CmaCh06G002400 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAGGAAATCAAGCAAGCGGGTCAGCTTCAGTCCTGATGTGAATGATAACCCAACAGTCGTGCTCAAACACGGCGGCGGTGACGACGGCGCTGGAATTTTGAGCTTCGGCCTGAGCAGAGACACAAGGCACTTGCCGGTGGGATTTCTACAGAGTTTCAAGGCCAGAGTAAGTGAAGCCATTCGCTTTGTATCCACCAGAAAATCTTCACGAAAGGTTTCTTCAGCCGCCACTTTTACAAGGTCAAGATCGGTTTCGGATTCCATGGAGTCGCACCGAGCTGAAGCAATCGAAGATTGCATCGAATTCTTAAACCACTCTTCATCTTTGTCCAGATTAAATTCAGTCTCTGGAAGTACTTACTGAAAGTTCTGTAATCGTGGGACCGGAACGCATGTAAAATATAGTCGATATTTTAGACATTCTTTTGCGTGCCCGTCTCTGTAAGATGATGCTGTAGCAGATGATAATCGAGTTTCAGTCTTCGAAGCTCGAAACTTTTCTTGTCTAAATGCCTTGAGCTCGAGCAGATATCTGTTCATTATAAAATTACATAAATTGGATATCTACAATATATCACTCGATGAGGTAAAAAAAAAAAAAATGAACATATAAGTTTATTTCACTGAGTTATTTTTGTTCAATGATGTCCACCATTAAACGCCTAAATTATGGCATCTCCAAAAGGAGGGAATGGGATAGACAACAAGAATCTCTATGCGTGATATGTCGGGTCATAAATTTTTAGAAGGCAACAGTTAGAAAGGGATGAGTTAGACCTGTGAATTTTGAGGGCCACGCCTTTGAATAGCTCAGATTCCCATTAGCAAGGATGGTTGGTTGATTCACAATCAGGGGGGCCACCTGTAAAACCCCAGTTTGTCCAAACATTTGCATATGAAAAACATAGAAACATGCAGACCGACATGCAGTAAAATGCCCTTAGAAAATGTGTAATGCTCAAAATGATTTTCCTTTCTTGTTTTTGTTTGAGGTATGCATGGGGGTGGGGTTCATGTCCATGGAAATTATGAAGGATGATTAAGACTCGTGCGGGATAATCTCGTGCTTATCACAATACATCTTAATCTTTATGTATTTCAGTTAAAATAATCCAAATCAAGATCCACAGCATTTCTTTTTTTTTTTTACAAAAATAGGACAGAGACTGAGAGGGGGGGAGGGAGAAATGATTGCTGTTTCTTAATAATTACCGGTCCATCCCAAATCAACTTTGCAGGTTATCTAACATTGAATAGCACAATCCGGAATCCAAGGAAGGTTCAGTTCTCGAATTCCTTCACTGGAAGGTCTTCTTCATTTCAAGAGCCCTGTTGTAAGGAGGGGCACTAGGAGGTTGCACAGGATCAAAGTTCCCTCGGCACCTCTGGGCAGTGGGTATGAACGATCGGAATCATATCCGCTGAGGGGATACTTTATTGGGTCCTCCCAGCCACCCACTACTGCAATCTGAGAGGGACACAATGCAGCAAAATAGCAATGCTATTACTTCCTCTTGTGTAACCAAAAATATCAGGGAATTGATCACATTGAAATCAGAGACACTAATTATATGAAGTTTAAAGACAAGAAGACATGGTCATAGCCAGCTGTAAAACATATTAATCTTTAAAGAACAAGAACATGTTGTATCACGTCCTTCGATATGTGAACTCCCAATCAAGGTCGTACATCGAGTTTACCTAAGTCATCTCCTCCTGATGGGCTTCCCACCTTTTCTAGCAGGGGTTGGATCTTATGGGTTGAAACCCTCAGGAGGCGAATAATTCTCACAAACTACAAATGCCTCAACATTCACACCCAGTCCACGTATGGGCTTCAACATGAACATAAAGTTAAATCATAGTCACTACTTTGTTTAAAAGTTAAATGATGCCAAATAATCACTTGTAAGTTGTAACTAGTTATAGTTTAATCAGCCTGACACGTCAACATTTGAGCAATTGTATTAAACGACCGACTACCTAGAATCAAATAGAACAATTCACGGTTGTAATTCAAAACTTTTTAATGTCCATAAACATAACCATCGAAGTTTTAGAAAATATGTGAGCTGCCTTTTGACTATCTTGTCCTCTTTTACATGTTTTTTTTTTTTATATTACAGATGCCACCACGAACATAAGCAAACCCCACAATTTGGTGTTGGGTGGACACGAGTCCCACATAGTATTAAACGATAACAATCTAAAGTTCAATGGGATCTGAAATCCATGCGTAAGAATCCTATGAACCAGACGCTATAATGACAATTTTCACTTAGAAGGGTATTATTTTCAGGAAATAAGTTCAATTATAACCGAAAGATAGACCTTTAGAGTTACCAATAAAAAAAGTGAAGCCAAAAGGTTACCTATACTGGAATTGCGACTGCCTTTCGGTCTTGCAAAAGTCACTACGGGAAAAGCAACTTCAGCTGCAACAAAAAAAAAAAAAAAAAAAACTCGAAAATGTAAAACAACAGAGACCTAGCTTTGATTATGGTCCTCACGCAATTCATTATAATACTTGACAAGTTTTACCAATGCTAAACATGTCAAAAATAATCTACACGTCAAAGCAATAATCTCAAGGAACAGAGGAGATCACAGCAAACCTTTCAACTTGACTGACTAAGAAAAAAAGAAACTAGATGAGAAGAGAGATTCATATTGCAGAATTCTTGTAAGAATTAGTTGTATTTTATATGAAAAATTGTATTTCCCCCATAAAGCATTGTCCACTAGTTTGATGAACAGATTGCAACAAGAAGACACCCAAAAGAGATTACCTAGCTCCAGCTACCAGGGGCTCCAGCTACTATTCTGTTATGGAAGGTTAATCCAAAATATTGCGGCATTGTTCACGAGGGAATAATGACATCTCCAGGACATAGAACTCCTAAAAAACAAAGGAAATTAGTATTCTTGGAAAGGAATATTTAGTACCAATTACCATTCATCTGGACCATCTCAGTGATTGACATCCTAGCAGAAAGGTAAAAATATTTTAAGAGAGAGGAGCCCAACACAAGAACAAACCTTCAAATATGTTAATTCTTCATCTATTTTCAGAAGTTTGAACGCACTTCGAGCACGCCAGCCTTCTTCTTTTGCTTTACTATAGTATATATTCTGCAAACGAGACAAAGTAAATAATAAAACGTGGAAAAAGGTAACGAACCAAAAGGACAAATAGCCGAATAGAATTGTAGTCAAGACCCTCTTATCTCTTGAAGCTTGGCCCATGACTGAAGGATCAAGAAAGTTACAGCAGGTCACCAAGCCTTACAGCAACAACCCAATTGGAGCTTCAAATTCCTAA ATGACAAGGAAATCAAGCAAGCGGGTCAGCTTCAGTCCTGATGTGAATGATAACCCAACAGTCGTGCTCAAACACGGCGGCGGTGACGACGGCGCTGGAATTTTGAGCTTCGGCCTGAGCAGAGACACAAGGCACTTGCCGGTGGGATTTCTACAGAGTTTCAAGGCCAGAGTAAGTGAAGCCATTCGCTTTGTATCCACCAGAAAATCTTCACGAAAGGTTTCTTCAGCCGCCACTTTTACAAGGTCAAGATCGGTTTCGGATTCCATGGAGTCGCACCGAGCTGAAGCAATCGAAGATTGCATCGAATTCTTAAACCACTCTTCATCTTTGTCCAGATTAAATTCAGTCTCTGGAAGTTATCTAACATTGAATAGCACAATCCGGAATCCAAGGAAGGTTCAGTTCTCGAATTCCTTCACTGGAAGGTCTTCTTCATTTCAAGAGCCCTGTTATTGCAACAAGAAGACACCCAAAAGAGATTACCTAGCTCCAGCTACCAGGGGCTCCAGCTACTATTCTGTTATGGAAGGATCAAGAAAGTTACAGCAGGTCACCAAGCCTTACAGCAACAACCCAATTGGAGCTTCAAATTCCTAA ATGACAAGGAAATCAAGCAAGCGGGTCAGCTTCAGTCCTGATGTGAATGATAACCCAACAGTCGTGCTCAAACACGGCGGCGGTGACGACGGCGCTGGAATTTTGAGCTTCGGCCTGAGCAGAGACACAAGGCACTTGCCGGTGGGATTTCTACAGAGTTTCAAGGCCAGAGTAAGTGAAGCCATTCGCTTTGTATCCACCAGAAAATCTTCACGAAAGGTTTCTTCAGCCGCCACTTTTACAAGGTCAAGATCGGTTTCGGATTCCATGGAGTCGCACCGAGCTGAAGCAATCGAAGATTGCATCGAATTCTTAAACCACTCTTCATCTTTGTCCAGATTAAATTCAGTCTCTGGAAGTTATCTAACATTGAATAGCACAATCCGGAATCCAAGGAAGGTTCAGTTCTCGAATTCCTTCACTGGAAGGTCTTCTTCATTTCAAGAGCCCTGTTATTGCAACAAGAAGACACCCAAAAGAGATTACCTAGCTCCAGCTACCAGGGGCTCCAGCTACTATTCTGTTATGGAAGGATCAAGAAAGTTACAGCAGGTCACCAAGCCTTACAGCAACAACCCAATTGGAGCTTCAAATTCCTAA MTRKSSKRVSFSPDVNDNPTVVLKHGGGDDGAGILSFGLSRDTRHLPVGFLQSFKARVSEAIRFVSTRKSSRKVSSAATFTRSRSVSDSMESHRAEAIEDCIEFLNHSSSLSRLNSVSGSYLTLNSTIRNPRKVQFSNSFTGRSSSFQEPCYCNKKTPKRDYLAPATRGSSYYSVMEGSRKLQQVTKPYSNNPIGASNS
BLAST of CmaCh06G002400 vs. TrEMBL
Match: A0A0A0LFD2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G732440 PE=4 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 5.5e-47 Identity = 107/121 (88.43%), Postives = 113/121 (93.39%), Query Frame = 1
BLAST of CmaCh06G002400 vs. TrEMBL
