CmaCh06G000830 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G000830
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Transcription factor
Location	Cma_Chr06 : 464304 .. 470129 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGTAGAGGGTAAAATCTGTAGAAACCATTTTCTCTCTGCTTCTTTATCTCTGATCTCTGTAAACAAAACTCCGTTTTGCGTATAATTATGCACTCCAAGTTGAACGGTACCATCAAGCAACGTTGCTTTCGCCATACTTCAAATGGGTTCCAGAAGTAATCTCGACTGATTATTAAGAGGAGGAAGAAAGTAGATTGGCTGCCATTGAAGATAGTTTCCTTTTCCTTCATACCCAGATTCTGTTTCTCTTTCATTCACCTCCATTTCCCCTCTGATTGATCGATTAGCTCTGTAATCCCACATTTGAGGAGCTGGGTTTTGCTCGGAATTTGGTGAAGGTGAAGGGGAATTTGTGAAGTTGTTGTTACTGTAAATGGAGATTGAAGTGGGGACTGTTGGTGGATCCAGTCCCATCAGGCGTCAGTTGAATTACACTGGACTTGAATCGCATCAATTCTTTGAAGAAATTCAGGGGTTGATGACGATTCCGTCGGAAAATGCTAGCTCCTTCACGGCGCTTTTGGAACTTCCGGCAACGCAGGCTTTGGAGCTTCTCCACTCGCCGGATTCCGCGGAGGTTAAGAAGGATGATTCCGTTCACCACCGTGTCAAATACGTTCCGAAACCCTACTTCAGTGCCTTAAATTGCAATTTGACCTTCCCGACGAACTCGCCTCTAAACGAACACGACGCCAAATTCTCTGTCGTGGCTGAAGAGCAACTGCCGGAGACGACGAGTTCAGTGCCGTTGAATTCGAGCGTCAGTTTGGAGAAAGTGAAGAACGAGCCCACCATTGAAACCGATTCGAACCCTAATCACTTGTATCCGAAAATCTCCGACCCGGCGGTGGAGAACAACACGAATCAGAGATCGGTGAAGAGGAAGGAGCGCGAGAAAAAGGTAACCGATAATCAAAAATTTCAAAAGAACAAATACAAAGAAACCTAGGGCTTTGATTTCTACATCAATTTCCATGTCTGAATTTCAATCAATTACAATGTTTAACCAATTCAGGGAAAAGGGTCATCAAAGAAGAGCAAGAACGAGAGCCAGGAAGATGCAGAGAAGCTCCCTTACGTTCATGTCCGAGCCGGCCGTGGTCAAGCGACAGACAAACATAGCCTAGCAGAGCGAGTAATTTTGTTAATTAATCAGTACTTAAGATCTGATCATCAATTTTAGTCTGATTAACTGTGCTGAATTAACACTTTATTCCCTTTTGGTTTGGAAAGGCAAGGAGAGAGAAAATCAATGCTCGGATGAAGCTACTTCAAGAACTGGTCCCTGGATGCAATAAGGTCAGTAGTCTTCGTAGTTATGCAGTCTTTATCATAATTAAATGTTCTTTGATTCAATCTGTGGAGCTTTATTGTGATTTCTCTCTAATTGTCTGCCAAAAAGTGGAATTATGGTTCTTGGATTATGAACTTTAATAACGGTTCTTGTCATTGTCACCTTTTCTGTAATAAAGTGGTTGCTTTTGAGCCAAGGGAAGTGCCCAGTAGGTCTTTTTCTTCATCTTTCCTTTCTTACCTTCTCTCGAGCATCTGTCGGGAATCTGAATTCTACCCACGTGAGCCTAGTTCAATGGTAATTGGCATATACTCTCGATCAAAAGGTTAAAAATTCGAATTCCCAAATGGGAAGATGGAGTTAGATGTTATTTGTTTATTTTGGTTCGGGAAGAACTCAAATGAGTAAAAGTTCGCAGTCAACTTTATCGTGTATTCTATTCGTACGATGCTCGCTTAATATTTCTTACATCCATAGAGATTGCTTGAAATCTCAGCAATTTTCACTTTGATTGGCTTGGAAATTTAGTTCCAAAGGAATGCAAGCTGGACTTACCTTGAAGGAGTTGGGGGAATCAGAAGGGGTCCCATATGCTTGTTGGGTTGTTGATACTCATTTGAGGGTCCATGCTATTTTCCATCTATTTTAAGTTAGGCATCCATCATAAACGGGATGCAAATATGGGATGACAGAACAGCAACTTCCTCACCTAACTTATCTGAGGACGTGGAGAATGTGAGCGTTTTTAGAAAAAGATATGCATCCCGGAGTTGTGAATAGCCGTGATAGAGTGAGTCGAAGAATTACGAGACGTTTGAAATAAACAGATTGAGACTGACTCCGTCTCGTTTGTCATGTACCGTGTAGTTTGAACATTATAGTCTTGTGAAGATTCAGAAGTCGAGAAGAAGATTAGATGTCGTTAAGCACTGAACTGTTTTTTTTCTATTCATATCAAATGTAATGAAGTAGTCTGCAAGTTAGAAACTGAGTTCTTTATTTGTTTTCTTCCTTCCTCTGTCTCTGTAGATCTCAGGTACAGCTCTAGTGTTGGATGAAATCATCAACCATGTACAATCGCTGCAGCGTCAAGTGGAGGTCAGAATCTTACTTAAACGTTTTGAGATTCGTTCTGAATTGATACGTATATGATACCACTAGGTAGATAGAAATGTATAAGCTCGACAAGAATACGTTTATGTACCTTGTTTTATGTATGTCAGCTCCTGGAGTTGTTCTTTTTGGTGGCTCCATCGATGATTGTTCGGACTAGCTTGCGTGTTCCTCGATTCAAAATAGGAAAGAGAGAGAGAGAGAGAGCCAATATGCATCATTTTCAGTAGTTATTTTCTTTTTATATATCAACCAACTTGTGTTGAACTTGCTGTGTTGCAGTTCTTGTCAATGAGGCTTGCAGCAGTTAACCCCAGAGTTGATTTCAACATTGATAGCATATTGGCTGCAGAAGTAAGTATATCAGCGCATCTGCTTCTTTTTCTTTGTCAACTTTCCGTGAACTAGCGACTGAGATTTAACGTCGTGTTATCGTTTACTGAAATCTCAGAACGAACCCGTACACGAAAGCAACCTTCCAACCATGGTTATGCCATTGATGTGGTCAGAAATCTCCCCAAGTGGAAGCAGACAACAATATCAACAGCAATGGCATTTTGATGCAGCAGTAGTTAACCAGCTAGCGGGGGCGAGGGACGAGCATAACCTTCATACTTTCAGCACTCCTGAAAACTCTCTTTTAAGTTACGACTCTTCAGCAAATTCAGGTATACAACTATTACTCTATGATCTTATTCTGTAATACAATAAAATTACCAATTTAATCATAGCTCAACTGATAAACTATGTATGAAACAGCATCTGTACACTCGAAATCAGTTGAAGATGGAGGCGTGAAGGCAGCATTATATTTTAGTTGTAGGTAGCAGCCGTGTATATAGCGAAATATATTAATAGTGATAGAAGTAAGCAGAGAAGTAGAGAATCTGCCTCCACATTCAACTGGGTGTTCAAGGAGAAGAAGAACGACGAAGAAGACAGATGCAGAGAGGAATTTGATTTGGTATCTAAATTTCTAATGTGTATACTAATTTGGGGGCTGCTTTGATTGAAGCCAATACTCAAAGACTGTCGGACTAAAATTCTACTGATTGTGATTGCTACTCCACACATACTTTCCAATATTCATTTGCTAATCTAATTTTATTTTGAGCTATTCACTAAGAATTTCTTCAGTGATCTTAATGAAATCTAACGTAATCCATTATTCGCCCACCAAGTAAGTACCGGAGAGCTTTTCAATTCTAATAAAATAAAAATATATCTAGACGGGAAAGGAAAAATCTGAATCAAGAGATGAAGATGAATCAACATCCAATGGCAATTCTATTATTCTTTTTCTTCTCTCTCATCATCCATTCACGCTGCGTTGTTCCCTCAATCAGACTTCCCGGCGGATCAACCTCTTTCTCCGTCACCGACTTCGGAGCCATCGGCGATGGAGTCCACTACGACACTGCAGCGATTCAATCCGCTATTAACAGCTGCCCCTCGCCGGTCCGCTGCTACGTTATATTCCCGCCGGGTACCTACCTGACCGCGACGATATGGCTTCAATCCGGCGTCGTATTGGACATCCAACCTGGCGCCACCGTGCTTGCCGGAACGAGGATGGAGGACTATCCCATGGATTCGTCGAGGTGGTACGCGGTGGTGGCGGAGAACGCGAGCGATGTCGAGATCATCGGCGGAGGCGTGGTGGATGGGCAGGGGCTGAAATTCGTGGAGAAGTTCGATAAGAGGAAGAACGTGATGGTGAGTTGGAACAAGACCGGGGCGTGCTATGGCGATGAGTGCAGGCCGGATCTGATTGGGTTCATCGGGTCGAAGAATGTTAGGGTTTCGAATGTTAGTTTGAATCAGCCTGCTCACTGGTGGTGCGTGGGACTCTCTCCCTGCCTCTGCCTCTCTCCCTCTCTCTTACATAATTACTGCATTTCTCTTAAGTGAAATTTTATGCAGCTTGCACCTGGTTCNATGTGAGAACACAATCATCGAAGATGTTTCAATTTATGGAGATTTCGATACACCAAACAACGACGGGATTGATATTGAAGACTCCAATAATACCTTCATTACAAGGTGCAGAATCGACACTGGGGATGATGCAATCTGCCCCAAAGCATCTAATGGCCCTGTCTTCAACTTAACTGCCACTAACTGCTGGATTAGAACCAAATCTTCTGCCATCAAGCTGGGTAGCGCCAGTTGGTTCAATTTCACCCGAATGCTCTTCGACAACATCACCATTGTCGATTCTCATCGAGGTCTGGGGTTCCAGCTGCGCGATGGAGGTCAGTTTTCCATTCCCTTCTTAGTTGTGATGCTCAGACTTTAGTCTTTTTGGAGCCGTTCTAGGTAACAGTCTTCTGCTTTTAGAACAAGATTTCAGCCTTTTAGACGTGGGTTTGGAGCAAAATACAGAAATTCAGACAAATAGAAACCTATTTTTATATTACCAACTTGAAGATAATTCGATAAGTTAAGACATGTTCTCCACCAAAAGATCGGAGTGGTTTGAATCTCCACTCCTTTCCTATCCCATTAAGAAACAGATAATCCAGGCTTTCTAAATCTGACACTGAGTTGTAATACTAGCTAAGCTCTGGCTCTTAGCCCATCTCATGTTTCTGAAATTCGATGTGCTAGTTCAACCTGAGAGGACAGATTCATTTCCAGCCATTAAGCTTTCAGAACCATAATGAATTTCTCTCTTCTTTTCTCCTGTAGGAAGTGCAAATGACATTACATTCTCAAACATGAACATAAGTACAAGATATTATGATCCTTCATGGTGGGGAAGAGCTGAGCCAATTTACGTTACGACTTGCCCTAGAGATCCAGGCTCGAAGGAGGGTTCAATCTCCAACGTAAACTTCATAAACATCACAGCAACCTCCGAAAATGGGGTTTTCTTGTCGGGATCGAAATCCGGAGTTCTGAGTAATCTGAGATTCAACAACGTGAAGTTGACCTACAAAAGATGGACAAAATATGGTGGTGGTATAGCAGACTACAGACCGGGTTGCCAAGGCTTTGTTAAACATGGGATGGCAGGTATGATTATGGAGCATATTGAAGGATTGAGTTTCGAAAATGTTGATATGAAATGGTCTGATGATGATGATGGATCATTACAGTGGAATAATCCTTTGGATTTTAGACCATCAACTGTGAGTAACATCTCTTTCTTGAACTTTCATTCAGGTTATTTAAGAGAATGAAAGCTGTGGTTTATTTGAATCCTGAAAGTGTATCTTCTTTTCTTTCTGTAAGAATGTGTATAGAATAATTGTACTCTGCATTTAAGAGGTTGCTATATAGTGGTTTGTTGAAGACTTTGATTATTTGAATTCTTCATTTGTTGCAAATGGTTAAGAACAACCATCATGGAAACCATTGTCTCAACATTTCTGAAGTCATTCAGTAGCACAGAGCTACAACGTTTGTACAGAA

