CmaCh06G009170 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh06G009170
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionAuxin-responsive protein
LocationCma_Chr06 : 6070153 .. 6070717 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCAATTTCTGTTCCATTTGGGCGGCTCTTCCTGTCCCCTCCTCTGTCCCCTCTCCCCTTTCCCTTTGCCGCTCTCTGCCCCCATTCCCACCGACATCTCCTTCTTCATCTTATCTATAAAACCACCCTTCCATTTCCAGCCTTTTCTGCTCTCACAAACCAAAAAATGGATTCCCAGCTTTCATTTCAGAACCATCTCAATCTCGAAGCCACCCAGCTTCGCCTCGGCCTCCCAGGAATCGACGGCTCTGCAGACAACTCTTGTGGGGTTCGAACTAACAAGAGAAATTTACAGAATCACTCTGCCCCTCCACCCAAGTAAGTGCCGTGTTTCGATTTTGACTCTTGTAATGGTTTTTGGGGCTCTGTTTTGATTCTCAATTTGTGTTTTTGTAGGTCTCAGGTTGTTGGGTGGCCGCCGATTAGATCGTTTAGGAAAAACACTCTCTTACCCAAGAAAACGGAGGCAACGACGGCGGCGGAGGGCGGAGGGATTTATGTGAAAGTGAGTATGGATGGAGCTCCTTATTTGAGGAAGGTTGATTTGGGTGTGTACAAGGGGTAC

mRNA sequence

TTCAATTTCTGTTCCATTTGGGCGGCTCTTCCTGTCCCCTCCTCTGTCCCCTCTCCCCTTTCCCTTTGCCGCTCTCTGCCCCCATTCCCACCGACATCTCCTTCTTCATCTTATCTATAAAACCACCCTTCCATTTCCAGCCTTTTCTGCTCTCACAAACCAAAAAATGGATTCCCAGCTTTCATTTCAGAACCATCTCAATCTCGAAGCCACCCAGCTTCGCCTCGGCCTCCCAGGAATCGACGGCTCTGCAGACAACTCTTGTGGGGTTCGAACTAACAAGAGAAATTTACAGAATCACTCTGCCCCTCCACCCAAGTCTCAGGTTGTTGGGTGGCCGCCGATTAGATCGTTTAGGAAAAACACTCTCTTACCCAAGAAAACGGAGGCAACGACGGCGGCGGAGGGCGGAGGGATTTATGTGAAAGTGAGTATGGATGGAGCTCCTTATTTGAGGAAGGTTGATTTGGGTGTGTACAAGGGGTAC

Coding sequence (CDS)

ATGGATTCCCAGCTTTCATTTCAGAACCATCTCAATCTCGAAGCCACCCAGCTTCGCCTCGGCCTCCCAGGAATCGACGGCTCTGCAGACAACTCTTGTGGGGTTCGAACTAACAAGAGAAATTTACAGAATCACTCTGCCCCTCCACCCAAGTCTCAGGTTGTTGGGTGGCCGCCGATTAGATCGTTTAGGAAAAACACTCTCTTACCCAAGAAAACGGAGGCAACGACGGCGGCGGAGGGCGGAGGGATTTATGTGAAAGTGAGTATGGATGGAGCTCCTTATTTGAGGAAGGTTGATTTGGGTGTGTACAAGGGGTAC

Protein sequence

MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY
Homology
[Close]
BLAST of CmaCh06G009170 vs. Swiss-Prot
Match: AX22B_VIGRR (Auxin-induced protein 22B OS=Vigna radiata var. radiata GN=AUX22B PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.3e-24
Identity = 64/131 (48.85%), Postives = 82/131 (62.60%), Query Frame = 1 

Query: 1   MDSQLSFQNHLNLEATQLRLGLPGIDGSADNSCG----VRTNKRNL-------------- 60
           M+S++ F++ LNL+AT+LRLGLPG +   DN+      +R NKR +              
Sbjct: 1   MESRVVFESDLNLKATELRLGLPGTEEKEDNNLRTHAVLRNNKRQVRETSQDSVSISKAS 60

