATTTTGAAAAGCAAATTATGGAATCGGTGTTAGGCAAGCATAAAAACTTGGACGAGATGACATCAAACAACCACGAGGAATCGGAGGAATCGGATGACACTTATTCTGATAACCAAATAAAATACTTGCGTAGAGTACTCAGACGTGTAAAGGTATACGAAGAAAGTAAACCACAAAACGCCCCATTGCCGAGGAAACCCGGAAGTACAAATGTGTCCCCATCCAAGCTTCAGGGGGATAACACACGTACACAACTTGTGAACCAACCCCAGCCATCTACCAAGCGCATTCACCACAACTCCAGTCAACACCCACTGGTCTGTTTTGCGAAAGCATTGCTAGGCATCGTGATGTTAGTAATGTTTGCCCGAGACATGGTGCTATACCGACTCAGGCGCTAAATATTAGCATGAAGCATTGTCTCAATCTCGGCTTAAGCTTTTTCATATCATGTATCTGTCTTCTGCCTCACAGGTCTTGTATTGATTATATGGCTACTATGTCTACTATGTCGTCGATGCCCCTCGAATTTCTTCAATATTGTTCTAGTCTAGTAAAACTTTCTTATTTGAGAGCCACTATGAGTTTTTTTAATATGCTAACGATAGGTTTCATGTCCCACCGTGTCTTAAATAGTGAGATGAAACCTAACCAAGGAAGTTTGTTGATCATATCGGCAGCCATTCACCTAGCTTCACCCTAAAATCTTCCTAGAACATTCTTCGCCTATAGTATGCTTCGAAAAATCCCTACTCTCT ATGGCCACCACCGCTGAATTTTCGTATCTTTCTTCATTGCCGGCTGGTTTTGTTTTCCGTCCCACGGAGGAGCAGCTCATTACCCACTACCTGAAGAACAAGAATGATGGCAACGAGTCTGTTGTTAGTTTTATCAAGGAGATTGATCTGTACAAGTTCGAACCCGAGCAACTCCCAGACAAATCGTTCATCCCGTCTGATAATTTCGAGTGGTTTTTCTTCCGGGCCAACACCTTGGACATTGAAAGAACCACGGGTACTGGCAGCTGGAAATCCACCGGTGAACCCCGCCCAATCAAGGCTCGAGGAACCAATGAAGTGATCGGAAGTAGACAAATCTTCGTGTTCCATCGAGGGCGGGGAGCCAAGGGTGTAAAGACCAATTGGGTGATACGCGAGTATAGGCTTCACCCAGACACTAAAATCCCTTCCCAGCACCCATTCCTCATTTTTAAATTGAAGGATAACAATGCAGATGGAGAGAAGAAAATCATACAGAAGCCTCGAGCTGGAACTTCTGAAAATCCAGATAATGCCATACAGAGTGAATGTGATTTTGAAAAGCAAATTATGGAATCGGTGTTAGGCAAGCATAAAAACTTGGACGAGATGACATCAAACAACCACGAGGAATCGGAGGAATCGGATGACACTTATTCTGATAACCAAATAAAATACTTGCGTAGAGTACTCAGACGTGTAAAGGTATACGAAGAAAGTAAACCACAAAACGCCCCATTGCCGAGGAAACCCGGAAGTACAAATGTGTCCCCATCCAAGCTTCAGGGGGATAACACACGTACACAACTTGTGAACCAACCCCAGCCATCTACCAAGCGCATTCACCACAACTCCAGTCAACACCCACTGGTCTGTTTTGCGAAAGCATTGCTAGGCATCGTGATGTTAGTAATGTTTGCCCGAGACATGGTGCTATACCGACTCAGGCGCTAA MATTAEFSYLSSLPAGFVFRPTEEQLITHYLKNKNDGNESVVSFIKEIDLYKFEPEQLPDKSFIPSDNFEWFFFRANTLDIERTTGTGSWKSTGEPRPIKARGTNEVIGSRQIFVFHRGRGAKGVKTNWVIREYRLHPDTKIPSQHPFLIFKLKDNNADGEKKIIQKPRAGTSENPDNAIQSECDFEKQIMESVLGKHKNLDEMTSNNHEESEESDDTYSDNQIKYLRRVLRRVKVYEESKPQNAPLPRKPGSTNVSPSKLQGDNTRTQLVNQPQPSTKRIHHNSSQHPLVCFAKALLGIVMLVMFARDMVLYRLRR
BLAST of CmaCh06G009270 vs. Swiss-Prot
Match: NTL9_ARATH (Protein NTM1-like 9 OS=Arabidopsis thaliana GN=NTL9 PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.9e-27 Identity = 72/181 (39.78%), Postives = 103/181 (56.91%), Query Frame = 1
BLAST of CmaCh06G009270 vs. Swiss-Prot
Match: NAC86_ARATH (NAC domain-containing protein 86 OS=Arabidopsis thaliana GN=NAC086 PE=2 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.9e-27 Identity = 64/139 (46.04%), Postives = 83/139 (59.71%), Query Frame = 1
BLAST of CmaCh06G009270 vs. Swiss-Prot
Match: NAC62_ARATH (NAC domain-containing protein 62 OS=Arabidopsis thaliana GN=NAC062 PE=1 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 8.4e-27 Identity = 66/153 (43.14%), Postives = 91/153 (59.48%), Query Frame = 1
BLAST of CmaCh06G009270 vs. Swiss-Prot
Match: NAC40_ARATH (NAC domain-containing protein 40 OS=Arabidopsis thaliana GN=NTL8 PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.5e-26 Identity = 88/283 (31.10%), Postives = 149/283 (52.65%), Query Frame = 1
BLAST of CmaCh06G009270 vs. Swiss-Prot
Match: NAC14_ARATH (NAC domain-containing protein 14 OS=Arabidopsis thaliana GN=NAC014 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.2e-26 Identity = 66/168 (39.29%), Postives = 95/168 (56.55%), Query Frame = 1
BLAST of CmaCh06G009270 vs. TrEMBL
Match: A0A0A0L657_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G062590 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.0e-35 Identity = 100/274 (36.50%), Postives = 153/274 (55.84%), Query Frame = 1
