BLAST of CmaCh06G008510 vs. Swiss-Prot
Match:
RNP1_ARATH (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 SV=1)
HSP 1 Score: 243.8 bits (621), Expect = 3.8e-63
Identity = 165/452 (36.50%), Postives = 235/452 (51.99%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
M+SD GKLF+GGISW+TDE++LR++F +YGEV +A+++RD+ TGR RGFGFV+F+DP+V
Sbjct: 1 MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60
Query: 61 ERVILEKHIIDGRTVEAKKAVPKDDQN----TLNRNNGSIHGSPISGRTKKIFVGGLAST 120
+RV+ EKH ID R V+ K+A+ +++Q T N N G +TKKIFVGGL T
Sbjct: 61 DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPT 120
Query: 121 VTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMV 180
+T+ +F++YF+ +G +TDV +MYD +T RPRGFGF+++DSE+AVD VLHKTFH+L+GK V
Sbjct: 121 LTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQV 180
Query: 181 EVKRAIPKELTPGSNRSPVVGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGRLSPVF 240
EVKRA+PK+ PG G S G Y Q Y + G R
Sbjct: 181 EVKRALPKDANPGGG---------GRSMGGGGSGGY-QGYGGNESSYDGRMDSNRFLQHQ 240
Query: 241 SSRTGIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRFITPIG 300
S G+P +G++ YG GYG N A Y G + G
Sbjct: 241 SVGNGLPSYGSSGYGA----------GYGNGSNGAGYGA--------YGGYT-------G 300
Query: 301 YSGGNGRGDSLLSSSTWNVWGNGSMNNAMNSPNPGAFSGSGMGNFRVAYGNNDDNWSSAA 360
+GG G G + +T N+ G G ++ +P + + G YG+ +
Sbjct: 301 SAGGYGAGATAGYGAT-NIPGAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSGYGV 360
Query: 361 VGNHVGVNAPPGYTNNNGYGIGESEFGIRGGGYGRNGVVSSVATQKAFAETTDGYERSYR 420
G +P GY +N GYG G + GYG V + + + + Y
Sbjct: 361 PGAAPPTQSPSGY-SNQGYGYG--GYSGSDSGYGNQAAYGVVGGRPSGGGSNNPGSGGYM 401
Query: 421 ELYRDGTVHDDSTWPSTTPELDGSVPFGYGLG 449
G + D +W S + GYG G
Sbjct: 421 -----GGGYGDGSWRSDPSQ-------GYGGG 401
BLAST of CmaCh06G008510 vs. Swiss-Prot
Match:
RBP1_ARATH (RNA-binding protein 1 OS=Arabidopsis thaliana GN=RBP1 PE=2 SV=1)
HSP 1 Score: 191.4 bits (485), Expect = 2.2e-47
Identity = 96/209 (45.93%), Postives = 138/209 (66.03%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
M+ D KLF+GGI+ +T EE L+ YF YG V+EAV+ +++ TG+ RGFGFV FA+
Sbjct: 1 MDYDRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDV 60
Query: 61 ERVILEKHIIDGRTVEAKKAVPKDD-----------QNTLNRNNGSIH---GSPISGRTK 120
+ + + H I G+ V+ +KA+ K + + + + NG + + ++ RTK
Sbjct: 61 VKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQFLERKVQQMNGGLREMSSNGVTSRTK 120
Query: 121 KIFVGGLASTVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHK 180
KIFVGGL+S TE +F+ YF++FG TDVVVM+D T RPRGFGF+TYDSE++V++V+
Sbjct: 121 KIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQS 180
Query: 181 TFHELNGKMVEVKRAIPKELTPGSNRSPV 196
FHEL+ K VEVKRAIPKE +N + V
Sbjct: 181 NFHELSDKRVEVKRAIPKEGIQSNNGNAV 209
BLAST of CmaCh06G008510 vs. Swiss-Prot
Match:
MSIR6_DROME (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster GN=Rbp6 PE=2 SV=3)
HSP 1 Score: 181.4 bits (459), Expect = 2.3e-44
Identity = 104/254 (40.94%), Postives = 145/254 (57.09%), Query Frame = 1
Query: 3 SDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVAER 62
+D GK+FIGG+SW T E LRDYFG YG++ EA++++D +T R+RGFGFV F+DP ++
Sbjct: 26 NDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 85
Query: 63 VILE-KHIIDGRTVEAKKAVPKDDQNTLNRNNGSIHGSPISGRTKKIFVGGLASTVTEAD 122
V+ + H +DG+ V+ K A P+ H ++ RTKKIFVGGL++ T D
Sbjct: 86 VLTQGTHELDGKKVDPKVAFPR-----------RAHPKMVT-RTKKIFVGGLSAPTTLED 145
Query: 123 FQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMVEVKRA 182
+ YF+QFG I D ++M+D T R RGFGF+T+ SE+ VD V FHE+N KMVE K+A
Sbjct: 146 VKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKA 205
Query: 183 IPKEL--------TPGSNRSPVVGYNYGM-SRASGFLNSYTQSYNMSPLGSYGVRADGRL 242
PKE+ T + RS +G+ + GF P +Y A GR
Sbjct: 206 QPKEVMLPANLAKTRAAGRSAYDNIMWGLGTLPEGF-----------PAAAYAAYAAGR- 250
Query: 243 SPVFSSRTGIPHFG 247
+G P FG
Sbjct: 266 -----GYSGYPSFG 250
BLAST of CmaCh06G008510 vs. Swiss-Prot
Match:
DAZP1_XENLA (DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1)
HSP 1 Score: 178.7 bits (452), Expect = 1.5e-43
Identity = 96/229 (41.92%), Postives = 140/229 (61.14%), Query Frame = 1
Query: 4 DLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVAERV 63
++GKLF+GG+ W T +E LR YF YGEVV+ VI++D++T ++RGFGFV F DP V
Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67
Query: 64 ILEK-HIIDGRTVEAKKAVPKDDQNTLNR-NNGSIHGSPIS--GRTKKIFVGGLASTVTE 123
+ + H +DGR ++ K P+ Q +R G P + R+ KIFVGG+ E
Sbjct: 68 LASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGE 127
Query: 124 ADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMVEVK 183
+ ++YF++FG +T+VV++YD QRPRGFGFIT++ E++VD ++ FH++ GK VEVK