Query: 61  --QNH----SAPPPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYL 108
             Q H    SAPPPK+++VGWPPIRS+RKN++           EG GI+VKVSMDGAPYL
Sbjct: 61  HHQQHVETVSAPPPKAKIVGWPPIRSYRKNSV--------QEGEGDGIFVKVSMDGAPYL 120

[Close]
BLAST of CmaCh06G009170 vs. Swiss-Prot
Match: AX22D_VIGRR (Auxin-induced protein 22D OS=Vigna radiata var. radiata GN=AUX22D PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.3e-23
Identity = 59/119 (49.58%), Postives = 75/119 (63.03%), Query Frame = 1 

Query: 6   SFQNHLNLEATQLRLGLPGIDGSADNSCGVRTNKRNL-----------------QNHSAP 65
           S++  LNL+AT+LRLGLPG D   +     R+NKR+                  +++  P
Sbjct: 7   SYEKELNLKATELRLGLPGSD-EPEKRATARSNKRSSPEASDEESISNGSDVTKEDNVVP 66

Query: 66  PPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           P K+QVVGWPPIRS+RKN +  KK E +   EG G+YVKVSM GAPYLRK+DL VYK Y
Sbjct: 67  PAKAQVVGWPPIRSYRKNNVQQKKEEES---EGNGMYVKVSMAGAPYLRKIDLKVYKSY 121

[Close]
BLAST of CmaCh06G009170 vs. Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 7.3e-23
Identity = 58/114 (50.88%), Postives = 72/114 (63.16%), Query Frame = 1 

Query: 11  LNLEATQLRLGLPGIDGSADN----SCGVRTNKRNL-------------QNHSAPPPKSQ 70
           +NL+ T+LRLGLPG D   +     SC    NKR L             +  ++PP K+Q
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKAQ 64

Query: 71  VVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           +VGWPP+RS+RKN +  KK E+    EG GIYVKVSMDGAPYLRK+DL  YKGY
Sbjct: 65  IVGWPPVRSYRKNNIQSKKNESEH--EGQGIYVKVSMDGAPYLRKIDLSCYKGY 116

[Close]
BLAST of CmaCh06G009170 vs. Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 58/109 (53.21%), Postives = 76/109 (69.72%), Query Frame = 1 

Query: 11  LNLEATQLRLGLPGIDGSADNSCGVRTNKRNL------------QNHSAPPPKSQVVGWP 70
           +NL+AT+LRLGLPG + +   SCG ++NKR L            +  +A PPK+Q+VGWP
Sbjct: 11  VNLKATELRLGLPGTEETV--SCG-KSNKRVLPEATEKEIESTGKTETASPPKAQIVGWP 70

Query: 71  PIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           P+RS+RKN +  KK+E+    EG G YVKVSMDGAPYLRK+DL +YK Y
Sbjct: 71  PVRSYRKNNVQTKKSES----EGQGNYVKVSMDGAPYLRKIDLTMYKQY 112

[Close]
BLAST of CmaCh06G009170 vs. Swiss-Prot
Match: AX22E_VIGRR (Auxin-induced protein 22E OS=Vigna radiata var. radiata GN=AUX22E PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.4e-20
Identity = 61/132 (46.21%), Postives = 74/132 (56.06%), Query Frame = 1 

Query: 6   SFQNHLNLEATQLRLGLPGID---------GSADNSCGVRTN--------KRNLQNHSAP 65
           S++  LNL AT+LRLGLPG D         GS   S   R++        K N+ + S+ 
Sbjct: 3   SYETELNLRATELRLGLPGSDEPQEKRPCSGSVVRSSNKRSSPELEESRCKSNINSDSSD 62

Query: 66  -------------PPKSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPY 108
                        P K QVVGWPPIRSFRKN+L  KK E     +G G+Y+KVSM GAPY
Sbjct: 63  STTTSDHNEDSVQPAKVQVVGWPPIRSFRKNSLQQKKVEQ---GDGTGMYLKVSMAGAPY 122

[Close]
BLAST of CmaCh06G009170 vs. TrEMBL
Match: A0A0A0LIA8_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_2G200440 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.7e-37
Identity = 83/113 (73.45%), Postives = 91/113 (80.53%), Query Frame = 1 