Match: A0A067EQR7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033106mg PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 7.7e-25 Identity = 74/123 (60.16%), Postives = 90/123 (73.17%), Query Frame = 1
BLAST of CmaCh06G002400 vs. TrEMBL
Match: V4S561_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013109mg PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 7.7e-25 Identity = 74/123 (60.16%), Postives = 90/123 (73.17%), Query Frame = 1
BLAST of CmaCh06G002400 vs. TrEMBL
Match: A0A061EQH2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021741 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.9e-24 Identity = 72/130 (55.38%), Postives = 94/130 (72.31%), Query Frame = 1
BLAST of CmaCh06G002400 vs. TrEMBL
Match: A5C5R3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g01950 PE=4 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.2e-23 Identity = 67/127 (52.76%), Postives = 87/127 (68.50%), Query Frame = 1
BLAST of CmaCh06G002400 vs. TAIR10
Match: AT5G01225.1 (AT5G01225.1 unknown protein) HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14 Identity = 58/132 (43.94%), Postives = 75/132 (56.82%), Query Frame = 1
BLAST of CmaCh06G002400 vs. TAIR10
Match: AT3G09032.1 (AT3G09032.1 unknown protein) HSP 1 Score: 71.2 bits (173), Expect = 7.9e-13 Identity = 62/147 (42.18%), Postives = 78/147 (53.06%), Query Frame = 1
BLAST of CmaCh06G002400 vs. NCBI nr
Match: gi|659083637|ref|XP_008442460.1| (PREDICTED: josephin-like protein [Cucumis melo]) HSP 1 Score: 196.8 bits (499), Expect = 3.5e-47 Identity = 107/121 (88.43%), Postives = 114/121 (94.21%), Query Frame = 1
BLAST of CmaCh06G002400 vs. NCBI nr
Match: gi|449439920|ref|XP_004137733.1| (PREDICTED: josephin-like protein [Cucumis sativus]) HSP 1 Score: 195.7 bits (496), Expect = 7.9e-47 Identity = 107/121 (88.43%), Postives = 113/121 (93.39%), Query Frame = 1
BLAST of CmaCh06G002400 vs. NCBI nr
Match: gi|567873447|ref|XP_006429313.1| (hypothetical protein CICLE_v10013109mg [Citrus clementina]) HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24 Identity = 74/123 (60.16%), Postives = 90/123 (73.17%), Query Frame = 1
BLAST of CmaCh06G002400 vs. NCBI nr
Match: gi|590628639|ref|XP_007026773.1| (Uncharacterized protein TCM_021741 [Theobroma cacao]) HSP 1 Score: 120.2 bits (300), Expect = 4.2e-24 Identity = 72/130 (55.38%), Postives = 94/130 (72.31%), Query Frame = 1
BLAST of CmaCh06G002400 vs. NCBI nr
Match: gi|743811967|ref|XP_011019145.1| (PREDICTED: josephin-like protein [Populus euphratica]) HSP 1 Score: 117.5 bits (293), Expect = 2.7e-23 Identity = 67/125 (53.60%), Postives = 87/125 (69.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |