CmaCh06G001820 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh06G001820
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCalcium-binding family protein
LocationCma_Chr06 : 925133 .. 925732 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACGGCGAAGCCTCATCGGAATCAGACGTTTCCCGACCACGGCTGTCGAAGAAACCGTCGAGTTCTTCTTCGTTCCAGCTCCGATGCCCTAGCCTGAACTCCCTCCGTCTCCGTCGCATATTCGACATGTTCGACAAGAACGGCGACGGCATGATCACCAGCGAGGAGCTGGGCCAAGCTCTGTCCCTGCTCGGCCTGGACGCGGAGGAATCCGAGCTGGATTCCACCGTCAACTCCTTCATCCAGACGGGAAATGAGGGGCTGAGATTTGAAGACTTCGCGGCGCTGCACCAGTCATTGAACGACGCCTACTTCGGCGGACAGGACGGGGAGGTGAATGAAGAGAATGAAGAAGAGAAGAGGATGTCGCAGGAGGAGTCGGATCTGACGGAGGCGTTCAGGGTGTTCGATGAGGACGGCGATGGGTACATTTCCGCGGCGGAGCTGCAGGTGGTGCTGAGGAAGCTGAGGTTGTCGGAAGGGAATGAGATCGATAGCGTTCAGAAGATGATCTTGTCCGTTGATCGTAATAAGGATGGACGAGTCGATTTCTTTGAGTTTAAGGACATGATGCGCAGTGTTATTGTCCGGACATGA

mRNA sequence

ATGGACGGCGAAGCCTCATCGGAATCAGACGTTTCCCGACCACGGCTGTCGAAGAAACCGTCGAGTTCTTCTTCGTTCCAGCTCCGATGCCCTAGCCTGAACTCCCTCCGTCTCCGTCGCATATTCGACATGTTCGACAAGAACGGCGACGGCATGATCACCAGCGAGGAGCTGGGCCAAGCTCTGTCCCTGCTCGGCCTGGACGCGGAGGAATCCGAGCTGGATTCCACCGTCAACTCCTTCATCCAGACGGGAAATGAGGGGCTGAGATTTGAAGACTTCGCGGCGCTGCACCAGTCATTGAACGACGCCTACTTCGGCGGACAGGACGGGGAGGTGAATGAAGAGAATGAAGAAGAGAAGAGGATGTCGCAGGAGGAGTCGGATCTGACGGAGGCGTTCAGGGTGTTCGATGAGGACGGCGATGGGTACATTTCCGCGGCGGAGCTGCAGGTGGTGCTGAGGAAGCTGAGGTTGTCGGAAGGGAATGAGATCGATAGCGTTCAGAAGATGATCTTGTCCGTTGATCGTAATAAGGATGGACGAGTCGATTTCTTTGAGTTTAAGGACATGATGCGCAGTGTTATTGTCCGGACATGA

Coding sequence (CDS)

ATGGACGGCGAAGCCTCATCGGAATCAGACGTTTCCCGACCACGGCTGTCGAAGAAACCGTCGAGTTCTTCTTCGTTCCAGCTCCGATGCCCTAGCCTGAACTCCCTCCGTCTCCGTCGCATATTCGACATGTTCGACAAGAACGGCGACGGCATGATCACCAGCGAGGAGCTGGGCCAAGCTCTGTCCCTGCTCGGCCTGGACGCGGAGGAATCCGAGCTGGATTCCACCGTCAACTCCTTCATCCAGACGGGAAATGAGGGGCTGAGATTTGAAGACTTCGCGGCGCTGCACCAGTCATTGAACGACGCCTACTTCGGCGGACAGGACGGGGAGGTGAATGAAGAGAATGAAGAAGAGAAGAGGATGTCGCAGGAGGAGTCGGATCTGACGGAGGCGTTCAGGGTGTTCGATGAGGACGGCGATGGGTACATTTCCGCGGCGGAGCTGCAGGTGGTGCTGAGGAAGCTGAGGTTGTCGGAAGGGAATGAGATCGATAGCGTTCAGAAGATGATCTTGTCCGTTGATCGTAATAAGGATGGACGAGTCGATTTCTTTGAGTTTAAGGACATGATGCGCAGTGTTATTGTCCGGACATGA

Protein sequence

MDGEASSESDVSRPRLSKKPSSSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQALSLLGLDAEESELDSTVNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNEENEEEKRMSQEESDLTEAFRVFDEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKDGRVDFFEFKDMMRSVIVRT
Homology
[Close]
BLAST of CmaCh06G001820 vs. Swiss-Prot
Match: ALLB3_BETPN (Calcium-binding allergen Bet v 3 OS=Betula pendula GN=BETVIII PE=1 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.8e-59
Identity = 126/198 (63.64%), Postives = 157/198 (79.29%), Query Frame = 1 

Query: 4   EASSESDVSRPRLSKKPSSSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQALS 63
           E +     S PR  K+  S+SSF+LR  SLN+LRLRRIFD+FDKN DG+IT +EL +AL+
Sbjct: 9   EKAGHGHASTPR--KRSLSNSSFRLRSESLNTLRLRRIFDLFDKNSDGIITVDELSRALN 68

