CmaCh06G000230 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G000230
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	TGACG-sequence-specific DNA-binding protein TGA-2.1
Location	Cma_Chr06 : 143293 .. 143979 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAAGACACCAGCAGAGCGGTGTTTCCTGTGGATTGGTGGCTTCCGTTCATCTGAGATCCTAAAGGTAAGAAATTATGTAGGTGGTAAGCATATGAAAGTAGAGGAAGAAAACATTTATAGGTTGGTGCTTACATGAAGTTAATGCAGCTTCTTGTAAGCCAATTGGAGCCTTTGACCGAGCAGCAAGTAGCGGAAATCTGCAACCTGCAACAATTATCACAACAGGCAGAAGATGCTCTCTCACAAGGAATGGATGCATTGCAGCAATCCTTGGCTGAAACGTTGGCCAGTGGCACGCCTGCTACGTCGGGGTCATCAGGTAATGTGGCTAATTATATGGGTCAAATGGCCATGGCAATGGGAAAGCTTGGAACTCTTGATGGCTTCCTACGCCAGGTAATTTGGTTTTATATTTTATGTCACTCTGTTCCATCTTGTTACATTTATACCTTGCTTATGCAACGAACAAGTAAAGTTGAAATCTTTGTCCATGTTTTCTCACTTTCATTTTTCCTTCTCTTTCTATAACTTGCAGGCCGATAATCTTCGTCAACAAACACTTCAACAAATGCATCGCATATTGACAACCCGTCAATCGGCTCGTGCGCTTCTTGCAATAAACGACTACTTCTCCCGCCTTCGAGCTCTAAGCTCTCTCTGGCTTGCACGGCCACGAGAGTGA

mRNA sequence

ATGTGGAAGACACCAGCAGAGCGGTGTTTCCTGTGGATTGGTGGCTTCCGTTCATCTGAGATCCTAAAGCTTCTTGTAAGCCAATTGGAGCCTTTGACCGAGCAGCAAGTAGCGGAAATCTGCAACCTGCAACAATTATCACAACAGGCAGAAGATGCTCTCTCACAAGGAATGGATGCATTGCAGCAATCCTTGGCTGAAACGTTGGCCAGTGGCACGCCTGCTACGTCGGGGTCATCAGGTAATGTGGCTAATTATATGGGTCAAATGGCCATGGCAATGGGAAAGCTTGGAACTCTTGATGGCTTCCTACGCCAGGCCGATAATCTTCGTCAACAAACACTTCAACAAATGCATCGCATATTGACAACCCGTCAATCGGCTCGTGCGCTTCTTGCAATAAACGACTACTTCTCCCGCCTTCGAGCTCTAAGCTCTCTCTGGCTTGCACGGCCACGAGAGTGA

Coding sequence (CDS)

ATGTGGAAGACACCAGCAGAGCGGTGTTTCCTGTGGATTGGTGGCTTCCGTTCATCTGAGATCCTAAAGCTTCTTGTAAGCCAATTGGAGCCTTTGACCGAGCAGCAAGTAGCGGAAATCTGCAACCTGCAACAATTATCACAACAGGCAGAAGATGCTCTCTCACAAGGAATGGATGCATTGCAGCAATCCTTGGCTGAAACGTTGGCCAGTGGCACGCCTGCTACGTCGGGGTCATCAGGTAATGTGGCTAATTATATGGGTCAAATGGCCATGGCAATGGGAAAGCTTGGAACTCTTGATGGCTTCCTACGCCAGGCCGATAATCTTCGTCAACAAACACTTCAACAAATGCATCGCATATTGACAACCCGTCAATCGGCTCGTGCGCTTCTTGCAATAAACGACTACTTCTCCCGCCTTCGAGCTCTAAGCTCTCTCTGGCTTGCACGGCCACGAGAGTGA

Protein sequence

MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDALQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE

Homology

[Close]

BLAST of CmaCh06G000230 vs. Swiss-Prot
Match: TGA21_TOBAC (TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana tabacum GN=TGA21 PE=1 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 4.3e-69
Identity = 136/154 (88.31%), Postives = 147/154 (95.45%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCF+WIGGFR SE+LKLLV+QLEPLTEQQ+A I NLQQ S QAEDALSQGM+A
Sbjct: 300 MWKTPAERCFMWIGGFRPSELLKLLVNQLEPLTEQQLAGIYNLQQSSHQAEDALSQGMEA 359