Query: 1   MDSQLSFQNHLNLEATQLRLGLPGI-----DGSADNSCGVRTNKRNLQNHSAPPPKSQVV 60
           M+S ++F N LNLEAT+LRLGLPGI     D SA +S     NKRN QN SAPPPK+QVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGIVSERDDSSATSSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNTLLPKKTEA-TTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           GWPPIRSFRKNTL  KKTEA TTA +GGGIYVKVSMDGAPYLRK+DL VYKGY
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTTAVDGGGIYVKVSMDGAPYLRKIDLSVYKGY 113

[Close]
BLAST of CmaCh06G009170 vs. TrEMBL
Match: A0A0D2PKN9_GOSRA (Auxin-responsive protein OS=Gossypium raimondii GN=B456_005G046400 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.4e-27
Identity = 67/121 (55.37%), Postives = 82/121 (67.77%), Query Frame = 1 

Query: 1   MDSQLSFQNHLNLEATQLRLGLPG-------------IDGSADNSCGVRTNKRNLQNHSA 60
           M+  + + N LNL+AT+LRLGLPG             +   AD+ CGV   K + QN +A
Sbjct: 1   MEGSVGYDNDLNLKATELRLGLPGTEPVSIVRRNKRSLQQVADDDCGVNGCKSDDQNETA 60

Query: 61  PPP-KSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKG 108
           PPP K+Q+VGWPPIRS+RKN +  KK E+    EGGGIYVKVSMDGAPYLRK+DL VY G
Sbjct: 61  PPPPKAQIVGWPPIRSYRKNNIQTKKNES----EGGGIYVKVSMDGAPYLRKIDLKVYSG 117

[Close]
BLAST of CmaCh06G009170 vs. TrEMBL
Match: A0A0D2PKN8_GOSRA (Auxin-responsive protein OS=Gossypium raimondii GN=B456_005G046400 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.4e-27
Identity = 67/121 (55.37%), Postives = 82/121 (67.77%), Query Frame = 1 

Query: 1   MDSQLSFQNHLNLEATQLRLGLPG-------------IDGSADNSCGVRTNKRNLQNHSA 60
           M+  + + N LNL+AT+LRLGLPG             +   AD+ CGV   K + QN +A
Sbjct: 1   MEGSVGYDNDLNLKATELRLGLPGTEPVSIVRRNKRSLQQVADDDCGVNGCKSDDQNETA 60

Query: 61  PPP-KSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKG 108
           PPP K+Q+VGWPPIRS+RKN +  KK E+    EGGGIYVKVSMDGAPYLRK+DL VY G
Sbjct: 61  PPPPKAQIVGWPPIRSYRKNNIQTKKNES----EGGGIYVKVSMDGAPYLRKIDLKVYSG 117

[Close]
BLAST of CmaCh06G009170 vs. TrEMBL
Match: A0A0D2RD28_GOSRA (Auxin-responsive protein OS=Gossypium raimondii GN=B456_005G046400 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.4e-27
Identity = 67/121 (55.37%), Postives = 82/121 (67.77%), Query Frame = 1 

Query: 1   MDSQLSFQNHLNLEATQLRLGLPG-------------IDGSADNSCGVRTNKRNLQNHSA 60
           M+  + + N LNL+AT+LRLGLPG             +   AD+ CGV   K + QN +A
Sbjct: 1   MEGSVGYDNDLNLKATELRLGLPGTEPVSIVRRNKRSLQQVADDDCGVNGCKSDDQNETA 60

Query: 61  PPP-KSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKG 108
           PPP K+Q+VGWPPIRS+RKN +  KK E+    EGGGIYVKVSMDGAPYLRK+DL VY G
Sbjct: 61  PPPPKAQIVGWPPIRSYRKNNIQTKKNES----EGGGIYVKVSMDGAPYLRKIDLKVYSG 117

[Close]
BLAST of CmaCh06G009170 vs. TrEMBL
Match: A0A0D2S8J6_GOSRA (Auxin-responsive protein OS=Gossypium raimondii GN=B456_005G046400 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.4e-27
Identity = 67/121 (55.37%), Postives = 82/121 (67.77%), Query Frame = 1 