mRNA sequence

ACTGTAGAGGGTAAAATCTGTAGAAACCATTTTCTCTCTGCTTCTTTATCTCTGATCTCTGTAAACAAAACTCCGTTTTGCGTATAATTATGCACTCCAAGTTGAACGGTACCATCAAGCAACGTTGCTTTCGCCATACTTCAAATGGGTTCCAGAAGTAATCTCGACTGATTATTAAGAGGAGGAAGAAAGTAGATTGGCTGCCATTGAAGATAGTTTCCTTTTCCTTCATACCCAGATTCTGTTTCTCTTTCATTCACCTCCATTTCCCCTCTGATTGATCGATTAGCTCTGTAATCCCACATTTGAGGAGCTGGGTTTTGCTCGGAATTTGGTGAAGGTGAAGGGGAATTTGTGAAGTTGTTGTTACTGTAAATGGAGATTGAAGTGGGGACTGTTGGTGGATCCAGTCCCATCAGGCGTCAGTTGAATTACACTGGACTTGAATCGCATCAATTCTTTGAAGAAATTCAGGGGTTGATGACGATTCCGTCGGAAAATGCTAGCTCCTTCACGGCGCTTTTGGAACTTCCGGCAACGCAGGCTTTGGAGCTTCTCCACTCGCCGGATTCCGCGGAGGTTAAGAAGGATGATTCCGTTCACCACCGTGTCAAATACGTTCCGAAACCCTACTTCAGTGCCTTAAATTGCAATTTGACCTTCCCGACGAACTCGCCTCTAAACGAACACGACGCCAAATTCTCTGTCGTGGCTGAAGAGCAACTGCCGGAGACGACGAGTTCAGTGCCGTTGAATTCGAGCGTCAGTTTGGAGAAAGTGAAGAACGAGCCCACCATTGAAACCGATTCGAACCCTAATCACTTGTATCCGAAAATCTCCGACCCGGCGGTGGAGAACAACACGAATCAGAGATCGGTGAAGAGGAAGGAGCGCGAGAAAAAGGGAAAAGGGTCATCAAAGAAGAGCAAGAACGAGAGCCAGGAAGATGCAGAGAAGCTCCCTTACGTTCATGTCCGAGCCGGCCGTGGTCAAGCGACAGACAAACATAGCCTAGCAGAGCGAGCAAGGAGAGAGAAAATCAATGCTCGGATGAAGCTACTTCAAGAACTGGTCCCTGGATGCAATAAGATCTCAGGTACAGCTCTAGTGTTGGATGAAATCATCAACCATGTACAATCGCTGCAGCGTCAAGTGGAGTTCTTGTCAATGAGGCTTGCAGCAGTTAACCCCAGAGTTGATTTCAACATTGATAGCATATTGGCTGCAGAAAACGAACCCGTACACGAAAGCAACCTTCCAACCATGGTTATGCCATTGATGTGGTCAGAAATCTCCCCAAGTGGAAGCAGACAACAATATCAACAGCAATGGCATTTTGATGCAGCAGTAGTTAACCAGCTAGCGGGGGCGAGGGACGAGCATAACCTTCATACTTTCAGCACTCCTGAAAACTCTCTTTTAAGTTACGACTCTTCAGCAAATTCAGCATCTGTACACTCGAAATCAGTTGAAGATGGAGGCGTGAAGGCAGCATTATATTTTAGTTGTAGACGGGAAAGGAAAAATCTGAATCAAGAGATGAAGATGAATCAACATCCAATGGCAATTCTATTATTCTTTTTCTTCTCTCTCATCATCCATTCACGCTGCGTTGTTCCCTCAATCAGACTTCCCGGCGGATCAACCTCTTTCTCCGTCACCGACTTCGGAGCCATCGGCGATGGAGTCCACTACGACACTGCAGCGATTCAATCCGCTATTAACAGCTGCCCCTCGCCGGTCCGCTGCTACGTTATATTCCCGCCGGGTACCTACCTGACCGCGACGATATGGCTTCAATCCGGCGTCGTATTGGACATCCAACCTGGCGCCACCGTGCTTGCCGGAACGAGGATGGAGGACTATCCCATGGATTCGTCGAGGTGGTACGCGGTGGTGGCGGAGAACGCGAGCGATGTCGAGATCATCGGCGGAGGCGTGGTGGATGGGCAGGGGCTGAAATTCGTGGAGAAGTTCGATAAGAGGAAGAACGTGATGGTGAGTTGGAACAAGACCGGGGCGTGCTATGGCGATGAGTGCAGGCCGGATCTGATTGGGTTCATCGGGTCGAAGAATGTTAGGGTTTCGAATGTTAGTTTGAATCAGCCTGCTCACTGGTGCTTGCACCTGGTTCNATGTGAGAACACAATCATCGAAGATGTTTCAATTTATGGAGATTTCGATACACCAAACAACGACGGGATTGATATTGAAGACTCCAATAATACCTTCATTACAAGGTGCAGAATCGACACTGGGGATGATGCAATCTGCCCCAAAGCATCTAATGGCCCTGTCTTCAACTTAACTGCCACTAACTGCTGGATTAGAACCAAATCTTCTGCCATCAAGCTGGGTAGCGCCAGTTGGTTCAATTTCACCCGAATGCTCTTCGACAACATCACCATTGTCGATTCTCATCGAGGTCTGGGGTTCCAGCTGCGCGATGGAGGAAGTGCAAATGACATTACATTCTCAAACATGAACATAAGTACAAGATATTATGATCCTTCATGGTGGGGAAGAGCTGAGCCAATTTACGTTACGACTTGCCCTAGAGATCCAGGCTCGAAGGAGGGTTCAATCTCCAACGTAAACTTCATAAACATCACAGCAACCTCCGAAAATGGGGTTTTCTTGTCGGGATCGAAATCCGGAGTTCTGAGTAATCTGAGATTCAACAACGTGAAGTTGACCTACAAAAGATGGACAAAATATGGTGGTGGTATAGCAGACTACAGACCGGGTTGCCAAGGCTTTGTTAAACATGGGATGGCAGGTATGATTATGGAGCATATTGAAGGATTGAGTTTCGAAAATGTTGATATGAAATGGTCTGATGATGATGATGGATCATTACAGTGGAATAATCCTTTGGATTTTAGACCATCAACTGTGAGTAACATCTCTTTCTTGAACTTTCATTCAGGTTATTTAAGAGAATGAAAGCTGTGGTTTATTTGAATCCTGAAAGTGTATCTTCTTTTCTTTCTGTAAGAATGTGTATAGAATAATTGTACTCTGCATTTAAGAGGTTGCTATATAGTGGTTTGTTGAAGACTTTGATTATTTGAATTCTTCATTTGTTGCAAATGGTTAAGAACAACCATCATGGAAACCATTGTCTCAACATTTCTGAAGTCATTCAGTAGCACAGAGCTACAACGTTTGTACAGAA

Coding sequence (CDS)