Query: 64  LLGLDAEESELDSTVNSFIQTGNEGLRFEDFAALHQSLNDAYF--GGQDGEVNEENEEEK 123
           LLGL+ + SEL+STV SF + GN GL+FEDF +LHQSLND+YF  GG+D + NEE+  + 
Sbjct: 69  LLGLETDLSELESTVKSFTREGNIGLQFEDFISLHQSLNDSYFAYGGEDEDDNEEDMRKS 128

Query: 124 RMSQEESDLTEAFRVFDEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKDG 183
            +SQEE+D    F+VFDEDGDGYISA ELQ+VL KL  SEG+EID V+KMI+SVD N+DG
Sbjct: 129 ILSQEEADSFGGFKVFDEDGDGYISARELQMVLGKLGFSEGSEIDRVEKMIVSVDSNRDG 188

Query: 184 RVDFFEFKDMMRSVIVRT 200
           RVDFFEFKDMMRSV+VR+
Sbjct: 189 RVDFFEFKDMMRSVLVRS 204

[Close]
BLAST of CmaCh06G001820 vs. Swiss-Prot
Match: CML42_ARATH (Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.6e-55
Identity = 112/180 (62.22%), Postives = 146/180 (81.11%), Query Frame = 1 

Query: 18  KKPSSSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQALSLLGLDAEESELDST 77
           K    SSSF+LR PSLN+LRL+RIFD+FDKNGDG IT EEL QAL+ LGL+A+ S+L ST
Sbjct: 10  KVARQSSSFRLRSPSLNALRLQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKST 69

Query: 78  VNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNEENEEEKRMSQEESDLTEAFRVF 137
           V S+IQ GN GL F+DF++LH++L+D++FGG  G   E  ++    ++ ESDL EAF+VF
Sbjct: 70  VESYIQPGNTGLNFDDFSSLHKTLDDSFFGGACGG-GENEDDPSSAAENESDLAEAFKVF 129

Query: 138 DEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKDGRVDFFEFKDMMRSVIV 197
           DE+GDG+ISA ELQ VL+KL L EG E++ V+KMI+SVDRN+DGRVDFFEFK+MMR+V++
Sbjct: 130 DENGDGFISARELQTVLKKLGLPEGGEMERVEKMIVSVDRNQDGRVDFFEFKNMMRTVVI 188

[Close]
BLAST of CmaCh06G001820 vs. Swiss-Prot
Match: CAST_SOLTU (Calcium-binding protein CAST OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.2e-52
Identity = 119/194 (61.34%), Postives = 145/194 (74.74%), Query Frame = 1 

Query: 4   EASSESDVSRPRLSKKPSSSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQALS 63
           E   E   S  R   KPSSSSSF+LR PSLNS+RLRRIFD+FD+N D +I+ EEL QAL+
Sbjct: 7   ENKDEFKQSLTRGKLKPSSSSSFRLRSPSLNSIRLRRIFDVFDRNHDCLISVEELSQALN 66

Query: 64  LLGLDAEESELDSTVNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNEENEEEKRM 123
           LLGLDA+ SE++S V   I+  N GLRFEDF  LH+SLND +FG +  +    N +    
Sbjct: 67  LLGLDADLSEIESMVKLHIKPENTGLRFEDFETLHRSLNDVFFGSKCEDKLGLNPDP--- 126

Query: 124 SQEESDLTEAFRVFDEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKDGRV 183
           +Q+ESDL EAF VFDE+GDG+ISA ELQVVL KL L EG+EID V+ MI SV+++ DGRV
Sbjct: 127 AQDESDLKEAFDVFDENGDGFISAKELQVVLEKLGLPEGSEIDRVEMMISSVEQDHDGRV 186

Query: 184 DFFEFKDMMRSVIV 198
           DFFEFKDMMR+VIV
Sbjct: 187 DFFEFKDMMRTVIV 197

[Close]
BLAST of CmaCh06G001820 vs. Swiss-Prot
Match: CML43_ARATH (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 8.1e-52
Identity = 110/180 (61.11%), Postives = 136/180 (75.56%), Query Frame = 1 

Query: 18  KKPSSSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQALSLLGLDAEESELDST 77
           K    SSSF+LR PSLN+LRL R+FD+FDKN DG IT EEL QALS LGLDA+ S+L ST
Sbjct: 9   KLSRQSSSFRLRSPSLNALRLHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKST 68

Query: 78  VNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNEENEEEKRMSQEESDLTEAFRVF 137
           V+SFI+    GLRF+DFAALH++L++++FGG+    +            ESDL EAF VF
Sbjct: 69  VDSFIKPDKTGLRFDDFAALHKTLDESFFGGEGSCCD---------GSPESDLEEAFNVF 128

Query: 138 DEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKDGRVDFFEFKDMMRSVIV 197
           DEDGDG+ISA ELQ VL+KL L E  EI+ V+KMI+SVD N DGRVDFFEFK+MM++V+V
Sbjct: 129 DEDGDGFISAVELQKVLKKLGLPEAGEIEQVEKMIVSVDSNHDGRVDFFEFKNMMQTVVV 179

[Close]
BLAST of CmaCh06G001820 vs. Swiss-Prot
Match: CML27_ORYSJ (Probable calcium-binding protein CML27 OS=Oryza sativa subsp. japonica GN=CML27 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.6e-46
Identity = 103/186 (55.38%), Postives = 133/186 (71.51%), Query Frame = 1 