BLAST of CmaCh06G009270 vs. TrEMBL
Match: A0A0A0LWI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G572390 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 8.8e-31 Identity = 70/147 (47.62%), Postives = 91/147 (61.90%), Query Frame = 1
BLAST of CmaCh06G009270 vs. TrEMBL
Match: A0A0S3SZB6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G184500 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 4.3e-30 Identity = 79/180 (43.89%), Postives = 105/180 (58.33%), Query Frame = 1
BLAST of CmaCh06G009270 vs. TrEMBL
Match: A0A0L9VPW5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g000500 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 4.3e-30 Identity = 79/180 (43.89%), Postives = 105/180 (58.33%), Query Frame = 1
BLAST of CmaCh06G009270 vs. TrEMBL
Match: V7APU1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G121100g PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 6.3e-29 Identity = 77/194 (39.69%), Postives = 107/194 (55.15%), Query Frame = 1
BLAST of CmaCh06G009270 vs. TAIR10
Match: AT4G35580.2 (AT4G35580.2 NAC transcription factor-like 9) HSP 1 Score: 124.0 bits (310), Expect = 1.6e-28 Identity = 72/181 (39.78%), Postives = 103/181 (56.91%), Query Frame = 1
BLAST of CmaCh06G009270 vs. TAIR10
Match: AT5G17260.1 (AT5G17260.1 NAC domain containing protein 86) HSP 1 Score: 123.2 bits (308), Expect = 2.8e-28 Identity = 64/139 (46.04%), Postives = 83/139 (59.71%), Query Frame = 1
BLAST of CmaCh06G009270 vs. TAIR10
Match: AT3G49530.1 (AT3G49530.1 NAC domain containing protein 62) HSP 1 Score: 122.5 bits (306), Expect = 4.8e-28 Identity = 66/153 (43.14%), Postives = 91/153 (59.48%), Query Frame = 1
BLAST of CmaCh06G009270 vs. TAIR10
Match: AT5G46590.1 (AT5G46590.1 NAC domain containing protein 96) HSP 1 Score: 122.5 bits (306), Expect = 4.8e-28 Identity = 61/135 (45.19%), Postives = 86/135 (63.70%), Query Frame = 1
BLAST of CmaCh06G009270 vs. TAIR10
Match: AT4G17980.1 (AT4G17980.1 NAC domain containing protein 71) HSP 1 Score: 120.9 bits (302), Expect = 1.4e-27 Identity = 60/132 (45.45%), Postives = 80/132 (60.61%), Query Frame = 1
BLAST of CmaCh06G009270 vs. NCBI nr
Match: gi|659096420|ref|XP_008449087.1| (PREDICTED: NAC domain-containing protein 7-like [Cucumis melo]) HSP 1 Score: 164.1 bits (414), Expect = 4.0e-37 Identity = 86/180 (47.78%), Postives = 117/180 (65.00%), Query Frame = 1
BLAST of CmaCh06G009270 vs. NCBI nr
Match: gi|778675913|ref|XP_011650496.1| (PREDICTED: protein NTM1-like 8 isoform X1 [Cucumis sativus]) HSP 1 Score: 157.9 bits (398), Expect = 2.9e-35 Identity = 100/274 (36.50%), Postives = 153/274 (55.84%), Query Frame = 1
BLAST of CmaCh06G009270 vs. NCBI nr
Match: gi|778675916|ref|XP_004149581.2| (PREDICTED: protein NTM1-like 8 isoform X2 [Cucumis sativus]) HSP 1 Score: 157.9 bits (398), Expect = 2.9e-35 Identity = 100/274 (36.50%), Postives = 153/274 (55.84%), Query Frame = 1
BLAST of CmaCh06G009270 vs. NCBI nr
Match: gi|659099645|ref|XP_008450705.1| (PREDICTED: uncharacterized protein LOC103492204 isoform X2 [Cucumis melo]) HSP 1 Score: 148.3 bits (373), Expect = 2.3e-32 Identity = 73/147 (49.66%), Postives = 96/147 (65.31%), Query Frame = 1
BLAST of CmaCh06G009270 vs. NCBI nr
Match: gi|659099643|ref|XP_008450704.1| (PREDICTED: uncharacterized protein LOC103492204 isoform X1 [Cucumis melo]) HSP 1 Score: 148.3 bits (373), Expect = 2.3e-32 Identity = 73/147 (49.66%), Postives = 96/147 (65.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|