Query: 1   MDSQLSFQNHLNLEATQLRLGLPG-------------IDGSADNSCGVRTNKRNLQNHSA 60
           M+  + + N LNL+AT+LRLGLPG             +   AD+ CGV   K + QN +A
Sbjct: 1   MEGSVGYDNDLNLKATELRLGLPGTEPVSIVRRNKRSLQQVADDDCGVNGCKSDDQNETA 60

Query: 61  PPP-KSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKG 108
           PPP K+Q+VGWPPIRS+RKN +  KK E+    EGGGIYVKVSMDGAPYLRK+DL VY G
Sbjct: 61  PPPPKAQIVGWPPIRSYRKNNIQTKKNES----EGGGIYVKVSMDGAPYLRKIDLKVYSG 117

[Close]
BLAST of CmaCh06G009170 vs. TAIR10
Match: AT1G04240.1 (AT1G04240.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 107.8 bits (268), Expect = 4.1e-24
Identity = 58/114 (50.88%), Postives = 72/114 (63.16%), Query Frame = 1 

Query: 11  LNLEATQLRLGLPGIDGSADN----SCGVRTNKRNL-------------QNHSAPPPKSQ 70
           +NL+ T+LRLGLPG D   +     SC    NKR L             +  ++PP K+Q
Sbjct: 5   VNLKETELRLGLPGTDNVCEAKERVSCCNNNNKRVLSTDTEKEIESSSRKTETSPPRKAQ 64

Query: 71  VVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           +VGWPP+RS+RKN +  KK E+    EG GIYVKVSMDGAPYLRK+DL  YKGY
Sbjct: 65  IVGWPPVRSYRKNNIQSKKNESEH--EGQGIYVKVSMDGAPYLRKIDLSCYKGY 116

[Close]
BLAST of CmaCh06G009170 vs. TAIR10
Match: AT5G43700.1 (AT5G43700.1 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 107.1 bits (266), Expect = 7.0e-24
Identity = 58/109 (53.21%), Postives = 76/109 (69.72%), Query Frame = 1 

Query: 11  LNLEATQLRLGLPGIDGSADNSCGVRTNKRNL------------QNHSAPPPKSQVVGWP 70
           +NL+AT+LRLGLPG + +   SCG ++NKR L            +  +A PPK+Q+VGWP
Sbjct: 11  VNLKATELRLGLPGTEETV--SCG-KSNKRVLPEATEKEIESTGKTETASPPKAQIVGWP 70

Query: 71  PIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           P+RS+RKN +  KK+E+    EG G YVKVSMDGAPYLRK+DL +YK Y
Sbjct: 71  PVRSYRKNNVQTKKSES----EGQGNYVKVSMDGAPYLRKIDLTMYKQY 112

[Close]
BLAST of CmaCh06G009170 vs. TAIR10
Match: AT4G14560.1 (AT4G14560.1 indole-3-acetic acid inducible)

HSP 1 Score: 89.4 bits (220), Expect = 1.5e-18
Identity = 54/106 (50.94%), Postives = 66/106 (62.26%), Query Frame = 1 

Query: 9   NHLNLEATQLRLGLPGI--DGSADNSCGVRTNKRNLQN----HSAPPP-KSQVVGWPPIR 68
           N LNL+ T+LRLGLPG   +   + SC VR+N +   N     SAPPP K+Q+VGWPP+R
Sbjct: 5   NGLNLKDTELRLGLPGAQEEQQLELSC-VRSNNKRKNNDSTEESAPPPAKTQIVGWPPVR 64

Query: 69  SFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           S RKN      +           YVKVSMDGAPYLRK+DL +YK Y
Sbjct: 65  SNRKNNNNKNVS-----------YVKVSMDGAPYLRKIDLKMYKNY 98

[Close]
BLAST of CmaCh06G009170 vs. TAIR10
Match: AT3G23030.1 (AT3G23030.1 indole-3-acetic acid inducible 2)

HSP 1 Score: 86.7 bits (213), Expect = 9.7e-18
Identity = 51/108 (47.22%), Postives = 59/108 (54.63%), Query Frame = 1 

Query: 9   NHLNLEATQLRLGLPG----IDGSADNSCGVRTNKRNLQN-----HSAPPPKSQVVGWPP 68
           N LNL+ T+L LGLPG    I    + SC    NKR  +       S PP K+Q+VGWPP
Sbjct: 7   NELNLKDTELCLGLPGRTEKIKEEQEVSCVKSNNKRLFEETRDEEESTPPTKTQIVGWPP 66