ATGGAGATTGAAGTGGGGACTGTTGGTGGATCCAGTCCCATCAGGCGTCAGTTGAATTACACTGGACTTGAATCGCATCAATTCTTTGAAGAAATTCAGGGGTTGATGACGATTCCGTCGGAAAATGCTAGCTCCTTCACGGCGCTTTTGGAACTTCCGGCAACGCAGGCTTTGGAGCTTCTCCACTCGCCGGATTCCGCGGAGGTTAAGAAGGATGATTCCGTTCACCACCGTGTCAAATACGTTCCGAAACCCTACTTCAGTGCCTTAAATTGCAATTTGACCTTCCCGACGAACTCGCCTCTAAACGAACACGACGCCAAATTCTCTGTCGTGGCTGAAGAGCAACTGCCGGAGACGACGAGTTCAGTGCCGTTGAATTCGAGCGTCAGTTTGGAGAAAGTGAAGAACGAGCCCACCATTGAAACCGATTCGAACCCTAATCACTTGTATCCGAAAATCTCCGACCCGGCGGTGGAGAACAACACGAATCAGAGATCGGTGAAGAGGAAGGAGCGCGAGAAAAAGGGAAAAGGGTCATCAAAGAAGAGCAAGAACGAGAGCCAGGAAGATGCAGAGAAGCTCCCTTACGTTCATGTCCGAGCCGGCCGTGGTCAAGCGACAGACAAACATAGCCTAGCAGAGCGAGCAAGGAGAGAGAAAATCAATGCTCGGATGAAGCTACTTCAAGAACTGGTCCCTGGATGCAATAAGATCTCAGGTACAGCTCTAGTGTTGGATGAAATCATCAACCATGTACAATCGCTGCAGCGTCAAGTGGAGTTCTTGTCAATGAGGCTTGCAGCAGTTAACCCCAGAGTTGATTTCAACATTGATAGCATATTGGCTGCAGAAAACGAACCCGTACACGAAAGCAACCTTCCAACCATGGTTATGCCATTGATGTGGTCAGAAATCTCCCCAAGTGGAAGCAGACAACAATATCAACAGCAATGGCATTTTGATGCAGCAGTAGTTAACCAGCTAGCGGGGGCGAGGGACGAGCATAACCTTCATACTTTCAGCACTCCTGAAAACTCTCTTTTAAGTTACGACTCTTCAGCAAATTCAGCATCTGTACACTCGAAATCAGTTGAAGATGGAGGCGTGAAGGCAGCATTATATTTTAGTTGTAGACGGGAAAGGAAAAATCTGAATCAAGAGATGAAGATGAATCAACATCCAATGGCAATTCTATTATTCTTTTTCTTCTCTCTCATCATCCATTCACGCTGCGTTGTTCCCTCAATCAGACTTCCCGGCGGATCAACCTCTTTCTCCGTCACCGACTTCGGAGCCATCGGCGATGGAGTCCACTACGACACTGCAGCGATTCAATCCGCTATTAACAGCTGCCCCTCGCCGGTCCGCTGCTACGTTATATTCCCGCCGGGTACCTACCTGACCGCGACGATATGGCTTCAATCCGGCGTCGTATTGGACATCCAACCTGGCGCCACCGTGCTTGCCGGAACGAGGATGGAGGACTATCCCATGGATTCGTCGAGGTGGTACGCGGTGGTGGCGGAGAACGCGAGCGATGTCGAGATCATCGGCGGAGGCGTGGTGGATGGGCAGGGGCTGAAATTCGTGGAGAAGTTCGATAAGAGGAAGAACGTGATGGTGAGTTGGAACAAGACCGGGGCGTGCTATGGCGATGAGTGCAGGCCGGATCTGATTGGGTTCATCGGGTCGAAGAATGTTAGGGTTTCGAATGTTAGTTTGAATCAGCCTGCTCACTGGTGCTTGCACCTGGTTCNATGTGAGAACACAATCATCGAAGATGTTTCAATTTATGGAGATTTCGATACACCAAACAACGACGGGATTGATATTGAAGACTCCAATAATACCTTCATTACAAGGTGCAGAATCGACACTGGGGATGATGCAATCTGCCCCAAAGCATCTAATGGCCCTGTCTTCAACTTAACTGCCACTAACTGCTGGATTAGAACCAAATCTTCTGCCATCAAGCTGGGTAGCGCCAGTTGGTTCAATTTCACCCGAATGCTCTTCGACAACATCACCATTGTCGATTCTCATCGAGGTCTGGGGTTCCAGCTGCGCGATGGAGGAAGTGCAAATGACATTACATTCTCAAACATGAACATAAGTACAAGATATTATGATCCTTCATGGTGGGGAAGAGCTGAGCCAATTTACGTTACGACTTGCCCTAGAGATCCAGGCTCGAAGGAGGGTTCAATCTCCAACGTAAACTTCATAAACATCACAGCAACCTCCGAAAATGGGGTTTTCTTGTCGGGATCGAAATCCGGAGTTCTGAGTAATCTGAGATTCAACAACGTGAAGTTGACCTACAAAAGATGGACAAAATATGGTGGTGGTATAGCAGACTACAGACCGGGTTGCCAAGGCTTTGTTAAACATGGGATGGCAGGTATGATTATGGAGCATATTGAAGGATTGAGTTTCGAAAATGTTGATATGAAATGGTCTGATGATGATGATGGATCATTACAGTGGAATAATCCTTTGGATTTTAGACCATCAACTGTGAGTAACATCTCTTTCTTGAACTTTCATTCAGGTTATTTAAGAGAATGA

Protein sequence

MEIEVGTVGGSSPIRRQLNYTGLESHQFFEEIQGLMTIPSENASSFTALLELPATQALELLHSPDSAEVKKDDSVHHRVKYVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEQLPETTSSVPLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPAVENNTNQRSVKRKEREKKGKGSSKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIDSILAAENEPVHESNLPTMVMPLMWSEISPSGSRQQYQQQWHFDAAVVNQLAGARDEHNLHTFSTPENSLLSYDSSANSASVHSKSVEDGGVKAALYFSCRRERKNLNQEMKMNQHPMAILLFFFFSLIIHSRCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPSPVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVVAENASDVEIIGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAHWCLHLVXCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKASNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNVNFINITATSENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFLNFHSGYLRE

Homology

[Close]

BLAST of CmaCh06G000830 vs. Swiss-Prot
Match: BH048_ARATH (Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.6e-64
Identity = 169/328 (51.52%), Postives = 205/328 (62.50%), Query Frame = 1


Query: 22  GLESHQFFEEIQGLMTI--PSENASSFTALLELPATQALELLHSPDSAEVKKDDSVHHRV 81
           GLES  F +E + L+T   P     SFTALLE+P TQA+ELLH PDS+  +        +
Sbjct: 19  GLESLNFSDEFRHLVTTMPPETTGGSFTALLEMPVTQAMELLHFPDSSSSQARTVTSGDI 78

Query: 82  KYVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEQ----LPETTSSVPLNSSVSLEKV 141
                  F AL    TFP+NS L +  A+FSV+A EQ      ET +S+P N   +L++V
Sbjct: 79  SPTTLHPFGAL----TFPSNSLLLDRAARFSVIATEQNGNFSGETANSLPSNPGANLDRV 138

Query: 142 KNEPTIETDSNPNHLYPKISDPAVEN-NTNQRSVKRKEREKKGKGSSKKSKNESQEDAEK 201
           K EP  ETDS             VEN N +  S KRKEREKK K S+KK  N+S  +++K
Sbjct: 139 KAEPA-ETDS------------MVENQNQSYSSGKRKEREKKVKSSTKK--NKSSVESDK 198

Query: 202 LPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQ 261
           LPYVHVRA RGQATD HSLAERARREKINARMKLLQELVPGC+KI GTALVLDEIINHVQ
Sbjct: 199 LPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQ 258

Query: 262 SLQRQVEFLSMRLAAVNPRVDFNIDSILAAENEPVHESNLPTMVMPLMWSEISPSGSRQQ 321
           +LQRQVE LSMRLAAVNPR+DFN+DSILA+EN  + + +               +     
Sbjct: 259 TLQRQVEMLSMRLAAVNPRIDFNLDSILASENGSLMDGSF--------------NAESYH 312

Query: 322 YQQQWHFDAAVVNQLAGARDEHNLHTFS 343
             QQW FD     +  G  ++H+   FS
Sbjct: 319 QLQQWPFDGYHQPEW-GREEDHHQANFS 312

[Close]

BLAST of CmaCh06G000830 vs. Swiss-Prot
Match: BH060_ARATH (Transcription factor bHLH60 OS=Arabidopsis thaliana GN=BHLH60 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.9e-45
Identity = 169/426 (39.67%), Postives = 221/426 (51.88%), Query Frame = 1


Query: 9   GGSSPIRRQLNYTGLESHQFFEEIQGLMT-IPSEN-ASSFTALLELPATQALELLHSPDS 68
           GG  P R  +   GLES    +E + L+T +P EN   SFTALLELP TQA+ELLH  DS
Sbjct: 12  GGVGPCREPI---GLESLHLGDEFRQLVTTLPPENPGGSFTALLELPPTQAVELLHFTDS 71

Query: 69  AEVKKDDSVHHRVKYVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEQLP-----ET- 128
           +   +  +V      +P P  S     L FP+NS L E  A+FSV+A EQ       ET 
Sbjct: 72  SS-SQQAAVTGIGGEIPPPLHS-FGGTLAFPSNSVLMERAARFSVIATEQQNGNISGETP 131

Query: 129 TSSVPLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPAVEN-----NTNQRSVKRKEREK 188
           TSSVP NSS +L++VK EP  ETDS+       ISD A+EN     N N R+ KRK+ EK
Sbjct: 132 TSSVPSNSSANLDRVKTEPA-ETDSSQR----LISDSAIENQIPCPNQNNRNGKRKDFEK 191

Query: 189 KGKGSSKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPG 248
           KGK S+KK  N+S E+ EKLPYVHVRA RGQATD HSLAERARREKINARMKLLQELVPG
Sbjct: 192 KGKSSTKK--NKSSEENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPG 251

Query: 249 CNK--------------------ISGTALVL-------DEIIN------HVQSLQRQVEF 308
           C+K                    ISG  + +       +++I+       +Q     ++ 
Sbjct: 252 CDKGTDFGGKIKIKVCFGVHLLMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDE 311

Query: 309 LSMRLAAVNPRVDFNI--------------DSILAAENEPVHESNLPTMVMPLMWS---- 367
           +   + ++  +V+                 D+ILA+EN  + + +     M L W     
Sbjct: 312 IINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNAAPMQLAWPQQAI 371

[Close]

BLAST of CmaCh06G000830 vs. Swiss-Prot
Match: BH062_ARATH (Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-30
Identity = 108/287 (37.63%), Postives = 152/287 (52.96%), Query Frame = 1