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSLAETLA+G+PA  GSSG+VANYMGQMAMAMGKLGTL+GFLRQADNLRQQTLQQMHR
Sbjct: 360 LQQSLAETLANGSPAPEGSSGDVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHR 419

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           +LTTRQSARALLAIN+YFSRLRALSSLWLARPRE
Sbjct: 420 VLTTRQSARALLAINEYFSRLRALSSLWLARPRE 453

[Close]

BLAST of CmaCh06G000230 vs. Swiss-Prot
Match: HBP1C_WHEAT (Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 253.8 bits (647), Expect = 1.2e-66
Identity = 133/154 (86.36%), Postives = 143/154 (92.86%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCF+W+GGFRSSE+LKLL  QLEPLTEQQ+  ICNLQQ SQQAEDALSQGM+A
Sbjct: 323 MWKTPAERCFMWLGGFRSSELLKLLAGQLEPLTEQQLTGICNLQQSSQQAEDALSQGMEA 382

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSLAETLASG+   +GSSGNVA+YMGQMAMAMGKLGTL+ FLRQADNLR QTLQQM R
Sbjct: 383 LQQSLAETLASGSLGPAGSSGNVASYMGQMAMAMGKLGTLENFLRQADNLRLQTLQQMQR 442

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           ILTTRQSARALLAI+DYFSRLRALSSLWLARPRE
Sbjct: 443 ILTTRQSARALLAISDYFSRLRALSSLWLARPRE 476

[Close]

BLAST of CmaCh06G000230 vs. Swiss-Prot
Match: TGA2_ARATH (Transcription factor TGA2 OS=Arabidopsis thaliana GN=TGA2 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 6.0e-63
Identity = 128/154 (83.12%), Postives = 144/154 (93.51%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCFLW+GGFRSSE+LKLL +QLEP+TE+Q+  I NLQQ SQQAEDALSQGM++
Sbjct: 178 MWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQLMGINNLQQTSQQAEDALSQGMES 237

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSLA+TL+SGT  +S SSGNVA+YMGQMAMAMGKLGTL+GF+RQADNLR QTLQQM R
Sbjct: 238 LQQSLADTLSSGTLGSS-SSGNVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTLQQMIR 297

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           +LTTRQSARALLAI+DYFSRLRALSSLWLARPRE
Sbjct: 298 VLTTRQSARALLAIHDYFSRLRALSSLWLARPRE 330

[Close]

BLAST of CmaCh06G000230 vs. Swiss-Prot
Match: HBP1B_WHEAT (Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 6.0e-63
Identity = 129/155 (83.23%), Postives = 141/155 (90.97%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCFLW+GGFR SE+LKLL +QLEPLTEQQ++ ICNLQQ SQQAEDALSQGM+A
Sbjct: 178 MWKTPAERCFLWLGGFRPSELLKLLSTQLEPLTEQQLSGICNLQQSSQQAEDALSQGMEA 237

Query: 61  LQQSLAETLASGTPAT-SGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMH 120
           LQQSLAETLA    ++ SGS+GNVANYMGQMAMAMGKLGTL+ FL QADNLRQQTLQQM 
Sbjct: 238 LQQSLAETLAGSIGSSGSGSTGNVANYMGQMAMAMGKLGTLENFLSQADNLRQQTLQQMQ 297

Query: 121 RILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           RILTTRQSARALL I+DY SRLRALSSLWLARP+E
Sbjct: 298 RILTTRQSARALLVISDYSSRLRALSSLWLARPKE 332

[Close]

BLAST of CmaCh06G000230 vs. Swiss-Prot
Match: TGA5_ARATH (Transcription factor TGA5 OS=Arabidopsis thaliana GN=TGA5 PE=1 SV=2)

HSP 1 Score: 234.6 bits (597), Expect = 7.4e-61
Identity = 126/154 (81.82%), Postives = 140/154 (90.91%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCFLW+GGFRSSE+LKL+ SQLEPLTEQQ  +I NLQQ SQQAEDALSQGMD 
Sbjct: 178 MWKTPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSLDINNLQQSSQQAEDALSQGMDN 237