Sbjct: 128 TELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVK 187
Query: 184 RAIP---KELTPGSNRSPVVGYNYGMSRASGFLNSYTQSY-NMSPLGSY 225
RA P K TPG S G S A+G+ Q++ SP G +
Sbjct: 188 RAEPRDSKSQTPGPPGSNQWGSRAMQSTANGWTGQPPQTWQGYSPQGMW 236
BLAST of CmaCh06G008510 vs. Swiss-Prot
Match:
DAZP1_MOUSE (DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=1 SV=2)
HSP 1 Score: 177.9 bits (450), Expect = 2.6e-43
Identity = 104/280 (37.14%), Postives = 150/280 (53.57%), Query Frame = 1
Query: 4 DLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVAERV 63
++GKLF+GG+ W T +E LR YF YGEVV+ VI++D++T ++RGFGFV F DP V
Sbjct: 8 EIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67
Query: 64 ILEK-HIIDGRTVEAKKAVPKDDQNTLNRNNGSIHGSPIS--GRTKKIFVGGLASTVTEA 123
+ + H +DGR ++ K P+ Q R P S ++ KIFVGG+ E
Sbjct: 68 LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGET 127
Query: 124 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMVEVKR 183
+ ++YF +FG +T+VV++YD QRPRGFGFIT++ E++VD ++ FH++ GK VEVKR
Sbjct: 128 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 187
Query: 184 AIP---KELTPGSNRSPVVGYNYGMSRASGFLN----SYTQSYNM--------SPLGSYG 243
A P K PG + G S A+G+ ++ Q Y +G YG
Sbjct: 188 AEPRDSKNQAPGQPGASQWGSRVAPSAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGYG 247
Query: 244 VRADGRLSPVFSSRTGIPHFGTNNYGVGVNLEQGLRQGYG 266
GR +P + + G QG QGYG
Sbjct: 248 PPPAGRGAP--PPPPPFTSYIVSTPPGGFPPPQGFPQGYG 285
BLAST of CmaCh06G008510 vs. TrEMBL
Match:
A0A0A0L293_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G062570 PE=4 SV=1)
HSP 1 Score: 829.3 bits (2141), Expect = 2.4e-237
Identity = 418/482 (86.72%), Postives = 442/482 (91.70%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
MESDLGKLFIGGISWDTDEERLR+YFG YGEVVEAVI+RDR+TGRARGFGFVVFADP VA
Sbjct: 1 MESDLGKLFIGGISWDTDEERLREYFGHYGEVVEAVIMRDRTTGRARGFGFVVFADPGVA 60
Query: 61 ERVILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGSIHGSPISGRTKKIFVGGLASTVTEA 120
ERVIL+KH+IDGRTVEAKKAVPKDDQN LNR++GSIHGSP SGRTKKIFVGGLASTVTEA
Sbjct: 61 ERVILDKHVIDGRTVEAKKAVPKDDQNMLNRSSGSIHGSPSSGRTKKIFVGGLASTVTEA 120
Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMVEVKR 180
DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEE VD VLHKTFHELNGKMVEVKR
Sbjct: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVKR 180
Query: 181 AIPKELTPGSNRSPVVGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGRLSPVFSSRT 240
AIPKELTPG NRSP+VGYNYGMSR SGFLNSYTQ YNMSPLG YGVR DGRLSP+ SSRT
Sbjct: 181 AIPKELTPGPNRSPLVGYNYGMSRPSGFLNSYTQGYNMSPLGGYGVRPDGRLSPIISSRT 240
Query: 241 GIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRFITPIGYSGG 300
G+PHFGT NYGVGVNLEQG+RQGYGR+LNIMNSQAQEQMLNSYYNGNSNR+I PIGYSGG
Sbjct: 241 GVPHFGTANYGVGVNLEQGMRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYIAPIGYSGG 300
Query: 301 NGRGDSLLSSSTWNVWGNGSMNNAMNSPNPGAFSGSGMGNFRVAYGNNDDNWSSAAVGNH 360
NGRGDS LSSSTWNVWGNGSM+NAM+S PGAFSGSG GNFRVAYGNNDDNWSS AV NH
Sbjct: 301 NGRGDSPLSSSTWNVWGNGSMSNAMSSSGPGAFSGSGTGNFRVAYGNNDDNWSSPAVANH 360
Query: 361 VGVNAPPGYT--NNNGYGIGESE-FGIRGGGYGRNGVVSSVATQKAFAETTDGYERSYRE 420
VG N PGYT NNNGY IG++ FG R GGYGRNGVVS+VA +KAF E +GYERSYR+
Sbjct: 361 VGANV-PGYTFGNNNGYAIGDNNGFGFR-GGYGRNGVVSNVAARKAFVEMNNGYERSYRD 420
Query: 421 LYRDGTVHDDSTWPSTTPELDGSVPFGYGLGSLASDDPAKSSENFLASYDVSSRQPSRGI 480
LYRD VHDDSTW ST PELDGSV FGYGLG+LASDDPAKSSE+FLASYDVSSRQ +RGI
Sbjct: 421 LYRDEAVHDDSTWQSTAPELDGSVSFGYGLGNLASDDPAKSSESFLASYDVSSRQSTRGI 480
BLAST of CmaCh06G008510 vs. TrEMBL
Match:
F6HEM8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g01660 PE=4 SV=1)
HSP 1 Score: 634.8 bits (1636), Expect = 8.5e-179
Identity = 317/479 (66.18%), Postives = 385/479 (80.38%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
MESDLGKLFIGGISWDTDE+RL++YF +YGEVVEAVI+RDR+TGRARGFGFVVFADPAVA
Sbjct: 1 MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60
Query: 61 ERVILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGSIHGSPISGRTKKIFVGGLASTVTEA 120
ERV+++KH+IDGRTVEAKKAVP+DDQ+ LNRN GSIHGSP GRTKKIFVGGLASTVTE+
Sbjct: 61 ERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTES 120
Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMVEVKR 180
DF+KYFDQFGTI DVVVMYDH+TQRPRGFGFITYDSEEAV+ VLHKTFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKR 180
Query: 181 AIPKELTPGSNRSPVVGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGRLSPVFSSRT 240
A+PKE +PG +RSP+VGYNYG+ R + FLN+Y Q YNMS +GSYG+R DGR +PV S R+
Sbjct: 181 AVPKEHSPGPSRSPLVGYNYGLGRNNNFLNNYGQGYNMSSVGSYGIRMDGRFNPVASGRS 240
Query: 241 GIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRFITPIGYSGG 300