Query: 12  SRPRLSKKPSSSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQALSLLGLDAEE 71
           ++P LS+KPS S  F+LR  SLN+LRLRR+FD+FD+NGDG IT +E+  AL  LGL A+ 
Sbjct: 8   AKPSLSRKPSPS--FRLRNGSLNALRLRRVFDLFDRNGDGEITLDEMASALDALGLGADR 67

Query: 72  SELDSTVNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNEENEEEKRMSQEESDLT 131
           + L++TV  +I  G  GLRF DF ALH++L DA F    G V EE   ++    +E D+ 
Sbjct: 68  AGLEATVGGYIPAGAAGLRFGDFEALHRALGDALF----GPVEEEEPGKQGEDDDEGDMK 127

Query: 132 EAFRVFDEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKDGRVDFFEFKDM 191
           EAFRVFDEDGDG+ISAAELQ VL+KL L E   + +VQ+MI +VDR+ DGRVDF EFK M
Sbjct: 128 EAFRVFDEDGDGFISAAELQAVLKKLGLPEARNLATVQEMICNVDRDCDGRVDFGEFKCM 187

Query: 192 MRSVIV 198
           M+ + V
Sbjct: 188 MQGITV 187

[Close]
BLAST of CmaCh06G001820 vs. TrEMBL
Match: A0A0A0LA10_CUCSA (Calcium binding protein/cast OS=Cucumis sativus GN=Csa_3G727960 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 4.4e-81
Identity = 167/198 (84.34%), Postives = 180/198 (90.91%), Query Frame = 1 

Query: 9   SDVSRPRLSKKPSS-SSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQALSLLGL 68
           SDV RPRL+KKPSS SSSF+LRCPSLNSLRLRRIFDMFDKNGDGMIT++ELGQAL LLGL
Sbjct: 6   SDVPRPRLTKKPSSLSSSFRLRCPSLNSLRLRRIFDMFDKNGDGMITTDELGQALGLLGL 65

Query: 69  DAEESELDSTVNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNEENEEEKR----- 128
           DA+ESELDSTVNSFI+ GNEGLRFEDFAALHQSLND YFGG    V +E+E+EKR     
Sbjct: 66  DADESELDSTVNSFIEPGNEGLRFEDFAALHQSLNDTYFGGM---VEDEDEDEKRETSMS 125

Query: 129 -MSQEESDLTEAFRVFDEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKDG 188
            MSQEESDL+EAFRVFDEDGDGYISA ELQVVLRKLRL+EGNEID VQKMILSVDRN+DG
Sbjct: 126 SMSQEESDLSEAFRVFDEDGDGYISATELQVVLRKLRLAEGNEIDRVQKMILSVDRNQDG 185

Query: 189 RVDFFEFKDMMRSVIVRT 200
           RVDFFEFKDMMRSVIVR+
Sbjct: 186 RVDFFEFKDMMRSVIVRS 200

[Close]
BLAST of CmaCh06G001820 vs. TrEMBL
Match: B9T0Q0_RICCO (Calcium binding protein/cast, putative OS=Ricinus communis GN=RCOM_0126810 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.0e-61
Identity = 132/199 (66.33%), Postives = 163/199 (81.91%), Query Frame = 1 

Query: 1   MDGEASSESDVSRPRLSKKPSSSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQ 60
           M+ E ++ S  +RP LS+K S++SSF+LR PSLNSLRLRRIFD+FDKNGDGMIT ++L Q
Sbjct: 1   MEVEPAAASTGTRPTLSRKASTASSFRLRSPSLNSLRLRRIFDLFDKNGDGMITVQDLSQ 60

Query: 61  ALSLLGLDAEESELDSTVNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNEENEEE 120
           ALSLLGL+A+ SEL+ST+ S I+ GN+GL FEDF +LHQSL++A+F   D E+     + 
Sbjct: 61  ALSLLGLEADFSELESTIRSHIRPGNDGLAFEDFFSLHQSLDEAFFSYDDEEMEANGVD- 120

Query: 121 KRMSQEESDLTEAFRVFDEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKD 180
             ++QEESDLTEAF+VFDEDGDGYISA ELQVVLRKL + E  EI+ VQ+MI SVDRN D
Sbjct: 121 -AVTQEESDLTEAFKVFDEDGDGYISAHELQVVLRKLGMPEAKEIERVQQMICSVDRNHD 180

Query: 181 GRVDFFEFKDMMRSVIVRT 200
           GRVDFFEFKDMMRSV+VR+
Sbjct: 181 GRVDFFEFKDMMRSVLVRS 197

[Close]
BLAST of CmaCh06G001820 vs. TrEMBL
Match: A0A067JGC3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00615 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.3e-61
Identity = 131/189 (69.31%), Postives = 158/189 (83.60%), Query Frame = 1 

Query: 13  RPRLSKKPSSSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQALSLLGLDAEES 72
           +P L++K S+SSSF+LR PSLNSLRLRRIFD+FDKNGDGMIT E+L QAL+LLGLDA+ S
Sbjct: 8   KPCLTRKGSTSSSFRLRSPSLNSLRLRRIFDLFDKNGDGMITVEDLSQALTLLGLDADFS 67