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSLA+TL+SGT  +S SSGNVA+YMGQMAMAMGKLGTL+GF+RQADNLR QT QQM R
Sbjct: 238 LQQSLADTLSSGTLGSS-SSGNVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTYQQMVR 297

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           +LTTRQSARALLA+++Y  RLRALSSLWLARPRE
Sbjct: 298 LLTTRQSARALLAVHNYTLRLRALSSLWLARPRE 330

[Close]

BLAST of CmaCh06G000230 vs. TrEMBL
Match: A0A0A0LEV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819960 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.2e-72
Identity = 147/154 (95.45%), Postives = 150/154 (97.40%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCFLWIGGFRSSEILKLLVSQLEPL EQQ+  ICNLQQLSQQAEDALSQGMDA
Sbjct: 315 MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLAEQQLMGICNLQQLSQQAEDALSQGMDA 374

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSLAETLAS TPATSGSSGNVANYMGQMAMAMGKLGTL+GFLRQADNLRQQTLQQMHR
Sbjct: 375 LQQSLAETLASATPATSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHR 434

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           ILTTRQSARALLAINDYFSRLRALSSLWLARPR+
Sbjct: 435 ILTTRQSARALLAINDYFSRLRALSSLWLARPRD 468

[Close]

BLAST of CmaCh06G000230 vs. TrEMBL
Match: W9QTW3_9ROSA (TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Morus notabilis GN=L484_003443 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.6e-70
Identity = 142/154 (92.21%), Postives = 149/154 (96.75%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCF+WIGGFRSSE+LKLLV+QLEPLTEQQ+  ICNLQQ SQQAEDALSQGM+A
Sbjct: 333 MWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGICNLQQSSQQAEDALSQGMEA 392

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSLAETLASG+P  SGSSGNVANYMGQMAMAMGKLGTL+GFLRQADNLRQQTLQQMHR
Sbjct: 393 LQQSLAETLASGSPGPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHR 452

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           ILTTRQSARALLAINDYFSRLRALSSLWLARPRE
Sbjct: 453 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 486

[Close]

BLAST of CmaCh06G000230 vs. TrEMBL
Match: D9ZIQ7_MALDO (BZIP domain class transcription factor OS=Malus domestica GN=BZIP19 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 3.6e-70
Identity = 143/154 (92.86%), Postives = 149/154 (96.75%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCF+WIGGFRSSE+LKLLVSQLEPLTEQQ+  I NLQQ SQQAEDALSQGM+A
Sbjct: 263 MWKTPAERCFMWIGGFRSSELLKLLVSQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMEA 322

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSL+ETLASG+PA SGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR
Sbjct: 323 LQQSLSETLASGSPAPSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 382

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           ILTTRQSARALLAINDYFSRLRALSSLWLARPRE
Sbjct: 383 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 416

[Close]

BLAST of CmaCh06G000230 vs. TrEMBL
Match: A0A067DPL5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015258mg PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.9e-69
Identity = 140/154 (90.91%), Postives = 149/154 (96.75%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCF+WIGGFRSSE+LKLLV+QLEPLTEQQ+  I NLQQ SQQAEDALSQGMDA
Sbjct: 205 MWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDA 264

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSLAETLA+G+P+ SG+SGNVANYMGQMAMAMGKLGTL+GFLRQADNLRQQTLQQMHR
Sbjct: 265 LQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHR 324

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           ILTTRQSARALLAINDYFSRLRALSSLWLARPRE
Sbjct: 325 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 358

[Close]

BLAST of CmaCh06G000230 vs. TrEMBL
Match: V4S682_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005080mg PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.9e-69
Identity = 140/154 (90.91%), Postives = 149/154 (96.75%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCF+WIGGFRSSE+LKLLV+QLEPLTEQQ+  I NLQQ SQQAEDALSQGMDA
Sbjct: 257 MWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMDA 316

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSLAETLA+G+P+ SG+SGNVANYMGQMAMAMGKLGTL+GFLRQADNLRQQTLQQMHR
Sbjct: 317 LQQSLAETLANGSPSPSGTSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHR 376

