CmaCh06G002900 (gene) Cucurbita maxima (Rimu)

NameCmaCh06G002900
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionLAC12
LocationCma_Chr06 : 1394766 .. 1396386 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAATCAAAGAGAGAAAAGAGGAGAGATTCGTGAAGAGTTTATACAAAAGGCAGGTTTTATTTGTTCTAAAGAAAACAGAGAAAGGAAACAGAGTAAAGGAAACCCACTCTGTTTCCTTAAAACAGAGCACACACGACGAAGAGGGATAAAGAAAGGAATCTGGGGATGTTTTAAATTTACAAACATTGAAGAAAGAACAAAAGGAAAACCCAGAAATCAACACTTTGGAAGATCGGCTGGCGGCGGCCGTAGTTTCTGGTCGGATTTTGGGCCGTCGAGGACAATCCATGCCATTCTCAGCCCCCAGCTCGTGTGGACGTCAAAATGGCAGTGCATGAACCAAACCCCTGTTAACCAAAATTTGAATGTGATATAAAAATGGAACATTCTGAATGGTGAAAGACAAATTGTTACCTCACCTGGGTTATCGGCGTAGAAACGGAAGGCCAACCAGCCGCCGGCGGGAACGCCGGCAGTGTTCCTCTCAACCGGGTCAACCAGATTGAAATTAGCTGGATCCTTATTCATGTCGAAATTCCCAAAACCTTCTCCGACTATAAAGAAATTATATCCATGAAGATGGAGCGGATGACTCTCTGCCCCCAGAATACTCGTCCCCTGTAAAACGACTTCCACGCTCGCATTAAACGGCAGCACTACCACACTCGTACTGTTACTCACAAATGTATTATTGAGCGGCACTCCGGTGTAGTTGAAGGGAAAAACCGGCTTGCCGGAAAATTAGTTCGGTAAACCCCATTAGTCCGGCGGGAGAAATACGCCTGCAGAATCGCCGTCTTCGGCAGGGCAAAAGAGACATTATTAACAGCGGCAGCGAATTTCGTACCGTTGGGACCTTGACACGTGACGTTTTTCGGACATGGGGCAGTTCCAAGTCCGACGGTGAAGAAAAATTTCCTGTCGACGGTTTGTGGGACATTGGCAGGGAATTTAGCATTAGCAAGAGACCGGAATTTCCTCGAGAAATTGGCGACGAAATTCGTGTCGTTAATTGCCGGGAGATTGGGAAGTTGAGTGGTCGGAGTTGGGGTGGTGGGTGAGTCGCCGTACTGGAGGATTCCGATGGTGGTGGAATTGTCGAAAGTACCCTGGCCAGTGAAGTACGGTCGAGCCGCCATGAGGAAACTGGCGTTGGTGAAATTGGGATTTGTTTTGAGAAGAACATTGGAGGTTTGGCCGGGGGTGAGCAATATCACGTTCGTTTGGAAGGGCTTGACGTAAACGGCGTCGGCGTCGACGACGGTCAGAGAATGGTTGGCGATGGTGAAGAAAAGCTCGTCGTTGAGTGCAGCGTTGATTAATCGGAGTAGGTATGTTTTTCCAGGCTTCACTTTTAGCTTGAATGTATCTGAAAATCAAAATTTAATCATTTTTAGTGTGAAATAAACAAGATTAATGGAGGGATTAAAGTGATTACCGTTAGAAGAGGAGCAATTATAAAGAGGGCCAGGGAGTCCATTAATGGTGTACGCATCAGAAACATTCGGCGCTCCTCCGGTCTGCAGCGCCTGCTGAATCACACTCTCCGGCTTCACATTGAACCACTCACCGAAAATGATTGGGGCTTCTCTGTGGGGCTTCTCGAACGGATATGA