Query: 73  ELDSTVNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNEENEEE--KRMSQEESDL 132
           EL+ST+ S I+ GN+GL FEDF ALHQSL+DA+        NE+N E+    +SQEESDL
Sbjct: 68  ELESTIRSHIKPGNDGLAFEDFVALHQSLDDAF------SSNEQNVEDAGDAISQEESDL 127

Query: 133 TEAFRVFDEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKDGRVDFFEFKD 192
           TEAF+VFDEDGDGYISA ELQVVLRKL + E  E+D +Q+MI+SVD N+DGRVDFFEFKD
Sbjct: 128 TEAFKVFDEDGDGYISAHELQVVLRKLGMPEAKELDRIQQMIISVDSNQDGRVDFFEFKD 187

Query: 193 MMRSVIVRT 200
           MMRSV+VR+
Sbjct: 188 MMRSVLVRS 190

[Close]
BLAST of CmaCh06G001820 vs. TrEMBL
Match: A0A061EPX4_THECC (Calmodulin like 42 OS=Theobroma cacao GN=TCM_019645 PE=4 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.9e-60
Identity = 134/210 (63.81%), Postives = 164/210 (78.10%), Query Frame = 1 

Query: 1   MDGEASSESDVS-----RPRLSKKPSSSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITS 60
           M+  A++ +D       +  LS+K SS+SSF+LRCPSLNSLRLRRIFD+FDKNGDGMIT 
Sbjct: 3   MEAAAAASADTGTDPQCKRSLSRKVSSTSSFRLRCPSLNSLRLRRIFDIFDKNGDGMITV 62

Query: 61  EELGQALSLLGLDAEESELDSTVNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNE 120
           +E+  ALSLLGL+A+ SEL ST+ SFI+ GN GL+FEDF ALHQSL+  +FG ++ +  E
Sbjct: 63  QEINLALSLLGLEADLSELHSTIKSFIEPGNIGLKFEDFVALHQSLDQTFFGLEEDDQEE 122

Query: 121 ENEE------EKRMSQEESDLTEAFRVFDEDGDGYISAAELQVVLRKLRLSEGNEIDSVQ 180
             E+      E +MSQE+SDLTEAF+VFDEDGDG+ISA ELQVVL KL L EG EID VQ
Sbjct: 123 GVEDTVCDGSEAKMSQEDSDLTEAFKVFDEDGDGFISAQELQVVLGKLGLPEGREIDRVQ 182

Query: 181 KMILSVDRNKDGRVDFFEFKDMMRSVIVRT 200
           +MI SVD+N DGRVDFFEFK MM+SVIVR+
Sbjct: 183 QMICSVDQNHDGRVDFFEFKHMMQSVIVRS 212

[Close]
BLAST of CmaCh06G001820 vs. TrEMBL
Match: Q6ZXI3_POPCA (Putative calmodulin-like protein OS=Populus canadensis PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.4e-58
Identity = 123/181 (67.96%), Postives = 146/181 (80.66%), Query Frame = 1 

Query: 23  SSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQALSLLGLDAEESELDSTVNSFI 82
           SSSF LRCPSLN LRLRRIFD+FDKNGDGMIT EE+ QALSLLGLDA+ S+L+ T+ S I
Sbjct: 13  SSSFSLRCPSLNFLRLRRIFDLFDKNGDGMITIEEISQALSLLGLDADFSDLEFTIKSHI 72

Query: 83  QTGNEGLRFEDFAALHQSLNDAYFG----GQDGEVNEENEEEKRMSQEESDLTEAFRVFD 142
           + G+ GL FEDF +LHQSL+ ++FG      + E   +  ++ RM QEESDL+EAF+VFD
Sbjct: 73  KPGSSGLSFEDFVSLHQSLDSSFFGYDNIASEEEAANDIGDQARMRQEESDLSEAFKVFD 132

Query: 143 EDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKDGRVDFFEFKDMMRSVIVR 200
           EDGDGYISA ELQVVLRKL L E  EID + +MI SVDRN+DGRVDFFEFKDMMRSV+VR
Sbjct: 133 EDGDGYISAHELQVVLRKLGLPEAKEIDRIHQMITSVDRNQDGRVDFFEFKDMMRSVLVR 192

[Close]
BLAST of CmaCh06G001820 vs. TAIR10
Match: AT4G20780.1 (AT4G20780.1 calmodulin like 42)

HSP 1 Score: 217.2 bits (552), Expect = 8.9e-57
Identity = 112/180 (62.22%), Postives = 146/180 (81.11%), Query Frame = 1 

Query: 18  KKPSSSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQALSLLGLDAEESELDST 77
           K    SSSF+LR PSLN+LRL+RIFD+FDKNGDG IT EEL QAL+ LGL+A+ S+L ST
Sbjct: 10  KVARQSSSFRLRSPSLNALRLQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKST 69

Query: 78  VNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNEENEEEKRMSQEESDLTEAFRVF 137
           V S+IQ GN GL F+DF++LH++L+D++FGG  G   E  ++    ++ ESDL EAF+VF
Sbjct: 70  VESYIQPGNTGLNFDDFSSLHKTLDDSFFGGACGG-GENEDDPSSAAENESDLAEAFKVF 129

Query: 138 DEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKDGRVDFFEFKDMMRSVIV 197
           DE+GDG+ISA ELQ VL+KL L EG E++ V+KMI+SVDRN+DGRVDFFEFK+MMR+V++
Sbjct: 130 DENGDGFISARELQTVLKKLGLPEGGEMERVEKMIVSVDRNQDGRVDFFEFKNMMRTVVI 188

[Close]
BLAST of CmaCh06G001820 vs. TAIR10
Match: AT5G44460.1 (AT5G44460.1 calmodulin like 43)

HSP 1 Score: 204.9 bits (520), Expect = 4.6e-53
Identity = 110/180 (61.11%), Postives = 136/180 (75.56%), Query Frame = 1 

Query: 18  KKPSSSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQALSLLGLDAEESELDST 77
           K    SSSF+LR PSLN+LRL R+FD+FDKN DG IT EEL QALS LGLDA+ S+L ST
Sbjct: 9   KLSRQSSSFRLRSPSLNALRLHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKST 68

Query: 78  VNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNEENEEEKRMSQEESDLTEAFRVF 137
           V+SFI+    GLRF+DFAALH++L++++FGG+    +            ESDL EAF VF
Sbjct: 69  VDSFIKPDKTGLRFDDFAALHKTLDESFFGGEGSCCD---------GSPESDLEEAFNVF 128

Query: 138 DEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKDGRVDFFEFKDMMRSVIV 197
           DEDGDG+ISA ELQ VL+KL L E  EI+ V+KMI+SVD N DGRVDFFEFK+MM++V+V
Sbjct: 129 DEDGDGFISAVELQKVLKKLGLPEAGEIEQVEKMIVSVDSNHDGRVDFFEFKNMMQTVVV 179

[Close]
BLAST of CmaCh06G001820 vs. TAIR10
Match: AT2G43290.1 (AT2G43290.1 Calcium-binding EF-hand family protein)

HSP 1 Score: 110.9 bits (276), Expect = 9.0e-25
Identity = 70/192 (36.46%), Postives = 105/192 (54.69%), Query Frame = 1 

Query: 2   DGEASSESDVSRPRLSKKPSSSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQA 61
           D      S  S   +   PSSSS+   R   ++   L+R+F MFDKNGDG IT EEL  +
Sbjct: 33  DKTLHKNSPPSPSTMLPSPSSSSAPTKR---IDPSELKRVFQMFDKNGDGRITKEELNDS 92

Query: 62  LSLLGLDAEESELDSTVNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNEENEEEK 121
           L  LG+   + +L   ++     G+  +  ++F +L+ S+ D +    DGE  EE     
Sbjct: 93  LENLGIYIPDKDLTQMIHKIDANGDGCVDIDEFESLYSSIVDEHHN--DGETEEE----- 152

Query: 122 RMSQEESDLTEAFRVFDEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKDG 181
                  D+ +AF VFD+DGDG+I+  EL+ V+  L L +G  +D  +KMI+ VD + DG
Sbjct: 153 -------DMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLDGCKKMIMQVDADGDG 207

Query: 182 RVDFFEFKDMMR 194
           RV++ EF  MM+
Sbjct: 213 RVNYKEFLQMMK 207

[Close]
BLAST of CmaCh06G001820 vs. TAIR10
Match: AT1G05990.1 (AT1G05990.1 EF hand calcium-binding protein family)

HSP 1 Score: 108.2 bits (269), Expect = 5.8e-24
Identity = 61/161 (37.89%), Postives = 94/161 (58.39%), Query Frame = 1 

Query: 33  LNSLRLRRIFDMFDKNGDGMITSEELGQALSLLGLDAEESELDSTVNSFIQTGNEGLRFE 92
           ++   L+R+F MFDKNGDG IT +EL + L  LG+   + EL   +      G+  +  +
Sbjct: 1   MDPTELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDID 60

Query: 93  DFAALHQSLNDAYFGGQDGEVNEENEEEKRMSQEESDLTEAFRVFDEDGDGYISAAELQV 152
           +F  L++++ D           EE+EEE+       D+ EAF VFD++GDG+I+  EL+ 
Sbjct: 61  EFGELYKTIMD-----------EEDEEEE-------DMKEAFNVFDQNGDGFITVDELKA 120

Query: 153 VLRKLRLSEGNEIDSVQKMILSVDRNKDGRVDFFEFKDMMR 194
           VL  L L +G  +D  +KMI  VD + DGRV++ EF+ MM+
Sbjct: 121 VLSSLGLKQGKTLDDCKKMIKKVDVDGDGRVNYKEFRQMMK 143

[Close]
BLAST of CmaCh06G001820 vs. TAIR10
Match: AT4G03290.1 (AT4G03290.1 EF hand calcium-binding protein family)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-22
Identity = 59/161 (36.65%), Postives = 93/161 (57.76%), Query Frame = 1 

Query: 33  LNSLRLRRIFDMFDKNGDGMITSEELGQALSLLGLDAEESELDSTVNSFIQTGNEGLRFE 92
           ++S  L R+F MFDK+GDG IT++EL ++   LG+   E EL   +      G+  +  E
Sbjct: 1   MDSTELNRVFQMFDKDGDGKITTKELNESFKNLGIIIPEDELTQIIQKIDVNGDGCVDIE 60

Query: 93  DFAALHQSLNDAYFGGQDGEVNEENEEEKRMSQEESDLTEAFRVFDEDGDGYISAAELQV 152
           +F  L++++           V +E+E        E D+ EAF VFD +GDG+I+  EL+ 
Sbjct: 61  EFGELYKTIM----------VEDEDEVG------EEDMKEAFNVFDRNGDGFITVDELKA 120

Query: 153 VLRKLRLSEGNEIDSVQKMILSVDRNKDGRVDFFEFKDMMR 194
           VL  L L +G  ++  +KMI+ VD + DGRV++ EF+ MM+
Sbjct: 121 VLSSLGLKQGKTLEECRKMIMQVDVDGDGRVNYMEFRQMMK 145

[Close]
BLAST of CmaCh06G001820 vs. NCBI nr
Match: gi|449439789|ref|XP_004137668.1| (PREDICTED: calcium-binding protein CML42 [Cucumis sativus])

HSP 1 Score: 308.9 bits (790), Expect = 6.4e-81
Identity = 167/198 (84.34%), Postives = 180/198 (90.91%), Query Frame = 1 

Query: 9   SDVSRPRLSKKPSS-SSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQALSLLGL 68
           SDV RPRL+KKPSS SSSF+LRCPSLNSLRLRRIFDMFDKNGDGMIT++ELGQAL LLGL
Sbjct: 6   SDVPRPRLTKKPSSLSSSFRLRCPSLNSLRLRRIFDMFDKNGDGMITTDELGQALGLLGL 65

Query: 69  DAEESELDSTVNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNEENEEEKR----- 128
           DA+ESELDSTVNSFI+ GNEGLRFEDFAALHQSLND YFGG    V +E+E+EKR     
Sbjct: 66  DADESELDSTVNSFIEPGNEGLRFEDFAALHQSLNDTYFGGM---VEDEDEDEKRETSMS 125

Query: 129 -MSQEESDLTEAFRVFDEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKDG 188
            MSQEESDL+EAFRVFDEDGDGYISA ELQVVLRKLRL+EGNEID VQKMILSVDRN+DG
Sbjct: 126 SMSQEESDLSEAFRVFDEDGDGYISATELQVVLRKLRLAEGNEIDRVQKMILSVDRNQDG 185

Query: 189 RVDFFEFKDMMRSVIVRT 200
           RVDFFEFKDMMRSVIVR+
Sbjct: 186 RVDFFEFKDMMRSVIVRS 200

[Close]
BLAST of CmaCh06G001820 vs. NCBI nr
Match: gi|659083356|ref|XP_008442311.1| (PREDICTED: calcium-binding allergen Bet v 3 [Cucumis melo])

HSP 1 Score: 299.7 bits (766), Expect = 3.9e-78
Identity = 162/193 (83.94%), Postives = 174/193 (90.16%), Query Frame = 1 

Query: 9   SDVSRPRLSKKPS-SSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQALSLLGL 68
           SDV RPRL+KKPS SSSSF+LRCPSLNSLRLRRIFDMFDKNGDGMIT+EELGQAL LLGL
Sbjct: 6   SDVPRPRLTKKPSSSSSSFRLRCPSLNSLRLRRIFDMFDKNGDGMITAEELGQALGLLGL 65

Query: 69  DAEESELDSTVNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNEENEEE-KRMSQE 128
           DA+ESELDSTVNSFI+ GN GLRFEDFAALHQSLND YF G   + +E+ E     MSQE
Sbjct: 66  DADESELDSTVNSFIKPGNVGLRFEDFAALHQSLNDTYFAGMVEDEDEKRETSMSSMSQE 125

Query: 129 ESDLTEAFRVFDEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKDGRVDFF 188
           ESDL+EAFRVFDEDGDGYISA ELQVVLRKLRL+EGNEID VQKMILSVDRN+DGRVDFF
Sbjct: 126 ESDLSEAFRVFDEDGDGYISATELQVVLRKLRLAEGNEIDRVQKMILSVDRNQDGRVDFF 185

Query: 189 EFKDMMRSVIVRT 200
           EFKDMMRSVIVR+
Sbjct: 186 EFKDMMRSVIVRS 198

[Close]
BLAST of CmaCh06G001820 vs. NCBI nr
Match: gi|1009159353|ref|XP_015897767.1| (PREDICTED: calcium-binding allergen Bet v 3 [Ziziphus jujuba])

HSP 1 Score: 263.5 bits (672), Expect = 3.1e-67
Identity = 141/200 (70.50%), Postives = 164/200 (82.00%), Query Frame = 1 

Query: 5   ASSESDVSRPRLSKKPSSSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQALSL 64
           ++S S  S  R   K  SSSSF LRCPSLN+LRLRRIFD+FDKN DG IT +ELGQAL+L
Sbjct: 14  STSASSKSCKRSLSKKLSSSSFSLRCPSLNTLRLRRIFDLFDKNRDGTITGQELGQALNL 73

Query: 65  LGLDAEESELDSTVNSFIQTGNEGLRFEDFAALHQSLNDAYFGG-----QDGEVNEENEE 124
           LGLD + +EL+ST+NSF++ GNEGL FEDF ALHQSLND YFGG     Q+ E  ++ EE
Sbjct: 74  LGLDVDMAELESTINSFVRPGNEGLMFEDFKALHQSLNDTYFGGDMDVEQEEEEADQEEE 133