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           ILTTRQSARALLAINDYFSRLRALSSLWLARPRE
Sbjct: 377 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 410

[Close]

BLAST of CmaCh06G000230 vs. TAIR10
Match: AT5G06950.1 (AT5G06950.1 bZIP transcription factor family protein)

HSP 1 Score: 241.5 bits (615), Expect = 3.4e-64
Identity = 128/154 (83.12%), Postives = 144/154 (93.51%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCFLW+GGFRSSE+LKLL +QLEP+TE+Q+  I NLQQ SQQAEDALSQGM++
Sbjct: 178 MWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQLMGINNLQQTSQQAEDALSQGMES 237

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSLA+TL+SGT  +S SSGNVA+YMGQMAMAMGKLGTL+GF+RQADNLR QTLQQM R
Sbjct: 238 LQQSLADTLSSGTLGSS-SSGNVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTLQQMIR 297

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           +LTTRQSARALLAI+DYFSRLRALSSLWLARPRE
Sbjct: 298 VLTTRQSARALLAIHDYFSRLRALSSLWLARPRE 330

[Close]

BLAST of CmaCh06G000230 vs. TAIR10
Match: AT5G06960.1 (AT5G06960.1 OCS-element binding factor 5)

HSP 1 Score: 234.6 bits (597), Expect = 4.2e-62
Identity = 126/154 (81.82%), Postives = 140/154 (90.91%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCFLW+GGFRSSE+LKL+ SQLEPLTEQQ  +I NLQQ SQQAEDALSQGMD 
Sbjct: 178 MWKTPAERCFLWLGGFRSSELLKLIASQLEPLTEQQSLDINNLQQSSQQAEDALSQGMDN 237

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSLA+TL+SGT  +S SSGNVA+YMGQMAMAMGKLGTL+GF+RQADNLR QT QQM R
Sbjct: 238 LQQSLADTLSSGTLGSS-SSGNVASYMGQMAMAMGKLGTLEGFIRQADNLRLQTYQQMVR 297

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           +LTTRQSARALLA+++Y  RLRALSSLWLARPRE
Sbjct: 298 LLTTRQSARALLAVHNYTLRLRALSSLWLARPRE 330

[Close]

BLAST of CmaCh06G000230 vs. TAIR10
Match: AT3G12250.4 (AT3G12250.4 TGACG motif-binding factor 6)

HSP 1 Score: 233.4 bits (594), Expect = 9.3e-62
Identity = 125/154 (81.17%), Postives = 142/154 (92.21%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCFLW+GGFRSSE+LKLL +QLEP+TE+QV  I +LQQ SQQAEDALSQGM++
Sbjct: 203 MWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQVMGINSLQQTSQQAEDALSQGMES 262

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSLA+TL+SGT  +S SS NVA+YMGQMAMAMG+LGTL+GF+RQADNLR QTLQQM R
Sbjct: 263 LQQSLADTLSSGTLGSS-SSDNVASYMGQMAMAMGQLGTLEGFIRQADNLRLQTLQQMLR 322

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           +LTTRQSARALLAI+DY SRLRALSSLWLARPRE
Sbjct: 323 VLTTRQSARALLAIHDYSSRLRALSSLWLARPRE 355

[Close]

BLAST of CmaCh06G000230 vs. TAIR10
Match: AT1G68640.1 (AT1G68640.1 bZIP transcription factor family protein)

HSP 1 Score: 219.9 bits (559), Expect = 1.1e-57
Identity = 116/154 (75.32%), Postives = 135/154 (87.66%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAER F+W+GGFRSSE+LK+L + ++PLT+QQ+  ICNLQQ SQQAEDALSQGM+A
Sbjct: 300 MWKTPAERFFMWLGGFRSSELLKILGNHVDPLTDQQLIGICNLQQSSQQAEDALSQGMEA 359

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSL ETL+S +   + SS NVA+YMG MAMAMGKLGTL+ FLRQAD LRQQTLQQ+HR
Sbjct: 360 LQQSLLETLSSASMGPN-SSANVADYMGHMAMAMGKLGTLENFLRQADLLRQQTLQQLHR 419