Query: 5   VGTVGGSSPIRRQLNYTGLESHQFFEEIQGLMTIPSENASSFTALLELPATQALELLHSP 64
           VG VGG + I R+L    +       +I G+ T  + N+   T +   P    +E   + 
Sbjct: 76  VGGVGGENVIMREL----IGKLGNIGDIYGI-TASNGNSCYATPMSSPPPGSMMETKTTT 135

Query: 65  DSAEVKKDDSVHHRVKYVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEQLPETTSSV 124
             AE+  D     R        F + + N    +  P+N       +   E++P  +SS 
Sbjct: 136 PMAELSGDPGFAERAARFS--CFGSRSFNSRTNSPFPINNEPP---ITTNEKMPRVSSSP 195

Query: 125 ---PLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPAVENNTNQRSVKRKEREKKGKGSS 184
              PL S V   +   E      S       K + P+  +++ +   K     K+ K S 
Sbjct: 196 VFKPLASHVPAGESSGEL-----SRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSE 255

Query: 185 KKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNKISG 244
           +        D  K  Y+HVRA RGQATD HSLAER RREKI+ RMKLLQ+LVPGCNK++G
Sbjct: 256 ENGDKTKSIDPYK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 315

Query: 245 TALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIDSILAAENEP 289
            AL+LDEIIN+VQSLQRQVEFLSM+L++VN R+DFN+D++L+ +  P
Sbjct: 316 KALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFP 346

[Close]

BLAST of CmaCh06G000830 vs. Swiss-Prot
Match: BH078_ARATH (Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.5e-30
Identity = 79/147 (53.74%), Postives = 104/147 (70.75%), Query Frame = 1


Query: 155 SDPAVENNTNQRSVKRKEREKKGKGSSKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLA 214
           S  + E    +R  +  + E++G+G   KS N    +  K  Y+HVRA RGQATD HSLA
Sbjct: 257 SKSSEEKGGKRRREEEDDEEEEGEGEGNKSNNTKPPEPPK-DYIHVRARRGQATDSHSLA 316

Query: 215 ERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVN-PR 274
           ER RREKI  RMKLLQ+LVPGCNK++G AL+LDEIIN+VQSLQRQVEFLSM+L++VN  R
Sbjct: 317 ERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTR 376

Query: 275 VDFNIDSILA------AENEPVHESNL 295
           +DFN+D++++      + N  +HE  L
Sbjct: 377 LDFNVDALVSKDVMIPSSNNRLHEEGL 402

[Close]

BLAST of CmaCh06G000830 vs. Swiss-Prot
Match: BH063_ARATH (Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.0e-30
Identity = 96/235 (40.85%), Postives = 132/235 (56.17%), Query Frame = 1


Query: 86  YFSALNCNLTFPTNSPLNEHDAKFSVVAEEQLPETTSSVPL-------NSSVSLEKVKNE 145
           Y S    NL         E D++ S+      PETT              +    + K +
Sbjct: 55  YLSTAGLNLPMMYGETTVEGDSRLSIS-----PETTLGTGNFKKRKFDTETKDCNEKKKK 114

Query: 146 PTIETDSNPNHLYPKISDPAVENNTNQRSVKR-KEREKKGKGSSKKSKNESQEDAEKLPY 205
            T+  D        + S    +NN + +S+K+ K + KK + +     ++  ++ EK  Y
Sbjct: 115 MTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDY 174

Query: 206 VHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQ 265
           +HVRA RGQATD HS+AER RREKI+ RMK LQ+LVPGC+KI+G A +LDEIIN+VQSLQ
Sbjct: 175 IHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQ 234

Query: 266 RQVEFLSMRLAAVNPRVDFNIDSILAAE--NEPVHESNLPTMVMPLMWSEISPSG 311
           RQ+EFLSM+LA VNPR DF++D I A E  + P+     P MV+     E+  SG
Sbjct: 235 RQIEFLSMKLAIVNPRPDFDMDDIFAKEVASTPMTVVPSPEMVLSGYSHEMVHSG 284

[Close]

BLAST of CmaCh06G000830 vs. TrEMBL
Match: A0A0A0LBD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G810540 PE=3 SV=1)

HSP 1 Score: 859.4 bits (2219), Expect = 3.8e-246
Identity = 410/459 (89.32%), Postives = 427/459 (93.03%), Query Frame = 1


Query: 396 MAILL-FFFFSLIIHSRCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPS 455
           MAI +  FFF LIIHS   +PSIRL   STSFSVTDFGAIGDG+HYDT AIQSAINSCP+
Sbjct: 3   MAIAIQLFFFLLIIHSHSAIPSIRLLRRSTSFSVTDFGAIGDGLHYDTTAIQSAINSCPA 62

Query: 456 PVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVVAENASD 515
           P RCYV FPPGTYLTATIWL+SGVVLDIQPGATVLAGT+MEDYP DSSRW+AVVAENASD
Sbjct: 63  PSRCYVTFPPGTYLTATIWLRSGVVLDIQPGATVLAGTKMEDYPADSSRWFAVVAENASD 122

Query: 516 VEIIGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVS 575
           V I GGG VDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDL+GFIGS  VRVSNVS
Sbjct: 123 VGISGGGTVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLVGFIGSNKVRVSNVS 182

Query: 576 LNQPAHWCLHLVXCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICP 635
            NQPAHWCLHLV CENT+IEDVSIYGDFDTPNNDGIDIEDSNNT ITRCRIDTGDDAICP
Sbjct: 183 FNQPAHWCLHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICP 242

Query: 636 KASNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGS 695
           K+SNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDN+TIVDSHRGL FQLRDGGS
Sbjct: 243 KSSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNLTIVDSHRGLAFQLRDGGS 302

Query: 696 ANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNVNFINITATSENGVF 755
           ANDITFSN+NI+TRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISN+ F NITATSENGVF
Sbjct: 303 ANDITFSNINITTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNIRFTNITATSENGVF 362

Query: 756 LSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFE 815
           LSGSKSGVLSNLRF NVKL YKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGL+ E
Sbjct: 363 LSGSKSGVLSNLRFTNVKLRYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLNLE 422

Query: 816 NVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFLNFHSGY 854
           NVDM W  D +GSLQWNNPLDFRPSTV+NISFLNFHSGY
Sbjct: 423 NVDMHWF-DTNGSLQWNNPLDFRPSTVNNISFLNFHSGY 460

[Close]

BLAST of CmaCh06G000830 vs. TrEMBL
Match: A0A061EY96_THECC (Pectin lyase-like superfamily protein OS=Theobroma cacao GN=TCM_024827 PE=3 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 1.2e-194
Identity = 330/481 (68.61%), Postives = 380/481 (79.00%), Query Frame = 1


Query: 378 CRRERKNLNQEMKMNQHP---MAILLFFFFSLIIHSRCVVPSIRLPGGSTSFSVTDFGAI 437
           CR++ KN      M  HP   + ++   F   II S         P   ++ SVTDFGA 
Sbjct: 30  CRKQSKN------MGAHPIPQLTVVTLMFLPTIIQSH--------PSTYSTISVTDFGAT 89

Query: 438 GDGVHYDTAAIQSAINSCPSPVR--CYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGT 497
           GDG HYDT+AIQSAI++C +     CYV FPPGTYLTAT++L+S VVL+I  G+ +L GT
Sbjct: 90  GDGKHYDTSAIQSAIDTCHNSTTKPCYVTFPPGTYLTATVFLKSNVVLNIPKGSAILGGT 149

Query: 498 RMEDYPMDSSRWYAVVAENASDVEIIGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYG 557
           ++EDYP    RWY ++AENASDV I GGGVVDGQG +FV KFDKRKNVMVSWN+TGAC+G
Sbjct: 150 KLEDYPKAWDRWYVILAENASDVGITGGGVVDGQGSEFVVKFDKRKNVMVSWNQTGACWG 209

Query: 558 DECRPDLIGFIGSKNVRVSNVSLNQPAHWCLHLVXCENTIIEDVSIYGDFDTPNNDGIDI 617
           DECRP L+GF+ S NVRV NV+L QPA+WCLH+V CENT I DVSIYGDF TPNNDGIDI
Sbjct: 210 DECRPRLVGFLDSTNVRVWNVTLTQPAYWCLHIVRCENTSIHDVSIYGDFYTPNNDGIDI 269

Query: 618 EDSNNTFITRCRIDTGDDAICPKASNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRML 677
           EDSNNT ITRC IDTGDDA+CPK    P+ NLTATNCWIRTKSSAIKLGSASWF F  ++
Sbjct: 270 EDSNNTLITRCHIDTGDDALCPKTYTSPLHNLTATNCWIRTKSSAIKLGSASWFEFKNLV 329

Query: 678 FDNITIVDSHRGLGFQLRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGS 737
           FDNITIVDSHRGLGFQ+RDGG+ +DIT SN+NISTRYYDPSWWGRAEPIYVTTCPRD  S
Sbjct: 330 FDNITIVDSHRGLGFQIRDGGNVSDITVSNINISTRYYDPSWWGRAEPIYVTTCPRDSNS 389

Query: 738 KEGSISNVNFINITATSENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGC 797
            EGSISNVNFINITA SENG+FLSGSK G+L NLRF N+ LTYKRWT Y GG+ DYRPGC
Sbjct: 390 AEGSISNVNFINITANSENGIFLSGSKGGLLRNLRFINMNLTYKRWTNYVGGLVDYRPGC 449

Query: 798 QGFVKHGMAGMIMEHIEGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFLNFHSG 854
           QG V H  AG+IMEHI+GL  ENV+M+W   D  ++QW+NPLDF PSTV+NIS LNFHSG
Sbjct: 450 QGLVNHSAAGIIMEHIDGLDVENVNMRWF--DGRTVQWDNPLDFTPSTVNNISLLNFHSG 494

[Close]

BLAST of CmaCh06G000830 vs. TrEMBL
Match: A0A067KYL7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06814 PE=3 SV=1)

HSP 1 Score: 684.5 bits (1765), Expect = 1.7e-193
Identity = 319/438 (72.83%), Postives = 371/438 (84.70%), Query Frame = 1


Query: 414 VPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPSPVRCYVIFPPGTYLTATIW 473
           + +I+LP  +T+ SVTDFGA GDG+HYDT AIQS I++C S   C+V FPPGTYLTATI 
Sbjct: 27  IATIQLPFQTTTLSVTDFGATGDGLHYDTFAIQSTIDACSSSTTCHVTFPPGTYLTATIR 86