Query: 125 EKRMSQEESDLTEAFRVFDEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNK 184
           E+ MSQE+SDLTEAF+VFDEDGDGYISA ELQVVL KL  +EGNEID V+KMI SVDRN+
Sbjct: 134 EEEMSQEDSDLTEAFKVFDEDGDGYISAHELQVVLGKLGFAEGNEIDRVEKMITSVDRNQ 193

Query: 185 DGRVDFFEFKDMMRSVIVRT 200
           DGRVDFFEFKDMMRSV+VR+
Sbjct: 194 DGRVDFFEFKDMMRSVLVRS 213

[Close]
BLAST of CmaCh06G001820 vs. NCBI nr
Match: gi|255582044|ref|XP_002531819.1| (PREDICTED: calcium-binding allergen Bet v 3 [Ricinus communis])

HSP 1 Score: 244.6 bits (623), Expect = 1.5e-61
Identity = 132/199 (66.33%), Postives = 163/199 (81.91%), Query Frame = 1 

Query: 1   MDGEASSESDVSRPRLSKKPSSSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQ 60
           M+ E ++ S  +RP LS+K S++SSF+LR PSLNSLRLRRIFD+FDKNGDGMIT ++L Q
Sbjct: 1   MEVEPAAASTGTRPTLSRKASTASSFRLRSPSLNSLRLRRIFDLFDKNGDGMITVQDLSQ 60

Query: 61  ALSLLGLDAEESELDSTVNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNEENEEE 120
           ALSLLGL+A+ SEL+ST+ S I+ GN+GL FEDF +LHQSL++A+F   D E+     + 
Sbjct: 61  ALSLLGLEADFSELESTIRSHIRPGNDGLAFEDFFSLHQSLDEAFFSYDDEEMEANGVD- 120

Query: 121 KRMSQEESDLTEAFRVFDEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKD 180
             ++QEESDLTEAF+VFDEDGDGYISA ELQVVLRKL + E  EI+ VQ+MI SVDRN D
Sbjct: 121 -AVTQEESDLTEAFKVFDEDGDGYISAHELQVVLRKLGMPEAKEIERVQQMICSVDRNHD 180

Query: 181 GRVDFFEFKDMMRSVIVRT 200
           GRVDFFEFKDMMRSV+VR+
Sbjct: 181 GRVDFFEFKDMMRSVLVRS 197

[Close]
BLAST of CmaCh06G001820 vs. NCBI nr
Match: gi|802777809|ref|XP_012090979.1| (PREDICTED: calcium-binding protein CML42-like [Jatropha curcas])

HSP 1 Score: 244.2 bits (622), Expect = 1.9e-61
Identity = 131/189 (69.31%), Postives = 158/189 (83.60%), Query Frame = 1 

Query: 13  RPRLSKKPSSSSSFQLRCPSLNSLRLRRIFDMFDKNGDGMITSEELGQALSLLGLDAEES 72
           +P L++K S+SSSF+LR PSLNSLRLRRIFD+FDKNGDGMIT E+L QAL+LLGLDA+ S
Sbjct: 8   KPCLTRKGSTSSSFRLRSPSLNSLRLRRIFDLFDKNGDGMITVEDLSQALTLLGLDADFS 67

Query: 73  ELDSTVNSFIQTGNEGLRFEDFAALHQSLNDAYFGGQDGEVNEENEEE--KRMSQEESDL 132
           EL+ST+ S I+ GN+GL FEDF ALHQSL+DA+        NE+N E+    +SQEESDL
Sbjct: 68  ELESTIRSHIKPGNDGLAFEDFVALHQSLDDAF------SSNEQNVEDAGDAISQEESDL 127

Query: 133 TEAFRVFDEDGDGYISAAELQVVLRKLRLSEGNEIDSVQKMILSVDRNKDGRVDFFEFKD 192
           TEAF+VFDEDGDGYISA ELQVVLRKL + E  E+D +Q+MI+SVD N+DGRVDFFEFKD
Sbjct: 128 TEAFKVFDEDGDGYISAHELQVVLRKLGMPEAKELDRIQQMIISVDSNQDGRVDFFEFKD 187

Query: 193 MMRSVIVRT 200
           MMRSV+VR+
Sbjct: 188 MMRSVLVRS 190

The following BLAST results are available for this feature:
BLAST of CmaCh06G001820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ALLB3_BETPN1.8e-5963.64Calcium-binding allergen Bet v 3 OS=Betula pendula GN=BETVIII PE=1 SV=1[more]
CML42_ARATH1.6e-5562.22Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1[more]
CAST_SOLTU6.2e-5261.34Calcium-binding protein CAST OS=Solanum tuberosum PE=2 SV=1[more]
CML43_ARATH8.1e-5261.11Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=... [more]
CML27_ORYSJ6.6e-4655.38Probable calcium-binding protein CML27 OS=Oryza sativa subsp. japonica GN=CML27 ... [more]
BLAST of CmaCh06G001820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA10_CUCSA4.4e-8184.34Calcium binding protein/cast OS=Cucumis sativus GN=Csa_3G727960 PE=4 SV=1[more]
B9T0Q0_RICCO1.0e-6166.33Calcium binding protein/cast, putative OS=Ricinus communis GN=RCOM_0126810 PE=4 ... [more]
A0A067JGC3_JATCU1.3e-6169.31Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00615 PE=4 SV=1[more]
A0A061EPX4_THECC1.9e-6063.81Calmodulin like 42 OS=Theobroma cacao GN=TCM_019645 PE=4 SV=1[more]
Q6ZXI3_POPCA2.4e-5867.96Putative calmodulin-like protein OS=Populus canadensis PE=2 SV=1[more]
BLAST of CmaCh06G001820 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G20780.18.9e-5762.22 calmodulin like 42[more]
AT5G44460.14.6e-5361.11 calmodulin like 43[more]
AT2G43290.19.0e-2536.46 Calcium-binding EF-hand family protein[more]
AT1G05990.15.8e-2437.89 EF hand calcium-binding protein family[more]
AT4G03290.11.1e-2236.65 EF hand calcium-binding protein family[more]
BLAST of CmaCh06G001820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439789|ref|XP_004137668.1|6.4e-8184.34PREDICTED: calcium-binding protein CML42 [Cucumis sativus][more]
gi|659083356|ref|XP_008442311.1|3.9e-7883.94PREDICTED: calcium-binding allergen Bet v 3 [Cucumis melo][more]
gi|1009159353|ref|XP_015897767.1|3.1e-6770.50PREDICTED: calcium-binding allergen Bet v 3 [Ziziphus jujuba][more]
gi|255582044|ref|XP_002531819.1|1.5e-6166.33PREDICTED: calcium-binding allergen Bet v 3 [Ricinus communis][more]
gi|802777809|ref|XP_012090979.1|1.9e-6169.31PREDICTED: calcium-binding protein CML42-like [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR018247EF_Hand_1_Ca_BS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G001820.1CmaCh06G001820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPFAMPF13405EF-hand_6coord: 37..66
score: 4.
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 128..193
score: 9.3
IPR002048EF-hand domainSMARTSM00054efh_1coord: 129..157
score: 1.0E-6coord: 37..65
score: 1.1E-6coord: 167..195
score: 7.
IPR002048EF-hand domainPROFILEPS50222EF_HAND_2coord: 163..198
score: 13.37coord: 125..160
score: 15.267coord: 33..68
score: 15
IPR011992EF-hand domain pairGENE3DG3DSA:1.10.238.10coord: 37..99
score: 3.9E-15coord: 121..194
score: 6.6
IPR011992EF-hand domain pairunknownSSF47473EF-handcoord: 130..193
score: 4.34E-32coord: 37..103
score: 4.34
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 138..150
score: -coord: 46..58
score: -coord: 176..188
scor
NoneNo IPR availableunknownCoilCoilcoord: 113..133
scor
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 121..197
score: 1.3E-85coord: 21..102
score: 1.3
NoneNo IPR availablePANTHERPTHR10891:SF589CALCIUM-BINDING PROTEIN CML42-RELATEDcoord: 121..197
score: 1.3E-85coord: 21..102
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh06G001820Cucsa.177090Cucumber (Gy14) v1cgycmaB0506
CmaCh06G001820Cla018064Watermelon (97103) v1cmawmB788
CmaCh06G001820Csa3G727960Cucumber (Chinese Long) v2cmacuB815
CmaCh06G001820MELO3C009094Melon (DHL92) v3.5.1cmameB755
CmaCh06G001820ClCG10G022840Watermelon (Charleston Gray)cmawcgB726
CmaCh06G001820CSPI03G30510Wild cucumber (PI 183967)cmacpiB827
CmaCh06G001820CmoCh06G001720Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G001820Lsi03G022920Bottle gourd (USVL1VR-Ls)cmalsiB754
CmaCh06G001820Cp4.1LG08g12690Cucurbita pepo (Zucchini)cmacpeB852
CmaCh06G001820MELO3C009094.2Melon (DHL92) v3.6.1cmamedB855
CmaCh06G001820CsaV3_3G032970Cucumber (Chinese Long) v3cmacucB0966
CmaCh06G001820Cla97C10G206280Watermelon (97103) v2cmawmbB844
CmaCh06G001820Bhi11G001435Wax gourdcmawgoB0976
CmaCh06G001820CsGy3G028360Cucumber (Gy14) v2cgybcmaB428
CmaCh06G001820Carg01154Silver-seed gourdcarcmaB0216
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh06G001820CmaCh14G000060Cucurbita maxima (Rimu)cmacmaB278
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh06G001820Cucumber (Chinese Long) v3cmacucB0988
CmaCh06G001820Watermelon (97103) v2cmawmbB855
CmaCh06G001820Wax gourdcmawgoB1036
CmaCh06G001820Cucurbita maxima (Rimu)cmacmaB520
CmaCh06G001820Cucurbita moschata (Rifu)cmacmoB792
CmaCh06G001820Cucumber (Chinese Long) v2cmacuB836
CmaCh06G001820Watermelon (Charleston Gray)cmawcgB736
CmaCh06G001820Watermelon (97103) v1cmawmB806
CmaCh06G001820Cucurbita pepo (Zucchini)cmacpeB809
CmaCh06G001820Cucurbita pepo (Zucchini)cmacpeB830
CmaCh06G001820Bottle gourd (USVL1VR-Ls)cmalsiB748
CmaCh06G001820Cucumber (Gy14) v2cgybcmaB561