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           ILTTRQ+ARA L I+DY SRLRALSSLWLARPR+
Sbjct: 420 ILTTRQAARAFLVIHDYISRLRALSSLWLARPRD 452

[Close]

BLAST of CmaCh06G000230 vs. TAIR10
Match: AT5G06839.3 (AT5G06839.3 bZIP transcription factor family protein)

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-47
Identity = 91/155 (58.71%), Postives = 129/155 (83.23%), Query Frame = 1


Query: 2   WKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDAL 61
           WKTPAERCFLW+GGFR SEI+K++V+Q+EPLTEQQ+  IC LQQ +Q+AE+ALSQG++AL
Sbjct: 304 WKTPAERCFLWMGGFRPSEIIKVIVNQIEPLTEQQIVGICGLQQSTQEAEEALSQGLEAL 363

Query: 62  QQSLAETLASGT--PATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMH 121
            QSL++++ S +  PA++    +++N+M  M++A+ KL  L+GF+ QADNLR QT+ +++
Sbjct: 364 NQSLSDSIVSDSLPPASAPLPPHLSNFMSHMSLALNKLSALEGFVLQADNLRHQTIHRLN 423

Query: 122 RILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           ++LTTRQ AR LLA+ +YF RL+ALSSLWLARPR+
Sbjct: 424 QLLTTRQEARCLLAVAEYFHRLQALSSLWLARPRQ 458

[Close]

BLAST of CmaCh06G000230 vs. NCBI nr
Match: gi|778685191|ref|XP_011652183.1| (PREDICTED: transcription factor HBP-1b(c38)-like [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 3.2e-72
Identity = 147/154 (95.45%), Postives = 150/154 (97.40%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCFLWIGGFRSSEILKLLVSQLEPL EQQ+  ICNLQQLSQQAEDALSQGMDA
Sbjct: 315 MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLAEQQLMGICNLQQLSQQAEDALSQGMDA 374

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSLAETLAS TPATSGSSGNVANYMGQMAMAMGKLGTL+GFLRQADNLRQQTLQQMHR
Sbjct: 375 LQQSLAETLASATPATSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHR 434

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           ILTTRQSARALLAINDYFSRLRALSSLWLARPR+
Sbjct: 435 ILTTRQSARALLAINDYFSRLRALSSLWLARPRD 468

[Close]

BLAST of CmaCh06G000230 vs. NCBI nr
Match: gi|659085119|ref|XP_008443255.1| (PREDICTED: transcription factor HBP-1b(c38)-like [Cucumis melo])

HSP 1 Score: 278.5 bits (711), Expect = 7.1e-72
Identity = 146/154 (94.81%), Postives = 150/154 (97.40%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCFLWIGGFRSSEILKLLV+QLEPL EQQ+  ICNLQQLSQQAEDALSQGMDA
Sbjct: 315 MWKTPAERCFLWIGGFRSSEILKLLVNQLEPLAEQQLMGICNLQQLSQQAEDALSQGMDA 374

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSLAETLAS TPATSGSSGNVANYMGQMAMAMGKLGTL+GFLRQADNLRQQTLQQMHR
Sbjct: 375 LQQSLAETLASATPATSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHR 434

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           ILTTRQSARALLAINDYFSRLRALSSLWLARPR+
Sbjct: 435 ILTTRQSARALLAINDYFSRLRALSSLWLARPRD 468

[Close]

BLAST of CmaCh06G000230 vs. NCBI nr
Match: gi|703088629|ref|XP_010093582.1| (TGACG-sequence-specific DNA-binding protein TGA-2.1 [Morus notabilis])

HSP 1 Score: 273.5 bits (698), Expect = 2.3e-70
Identity = 142/154 (92.21%), Postives = 149/154 (96.75%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCF+WIGGFRSSE+LKLLV+QLEPLTEQQ+  ICNLQQ SQQAEDALSQGM+A
Sbjct: 333 MWKTPAERCFMWIGGFRSSELLKLLVNQLEPLTEQQLVGICNLQQSSQQAEDALSQGMEA 392

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSLAETLASG+P  SGSSGNVANYMGQMAMAMGKLGTL+GFLRQADNLRQQTLQQMHR
Sbjct: 393 LQQSLAETLASGSPGPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHR 452

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           ILTTRQSARALLAINDYFSRLRALSSLWLARPRE
Sbjct: 453 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 486

[Close]

BLAST of CmaCh06G000230 vs. NCBI nr
Match: gi|302398631|gb|ADL36610.1| (BZIP domain class transcription factor [Malus domestica])

HSP 1 Score: 272.3 bits (695), Expect = 5.1e-70
Identity = 143/154 (92.86%), Postives = 149/154 (96.75%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCF+WIGGFRSSE+LKLLVSQLEPLTEQQ+  I NLQQ SQQAEDALSQGM+A
Sbjct: 263 MWKTPAERCFMWIGGFRSSELLKLLVSQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMEA 322

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSL+ETLASG+PA SGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR
Sbjct: 323 LQQSLSETLASGSPAPSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 382

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           ILTTRQSARALLAINDYFSRLRALSSLWLARPRE
Sbjct: 383 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 416

[Close]

BLAST of CmaCh06G000230 vs. NCBI nr
Match: gi|694420335|ref|XP_009338082.1| (PREDICTED: transcription factor HBP-1b(c38)-like [Pyrus x bretschneideri])

HSP 1 Score: 272.3 bits (695), Expect = 5.1e-70
Identity = 143/154 (92.86%), Postives = 149/154 (96.75%), Query Frame = 1


Query: 1   MWKTPAERCFLWIGGFRSSEILKLLVSQLEPLTEQQVAEICNLQQLSQQAEDALSQGMDA 60
           MWKTPAERCF+WIGGFRSSE+LKLLVSQLEPLTEQQ+  I NLQQ SQQAEDALSQGM+A
Sbjct: 299 MWKTPAERCFMWIGGFRSSELLKLLVSQLEPLTEQQLVGIYNLQQSSQQAEDALSQGMEA 358

Query: 61  LQQSLAETLASGTPATSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 120
           LQQSL+ETLASG+PA SGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR
Sbjct: 359 LQQSLSETLASGSPAPSGSSGNVANYMGQMAMAMGKLGTLDGFLRQADNLRQQTLQQMHR 418

Query: 121 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 155
           ILTTRQSARALLAINDYFSRLRALSSLWLARPRE
Sbjct: 419 ILTTRQSARALLAINDYFSRLRALSSLWLARPRE 452

The following BLAST results are available for this feature:

BLAST of CmaCh06G000230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TGA21_TOBAC	4.3e-69	88.31	TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Nicotiana tabacum GN=TGA2...	[more]
HBP1C_WHEAT	1.2e-66	86.36	Transcription factor HBP-1b(c1) (Fragment) OS=Triticum aestivum PE=1 SV=2	[more]
TGA2_ARATH	6.0e-63	83.12	Transcription factor TGA2 OS=Arabidopsis thaliana GN=TGA2 PE=1 SV=1	[more]
HBP1B_WHEAT	6.0e-63	83.23	Transcription factor HBP-1b(c38) OS=Triticum aestivum PE=2 SV=1	[more]
TGA5_ARATH	7.4e-61	81.82	Transcription factor TGA5 OS=Arabidopsis thaliana GN=TGA5 PE=1 SV=2	[more]

BLAST of CmaCh06G000230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEV0_CUCSA	2.2e-72	95.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G819960 PE=4 SV=1	[more]
W9QTW3_9ROSA	1.6e-70	92.21	TGACG-sequence-specific DNA-binding protein TGA-2.1 OS=Morus notabilis GN=L484_0...	[more]
D9ZIQ7_MALDO	3.6e-70	92.86	BZIP domain class transcription factor OS=Malus domestica GN=BZIP19 PE=2 SV=1	[more]
A0A067DPL5_CITSI	3.9e-69	90.91	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015258mg PE=4 SV=1	[more]
V4S682_9ROSI	3.9e-69	90.91	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005080mg PE=4 SV=1	[more]