Query: 474 LQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVVAENASDVEIIGGGVVDGQGLKFVEK 533
           L+S V+L+IQ GAT+L GT+MEDYP +  RWY V+AENASDV I GGGVVDGQGLKFV++
Sbjct: 87  LKSKVILNIQKGATLLGGTKMEDYPKEFERWYVVLAENASDVGITGGGVVDGQGLKFVQR 146

Query: 534 FDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAHWCLHLVXCENTII 593
           F+K KNVMVSWN+TGAC GDECRP L+GFIG +NVRV N+ L +PA+WCLH+V C NT+I
Sbjct: 147 FNKIKNVMVSWNQTGACLGDECRPRLVGFIGCRNVRVWNIRLREPAYWCLHIVRCHNTLI 206

Query: 594 EDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKASNGPVFNLTATNCWIRT 653
            DVSIYGDF++PNNDG+DIEDSNNT ITRC I+TGDDAICPK   GP++NLTAT+CWIRT
Sbjct: 207 HDVSIYGDFNSPNNDGMDIEDSNNTVITRCHINTGDDAICPKTYTGPLYNLTATDCWIRT 266

Query: 654 KSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSNMNISTRYYDPS 713
           KSSAIKLGSAS F+F  ++FDNITIVDSHRGLG Q+RDGG+ + ITFSN+ ISTRYYDP 
Sbjct: 267 KSSAIKLGSASLFDFKDLVFDNITIVDSHRGLGLQIRDGGNVDGITFSNIKISTRYYDPL 326

Query: 714 WWGRAEPIYVTTCPRDPGSKEGSISNVNFINITATSENGVFLSGSKSGVLSNLRFNNVKL 773
           WWGRAEPIYVTTCPR+  SKEGSISN+ FINITATSENG+FLSGSK G+LSNLRF N+  
Sbjct: 327 WWGRAEPIYVTTCPRNSSSKEGSISNLLFINITATSENGIFLSGSKGGLLSNLRFINMIF 386

Query: 774 TYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKWSDDDDGSLQWNNP 833
           TY+RWTKY GG+ DYRPGCQG VKHG AG+IMEHIEG   ENV M WSD+     QW+NP
Sbjct: 387 TYRRWTKYAGGLVDYRPGCQGLVKHGAAGIIMEHIEGFEIENVSMIWSDNK--KEQWDNP 446

Query: 834 LDFRPSTVSNISFLNFHS 852
           LDFRPSTV+NISF NFHS
Sbjct: 447 LDFRPSTVNNISFFNFHS 462

[Close]

BLAST of CmaCh06G000830 vs. TrEMBL
Match: B9II39_POPTR (Glycoside hydrolase family 28 family protein OS=Populus trichocarpa GN=POPTR_0016s05170g PE=3 SV=2)

HSP 1 Score: 684.1 bits (1764), Expect = 2.2e-193
Identity = 330/470 (70.21%), Postives = 383/470 (81.49%), Query Frame = 1


Query: 398 ILLFFFFSLIIHSRCVVPS-------IRLPGGS-TSFSVTDFGAIGDGVHYDTAAIQSAI 457
           IL   F  ++   R + PS       I+LP  + T+ SVTDFGAIGDG+HYDT AIQS I
Sbjct: 5   ILQLIFLLILSPLRQLPPSKPATPTRIQLPHPTPTTLSVTDFGAIGDGIHYDTEAIQSTI 64

Query: 458 NSCPS--PVR-CYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYA 517
           NSCP+  P + C+V FPPG YLTATI L+S VVL+IQ GAT+L GT++EDYP + +RWY 
Sbjct: 65  NSCPTTPPTKACHVNFPPGIYLTATIHLKSNVVLNIQEGATLLGGTKLEDYPKEFNRWYV 124

Query: 518 VVAENASDVEIIGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSK 577
           V+AENASDV I GGGVVDGQGLKFV++F++RKNVMVSWN TGAC GDECRP L+GFIG  
Sbjct: 125 VLAENASDVGITGGGVVDGQGLKFVKRFNERKNVMVSWNSTGACLGDECRPRLVGFIGCT 184

Query: 578 NVRVSNVSLNQPAHWCLHLVXCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRID 637
           NV+V NV L++PA+WCLH+V C NT I DVSIYGDF++PNNDGIDIEDSNNT ITRC ID
Sbjct: 185 NVKVWNVRLSEPAYWCLHIVQCLNTHISDVSIYGDFNSPNNDGIDIEDSNNTLITRCHID 244

Query: 638 TGDDAICPKASNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLG 697
           TGDDAICPK   GP++NLTAT+CWIRTKSSAIKLGSASWF F  ++FDNITIVDSHRGLG
Sbjct: 245 TGDDAICPKTYTGPIYNLTATDCWIRTKSSAIKLGSASWFEFKGLVFDNITIVDSHRGLG 304

Query: 698 FQLRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNVNFINIT 757
            Q+RDGG+ +DITFSN+NISTRYYDPSWWGRAEPIYVTTCPR   SKEGSISN+ FINIT
Sbjct: 305 LQIRDGGNVSDITFSNINISTRYYDPSWWGRAEPIYVTTCPRHSSSKEGSISNLQFINIT 364

Query: 758 ATSENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIME 817
             SENGVFLSGSK G+LSNLRF N+ LT++RWT Y GG+ DYRPGCQG V H  AG+IME
Sbjct: 365 TNSENGVFLSGSKGGLLSNLRFINMNLTFRRWTTYPGGLVDYRPGCQGLVNHSAAGIIME 424

Query: 818 HIEGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFLNFHSGYLRE 857
           HIEG   ENV+M+WSD  +    W+NPLDFRPSTV+NISFLNFHS   ++
Sbjct: 425 HIEGFEVENVNMRWSDYQNE--PWDNPLDFRPSTVNNISFLNFHSALYKQ 472

[Close]

BLAST of CmaCh06G000830 vs. TrEMBL
Match: A0A059A3Z7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01816 PE=3 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 2.7e-191
Identity = 317/444 (71.40%), Postives = 366/444 (82.43%), Query Frame = 1


Query: 415 PSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPSPVR-------CYVIFPPGTY 474
           P   +PG   SFSV DFGA GDG  YDTAAIQ AI++C +          C V FPPG Y
Sbjct: 31  PPPPVPGPGASFSVRDFGAAGDGCRYDTAAIQDAIDACHAHAAAAAAGCTCRVAFPPGRY 90

Query: 475 LTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVVAENASDVEIIGGGVVDGQG 534
           LTAT+ L+SGVVLDIQ GATVL GT + +YP ++ RWY ++AE A DV I GGG VDGQG
Sbjct: 91  LTATVRLKSGVVLDIQSGATVLGGTEIGNYPREADRWYVILAEGARDVGITGGGAVDGQG 150

Query: 535 LKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAHWCLHLVX 594
           L+FV +FD+RKNVMVSWNKTGAC GDECRP L+GF+G  NV V NVSLNQPA+WCLH+V 
Sbjct: 151 LEFVRRFDERKNVMVSWNKTGACLGDECRPRLVGFVGCTNVHVWNVSLNQPAYWCLHIVR 210

Query: 595 CENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKASNGPVFNLTAT 654
           C NT I DVSIYGDF+TPNNDGIDI+DSN+T ITRC+IDTGDDAICPK   GP++NLTAT
Sbjct: 211 CVNTFIHDVSIYGDFNTPNNDGIDIDDSNHTVITRCKIDTGDDAICPKTYTGPLYNLTAT 270

Query: 655 NCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSNMNIST 714
           +CWIRTKSSAIKLGSASWF+F  ++FDNITIV+SHRGLG Q+RDGG+ NDITFSN+ IST
Sbjct: 271 DCWIRTKSSAIKLGSASWFDFRGLVFDNITIVESHRGLGMQIRDGGNVNDITFSNIKIST 330

Query: 715 RYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNVNFINITATSENGVFLSGSKSGVLSNLR 774
           RYY PSWWGRAEPIY+TTCPR   SKEG++SN+ FINITA SENGVFLSGSK G+L NLR
Sbjct: 331 RYYHPSWWGRAEPIYITTCPRHSWSKEGAVSNIRFINITADSENGVFLSGSKGGLLRNLR 390

Query: 775 FNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKWSDDDDGS 834
           F+NV LTYKRWT Y GG+ADYRPGCQG VKHGMAG+IMEHI+GL  ENV+M+W+D+   S
Sbjct: 391 FSNVNLTYKRWTSYEGGLADYRPGCQGLVKHGMAGIIMEHIKGLEIENVNMRWADEK--S 450

Query: 835 LQWNNPLDFRPSTVSNISFLNFHS 852
            QW+NPLDFRPSTV+ ISF +FHS
Sbjct: 451 WQWDNPLDFRPSTVNGISFRDFHS 472

[Close]

BLAST of CmaCh06G000830 vs. TAIR10
Match: AT3G57790.1 (AT3G57790.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 641.0 bits (1652), Expect = 1.1e-183
Identity = 300/464 (64.66%), Postives = 368/464 (79.31%), Query Frame = 1


Query: 398 ILLFFFFSLI-IHSRCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPSPV 457
           +LL  FFSL+   S      I+LPG S + SVTDFGA GDG++YDT+AIQS I++C    
Sbjct: 6   LLLLLFFSLVQSRSDTSYSKIQLPGDSLTLSVTDFGATGDGINYDTSAIQSTIDACNRHY 65

Query: 458 R-----CYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDY-PMD-SSRWYAVVA 517
                 C V+FP G YLTA + L+SGV+LD+   A +L G R+EDY P + SS WY VVA
Sbjct: 66  TSFSSICRVVFPSGNYLTAKLHLRSGVILDVTENAVLLGGPRIEDYYPAETSSDWYVVVA 125

Query: 518 ENASDVEIIGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVR 577
            NA+DV I GGG +DGQG KFV +FD++KNVMVSWN+TGAC GDECRP L+GF+ S NV 
Sbjct: 126 NNATDVGITGGGAIDGQGSKFVVRFDEKKNVMVSWNQTGACLGDECRPRLVGFVDSINVE 185

Query: 578 VSNVSLNQPAHWCLHLVXCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGD 637
           + N++L +PA+WCLH+V CENT + DVSI GDF+TPNNDGIDIEDSNNT ITRC IDTGD
Sbjct: 186 IWNITLREPAYWCLHIVRCENTSVHDVSILGDFNTPNNDGIDIEDSNNTVITRCHIDTGD 245

Query: 638 DAICPKASNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQL 697
           DAICPK   GP++NLTAT+CWIRTKSSAIKLGSASWF+F  ++FDNITI +SHRGLG Q+
Sbjct: 246 DAICPKTYTGPLYNLTATDCWIRTKSSAIKLGSASWFDFKGLVFDNITIFESHRGLGMQI 305

Query: 698 RDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNVNFINITATS 757
           RDGG+ +D+TFSN+NISTRYYDPSWWGRAEPIY+TTCPRD  +KEGSISN+ F+NIT  S
Sbjct: 306 RDGGNVSDVTFSNINISTRYYDPSWWGRAEPIYITTCPRDSSAKEGSISNLLFVNITIDS 365

Query: 758 ENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKH-GMAGMIMEHI 817
           ENGVFLSGS +G+LS+++F N+ LT++RW+ Y  G+ DYRPGCQG V H   +G+IMEH+
Sbjct: 366 ENGVFLSGSPNGLLSDIKFKNMNLTFRRWSNYSAGLVDYRPGCQGLVNHRATSGIIMEHV 425

Query: 818 EGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFLNFHSG 853
            G   ENVD+KWSDDDD +  WN PL+FRPSTV+N+SF+ F SG
Sbjct: 426 NGFRVENVDLKWSDDDDVNAAWNVPLEFRPSTVNNVSFVGFTSG 469

[Close]

BLAST of CmaCh06G000830 vs. TAIR10
Match: AT2G42300.1 (AT2G42300.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 249.2 bits (635), Expect = 9.1e-66
Identity = 169/328 (51.52%), Postives = 205/328 (62.50%), Query Frame = 1


Query: 22  GLESHQFFEEIQGLMTI--PSENASSFTALLELPATQALELLHSPDSAEVKKDDSVHHRV 81
           GLES  F +E + L+T   P     SFTALLE+P TQA+ELLH PDS+  +        +
Sbjct: 19  GLESLNFSDEFRHLVTTMPPETTGGSFTALLEMPVTQAMELLHFPDSSSSQARTVTSGDI 78

Query: 82  KYVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEQ----LPETTSSVPLNSSVSLEKV 141
                  F AL    TFP+NS L +  A+FSV+A EQ      ET +S+P N   +L++V
Sbjct: 79  SPTTLHPFGAL----TFPSNSLLLDRAARFSVIATEQNGNFSGETANSLPSNPGANLDRV 138

Query: 142 KNEPTIETDSNPNHLYPKISDPAVEN-NTNQRSVKRKEREKKGKGSSKKSKNESQEDAEK 201
           K EP  ETDS             VEN N +  S KRKEREKK K S+KK  N+S  +++K
Sbjct: 139 KAEPA-ETDS------------MVENQNQSYSSGKRKEREKKVKSSTKK--NKSSVESDK 198

Query: 202 LPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQ 261
           LPYVHVRA RGQATD HSLAERARREKINARMKLLQELVPGC+KI GTALVLDEIINHVQ
Sbjct: 199 LPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQ 258

Query: 262 SLQRQVEFLSMRLAAVNPRVDFNIDSILAAENEPVHESNLPTMVMPLMWSEISPSGSRQQ 321
           +LQRQVE LSMRLAAVNPR+DFN+DSILA+EN  + + +               +     
Sbjct: 259 TLQRQVEMLSMRLAAVNPRIDFNLDSILASENGSLMDGSF--------------NAESYH 312

Query: 322 YQQQWHFDAAVVNQLAGARDEHNLHTFS 343
             QQW FD     +  G  ++H+   FS
Sbjct: 319 QLQQWPFDGYHQPEW-GREEDHHQANFS 312

[Close]

BLAST of CmaCh06G000830 vs. TAIR10
Match: AT3G57800.1 (AT3G57800.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-46
Identity = 169/426 (39.67%), Postives = 221/426 (51.88%), Query Frame = 1


Query: 9   GGSSPIRRQLNYTGLESHQFFEEIQGLMT-IPSEN-ASSFTALLELPATQALELLHSPDS 68
           GG  P R  +   GLES    +E + L+T +P EN   SFTALLELP TQA+ELLH  DS
Sbjct: 12  GGVGPCREPI---GLESLHLGDEFRQLVTTLPPENPGGSFTALLELPPTQAVELLHFTDS 71

Query: 69  AEVKKDDSVHHRVKYVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEQLP-----ET- 128
           +   +  +V      +P P  S     L FP+NS L E  A+FSV+A EQ       ET 
Sbjct: 72  SS-SQQAAVTGIGGEIPPPLHS-FGGTLAFPSNSVLMERAARFSVIATEQQNGNISGETP 131

Query: 129 TSSVPLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPAVEN-----NTNQRSVKRKEREK 188
           TSSVP NSS +L++VK EP  ETDS+       ISD A+EN     N N R+ KRK+ EK
Sbjct: 132 TSSVPSNSSANLDRVKTEPA-ETDSSQR----LISDSAIENQIPCPNQNNRNGKRKDFEK 191

Query: 189 KGKGSSKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPG 248
           KGK S+KK  N+S E+ EKLPYVHVRA RGQATD HSLAERARREKINARMKLLQELVPG
Sbjct: 192 KGKSSTKK--NKSSEENEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPG 251

Query: 249 CNK--------------------ISGTALVL-------DEIIN------HVQSLQRQVEF 308
           C+K                    ISG  + +       +++I+       +Q     ++ 
Sbjct: 252 CDKGTDFGGKIKIKVCFGVHLLMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDE 311

Query: 309 LSMRLAAVNPRVDFNI--------------DSILAAENEPVHESNLPTMVMPLMWS---- 367
           +   + ++  +V+                 D+ILA+EN  + + +     M L W     
Sbjct: 312 IINHVQSLQRQVEMLSMRLAAVNPRIDFNLDTILASENGSLMDGSFNAAPMQLAWPQQAI 371

[Close]

BLAST of CmaCh06G000830 vs. TAIR10
Match: AT3G07340.1 (AT3G07340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 6.6e-32
Identity = 108/287 (37.63%), Postives = 152/287 (52.96%), Query Frame = 1


Query: 5   VGTVGGSSPIRRQLNYTGLESHQFFEEIQGLMTIPSENASSFTALLELPATQALELLHSP 64
           VG VGG + I R+L    +       +I G+ T  + N+   T +   P    +E   + 
Sbjct: 76  VGGVGGENVIMREL----IGKLGNIGDIYGI-TASNGNSCYATPMSSPPPGSMMETKTTT 135

Query: 65  DSAEVKKDDSVHHRVKYVPKPYFSALNCNLTFPTNSPLNEHDAKFSVVAEEQLPETTSSV 124
             AE+  D     R        F + + N    +  P+N       +   E++P  +SS 
Sbjct: 136 PMAELSGDPGFAERAARFS--CFGSRSFNSRTNSPFPINNEPP---ITTNEKMPRVSSSP 195

Query: 125 ---PLNSSVSLEKVKNEPTIETDSNPNHLYPKISDPAVENNTNQRSVKRKEREKKGKGSS 184
              PL S V   +   E      S       K + P+  +++ +   K     K+ K S 
Sbjct: 196 VFKPLASHVPAGESSGEL-----SRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSE 255

Query: 185 KKSKNESQEDAEKLPYVHVRAGRGQATDKHSLAERARREKINARMKLLQELVPGCNKISG 244
           +        D  K  Y+HVRA RGQATD HSLAER RREKI+ RMKLLQ+LVPGCNK++G
Sbjct: 256 ENGDKTKSIDPYK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTG 315

Query: 245 TALVLDEIINHVQSLQRQVEFLSMRLAAVNPRVDFNIDSILAAENEP 289
            AL+LDEIIN+VQSLQRQVEFLSM+L++VN R+DFN+D++L+ +  P
Sbjct: 316 KALMLDEIINYVQSLQRQVEFLSMKLSSVNTRLDFNMDALLSKDIFP 346

[Close]

BLAST of CmaCh06G000830 vs. TAIR10
Match: AT5G48560.1 (AT5G48560.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 136.3 bits (342), Expect = 8.6e-32
Identity = 79/147 (53.74%), Postives = 104/147 (70.75%), Query Frame = 1


Query: 155 SDPAVENNTNQRSVKRKEREKKGKGSSKKSKNESQEDAEKLPYVHVRAGRGQATDKHSLA 214
           S  + E    +R  +  + E++G+G   KS N    +  K  Y+HVRA RGQATD HSLA
Sbjct: 257 SKSSEEKGGKRRREEEDDEEEEGEGEGNKSNNTKPPEPPK-DYIHVRARRGQATDSHSLA 316

Query: 215 ERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMRLAAVN-PR 274
           ER RREKI  RMKLLQ+LVPGCNK++G AL+LDEIIN+VQSLQRQVEFLSM+L++VN  R
Sbjct: 317 ERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSVNDTR 376

Query: 275 VDFNIDSILA------AENEPVHESNL 295
           +DFN+D++++      + N  +HE  L
Sbjct: 377 LDFNVDALVSKDVMIPSSNNRLHEEGL 402

[Close]

BLAST of CmaCh06G000830 vs. NCBI nr
Match: gi|659084826|ref|XP_008443094.1| (PREDICTED: polygalacturonase ADPG2 [Cucumis melo])

HSP 1 Score: 874.4 bits (2258), Expect = 1.6e-250
Identity = 415/456 (91.01%), Postives = 429/456 (94.08%), Query Frame = 1


Query: 398 ILLFFFFSLIIHSRCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPSPVR 457
           +  FFFF LIIHS   +PSIRL   STSFSVTDFGAIGDG+HYDTAAIQSAINSCP+P R
Sbjct: 9   LFFFFFFLLIIHSHSAIPSIRLLRRSTSFSVTDFGAIGDGLHYDTAAIQSAINSCPAPSR 68

Query: 458 CYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVVAENASDVEI 517
           CYV FPPGTYLTATIWL+SGVVLDIQPGATVLAGT+MEDYP DSSRWYAVVAENASDV I
Sbjct: 69  CYVTFPPGTYLTATIWLRSGVVLDIQPGATVLAGTKMEDYPGDSSRWYAVVAENASDVGI 128

Query: 518 IGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQ 577
            GGG VDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDL+GFIGS NVRVSNVS NQ
Sbjct: 129 SGGGTVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLVGFIGSNNVRVSNVSFNQ 188

Query: 578 PAHWCLHLVXCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKAS 637
           PAHWCLHLV CENT+IEDVSIYGDFDTPNNDGIDIEDSNNT ITRCRIDTGDDAICPK+S
Sbjct: 189 PAHWCLHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICPKSS 248

Query: 638 NGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSAND 697
           NGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSAND
Sbjct: 249 NGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSAND 308

Query: 698 ITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNVNFINITATSENGVFLSG 757
           ITFSN+NI+TRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISN+ FINITATSENGVFLSG
Sbjct: 309 ITFSNINITTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNIRFINITATSENGVFLSG 368

Query: 758 SKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVD 817
           SKSGVLSNLRF NVKL YKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGL+ ENVD
Sbjct: 369 SKSGVLSNLRFTNVKLRYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLNLENVD 428

Query: 818 MKWSDDDDGSLQWNNPLDFRPSTVSNISFLNFHSGY 854
           M WS D DGSLQWNNPLDFRPSTV+NISF NFHSGY
Sbjct: 429 MNWS-DTDGSLQWNNPLDFRPSTVNNISFFNFHSGY 463

[Close]

BLAST of CmaCh06G000830 vs. NCBI nr
Match: gi|449437609|ref|XP_004136584.1| (PREDICTED: polygalacturonase ADPG2 [Cucumis sativus])

HSP 1 Score: 859.4 bits (2219), Expect = 5.4e-246
Identity = 410/459 (89.32%), Postives = 427/459 (93.03%), Query Frame = 1


Query: 396 MAILL-FFFFSLIIHSRCVVPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPS 455
           MAI +  FFF LIIHS   +PSIRL   STSFSVTDFGAIGDG+HYDT AIQSAINSCP+
Sbjct: 3   MAIAIQLFFFLLIIHSHSAIPSIRLLRRSTSFSVTDFGAIGDGLHYDTTAIQSAINSCPA 62

Query: 456 PVRCYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVVAENASD 515
           P RCYV FPPGTYLTATIWL+SGVVLDIQPGATVLAGT+MEDYP DSSRW+AVVAENASD
Sbjct: 63  PSRCYVTFPPGTYLTATIWLRSGVVLDIQPGATVLAGTKMEDYPADSSRWFAVVAENASD 122

Query: 516 VEIIGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVS 575
           V I GGG VDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDL+GFIGS  VRVSNVS
Sbjct: 123 VGISGGGTVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLVGFIGSNKVRVSNVS 182

Query: 576 LNQPAHWCLHLVXCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICP 635
            NQPAHWCLHLV CENT+IEDVSIYGDFDTPNNDGIDIEDSNNT ITRCRIDTGDDAICP
Sbjct: 183 FNQPAHWCLHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTLITRCRIDTGDDAICP 242

Query: 636 KASNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGS 695
           K+SNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDN+TIVDSHRGL FQLRDGGS
Sbjct: 243 KSSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNLTIVDSHRGLAFQLRDGGS 302

Query: 696 ANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNVNFINITATSENGVF 755
           ANDITFSN+NI+TRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISN+ F NITATSENGVF
Sbjct: 303 ANDITFSNINITTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNIRFTNITATSENGVF 362

Query: 756 LSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFE 815
           LSGSKSGVLSNLRF NVKL YKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGL+ E
Sbjct: 363 LSGSKSGVLSNLRFTNVKLRYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLNLE 422

Query: 816 NVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFLNFHSGY 854
           NVDM W  D +GSLQWNNPLDFRPSTV+NISFLNFHSGY
Sbjct: 423 NVDMHWF-DTNGSLQWNNPLDFRPSTVNNISFLNFHSGY 460

[Close]

BLAST of CmaCh06G000830 vs. NCBI nr
Match: gi|1009161671|ref|XP_015899021.1| (PREDICTED: exo-poly-alpha-D-galacturonosidase [Ziziphus jujuba])

HSP 1 Score: 694.9 bits (1792), Expect = 1.8e-196
Identity = 330/463 (71.27%), Postives = 384/463 (82.94%), Query Frame = 1


Query: 394 HPMAILLFFF-FSLIIHSRCVVPSI-RLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINS 453
           H  +I+ F F F L+       P++ RL     + SV DFGAIGDGVH+DTAAIQSAI++
Sbjct: 12  HIQSIIAFIFLFPLLQSQPATSPTLLRLTTLPLTLSVVDFGAIGDGVHHDTAAIQSAIDA 71

Query: 454 CPSPVR--CYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVVA 513
           CP+     CYV FPPG+YLTAT+ L+SGVVLD+Q GA +L GTR+ DYP + SRWY V+A
Sbjct: 72  CPTFTSKVCYVTFPPGSYLTATVRLKSGVVLDVQEGAKILGGTRIGDYPREQSRWYVVLA 131

Query: 514 ENASDVEIIGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVR 573
           ENA+DV I GGGVVDGQGL FV++FD+RKNVMVSWN+TGACYGDECRP L+GFIG KNVR
Sbjct: 132 ENATDVGITGGGVVDGQGLAFVKRFDERKNVMVSWNRTGACYGDECRPRLVGFIGCKNVR 191

Query: 574 VSNVSLNQPAHWCLHLVXCENTIIEDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGD 633
           V NV L QPA+WCLH+V CENT I DVSIYGDF+TPNNDGIDI+DSNNT ITRC IDTGD
Sbjct: 192 VWNVRLTQPAYWCLHIVRCENTSIHDVSIYGDFNTPNNDGIDIDDSNNTIITRCHIDTGD 251

Query: 634 DAICPKASNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQL 693
           DAICPK    P++NLTATNCWIRTKSSAIK GSASWF+F  ++FDNITIVDSHRGLGFQ+
Sbjct: 252 DAICPKTYTAPLYNLTATNCWIRTKSSAIKFGSASWFDFKGLVFDNITIVDSHRGLGFQI 311

Query: 694 RDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISNVNFINITATS 753
           RDGG+ +DITFSN+NI+TRYYDPSWWGRAEPIYVTTCPR   SKEGSISN+ FINITA S
Sbjct: 312 RDGGNVSDITFSNINITTRYYDPSWWGRAEPIYVTTCPRGSRSKEGSISNLLFINITANS 371

Query: 754 ENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIE 813
           ENGVFLSGS+ G+L NLRF N+ +TY++WTKY GG+ DYRPGCQG VKH +AG+IMEHI+
Sbjct: 372 ENGVFLSGSEGGLLRNLRFINMNITYRKWTKYEGGLLDYRPGCQGLVKHSIAGIIMEHID 431

Query: 814 GLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFLNFHSG 853
           G   ENV+M+W D+     +WNNPLDFRPSTV+NIS LNFHSG
Sbjct: 432 GFEVENVNMRWFDNH--LRRWNNPLDFRPSTVNNISLLNFHSG 472

[Close]

BLAST of CmaCh06G000830 vs. NCBI nr
Match: gi|590636631|ref|XP_007028900.1| (Pectin lyase-like superfamily protein [Theobroma cacao])

HSP 1 Score: 688.3 bits (1775), Expect = 1.7e-194
Identity = 330/481 (68.61%), Postives = 380/481 (79.00%), Query Frame = 1


Query: 378 CRRERKNLNQEMKMNQHP---MAILLFFFFSLIIHSRCVVPSIRLPGGSTSFSVTDFGAI 437
           CR++ KN      M  HP   + ++   F   II S         P   ++ SVTDFGA 
Sbjct: 30  CRKQSKN------MGAHPIPQLTVVTLMFLPTIIQSH--------PSTYSTISVTDFGAT 89

Query: 438 GDGVHYDTAAIQSAINSCPSPVR--CYVIFPPGTYLTATIWLQSGVVLDIQPGATVLAGT 497
           GDG HYDT+AIQSAI++C +     CYV FPPGTYLTAT++L+S VVL+I  G+ +L GT
Sbjct: 90  GDGKHYDTSAIQSAIDTCHNSTTKPCYVTFPPGTYLTATVFLKSNVVLNIPKGSAILGGT 149

Query: 498 RMEDYPMDSSRWYAVVAENASDVEIIGGGVVDGQGLKFVEKFDKRKNVMVSWNKTGACYG 557
           ++EDYP    RWY ++AENASDV I GGGVVDGQG +FV KFDKRKNVMVSWN+TGAC+G
Sbjct: 150 KLEDYPKAWDRWYVILAENASDVGITGGGVVDGQGSEFVVKFDKRKNVMVSWNQTGACWG 209

Query: 558 DECRPDLIGFIGSKNVRVSNVSLNQPAHWCLHLVXCENTIIEDVSIYGDFDTPNNDGIDI 617
           DECRP L+GF+ S NVRV NV+L QPA+WCLH+V CENT I DVSIYGDF TPNNDGIDI
Sbjct: 210 DECRPRLVGFLDSTNVRVWNVTLTQPAYWCLHIVRCENTSIHDVSIYGDFYTPNNDGIDI 269

Query: 618 EDSNNTFITRCRIDTGDDAICPKASNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRML 677
           EDSNNT ITRC IDTGDDA+CPK    P+ NLTATNCWIRTKSSAIKLGSASWF F  ++
Sbjct: 270 EDSNNTLITRCHIDTGDDALCPKTYTSPLHNLTATNCWIRTKSSAIKLGSASWFEFKNLV 329

Query: 678 FDNITIVDSHRGLGFQLRDGGSANDITFSNMNISTRYYDPSWWGRAEPIYVTTCPRDPGS 737
           FDNITIVDSHRGLGFQ+RDGG+ +DIT SN+NISTRYYDPSWWGRAEPIYVTTCPRD  S
Sbjct: 330 FDNITIVDSHRGLGFQIRDGGNVSDITVSNINISTRYYDPSWWGRAEPIYVTTCPRDSNS 389