G P FG YG+G+NLEQGL Y + + N+ ++LN YY+GNSNR+ TPIGY+ G
Sbjct: 241 GFPPFGAPGYGMGMNLEQGLSPSYSGNSSFSNNPGYGRILNPYYSGNSNRYSTPIGYNAG 300
Query: 301 NGRGDSLLSSSTWNVWGNGSMNNAMNSPNPGAFSGSGMGNFRVAYGNNDDNWSSAAVGNH 360
NGR DS+L+S+ NVWGNGS+NNA N +PGA+ GSG GNF V++GN NW S+ +
Sbjct: 301 NGRSDSVLNSTPRNVWGNGSLNNATNPASPGAYLGSGGGNFGVSFGNGGANWGSSPIPAQ 360
Query: 361 VGVNAPPGYTNNNGYGIGESEFGIRGGGYGRNGVVSSVATQKAFAETTDGYERSYRELYR 420
G +A + + YG G+S +G+ GGGYGRN + VA +FA +T GYE SY ELYR
Sbjct: 361 GGGSALGFTSGSLNYGSGDSSYGLGGGGYGRNS-STGVAAASSFAPSTGGYEGSYEELYR 420
Query: 421 DGTVHDDSTWPSTTPELDGSVPFGYGLGSLASDDPAKSSENFLASYDVSSRQPSRGIAA 480
G+V++DSTW + T ELDG F YGLG+ ASD A S+E+++ SY V++RQ +RGIAA
Sbjct: 421 SGSVYNDSTWRTPTSELDGPGSFSYGLGNAASDVTANSAEDYIGSYSVANRQSNRGIAA 478
BLAST of CmaCh06G008510 vs. TrEMBL
Match:
A5C205_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003519 PE=4 SV=1)
HSP 1 Score: 630.2 bits (1624), Expect = 2.1e-177
Identity = 314/476 (65.97%), Postives = 382/476 (80.25%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
MESDLGKLFIGGISWDTDE+RL++YF +YGEVVEAVI+RDR+TGRARGFGFVVFADPAVA
Sbjct: 1 MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60
Query: 61 ERVILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGSIHGSPISGRTKKIFVGGLASTVTEA 120
ERV+++KH+IDGRTVEAKKAVP+DDQ+ LNRN GSIHGSP GRTKKIFVGGLASTVTE+
Sbjct: 61 ERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTES 120
Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMVEVKR 180
DF+KYFDQFGTI DVVVMYDH+TQRPRGFGFITYDSEEAV+ VLHKTFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKR 180
Query: 181 AIPKELTPGSNRSPVVGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGRLSPVFSSRT 240
A+PKE +PG +RSP+VGYNYG+ R + FLN+Y Q YNMS +GSYG+R DGR +PV S R+
Sbjct: 181 AVPKEHSPGPSRSPLVGYNYGLGRNNNFLNNYGQGYNMSSVGSYGIRMDGRFNPVASGRS 240
Query: 241 GIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRFITPIGYSGG 300
G P FG YG+G+NLEQGL Y + + N+ ++LN YY+GNSNR+ TPIGY+ G
Sbjct: 241 GFPPFGAPGYGMGMNLEQGLSPSYSGNSSFSNNPGYGRILNPYYSGNSNRYSTPIGYNAG 300
Query: 301 NGRGDSLLSSSTWNVWGNGSMNNAMNSPNPGAFSGSGMGNFRVAYGNNDDNWSSAAVGNH 360
NGR DS+L+S+ NVWGNGS+NNA N +PGA+ GSG GNF V++GN NW S+ +
Sbjct: 301 NGRSDSVLNSTPRNVWGNGSLNNATNPASPGAYLGSGGGNFGVSFGNGGANWGSSPIPAQ 360
Query: 361 VGVNAPPGYTNNNGYGIGESEFGIRGGGYGRNGVVSSVATQKAFAETTDGYERSYRELYR 420
G +A + + YG G+S +G+ GGGYGRN + VA +FA +T GYE SY ELYR
Sbjct: 361 GGGSALGFTSGSLNYGSGDSSYGLGGGGYGRNS-STGVAAASSFAPSTGGYEGSYEELYR 420
Query: 421 DGTVHDDSTWPSTTPELDGSVPFGYGLGSLASDDPAKSSENFLASYDVSSRQPSRG 477
G+V++DSTW + T ELDG F YGLG+ ASD A S+E+++ SY V++RQ +RG
Sbjct: 421 SGSVYNDSTWRTPTSELDGPGSFSYGLGNAASDVTANSAEDYIGSYSVANRQSNRG 475
BLAST of CmaCh06G008510 vs. TrEMBL
Match:
A0A067KWB0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00990 PE=4 SV=1)
HSP 1 Score: 628.2 bits (1619), Expect = 8.0e-177
Identity = 322/482 (66.80%), Postives = 382/482 (79.25%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
MESDLGKLFIGGISWDTDEERL++YF YGEVVEAVI+RDR+TGRARGFGFVVFADPAVA
Sbjct: 1 MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60
Query: 61 ERVILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGSIHGSPISGRTKKIFVGGLASTVTEA 120
ERVI++KH+IDGRTVEAKKAVP+DDQ+ LNRN +IHGSP GRTKKIFVGGLASTVT++
Sbjct: 61 ERVIMDKHMIDGRTVEAKKAVPRDDQHILNRNTSNIHGSPGPGRTKKIFVGGLASTVTDS 120
Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMVEVKR 180
DF+KYF+QFG I DVVVMYDH+TQRPRGFGFITYDSE+AVD VLHKTFHELNGKMVEVKR
Sbjct: 121 DFKKYFEQFGNINDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKR 180
Query: 181 AIPKELTPGSNRSPVVGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGRLSPVFSSRT 240
A+PKEL+PG NRSP++GYNYG+SR + FLN+Y Q YNMS +G +G+R D R SP+ S R+
Sbjct: 181 AVPKELSPGPNRSPLIGYNYGLSRTNNFLNAYAQGYNMSSVGGFGMRMDSRFSPLASGRS 240
Query: 241 GIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRFITPIGYSGG 300
G P FG YG+G+NLE GL YG N NS ++L+ YY+GNS+R+ TPIGY G
Sbjct: 241 GFPPFGNTGYGMGMNLEPGLSPNYGGGSNFGNSPGYGRLLSPYYSGNSSRYSTPIGYGVG 300
Query: 301 NGRGDSLLSSSTWNVWGNGSMNNAMNSPNPGAFSGSGMGNFRVAYGNNDDNWSSAAVGNH 360
N R DS+LS +T NVWGNG +N A N +PGAF GSG GNF V++GNN NW V
Sbjct: 301 NARNDSVLSPTTRNVWGNGGLNTAANPASPGAFLGSGNGNFGVSFGNNGANWGGPHVSAQ 360
Query: 361 VGVNAPPGYTNNN-GYGI-GESEFGIRGGGYGRN-GVVSSVATQKAFAETTDGYERSYRE 420
G +A GYT+ + GYG G+S +G+ GGGYGRN G V+ A +FA +T YE SY +
Sbjct: 361 GGGSA-SGYTSGSMGYGSGGDSNYGLGGGGYGRNSGTVA--APTSSFAGSTGEYEGSYGD 420
Query: 421 LYRDGTVHDDSTWPSTTPELDGSVPFGYGLGSLASDDPAKSSENFLASYDVSSRQPSRGI 480
LYR G+V+ DSTW S TPELDGS FGYGLG++ASD KSSE ++ SY V+SRQ +RGI