BLAST of CmaCh06G000230 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06950.1	3.4e-64	83.12	bZIP transcription factor family protein	[more]
AT5G06960.1	4.2e-62	81.82	OCS-element binding factor 5	[more]
AT3G12250.4	9.3e-62	81.17	TGACG motif-binding factor 6	[more]
AT1G68640.1	1.1e-57	75.32	bZIP transcription factor family protein	[more]
AT5G06839.3	1.7e-47	58.71	bZIP transcription factor family protein	[more]

BLAST of CmaCh06G000230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778685191\|ref\|XP_011652183.1\|	3.2e-72	95.45	PREDICTED: transcription factor HBP-1b(c38)-like [Cucumis sativus]	[more]
gi\|659085119\|ref\|XP_008443255.1\|	7.1e-72	94.81	PREDICTED: transcription factor HBP-1b(c38)-like [Cucumis melo]	[more]
gi\|703088629\|ref\|XP_010093582.1\|	2.3e-70	92.21	TGACG-sequence-specific DNA-binding protein TGA-2.1 [Morus notabilis]	[more]
gi\|302398631\|gb\|ADL36610.1\|	5.1e-70	92.86	BZIP domain class transcription factor [Malus domestica]	[more]
gi\|694420335\|ref\|XP_009338082.1\|	5.1e-70	92.86	PREDICTED: transcription factor HBP-1b(c38)-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025422	TGA_domain

Vocabulary: **Biological Process**
Term	Definition
GO:0006351	transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0043565	sequence-specific DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G000230.1	CmaCh06G000230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025422	Transcription factor TGA like domain	PFAM	PF14144	DOG1	coord: 1..27 score: 7.6
None	No IPR available	PANTHER	PTHR22952	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	coord: 1..154 score: 7.6E
None	No IPR available	PANTHER	PTHR22952:SF206	TRANSCRIPTION FACTOR TGA2	coord: 1..154 score: 7.6E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh06G000230	Cucurbita pepo (Zucchini)	cmacpeB832
CmaCh06G000230	Cucurbita pepo (Zucchini)	cmacpeB846
CmaCh06G000230	Bottle gourd (USVL1VR-Ls)	cmalsiB751
CmaCh06G000230	Cucumber (Gy14) v2	cgybcmaB436
CmaCh06G000230	Cucumber (Gy14) v2	cgybcmaB439
CmaCh06G000230	Melon (DHL92) v3.6.1	cmamedB852
CmaCh06G000230	Melon (DHL92) v3.6.1	cmamedB858
CmaCh06G000230	Silver-seed gourd	carcmaB0216
CmaCh06G000230	Silver-seed gourd	carcmaB0349
CmaCh06G000230	Cucumber (Chinese Long) v3	cmacucB0972
CmaCh06G000230	Cucumber (Chinese Long) v3	cmacucB0976
CmaCh06G000230	Watermelon (97103) v2	cmawmbB838
CmaCh06G000230	Watermelon (97103) v2	cmawmbB848
CmaCh06G000230	Wax gourd	cmawgoB0981
CmaCh06G000230	Wax gourd	cmawgoB0987
CmaCh06G000230	Cucurbita maxima (Rimu)	cmacmaB286
CmaCh06G000230	Cucumber (Gy14) v1	cgycmaB0942
CmaCh06G000230	Cucumber (Gy14) v1	cgycmaB0943
CmaCh06G000230	Cucurbita moschata (Rifu)	cmacmoB798
CmaCh06G000230	Cucurbita moschata (Rifu)	cmacmoB829
CmaCh06G000230	Wild cucumber (PI 183967)	cmacpiB835
CmaCh06G000230	Wild cucumber (PI 183967)	cmacpiB839
CmaCh06G000230	Cucumber (Chinese Long) v2	cmacuB823
CmaCh06G000230	Cucumber (Chinese Long) v2	cmacuB826
CmaCh06G000230	Melon (DHL92) v3.5.1	cmameB752
CmaCh06G000230	Melon (DHL92) v3.5.1	cmameB758
CmaCh06G000230	Watermelon (Charleston Gray)	cmawcgB720
CmaCh06G000230	Watermelon (Charleston Gray)	cmawcgB731
CmaCh06G000230	Watermelon (97103) v1	cmawmB781
CmaCh06G000230	Watermelon (97103) v1	cmawmB792