Query: 738 KEGSISNVNFINITATSENGVFLSGSKSGVLSNLRFNNVKLTYKRWTKYGGGIADYRPGC 797
            EGSISNVNFINITA SENG+FLSGSK G+L NLRF N+ LTYKRWT Y GG+ DYRPGC
Sbjct: 390 AEGSISNVNFINITANSENGIFLSGSKGGLLRNLRFINMNLTYKRWTNYVGGLVDYRPGC 449

Query: 798 QGFVKHGMAGMIMEHIEGLSFENVDMKWSDDDDGSLQWNNPLDFRPSTVSNISFLNFHSG 854
           QG V H  AG+IMEHI+GL  ENV+M+W   D  ++QW+NPLDF PSTV+NIS LNFHSG
Sbjct: 450 QGLVNHSAAGIIMEHIDGLDVENVNMRWF--DGRTVQWDNPLDFTPSTVNNISLLNFHSG 494

[Close]

BLAST of CmaCh06G000830 vs. NCBI nr
Match: gi|802600765|ref|XP_012073031.1| (PREDICTED: polygalacturonase ADPG2 [Jatropha curcas])

HSP 1 Score: 684.5 bits (1765), Expect = 2.4e-193
Identity = 319/438 (72.83%), Postives = 371/438 (84.70%), Query Frame = 1


Query: 414 VPSIRLPGGSTSFSVTDFGAIGDGVHYDTAAIQSAINSCPSPVRCYVIFPPGTYLTATIW 473
           + +I+LP  +T+ SVTDFGA GDG+HYDT AIQS I++C S   C+V FPPGTYLTATI 
Sbjct: 27  IATIQLPFQTTTLSVTDFGATGDGLHYDTFAIQSTIDACSSSTTCHVTFPPGTYLTATIR 86

Query: 474 LQSGVVLDIQPGATVLAGTRMEDYPMDSSRWYAVVAENASDVEIIGGGVVDGQGLKFVEK 533
           L+S V+L+IQ GAT+L GT+MEDYP +  RWY V+AENASDV I GGGVVDGQGLKFV++
Sbjct: 87  LKSKVILNIQKGATLLGGTKMEDYPKEFERWYVVLAENASDVGITGGGVVDGQGLKFVQR 146

Query: 534 FDKRKNVMVSWNKTGACYGDECRPDLIGFIGSKNVRVSNVSLNQPAHWCLHLVXCENTII 593
           F+K KNVMVSWN+TGAC GDECRP L+GFIG +NVRV N+ L +PA+WCLH+V C NT+I
Sbjct: 147 FNKIKNVMVSWNQTGACLGDECRPRLVGFIGCRNVRVWNIRLREPAYWCLHIVRCHNTLI 206

Query: 594 EDVSIYGDFDTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKASNGPVFNLTATNCWIRT 653
            DVSIYGDF++PNNDG+DIEDSNNT ITRC I+TGDDAICPK   GP++NLTAT+CWIRT
Sbjct: 207 HDVSIYGDFNSPNNDGMDIEDSNNTVITRCHINTGDDAICPKTYTGPLYNLTATDCWIRT 266

Query: 654 KSSAIKLGSASWFNFTRMLFDNITIVDSHRGLGFQLRDGGSANDITFSNMNISTRYYDPS 713
           KSSAIKLGSAS F+F  ++FDNITIVDSHRGLG Q+RDGG+ + ITFSN+ ISTRYYDP 
Sbjct: 267 KSSAIKLGSASLFDFKDLVFDNITIVDSHRGLGLQIRDGGNVDGITFSNIKISTRYYDPL 326

Query: 714 WWGRAEPIYVTTCPRDPGSKEGSISNVNFINITATSENGVFLSGSKSGVLSNLRFNNVKL 773
           WWGRAEPIYVTTCPR+  SKEGSISN+ FINITATSENG+FLSGSK G+LSNLRF N+  
Sbjct: 327 WWGRAEPIYVTTCPRNSSSKEGSISNLLFINITATSENGIFLSGSKGGLLSNLRFINMIF 386

Query: 774 TYKRWTKYGGGIADYRPGCQGFVKHGMAGMIMEHIEGLSFENVDMKWSDDDDGSLQWNNP 833
           TY+RWTKY GG+ DYRPGCQG VKHG AG+IMEHIEG   ENV M WSD+     QW+NP
Sbjct: 387 TYRRWTKYAGGLVDYRPGCQGLVKHGAAGIIMEHIEGFEIENVSMIWSDNK--KEQWDNP 446

Query: 834 LDFRPSTVSNISFLNFHS 852
           LDFRPSTV+NISF NFHS
Sbjct: 447 LDFRPSTVNNISFFNFHS 462

The following BLAST results are available for this feature:

BLAST of CmaCh06G000830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH048_ARATH	1.6e-64	51.52	Transcription factor bHLH48 OS=Arabidopsis thaliana GN=BHLH48 PE=2 SV=1	[more]
BH060_ARATH	2.9e-45	39.67	Transcription factor bHLH60 OS=Arabidopsis thaliana GN=BHLH60 PE=2 SV=1	[more]
BH062_ARATH	1.2e-30	37.63	Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1	[more]
BH078_ARATH	1.5e-30	53.74	Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=1 SV=1	[more]
BH063_ARATH	2.0e-30	40.85	Transcription factor bHLH63 OS=Arabidopsis thaliana GN=BHLH63 PE=1 SV=1	[more]

BLAST of CmaCh06G000830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBD7_CUCSA	3.8e-246	89.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G810540 PE=3 SV=1	[more]
A0A061EY96_THECC	1.2e-194	68.61	Pectin lyase-like superfamily protein OS=Theobroma cacao GN=TCM_024827 PE=3 SV=1	[more]
A0A067KYL7_JATCU	1.7e-193	72.83	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06814 PE=3 SV=1	[more]
B9II39_POPTR	2.2e-193	70.21	Glycoside hydrolase family 28 family protein OS=Populus trichocarpa GN=POPTR_001...	[more]
A0A059A3Z7_EUCGR	2.7e-191	71.40	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K01816 PE=3 SV=1	[more]

BLAST of CmaCh06G000830 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57790.1	1.1e-183	64.66	Pectin lyase-like superfamily protein	[more]
AT2G42300.1	9.1e-66	51.52	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G57800.1	1.6e-46	39.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G07340.1	6.6e-32	37.63	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G48560.1	8.6e-32	53.74	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of CmaCh06G000830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659084826\|ref\|XP_008443094.1\|	1.6e-250	91.01	PREDICTED: polygalacturonase ADPG2 [Cucumis melo]	[more]
gi\|449437609\|ref\|XP_004136584.1\|	5.4e-246	89.32	PREDICTED: polygalacturonase ADPG2 [Cucumis sativus]	[more]
gi\|1009161671\|ref\|XP_015899021.1\|	1.8e-196	71.27	PREDICTED: exo-poly-alpha-D-galacturonosidase [Ziziphus jujuba]	[more]
gi\|590636631\|ref\|XP_007028900.1\|	1.7e-194	68.61	Pectin lyase-like superfamily protein [Theobroma cacao]	[more]
gi\|802600765\|ref\|XP_012073031.1\|	2.4e-193	72.83	PREDICTED: polygalacturonase ADPG2 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000743	Glyco_hydro_28
IPR011050	Pectin_lyase_fold/virulence
IPR011598	bHLH_dom
IPR012334	Pectin_lyas_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity
GO:0046983	protein dimerization activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071555	cell wall organization
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0047911	galacturan 1,4-alpha-galacturonidase activity
molecular_function	GO:0004650	polygalacturonase activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G000830.1	CmaCh06G000830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 504..775 score: 3.2
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 418..784 score: 7.79
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 208..274 score: 5.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 210..257 score: 1.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 212..262 score: 2.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 206..256 score: 14
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 204..275 score: 1.83
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 424..777 score: 1.4
None	No IPR available	unknown	Coil	Coil	coord: 246..266 scor
None	No IPR available	PANTHER	PTHR31339	FAMILY NOT NAMED	coord: 424..834 score: 8.4E
None	No IPR available	PANTHER	PTHR31339:SF10	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 424..834 score: 8.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh06G000830	Cucsa.242940	Cucumber (Gy14) v1	cgycmaB0682
CmaCh06G000830	Cla017515	Watermelon (97103) v1	cmawmB781
CmaCh06G000830	Csa3G810530	Cucumber (Chinese Long) v2	cmacuB826
CmaCh06G000830	MELO3C009654	Melon (DHL92) v3.5.1	cmameB752
CmaCh06G000830	ClCG10G017300	Watermelon (Charleston Gray)	cmawcgB720
CmaCh06G000830	CSPI03G36750	Wild cucumber (PI 183967)	cmacpiB839
CmaCh06G000830	CmoCh06G000750	Cucurbita moschata (Rifu)	cmacmoB829
CmaCh06G000830	CmoCh14G004430	Cucurbita moschata (Rifu)	cmacmoB798
CmaCh06G000830	Lsi03G017090	Bottle gourd (USVL1VR-Ls)	cmalsiB751
CmaCh06G000830	Cp4.1LG03g03870	Cucurbita pepo (Zucchini)	cmacpeB838
CmaCh06G000830	Cp4.1LG08g13890	Cucurbita pepo (Zucchini)	cmacpeB846
CmaCh06G000830	MELO3C009654.2	Melon (DHL92) v3.6.1	cmamedB852
CmaCh06G000830	CsaV3_3G039100	Cucumber (Chinese Long) v3	cmacucB0976
CmaCh06G000830	Cla97C10G200130	Watermelon (97103) v2	cmawmbB838
CmaCh06G000830	CsGy3G034180	Cucumber (Gy14) v2	cgybcmaB439
CmaCh06G000830	Carg03551	Silver-seed gourd	carcmaB0349
CmaCh06G000830	Carg01239	Silver-seed gourd	carcmaB0216

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh06G000830	CmaCh14G004380	Cucurbita maxima (Rimu)	cmacmaB286

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh06G000830	Cucurbita pepo (Zucchini)	cmacpeB832
CmaCh06G000830	Wax gourd	cmawgoB0987