Sbjct: 421 LYRSGSVYGDSTWRSGTPELDGSGSFGYGLGNIASDVTTKSSEGYIGSYGVTSRQSNRGI 479
BLAST of CmaCh06G008510 vs. TrEMBL
Match:
B9SSS5_RICCO (Heterogeneous nuclear ribonucleoprotein 27C, putative OS=Ricinus communis GN=RCOM_0046640 PE=4 SV=1)
HSP 1 Score: 624.0 bits (1608), Expect = 1.5e-175
Identity = 312/477 (65.41%), Postives = 377/477 (79.04%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
MESDLGKLFIGGISWDTDEERL++YF YGEVVEAVI+RDR+TGRARGFGFVVFADPAVA
Sbjct: 1 MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60
Query: 61 ERVILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGSIHGSPISGRTKKIFVGGLASTVTEA 120
ERVI++KH+IDGRTVEAKKAVP+DDQ+ LNRN SIHGSP GRTKKIFVGGLASTVT+
Sbjct: 61 ERVIVDKHMIDGRTVEAKKAVPRDDQHILNRNTSSIHGSPGPGRTKKIFVGGLASTVTDN 120
Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMVEVKR 180
DF+KYF+QFG ITDVVVMYDH+TQRPRGFGFITYDSE+AVD VLHKTFHELNGKMVEVKR
Sbjct: 121 DFKKYFEQFGNITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKR 180
Query: 181 AIPKELTPGSNRSPVVGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGRLSPVFSSRT 240
A+PKEL+PG +RSP++GYNYG+SR + FLN+Y Q YNM+ +G +G+R D R SP+ S R+
Sbjct: 181 AVPKELSPGPSRSPLIGYNYGLSRTNNFLNAYAQGYNMNSVGGFGMRMDSRFSPLASGRS 240
Query: 241 GIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRFITPIGYSGG 300
G P FGT YG+ +NLE GL YG N NS +ML+ YY+GNS+R+ TPIGY G
Sbjct: 241 GFPPFGTTGYGMSMNLEPGLTPSYGGGSNFGNSPGYGRMLSPYYSGNSSRYSTPIGYGVG 300
Query: 301 NGRGDSLLSSSTWNVWGNGSMNNAMNSPNPGAFSGSGMGNFRVAYGNNDDNWSSAAVGNH 360
N R DS+LS +T NVWGNG +N+A N +PGAF GSG G+F V++GN+ NW + V
Sbjct: 301 NARNDSVLSPTTRNVWGNGGLNSAANPASPGAFLGSGSGSFGVSFGNSGTNWGPSHVSAQ 360
Query: 361 VGVNAPPGYTNNNGYGIGESEFGIRGGGYGRNGVVSSVATQKAFAETTDGYERSYRELYR 420
G +A + + GYG G+S +G+ GG YGRN S+ A +FA + GYE SY +LYR
Sbjct: 361 GGGSASAYTSGSMGYGSGDSSYGLGGGAYGRNN-GSNAAPNSSFAGSNSGYEGSYGDLYR 420
Query: 421 DGTVHDDSTWPSTTPELDGSVPFGYGLGSLASDDPAKSSENFLASYDVSSRQPSRGI 478
G+V+ DSTW S TPEL+GS FGYGL ++A+D AKSSE ++ SY V+SRQ +RGI
Sbjct: 421 SGSVYGDSTWRSGTPELEGSGSFGYGLSNIAADVTAKSSEGYIGSYGVTSRQSNRGI 476
BLAST of CmaCh06G008510 vs. TAIR10
Match:
AT3G07810.2 (AT3G07810.2 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 473.8 bits (1218), Expect = 1.3e-133
Identity = 272/496 (54.84%), Postives = 340/496 (68.55%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
M+SD GKLFIGGISWDT+EERL++YF S+GEV+EAVI++DR+TGRARGFGFVVFADPAVA
Sbjct: 1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60
Query: 61 ERVILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGS-IHGSPIS-GRTKKIFVGGLASTVT 120
E VI EKH IDGR VEAKKAVP+DDQN +NR+N S I GSP GRT+KIFVGGL S+VT
Sbjct: 61 EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVT 120
Query: 121 EADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMVEV 180
E+DF+ YF+QFGT TDVVVMYDH+TQRPRGFGFITYDSEEAV+ VL KTFHELNGKMVEV
Sbjct: 121 ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEV 180
Query: 181 KRAIPKELTPGSNRSPV-VGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGRLSPVFS 240
KRA+PKEL+PG +RSP+ GY+YG++R + LN Y Q +N + +G YG+R DGR SPV +
Sbjct: 181 KRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGA 240
Query: 241 SRTGIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRFITPIGY 300
R+G ++ ++ YG+ VN +QGL G+ N + + ++ YY GN+NRF +GY
Sbjct: 241 GRSGFANY-SSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFGPAVGY 300
Query: 301 SGGNGRGD-SLLSSSTWNVWGNGS----MNNAMNSPNPGAFSGSGMGNFRVA--YGNNDD 360
GGNG G+ S SS T N+WGN NN NS + GS GN ++ +GN+
Sbjct: 301 EGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGV 360
Query: 361 NWSSAAVGNHVGVNAPPGYTNNNGY-GIGESEFGIRGGGY-----GRNGVVSSVATQKAF 420
NW + GN NA GY G GES FG+ GGY G N S + A
Sbjct: 361 NWGAPGGGN----NAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSAS 420
Query: 421 AETTDGYERS-YRELYRDGTVHDDSTWPSTTPELDGSVPFGYGLGS--LASDDPAKSSE- 477
A GY+ + E Y +G V+ D TW S TPE +G PF YG+G +SD A+SS
Sbjct: 421 ATNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSP 480
BLAST of CmaCh06G008510 vs. TAIR10
Match:
AT4G26650.1 (AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 416.0 bits (1068), Expect = 3.1e-116
Identity = 252/500 (50.40%), Postives = 324/500 (64.80%), Query Frame = 1
Query: 3 SDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVAER 62
SDLGKLFIGGISWDTDEERL++YFG YG++VEAVI+RDR+TGRARGFGF+VFADP+VAER
Sbjct: 12 SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71
Query: 63 VILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGSIH-------GSPISGRTKKIFVGGLAS 122
VI++KHIIDGRTVEAKKAVP+DDQ L R+ +H G+ RTKKIFVGGL S
Sbjct: 72 VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 131
Query: 123 TVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKM 182
++TEA+F+ YFDQFGTI DVVVMYDH+TQRPRGFGFIT+DSEE+VD+VLHKTFHELNGKM
Sbjct: 132 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 191
Query: 183 VEVKRAIPKELTPGS-NRSPVVGY--NYGM----SRASGFLNSYTQSYNMSPLGSYGVRA 242
VEVKRA+PKEL+ + NRSP++GY NYG+ S A+ + NS+ YN + LGS
Sbjct: 192 VEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNNLGS----- 251
Query: 243 DGRLSPVFSSRTGIPHFGTNNYGVGVNLEQGLRQGY-GRSLNIMNSQAQEQMLNSYYNGN 302
GR SP+ S R +++G+G+N E L + G +L N Y+N
Sbjct: 252 AGRFSPIGSGRNAF-----SSFGLGLNQELNLNSNFDGNTLGYSRIPG-----NQYFNSA 311
Query: 303 S-NRFITPIGYSGGNGRGDSLLSSSTWNVWGNGSMNNAMNSPNPGAFSGSGMGNFRVAYG 362
S NR+ +PIGY+ RGDS + S ++WGN S +S PG N V+ G
Sbjct: 312 SPNRYNSPIGYN----RGDSAYNPSNRDLWGNRS-----DSSGPG-------WNLGVSVG 371
Query: 363 NNDDNWSSAAVGNHVGVNAPPGYTNNNGYGIGESEFGIRGGGYGRNGVVSSVATQKAFAE 422
NN NW ++V ++NNGYG G G G +G+ +FA
Sbjct: 372 NNRGNWGLSSV-----------VSDNNGYGRS------YGAGSGLSGL--------SFAG 431
Query: 423 TTDGYERSYRELYRDGTVHDDSTWPSTTP------ELDG-SVPFGYGLGSLASDDPAKSS 480
T+G++ S ELYR +V+ DSTW + P ELDG S +G+G+ ++ SD A +S
Sbjct: 432 NTNGFDGSIGELYRGSSVYSDSTWQQSMPHHQSSNELDGLSRSYGFGIDNVGSDPSANAS 455
BLAST of CmaCh06G008510 vs. TAIR10
Match:
AT5G55550.3 (AT5G55550.3 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 383.6 bits (984), Expect = 1.7e-106
Identity = 252/503 (50.10%), Postives = 316/503 (62.82%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
MESDLGKLFIGGISWDTDEERLRDYF +YG+VVEAVI+RDR+TGRARGFGF+VFADP V+
Sbjct: 1 MESDLGKLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVS 60
Query: 61 ERVILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGSIH-GSPI---SGRTKKIFVGGLAST 120
ERVI++KHIIDGRTVEAKKAVP+DDQ L R+ IH SP+ GRTKKIFVGGL S+
Sbjct: 61 ERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPIHLMSPVHGGGGRTKKIFVGGLPSS 120
Query: 121 VTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMV 180
+TE +F+ YFDQFGTI DVVVMYDH+TQRPRGFGFIT+DS++AVD VLHKTFHELNGK+V
Sbjct: 121 ITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHELNGKLV 180
Query: 181 EVKRAIPKELTPGSN-RSPVV-GYNYGMSRASGFLNSYTQSYNMSP-----LGSYGVRAD 240
EVKRA+PKE++P SN RSP+ G NYG NSY ++ P LG G
Sbjct: 181 EVKRAVPKEISPVSNIRSPLASGVNYGGGSNRMPANSYFNNFAPGPGFYNSLGPVG---- 240
Query: 241 GRLSPVF-SSRTGIPHFGTN-NYGVGVNLE---QGLRQGYGRSLNIMNSQAQEQMLNSYY 300
R SPV S R + FG N+ + +NL G +G N + S N Y+
Sbjct: 241 RRFSPVIGSGRNAVSAFGLGLNHDLSLNLNPSCDGTSSTFG--YNRIPS-------NPYF 300
Query: 301 NGNS-NRFITPIGYSGGNGRGDSLLSSSTWNVWGNGSMNNAMNSPNPGAFSGSGMGNFRV 360
NG S NR+ +PIG++ R +S +S+ ++WGN + ++ PG N V
Sbjct: 301 NGASPNRYTSPIGHN----RTESPYNSNNRDLWGNRT-----DTAGPG-------WNLNV 360
Query: 361 AYGNNDDNW---SSAAVGNHVGVNAPPGYTNNNGYGIGESEFGIRGGGYGRNGVVSSVAT 420
+ GNN NW SS+AV N +NN G+GRN SS +
Sbjct: 361 SNGNNRGNWGLPSSSAVSN-----------DNN--------------GFGRNYGTSSGLS 420
Query: 421 QKAFAETTDGYERSYRELYRDGTVHDDSTW-----PS-TTPELDG-SVPFGYGLGSLASD 477
F +G+E S ELYR G+V+ DSTW PS ++ ELD S +GY + ++ SD
Sbjct: 421 SSPF----NGFEGSIGELYRGGSVYSDSTWQQQQLPSQSSHELDNLSRAYGYDIDNVGSD 445
BLAST of CmaCh06G008510 vs. TAIR10
Match:
AT5G47620.4 (AT5G47620.4 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 337.8 bits (865), Expect = 1.1e-92
Identity = 223/505 (44.16%), Postives = 290/505 (57.43%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
ME + KLFIGGISW+T E+RLRDYF S+GEV+EAVI++DR+TGRARGFGFVVFADP VA
Sbjct: 1 MEMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVA 60
Query: 61 ERVILEKHIIDGR----------------------TVEAKKAVPKDDQNTLNRNNGSIHG 120
ERV+L KHIIDG+ VEAKKAVP+DD N++N S+ G
Sbjct: 61 ERVVLLKHIIDGKILVDSIVYNQLCRSDKCISLSEVVEAKKAVPRDDHVVFNKSNSSLQG 120
Query: 121 SPISGRTKKIFVGGLASTVTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEE 180
SP +KKIFVGGLAS+VTEA+F+KYF QFG ITDVVVMYDH TQRPRGFGFI+YDSEE
Sbjct: 121 SPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEE 180
Query: 181 AVDLVLHKTFHELNGKMVEVKRAIPKELTPGSNRSPVVGYNYGMSRASGFLNSYTQSYNM 240
AVD VL KTFHELNGKMVEVK A+PK++ + R+ + ++G SR S LN YTQ ++
Sbjct: 181 AVDKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSP 240
Query: 241 SPLGSYGVRADGRLSPVFSSRTGIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQ 300
SP+ YGV+ + R SP +R G FG + YG+ +N E Q YG +S +
Sbjct: 241 SPISGYGVKPEVRYSPAVGNRGGFSPFG-HGYGIELNFEPNQTQNYGSG----SSGGFGR 300
Query: 301 MLNSYYNGNSNRFITPIGYSGGN-GRGDSLLSSSTWNVWGNGSMNNAMNSP-NPGAFSG- 360
+ Y + RF + + G + G G L ++ ++WGNG + NSP + +FSG
Sbjct: 301 PFSPGYAASLGRFGSQMESGGASVGNGSVLNAAPKNHLWGNGGLGYMSNSPISRSSFSGN 360
Query: 361 SGMGNFRVAYGNNDDNWSSAAVGNHVGVNAPPGYTNNNGYGIG-ESEFGIRGGGYGRNGV 420
SGM + G+ DNW + A A Y G G+G E+ G+ GGY
Sbjct: 361 SGMSSL----GSIGDNWGTVA-------RARSSYHGERG-GVGLEAMRGVHVGGYS---- 420
Query: 421 VSSVATQKAFAETTDGYERSYRELYRDGTVHDDSTWPSTTPELDGSVPFGYGLGSLASDD 480
S + +++ DS W S L G G+G L D
Sbjct: 421 -------------------SGSSILEADSLYSDSMWLS----LPAKAEEGLGMGPL--DF 453
BLAST of CmaCh06G008510 vs. TAIR10
Match:
AT4G14300.1 (AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein)
HSP 1 Score: 243.8 bits (621), Expect = 2.1e-64
Identity = 165/452 (36.50%), Postives = 235/452 (51.99%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
M+SD GKLF+GGISW+TDE++LR++F +YGEV +A+++RD+ TGR RGFGFV+F+DP+V
Sbjct: 1 MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60
Query: 61 ERVILEKHIIDGRTVEAKKAVPKDDQN----TLNRNNGSIHGSPISGRTKKIFVGGLAST 120
+RV+ EKH ID R V+ K+A+ +++Q T N N G +TKKIFVGGL T
Sbjct: 61 DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPT 120
Query: 121 VTEADFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMV 180
+T+ +F++YF+ +G +TDV +MYD +T RPRGFGF+++DSE+AVD VLHKTFH+L+GK V
Sbjct: 121 LTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQV 180
Query: 181 EVKRAIPKELTPGSNRSPVVGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGRLSPVF 240
EVKRA+PK+ PG G S G Y Q Y + G R
Sbjct: 181 EVKRALPKDANPGGG---------GRSMGGGGSGGY-QGYGGNESSYDGRMDSNRFLQHQ 240
Query: 241 SSRTGIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRFITPIG 300
S G+P +G++ YG GYG N A Y G + G
Sbjct: 241 SVGNGLPSYGSSGYGA----------GYGNGSNGAGYGA--------YGGYT-------G 300
Query: 301 YSGGNGRGDSLLSSSTWNVWGNGSMNNAMNSPNPGAFSGSGMGNFRVAYGNNDDNWSSAA 360
+GG G G + +T N+ G G ++ +P + + G YG+ +
Sbjct: 301 SAGGYGAGATAGYGAT-NIPGAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSGYGV 360
Query: 361 VGNHVGVNAPPGYTNNNGYGIGESEFGIRGGGYGRNGVVSSVATQKAFAETTDGYERSYR 420
G +P GY +N GYG G + GYG V + + + + Y
Sbjct: 361 PGAAPPTQSPSGY-SNQGYGYG--GYSGSDSGYGNQAAYGVVGGRPSGGGSNNPGSGGYM 401
Query: 421 ELYRDGTVHDDSTWPSTTPELDGSVPFGYGLG 449
G + D +W S + GYG G
Sbjct: 421 -----GGGYGDGSWRSDPSQ-------GYGGG 401
BLAST of CmaCh06G008510 vs. NCBI nr
Match:
gi|659096408|ref|XP_008449079.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cucumis melo])
HSP 1 Score: 830.1 bits (2143), Expect = 2.0e-237
Identity = 417/482 (86.51%), Postives = 442/482 (91.70%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
MESDLGKLFIGGISWDTDEERLR+YFG YGEVVEAVI+RDR+TGRARGFGFVVFADP VA
Sbjct: 1 MESDLGKLFIGGISWDTDEERLREYFGQYGEVVEAVIMRDRTTGRARGFGFVVFADPGVA 60
Query: 61 ERVILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGSIHGSPISGRTKKIFVGGLASTVTEA 120
ERVIL+KH+IDGRTVEAKKAVPKDDQN LNRN+GSIHGSP SGRTKKIFVGGLASTVTEA
Sbjct: 61 ERVILDKHVIDGRTVEAKKAVPKDDQNMLNRNSGSIHGSPGSGRTKKIFVGGLASTVTEA 120
Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMVEVKR 180
DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEE VD VLHKTFHELNGKMVEVKR
Sbjct: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVKR 180
Query: 181 AIPKELTPGSNRSPVVGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGRLSPVFSSRT 240
AIPKELTPG NRSP+VGYNYGMSR SGFLNSYTQ YNMSPLG YGVR DGRLSP+ SSRT
Sbjct: 181 AIPKELTPGPNRSPLVGYNYGMSRPSGFLNSYTQGYNMSPLGGYGVRPDGRLSPIISSRT 240
Query: 241 GIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRFITPIGYSGG 300
G+PHFGT NYGVGVNLEQG+RQGYGR+LN+MNSQAQEQMLNSYYNGNSNR+I PIGYSGG
Sbjct: 241 GVPHFGTANYGVGVNLEQGMRQGYGRTLNVMNSQAQEQMLNSYYNGNSNRYIAPIGYSGG 300
Query: 301 NGRGDSLLSSSTWNVWGNGSMNNAMNSPNPGAFSGSGMGNFRVAYGNNDDNWSSAAVGNH 360
NGRGDS LSSSTWNVWGNGSM+NAM+S PG FSGSG GNFRVAYGNNDDNW+S AV NH
Sbjct: 301 NGRGDSPLSSSTWNVWGNGSMSNAMSSSGPGTFSGSGTGNFRVAYGNNDDNWNSPAVANH 360
Query: 361 VGVNAPPGYT--NNNGYGIGESE-FGIRGGGYGRNGVVSSVATQKAFAETTDGYERSYRE 420
VG N PGYT NNNGY IG++ FG R GGYGRNGVVS+VA +KAF ET +GYERSYR+
Sbjct: 361 VGANV-PGYTFGNNNGYAIGDNNGFGFR-GGYGRNGVVSNVAARKAFVETNNGYERSYRD 420
Query: 421 LYRDGTVHDDSTWPSTTPELDGSVPFGYGLGSLASDDPAKSSENFLASYDVSSRQPSRGI 480
LYRD VHDDSTW ST PELDGSV FGYGLG+LASDDPAKSSE+FLASYDVSSRQ +RGI
Sbjct: 421 LYRDEVVHDDSTWQSTAPELDGSVSFGYGLGNLASDDPAKSSESFLASYDVSSRQSTRGI 480
BLAST of CmaCh06G008510 vs. NCBI nr
Match:
gi|449463715|ref|XP_004149577.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus])
HSP 1 Score: 829.3 bits (2141), Expect = 3.4e-237
Identity = 418/482 (86.72%), Postives = 442/482 (91.70%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
MESDLGKLFIGGISWDTDEERLR+YFG YGEVVEAVI+RDR+TGRARGFGFVVFADP VA
Sbjct: 1 MESDLGKLFIGGISWDTDEERLREYFGHYGEVVEAVIMRDRTTGRARGFGFVVFADPGVA 60
Query: 61 ERVILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGSIHGSPISGRTKKIFVGGLASTVTEA 120