Query: 69  IRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           +RS RKN                  YVKVSMDGAPYLRK+DL  YK Y
Sbjct: 67  VRSSRKN-------------NNSVSYVKVSMDGAPYLRKIDLKTYKNY 101

[Close]
BLAST of CmaCh06G009170 vs. TAIR10
Match: AT3G23050.1 (AT3G23050.1 indole-3-acetic acid 7)

HSP 1 Score: 85.1 bits (209), Expect = 2.8e-17
Identity = 57/143 (39.86%), Postives = 72/143 (50.35%), Query Frame = 1 

Query: 11  LNLEATQLRLGLPG--------------------------------IDGSAD--NSCGVR 70
           +NL+AT+L LGLPG                                 +GS D  N   V 
Sbjct: 6   MNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDLKNVSAVP 65

Query: 71  TNKRNLQNHSAPPPKSQVVGWPPIRSFRKNTLLPKKT-----EATTAAEG-------GGI 108
             K  L++ S PP K+QVVGWPP+R++RKN +  +KT     EA++   G       G  
Sbjct: 66  KEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAG 125

[Close]
BLAST of CmaCh06G009170 vs. NCBI nr
Match: gi|659096792|ref|XP_008449289.1| (PREDICTED: auxin-induced protein 22B [Cucumis melo])

HSP 1 Score: 162.5 bits (410), Expect = 4.0e-37
Identity = 83/113 (73.45%), Postives = 92/113 (81.42%), Query Frame = 1 

Query: 1   MDSQLSFQNHLNLEATQLRLGLPGI-----DGSADNSCGVRTNKRNLQNHSAPPPKSQVV 60
           M+S ++F N LNLEAT+LRLGLPG+     D SA +S     NKRN QN SAPPPK+QVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGVVSERDDSSAASSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNTLLPKKTEATTAA-EGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           GWPPIRSFRKNTL  KKTEATTAA +GGGIYVKVSMDGAPYLRK+DL VYKGY
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTAAVDGGGIYVKVSMDGAPYLRKIDLSVYKGY 113

[Close]
BLAST of CmaCh06G009170 vs. NCBI nr
Match: gi|449465437|ref|XP_004150434.1| (PREDICTED: auxin-induced protein 22B-like [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 6.8e-37
Identity = 83/113 (73.45%), Postives = 91/113 (80.53%), Query Frame = 1 

Query: 1   MDSQLSFQNHLNLEATQLRLGLPGI-----DGSADNSCGVRTNKRNLQNHSAPPPKSQVV 60
           M+S ++F N LNLEAT+LRLGLPGI     D SA +S     NKRN QN SAPPPK+QVV
Sbjct: 1   MESNVTFHNDLNLEATELRLGLPGIVSERDDSSATSSAVKPNNKRNFQNDSAPPPKAQVV 60

Query: 61  GWPPIRSFRKNTLLPKKTEA-TTAAEGGGIYVKVSMDGAPYLRKVDLGVYKGY 108
           GWPPIRSFRKNTL  KKTEA TTA +GGGIYVKVSMDGAPYLRK+DL VYKGY
Sbjct: 61  GWPPIRSFRKNTLQVKKTEATTTAVDGGGIYVKVSMDGAPYLRKIDLSVYKGY 113

[Close]
BLAST of CmaCh06G009170 vs. NCBI nr
Match: gi|763760292|gb|KJB27546.1| (hypothetical protein B456_005G046400 [Gossypium raimondii])

HSP 1 Score: 128.6 bits (322), Expect = 6.3e-27
Identity = 67/121 (55.37%), Postives = 82/121 (67.77%), Query Frame = 1 

Query: 1   MDSQLSFQNHLNLEATQLRLGLPG-------------IDGSADNSCGVRTNKRNLQNHSA 60
           M+  + + N LNL+AT+LRLGLPG             +   AD+ CGV   K + QN +A
Sbjct: 1   MEGSVGYDNDLNLKATELRLGLPGTEPVSIVRRNKRSLQQVADDDCGVNGCKSDDQNETA 60

Query: 61  PPP-KSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKG 108
           PPP K+Q+VGWPPIRS+RKN +  KK E+    EGGGIYVKVSMDGAPYLRK+DL VY G
Sbjct: 61  PPPPKAQIVGWPPIRSYRKNNIQTKKNES----EGGGIYVKVSMDGAPYLRKIDLKVYSG 117

[Close]
BLAST of CmaCh06G009170 vs. NCBI nr
Match: gi|763760291|gb|KJB27545.1| (hypothetical protein B456_005G046400 [Gossypium raimondii])

HSP 1 Score: 128.6 bits (322), Expect = 6.3e-27
Identity = 67/121 (55.37%), Postives = 82/121 (67.77%), Query Frame = 1 

Query: 1   MDSQLSFQNHLNLEATQLRLGLPG-------------IDGSADNSCGVRTNKRNLQNHSA 60
           M+  + + N LNL+AT+LRLGLPG             +   AD+ CGV   K + QN +A
Sbjct: 1   MEGSVGYDNDLNLKATELRLGLPGTEPVSIVRRNKRSLQQVADDDCGVNGCKSDDQNETA 60

Query: 61  PPP-KSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKG 108
           PPP K+Q+VGWPPIRS+RKN +  KK E+    EGGGIYVKVSMDGAPYLRK+DL VY G
Sbjct: 61  PPPPKAQIVGWPPIRSYRKNNIQTKKNES----EGGGIYVKVSMDGAPYLRKIDLKVYSG 117

[Close]
BLAST of CmaCh06G009170 vs. NCBI nr
Match: gi|823163967|ref|XP_012481930.1| (PREDICTED: auxin-responsive protein IAA4-like [Gossypium raimondii])

HSP 1 Score: 128.6 bits (322), Expect = 6.3e-27
Identity = 67/121 (55.37%), Postives = 82/121 (67.77%), Query Frame = 1 

Query: 1   MDSQLSFQNHLNLEATQLRLGLPG-------------IDGSADNSCGVRTNKRNLQNHSA 60
           M+  + + N LNL+AT+LRLGLPG             +   AD+ CGV   K + QN +A
Sbjct: 1   MEGSVGYDNDLNLKATELRLGLPGTEPVSIVRRNKRSLQQVADDDCGVNGCKSDDQNETA 60

Query: 61  PPP-KSQVVGWPPIRSFRKNTLLPKKTEATTAAEGGGIYVKVSMDGAPYLRKVDLGVYKG 108
           PPP K+Q+VGWPPIRS+RKN +  KK E+    EGGGIYVKVSMDGAPYLRK+DL VY G
Sbjct: 61  PPPPKAQIVGWPPIRSYRKNNIQTKKNES----EGGGIYVKVSMDGAPYLRKIDLKVYSG 117

The following BLAST results are available for this feature:
BLAST of CmaCh06G009170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AX22B_VIGRR2.3e-2448.85Auxin-induced protein 22B OS=Vigna radiata var. radiata GN=AUX22B PE=2 SV=1[more]
AX22D_VIGRR4.3e-2349.58Auxin-induced protein 22D OS=Vigna radiata var. radiata GN=AUX22D PE=2 SV=1[more]
IAA3_ARATH7.3e-2350.88Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1[more]
IAA4_ARATH1.2e-2253.21Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=1 SV=2[more]
AX22E_VIGRR3.4e-2046.21Auxin-induced protein 22E OS=Vigna radiata var. radiata GN=AUX22E PE=2 SV=1[more]
BLAST of CmaCh06G009170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIA8_CUCSA4.7e-3773.45Auxin-responsive protein OS=Cucumis sativus GN=Csa_2G200440 PE=3 SV=1[more]
A0A0D2PKN9_GOSRA4.4e-2755.37Auxin-responsive protein OS=Gossypium raimondii GN=B456_005G046400 PE=3 SV=1[more]
A0A0D2PKN8_GOSRA4.4e-2755.37Auxin-responsive protein OS=Gossypium raimondii GN=B456_005G046400 PE=3 SV=1[more]
A0A0D2RD28_GOSRA4.4e-2755.37Auxin-responsive protein OS=Gossypium raimondii GN=B456_005G046400 PE=3 SV=1[more]
A0A0D2S8J6_GOSRA4.4e-2755.37Auxin-responsive protein OS=Gossypium raimondii GN=B456_005G046400 PE=3 SV=1[more]
BLAST of CmaCh06G009170 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G04240.14.1e-2450.88 AUX/IAA transcriptional regulator family protein[more]
AT5G43700.17.0e-2453.21 AUX/IAA transcriptional regulator family protein[more]
AT4G14560.11.5e-1850.94 indole-3-acetic acid inducible[more]
AT3G23030.19.7e-1847.22 indole-3-acetic acid inducible 2[more]
AT3G23050.12.8e-1739.86 indole-3-acetic acid 7[more]
BLAST of CmaCh06G009170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659096792|ref|XP_008449289.1|4.0e-3773.45PREDICTED: auxin-induced protein 22B [Cucumis melo][more]
gi|449465437|ref|XP_004150434.1|6.8e-3773.45PREDICTED: auxin-induced protein 22B-like [Cucumis sativus][more]
gi|763760292|gb|KJB27546.1|6.3e-2755.37hypothetical protein B456_005G046400 [Gossypium raimondii][more]
gi|763760291|gb|KJB27545.1|6.3e-2755.37hypothetical protein B456_005G046400 [Gossypium raimondii][more]
gi|823163967|ref|XP_012481930.1|6.3e-2755.37PREDICTED: auxin-responsive protein IAA4-like [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003311AUX_IAA
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G009170.1CmaCh06G009170.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 1..107
score: 2.5
NoneNo IPR availablePANTHERPTHR31734:SF11AUXIN-RESPONSIVE PROTEIN IAA1-RELATEDcoord: 1..107
score: 2.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh06G009170CmoCh06G009480Cucurbita moschata (Rifu)cmacmoB833
CmaCh06G009170Cp4.1LG08g00060Cucurbita pepo (Zucchini)cmacpeB850
CmaCh06G009170Carg22315Silver-seed gourdcarcmaB0820
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh06G009170Watermelon (97103) v2cmawmbB841
CmaCh06G009170Watermelon (97103) v2cmawmbB857
CmaCh06G009170Wax gourdcmawgoB0994
CmaCh06G009170Wax gourdcmawgoB1017
CmaCh06G009170Cucurbita maxima (Rimu)cmacmaB027
CmaCh06G009170Cucurbita maxima (Rimu)cmacmaB290
CmaCh06G009170Cucumber (Gy14) v1cgycmaB0728
CmaCh06G009170Cucumber (Gy14) v1cgycmaB0944
CmaCh06G009170Cucurbita moschata (Rifu)cmacmoB802
CmaCh06G009170Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G009170Wild cucumber (PI 183967)cmacpiB830
CmaCh06G009170Wild cucumber (PI 183967)cmacpiB844
CmaCh06G009170Cucumber (Chinese Long) v2cmacuB818
CmaCh06G009170Cucumber (Chinese Long) v2cmacuB831
CmaCh06G009170Melon (DHL92) v3.5.1cmameB753
CmaCh06G009170Melon (DHL92) v3.5.1cmameB766
CmaCh06G009170Watermelon (Charleston Gray)cmawcgB723
CmaCh06G009170Watermelon (Charleston Gray)cmawcgB738
CmaCh06G009170Watermelon (97103) v1cmawmB786
CmaCh06G009170Watermelon (97103) v1cmawmB799
CmaCh06G009170Cucurbita pepo (Zucchini)cmacpeB841
CmaCh06G009170Cucurbita pepo (Zucchini)cmacpeB855
CmaCh06G009170Bottle gourd (USVL1VR-Ls)cmalsiB766
CmaCh06G009170Bottle gourd (USVL1VR-Ls)cmalsiB753
CmaCh06G009170Cucumber (Gy14) v2cgybcmaB430
CmaCh06G009170Cucumber (Gy14) v2cgybcmaB444
CmaCh06G009170Melon (DHL92) v3.6.1cmamedB853
CmaCh06G009170Melon (DHL92) v3.6.1cmamedB863
CmaCh06G009170Silver-seed gourdcarcmaB1405
CmaCh06G009170Cucumber (Chinese Long) v3cmacucB0965
CmaCh06G009170Cucumber (Chinese Long) v3cmacucB0982