mRNA sequence

ATGAAGAATCAAAGAGAGAAAAGAGGAGAGATTCGTGAAGAGTTTATACAAAAGGCAGAAAGAACAAAAGGAAAACCCAGAAATCAACACTTTGGAAGATCGGCTGGCGGCGGCCGTAGTTTCTGGTCGGATTTTGGGCCGTCGAGGACAATCCATGCCATTCTCAGCCCCCAGCTCGTGTGGACGTCAAAATGGCAGTGCATGAACCAAACCCCTGTTAACCAAAATTTGAATACAAATTGTTACCTCACCTGGGTTATCGGCGTAGAAACGGAAGGCCAACCAGCCGCCGGCGGGAACGCCGGCAGTGTTCCTCTCAACCGGGTCAACCAGATTGAAATTAGCTGGATCCTTATTCATGTCGAAATTCCCAAAACCTTCTCCGACTATAAAGAAATTATATCCATGAAGATGGAGCGGATGACTCTCTGCCCCCAGAATACTCGTCCCCTTCCGGCGGGAGAAATACGCCTGCAGAATCGCCGTCTTCGGCAGGGCAAAAGAGACATTATTAACAGCGGCAGCGAATTTCGTACCGTTGGGACCTTGACACGTGACGTTTTTCGGACATGGGGCAGTTCCAAGTCCGACGGTGAAGAAAAATTTCCTGTCGACGGTTTGTGGGACATTGGCAGGGAATTTAGCATTAGCAAGAGACCGGAATTTCCTCGAGAAATTGGCGACGAAATTCGTGTCGTTAATTGCCGGGAGATTGGGAAGTTGAGTGGTCGGAGTTGGGGTGGTGGTACCCTGGCCAGTGAAGTACGGTCGAGCCGCCATGAGGAAACTGGCGTTGGTGAAATTGGGATTTGTTTTGAGAAGAACATTGGAGGTTTGGCCGGGGGTGAGCAATATCACGTTCGTTTGGAAGGGCTTGACGTAAACGGCGTCGGCGTCGACGACGGTCAGAGAATGGTTGGCGATGGTGAAGAAAAGCTCGTCGTTGAGTGCAGCTGTGAAATAAACAAGATTAATGGAGGGATTAAAGTGATTACCGTTAGAAGAGGAGCAATTATAAAGAGGGCCAGGGAGTCCATTAATGGTGTACGCATCAGAAACATTCGGCGCTCCTCCGGTCTGCAGCGCCTGCTGAATCACACTCTCCGGCTTCACATTGAACCACTCACCGAAAATGATTGGGGCTTCTCTGTGGGGCTTCTCGAACGGATATGA

Coding sequence (CDS)

ATGAAGAATCAAAGAGAGAAAAGAGGAGAGATTCGTGAAGAGTTTATACAAAAGGCAGAAAGAACAAAAGGAAAACCCAGAAATCAACACTTTGGAAGATCGGCTGGCGGCGGCCGTAGTTTCTGGTCGGATTTTGGGCCGTCGAGGACAATCCATGCCATTCTCAGCCCCCAGCTCGTGTGGACGTCAAAATGGCAGTGCATGAACCAAACCCCTGTTAACCAAAATTTGAATACAAATTGTTACCTCACCTGGGTTATCGGCGTAGAAACGGAAGGCCAACCAGCCGCCGGCGGGAACGCCGGCAGTGTTCCTCTCAACCGGGTCAACCAGATTGAAATTAGCTGGATCCTTATTCATGTCGAAATTCCCAAAACCTTCTCCGACTATAAAGAAATTATATCCATGAAGATGGAGCGGATGACTCTCTGCCCCCAGAATACTCGTCCCCTTCCGGCGGGAGAAATACGCCTGCAGAATCGCCGTCTTCGGCAGGGCAAAAGAGACATTATTAACAGCGGCAGCGAATTTCGTACCGTTGGGACCTTGACACGTGACGTTTTTCGGACATGGGGCAGTTCCAAGTCCGACGGTGAAGAAAAATTTCCTGTCGACGGTTTGTGGGACATTGGCAGGGAATTTAGCATTAGCAAGAGACCGGAATTTCCTCGAGAAATTGGCGACGAAATTCGTGTCGTTAATTGCCGGGAGATTGGGAAGTTGAGTGGTCGGAGTTGGGGTGGTGGTACCCTGGCCAGTGAAGTACGGTCGAGCCGCCATGAGGAAACTGGCGTTGGTGAAATTGGGATTTGTTTTGAGAAGAACATTGGAGGTTTGGCCGGGGGTGAGCAATATCACGTTCGTTTGGAAGGGCTTGACGTAAACGGCGTCGGCGTCGACGACGGTCAGAGAATGGTTGGCGATGGTGAAGAAAAGCTCGTCGTTGAGTGCAGCTGTGAAATAAACAAGATTAATGGAGGGATTAAAGTGATTACCGTTAGAAGAGGAGCAATTATAAAGAGGGCCAGGGAGTCCATTAATGGTGTACGCATCAGAAACATTCGGCGCTCCTCCGGTCTGCAGCGCCTGCTGAATCACACTCTCCGGCTTCACATTGAACCACTCACCGAAAATGATTGGGGCTTCTCTGTGGGGCTTCTCGAACGGATATGA

Protein sequence

MKNQREKRGEIREEFIQKAERTKGKPRNQHFGRSAGGGRSFWSDFGPSRTIHAILSPQLVWTSKWQCMNQTPVNQNLNTNCYLTWVIGVETEGQPAAGGNAGSVPLNRVNQIEISWILIHVEIPKTFSDYKEIISMKMERMTLCPQNTRPLPAGEIRLQNRRLRQGKRDIINSGSEFRTVGTLTRDVFRTWGSSKSDGEEKFPVDGLWDIGREFSISKRPEFPREIGDEIRVVNCREIGKLSGRSWGGGTLASEVRSSRHEETGVGEIGICFEKNIGGLAGGEQYHVRLEGLDVNGVGVDDGQRMVGDGEEKLVVECSCEINKINGGIKVITVRRGAIIKRARESINGVRIRNIRRSSGLQRLLNHTLRLHIEPLTENDWGFSVGLLERI
BLAST of CmaCh06G002900 vs. TrEMBL
Match: A0A151QWA8_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_044381 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.2e-07
Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 1

Query: 84  TWVIGVETEGQPAAGGNAGSVPLNRVNQIEISWILIHVEIPKTFSDYKEIISMKMERMTL 143
           TWVI  +++  PA   N  SVPLNRVNQI++  + + V + K  S+ KE+I+MKM+ + L
Sbjct: 1   TWVICKKSKSNPATSRNTSSVPLNRVNQIKLCRVFVGVIVSKPLSNNKEVIAMKMQGVAL 60

Query: 144 CPQNTRPL 152
            P+NT  L
Sbjct: 61  SPKNTSTL 68

BLAST of CmaCh06G002900 vs. NCBI nr
Match: gi|1012322319|gb|KYP34648.1| (hypothetical protein KK1_044381, partial [Cajanus cajan])

HSP 1 Score: 65.1 bits (157), Expect = 3.1e-07
Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 1

Query: 84  TWVIGVETEGQPAAGGNAGSVPLNRVNQIEISWILIHVEIPKTFSDYKEIISMKMERMTL 143
           TWVI  +++  PA   N  SVPLNRVNQI++  + + V + K  S+ KE+I+MKM+ + L
Sbjct: 1   TWVICKKSKSNPATSRNTSSVPLNRVNQIKLCRVFVGVIVSKPLSNNKEVIAMKMQGVAL 60

Query: 144 CPQNTRPL 152
            P+NT  L
Sbjct: 61  SPKNTSTL 68

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A151QWA8_CAJCA2.2e-0745.59Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_044381 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|1012322319|gb|KYP34648.1|3.1e-0745.59hypothetical protein KK1_044381, partial [Cajanus cajan][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G002900.1CmaCh06G002900.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh06G002900Carg01056Silver-seed gourdcarcmaB0216
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh06G002900Wax gourdcmawgoB0986
CmaCh06G002900Wax gourdcmawgoB1032
CmaCh06G002900Wax gourdcmawgoB1039
CmaCh06G002900Cucurbita maxima (Rimu)cmacmaB278
CmaCh06G002900Cucurbita maxima (Rimu)cmacmaB435
CmaCh06G002900Cucurbita maxima (Rimu)cmacmaB490
CmaCh06G002900Cucurbita maxima (Rimu)cmacmaB501
CmaCh06G002900Cucurbita maxima (Rimu)cmacmaB520
CmaCh06G002900Cucurbita maxima (Rimu)cmacmaB553
CmaCh06G002900Cucumber (Gy14) v1cgycmaB0107
CmaCh06G002900Cucumber (Gy14) v1cgycmaB0506
CmaCh06G002900Cucurbita moschata (Rifu)cmacmoB792
CmaCh06G002900Cucurbita moschata (Rifu)cmacmoB815
CmaCh06G002900Cucurbita moschata (Rifu)cmacmoB818
CmaCh06G002900Cucurbita moschata (Rifu)cmacmoB821
CmaCh06G002900Cucurbita moschata (Rifu)cmacmoB826
CmaCh06G002900Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G002900Cucurbita moschata (Rifu)cmacmoB836
CmaCh06G002900Wild cucumber (PI 183967)cmacpiB824
CmaCh06G002900Wild cucumber (PI 183967)cmacpiB827
CmaCh06G002900Wild cucumber (PI 183967)cmacpiB852
CmaCh06G002900Wild cucumber (PI 183967)cmacpiB858
CmaCh06G002900Cucumber (Chinese Long) v2cmacuB812
CmaCh06G002900Cucumber (Chinese Long) v2cmacuB815
CmaCh06G002900Cucumber (Chinese Long) v2cmacuB837
CmaCh06G002900Cucumber (Chinese Long) v2cmacuB842
CmaCh06G002900Melon (DHL92) v3.5.1cmameB777
CmaCh06G002900Melon (DHL92) v3.5.1cmameB749
CmaCh06G002900Melon (DHL92) v3.5.1cmameB750
CmaCh06G002900Melon (DHL92) v3.5.1cmameB755
CmaCh06G002900Watermelon (Charleston Gray)cmawcgB726
CmaCh06G002900Watermelon (Charleston Gray)cmawcgB734
CmaCh06G002900Watermelon (Charleston Gray)cmawcgB735
CmaCh06G002900Watermelon (Charleston Gray)cmawcgB736
CmaCh06G002900Watermelon (97103) v1cmawmB788
CmaCh06G002900Watermelon (97103) v1cmawmB793
CmaCh06G002900Watermelon (97103) v1cmawmB806
CmaCh06G002900Watermelon (97103) v1cmawmB807
CmaCh06G002900Cucurbita pepo (Zucchini)cmacpeB809
CmaCh06G002900Cucurbita pepo (Zucchini)cmacpeB821
CmaCh06G002900Cucurbita pepo (Zucchini)cmacpeB829
CmaCh06G002900Cucurbita pepo (Zucchini)cmacpeB830
CmaCh06G002900Cucurbita pepo (Zucchini)cmacpeB845
CmaCh06G002900Cucurbita pepo (Zucchini)cmacpeB852
CmaCh06G002900Bottle gourd (USVL1VR-Ls)cmalsiB745
CmaCh06G002900Bottle gourd (USVL1VR-Ls)cmalsiB750
CmaCh06G002900Bottle gourd (USVL1VR-Ls)cmalsiB754
CmaCh06G002900Bottle gourd (USVL1VR-Ls)cmalsiB756
CmaCh06G002900Cucumber (Gy14) v2cgybcmaB140
CmaCh06G002900Cucumber (Gy14) v2cgybcmaB428
CmaCh06G002900Cucumber (Gy14) v2cgybcmaB561
CmaCh06G002900Cucumber (Gy14) v2cgybcmaB697
CmaCh06G002900Cucumber (Gy14) v2cgybcmaB855
CmaCh06G002900Melon (DHL92) v3.6.1cmamedB849
CmaCh06G002900Melon (DHL92) v3.6.1cmamedB850
CmaCh06G002900Melon (DHL92) v3.6.1cmamedB855
CmaCh06G002900Melon (DHL92) v3.6.1cmamedB878
CmaCh06G002900Silver-seed gourdcarcmaB0817
CmaCh06G002900Silver-seed gourdcarcmaB1277
CmaCh06G002900Silver-seed gourdcarcmaB1388
CmaCh06G002900Cucumber (Chinese Long) v3cmacucB0963
CmaCh06G002900Cucumber (Chinese Long) v3cmacucB0966
CmaCh06G002900Cucumber (Chinese Long) v3cmacucB0989
CmaCh06G002900Cucumber (Chinese Long) v3cmacucB0992
CmaCh06G002900Cucumber (Chinese Long) v3cmacucB0998
CmaCh06G002900Watermelon (97103) v2cmawmbB844
CmaCh06G002900Watermelon (97103) v2cmawmbB851
CmaCh06G002900Watermelon (97103) v2cmawmbB854
CmaCh06G002900Watermelon (97103) v2cmawmbB855
CmaCh06G002900Watermelon (97103) v2cmawmbB870