ERVIL+KH+IDGRTVEAKKAVPKDDQN LNR++GSIHGSP SGRTKKIFVGGLASTVTEA
Sbjct: 61 ERVILDKHVIDGRTVEAKKAVPKDDQNMLNRSSGSIHGSPSSGRTKKIFVGGLASTVTEA 120
Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMVEVKR 180
DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEE VD VLHKTFHELNGKMVEVKR
Sbjct: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEECVDRVLHKTFHELNGKMVEVKR 180
Query: 181 AIPKELTPGSNRSPVVGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGRLSPVFSSRT 240
AIPKELTPG NRSP+VGYNYGMSR SGFLNSYTQ YNMSPLG YGVR DGRLSP+ SSRT
Sbjct: 181 AIPKELTPGPNRSPLVGYNYGMSRPSGFLNSYTQGYNMSPLGGYGVRPDGRLSPIISSRT 240
Query: 241 GIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRFITPIGYSGG 300
G+PHFGT NYGVGVNLEQG+RQGYGR+LNIMNSQAQEQMLNSYYNGNSNR+I PIGYSGG
Sbjct: 241 GVPHFGTANYGVGVNLEQGMRQGYGRTLNIMNSQAQEQMLNSYYNGNSNRYIAPIGYSGG 300
Query: 301 NGRGDSLLSSSTWNVWGNGSMNNAMNSPNPGAFSGSGMGNFRVAYGNNDDNWSSAAVGNH 360
NGRGDS LSSSTWNVWGNGSM+NAM+S PGAFSGSG GNFRVAYGNNDDNWSS AV NH
Sbjct: 301 NGRGDSPLSSSTWNVWGNGSMSNAMSSSGPGAFSGSGTGNFRVAYGNNDDNWSSPAVANH 360
Query: 361 VGVNAPPGYT--NNNGYGIGESE-FGIRGGGYGRNGVVSSVATQKAFAETTDGYERSYRE 420
VG N PGYT NNNGY IG++ FG R GGYGRNGVVS+VA +KAF E +GYERSYR+
Sbjct: 361 VGANV-PGYTFGNNNGYAIGDNNGFGFR-GGYGRNGVVSNVAARKAFVEMNNGYERSYRD 420
Query: 421 LYRDGTVHDDSTWPSTTPELDGSVPFGYGLGSLASDDPAKSSENFLASYDVSSRQPSRGI 480
LYRD VHDDSTW ST PELDGSV FGYGLG+LASDDPAKSSE+FLASYDVSSRQ +RGI
Sbjct: 421 LYRDEAVHDDSTWQSTAPELDGSVSFGYGLGNLASDDPAKSSESFLASYDVSSRQSTRGI 480
BLAST of CmaCh06G008510 vs. NCBI nr
Match:
gi|225460779|ref|XP_002274589.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Vitis vinifera])
HSP 1 Score: 634.8 bits (1636), Expect = 1.2e-178
Identity = 317/479 (66.18%), Postives = 385/479 (80.38%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
MESDLGKLFIGGISWDTDE+RL++YF +YGEVVEAVI+RDR+TGRARGFGFVVFADPAVA
Sbjct: 1 MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60
Query: 61 ERVILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGSIHGSPISGRTKKIFVGGLASTVTEA 120
ERV+++KH+IDGRTVEAKKAVP+DDQ+ LNRN GSIHGSP GRTKKIFVGGLASTVTE+
Sbjct: 61 ERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTES 120
Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMVEVKR 180
DF+KYFDQFGTI DVVVMYDH+TQRPRGFGFITYDSEEAV+ VLHKTFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKR 180
Query: 181 AIPKELTPGSNRSPVVGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGRLSPVFSSRT 240
A+PKE +PG +RSP+VGYNYG+ R + FLN+Y Q YNMS +GSYG+R DGR +PV S R+
Sbjct: 181 AVPKEHSPGPSRSPLVGYNYGLGRNNNFLNNYGQGYNMSSVGSYGIRMDGRFNPVASGRS 240
Query: 241 GIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRFITPIGYSGG 300
G P FG YG+G+NLEQGL Y + + N+ ++LN YY+GNSNR+ TPIGY+ G
Sbjct: 241 GFPPFGAPGYGMGMNLEQGLSPSYSGNSSFSNNPGYGRILNPYYSGNSNRYSTPIGYNAG 300
Query: 301 NGRGDSLLSSSTWNVWGNGSMNNAMNSPNPGAFSGSGMGNFRVAYGNNDDNWSSAAVGNH 360
NGR DS+L+S+ NVWGNGS+NNA N +PGA+ GSG GNF V++GN NW S+ +
Sbjct: 301 NGRSDSVLNSTPRNVWGNGSLNNATNPASPGAYLGSGGGNFGVSFGNGGANWGSSPIPAQ 360
Query: 361 VGVNAPPGYTNNNGYGIGESEFGIRGGGYGRNGVVSSVATQKAFAETTDGYERSYRELYR 420
G +A + + YG G+S +G+ GGGYGRN + VA +FA +T GYE SY ELYR
Sbjct: 361 GGGSALGFTSGSLNYGSGDSSYGLGGGGYGRNS-STGVAAASSFAPSTGGYEGSYEELYR 420
Query: 421 DGTVHDDSTWPSTTPELDGSVPFGYGLGSLASDDPAKSSENFLASYDVSSRQPSRGIAA 480
G+V++DSTW + T ELDG F YGLG+ ASD A S+E+++ SY V++RQ +RGIAA
Sbjct: 421 SGSVYNDSTWRTPTSELDGPGSFSYGLGNAASDVTANSAEDYIGSYSVANRQSNRGIAA 478
BLAST of CmaCh06G008510 vs. NCBI nr
Match:
gi|147783406|emb|CAN75218.1| (hypothetical protein VITISV_003519 [Vitis vinifera])
HSP 1 Score: 630.2 bits (1624), Expect = 3.0e-177
Identity = 314/476 (65.97%), Postives = 382/476 (80.25%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
MESDLGKLFIGGISWDTDE+RL++YF +YGEVVEAVI+RDR+TGRARGFGFVVFADPAVA
Sbjct: 1 MESDLGKLFIGGISWDTDEDRLKEYFRTYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60
Query: 61 ERVILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGSIHGSPISGRTKKIFVGGLASTVTEA 120
ERV+++KH+IDGRTVEAKKAVP+DDQ+ LNRN GSIHGSP GRTKKIFVGGLASTVTE+
Sbjct: 61 ERVVMDKHMIDGRTVEAKKAVPRDDQHLLNRNTGSIHGSPGPGRTKKIFVGGLASTVTES 120
Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMVEVKR 180
DF+KYFDQFGTI DVVVMYDH+TQRPRGFGFITYDSEEAV+ VLHKTFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGTINDVVVMYDHNTQRPRGFGFITYDSEEAVERVLHKTFHELNGKMVEVKR 180
Query: 181 AIPKELTPGSNRSPVVGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGRLSPVFSSRT 240
A+PKE +PG +RSP+VGYNYG+ R + FLN+Y Q YNMS +GSYG+R DGR +PV S R+
Sbjct: 181 AVPKEHSPGPSRSPLVGYNYGLGRNNNFLNNYGQGYNMSSVGSYGIRMDGRFNPVASGRS 240
Query: 241 GIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRFITPIGYSGG 300
G P FG YG+G+NLEQGL Y + + N+ ++LN YY+GNSNR+ TPIGY+ G
Sbjct: 241 GFPPFGAPGYGMGMNLEQGLSPSYSGNSSFSNNPGYGRILNPYYSGNSNRYSTPIGYNAG 300
Query: 301 NGRGDSLLSSSTWNVWGNGSMNNAMNSPNPGAFSGSGMGNFRVAYGNNDDNWSSAAVGNH 360
NGR DS+L+S+ NVWGNGS+NNA N +PGA+ GSG GNF V++GN NW S+ +
Sbjct: 301 NGRSDSVLNSTPRNVWGNGSLNNATNPASPGAYLGSGGGNFGVSFGNGGANWGSSPIPAQ 360
Query: 361 VGVNAPPGYTNNNGYGIGESEFGIRGGGYGRNGVVSSVATQKAFAETTDGYERSYRELYR 420
G +A + + YG G+S +G+ GGGYGRN + VA +FA +T GYE SY ELYR
Sbjct: 361 GGGSALGFTSGSLNYGSGDSSYGLGGGGYGRNS-STGVAAASSFAPSTGGYEGSYEELYR 420
Query: 421 DGTVHDDSTWPSTTPELDGSVPFGYGLGSLASDDPAKSSENFLASYDVSSRQPSRG 477
G+V++DSTW + T ELDG F YGLG+ ASD A S+E+++ SY V++RQ +RG
Sbjct: 421 SGSVYNDSTWRTPTSELDGPGSFSYGLGNAASDVTANSAEDYIGSYSVANRQSNRG 475
BLAST of CmaCh06G008510 vs. NCBI nr
Match:
gi|1009168399|ref|XP_015902638.1| (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Ziziphus jujuba])
HSP 1 Score: 629.4 bits (1622), Expect = 5.1e-177
Identity = 317/480 (66.04%), Postives = 386/480 (80.42%), Query Frame = 1
Query: 1 MESDLGKLFIGGISWDTDEERLRDYFGSYGEVVEAVIIRDRSTGRARGFGFVVFADPAVA 60
ME DLGKLFIGGISWDTDEERL++YF YGEVVEAVI+RDR+TGRARGFGFVVFADPAVA
Sbjct: 1 MEPDLGKLFIGGISWDTDEERLKEYFRKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60
Query: 61 ERVILEKHIIDGRTVEAKKAVPKDDQNTLNRNNGSIHGSPISGRTKKIFVGGLASTVTEA 120
ERVI++KH+IDGR VEAKKAVPKDDQ+ L+R+ G+IHGSP GRT+KIFVGGLASTVTE+
Sbjct: 61 ERVIIDKHMIDGRAVEAKKAVPKDDQHILSRSTGAIHGSPGPGRTRKIFVGGLASTVTES 120
Query: 121 DFQKYFDQFGTITDVVVMYDHSTQRPRGFGFITYDSEEAVDLVLHKTFHELNGKMVEVKR 180
DF+KYFDQFGTITDVVVMYDH+TQRPRGFGFITYDSEEAVD VLHKTFHELNGKMVEVKR
Sbjct: 121 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFHELNGKMVEVKR 180
Query: 181 AIPKELTPGSNRSPVVGYNYGMSRASGFLNSYTQSYNMSPLGSYGVRADGRLSPVFSSRT 240
A+PKEL+P +RSP++GYNY + R + FLNSY Q YN+SP+G +GVR D R +P+ SSR+
Sbjct: 181 AVPKELSPAPSRSPLIGYNYSLGRTNSFLNSYAQGYNLSPIGGFGVRMDDRFNPISSSRS 240
Query: 241 GIPHFGTNNYGVGVNLEQGLRQGYGRSLNIMNSQAQEQMLNSYYNGNSNRFITPIGYSGG 300
G F T YG+G+NLE GL YG + N +S +ML+ YYN N +R+ TPIGY+ G
Sbjct: 241 GFSPFNTAGYGMGLNLEPGLTSNYGGNSNFGSSLGYARMLSPYYNANPSRYNTPIGYNAG 300
Query: 301 NGRGDSLLSSSTWNVWGNGSMNNAMNSPNPGAFSGSGMGNFRVAYGNNDDNWSSAAVGNH 360
NGR +SLLSS+T NVWGNG ++NA N +PGA+ SG G+F V++GN+ NW V N
Sbjct: 301 NGRTNSLLSSTTRNVWGNGGISNATNPTSPGAYLNSGSGSFGVSFGNSGSNWGPTPVSNP 360
Query: 361 VGVNAPPGYTNNNGYGIGESEFGIRGGGYGRN-GVVSSVATQKAFAETTDGYERSYRELY 420
G +A GYT+ + YG G+S FG+ GGGYGRN G V VA ++ +T G+E SY +LY
Sbjct: 361 GGGSA-SGYTSGSSYGSGDSGFGLGGGGYGRNSGTV--VAPTSSYPGSTAGFEGSYGDLY 420
Query: 421 RDGTVHDDSTWPSTTPELDGSVPFGYGLGSLASDDPAKSSENFLASYDVSSRQPSRGIAA 480
R+G+V+ D+TW STTPELDGS FGYGLG +ASD +K SE+++ SY+V+SRQ +RGIAA
Sbjct: 421 RNGSVYGDATWRSTTPELDGSSTFGYGLGGIASDVTSKGSEDYIGSYNVTSRQSNRGIAA 477
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| RNP1_ARATH | 3.8e-63 | 36.50 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana GN=RNP1 PE=1 S... | [more] |
| RBP1_ARATH | 2.2e-47 | 45.93 | RNA-binding protein 1 OS=Arabidopsis thaliana GN=RBP1 PE=2 SV=1 | [more] |
| MSIR6_DROME | 2.3e-44 | 40.94 | RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster GN=Rbp6 PE=2... | [more] |
| DAZP1_XENLA | 1.5e-43 | 41.92 | DAZ-associated protein 1 OS=Xenopus laevis GN=dazap1 PE=1 SV=1 | [more] |
| DAZP1_MOUSE | 2.6e-43 | 37.14 | DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=1 SV=2 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L293_CUCSA | 2.4e-237 | 86.72 | Uncharacterized protein OS=Cucumis sativus GN=Csa_3G062570 PE=4 SV=1 | [more] |
| F6HEM8_VITVI | 8.5e-179 | 66.18 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g01660 PE=4 SV=... | [more] |
| A5C205_VITVI | 2.1e-177 | 65.97 | Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003519 PE=4 SV=1 | [more] |
| A0A067KWB0_JATCU | 8.0e-177 | 66.80 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00990 PE=4 SV=1 | [more] |
| B9SSS5_RICCO | 1.5e-175 | 65.41 | Heterogeneous nuclear ribonucleoprotein 27C, putative OS=Ricinus communis GN=RCO... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G07810.2 | 1.3e-133 | 54.84 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
| AT4G26650.1 | 3.1e-116 | 50.40 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
| AT5G55550.3 | 1.7e-106 | 50.10 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
| AT5G47620.4 | 1.1e-92 | 44.16 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
| AT4G14300.1 | 2.1e-64 | 36.50 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
