CmaCh05G008970 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh05G008970
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Activator of 90 kDa heat shock protein ATPase like 1
Location	Cma_Chr05 : 6966013 .. 6968653 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAGCCGGAAGAGTCGCCACATTGGGCGAAGGAGCCAATTTTGGCAGGAAGGGCGACGGCAACTTGGTTGGCGAAGAGGCCAGTGCGGCACCCAGATTCCGAAGGTAAATCTCTGCAAAAGGTTGATGGACTTGTCGAGATTCCGTATATTTCTGAAGAGAACACGGATGAGGATTCTGAGATTAGGGTTTCTGAGAAGGATGAAAGGTTGATTGGGAAGAAAATGAGAGATACTATATTGGCCAAGGGAAAAACCGATTGGGTTGGAAAAGGTGAGGTTGTATGTACAGAGTATGACAAAAAGGTAATTTGGAGGTCAATAGGGTGGAGCTGAAGAGTAATCAATCTGCTCCACCTGCGGCAACAATGAAGATTGCCCCTGCGGCGTCAAAGCTAGCAGGGGTGGTGGAGAAGAAAATTAGAGAATTCAAAAGCCAGAAAAGAAAGAATCGGTGTTGTTAAACCCTCTAATACCATAAGAATGTTTGATTAATCCACCCCATCTAAATGGTAGGAAAGTTATCTTATTTATAATCAAATACATTATAAGGATATGAAAATAGTAATAAATGGAAATAACAATAAATAGAAAGATACTTAGAGTAATAAGACAAATATTAGATATTTGTTTTATAATAAAATATCAAATATAATATATATGATAAACGAATCTACCCCATTTCTAAGCATAAAAACGGCATCTTCCAACACTACTCTAATTTAAAGTAAAGTCCCCTTAGTTGTGTTTCCCGTCAATTTGGCATTTTCCCCTTAAGTCGCTCTATGAAACATTTACACCATGTACACCCTTAAACTCACGGCAACACCTATACCAATAGCCATTTAAGAAACAATAAACAATGTTTAATAAAGCATTTCAAAGTTTTGGTACTAGCATCTTGTTTTACACTACTAGCACAATGACAGTTTAATAAACAATAAACCATAAACCATGTCTAATAAAGCATCTCTTAACCCATCTGGAGCAATTCCTTCCCCAAATATCTCTCTTCAACACTTCCTATAAAACAAAAGAGATAGATTACTTGTATAGAGAAAAAGAAAAATAGGGATTTGCTCAACTTCAACTCGATGAAAGAGATAGAAAAGTTTATGGGTAAGTTAGATCTTCCTTCTCTCATATCTCGTTTCAATTATTTAGATTTTTGCTATCATTTTACTAGTTATAGAAAATCAGATTAAAATTGTGAAAAAGAAAAAATCCATTAAAATTGACAAAAGATTACTGTGAACTAAATAAGAAAAAAATAGAGGAAAACATGTAATAAAAAATGGGAGATATGAAATTCTTTCTTTTATTACCTATGTAATTTAAATTAATTCAAATTGGCAAAAGCAATGGTAAACCTAACAAAAGTAAAAGAGAGAGAGAAAGAGTGTTAGAGAGAAGGAAAATGGAAGTTAAAATAAAAATGGAAATACAAAGAGAAGGGAAAATGGGAGATATGGAATTGTGCCTTCTATTCTTGTGGTCAAAAAATAATTGTGAACCTAAAAAAAAGTATAGCACCCAAGAAAATGGGAAATTTGAGAAATCATTATTACGTGTAAGGAGAGAATATAATATTATAACAAACAATACATGGATGGAAGAATAAAATAAAATGAAATAATATTAACATATTTTTAATTTAAGTTTTACTATCAAAAACAATACCGAAACCATGAAAATGTGGAATTTTATTTTTACCAAGGCAATTAATTTTATGTTTAAATTAGGTGAAACCTCGATATAAGTGAGAATGGATTCGAAGAAGAAAGCAAGCAAGTTCGGAGTTAGATAGAAATTCGGCTAAAGCCAACTAATTAAGCGGTCTTACTATAGAATAGACTAAAATTGTATGAGTTACGATGATATATGAATTGTGTCGTCCAATGTCGTATGTTAGTATATGATGATGTATGAGTTGTATTGTATGATGTCGTATACTCGTATATGATGATGTATGAGTTATGCTGATGTACGAGTTATGATGATGTGTGAGTTATGATACTTGATGATGTGTGTAGTGTATATATATTTCGATGAATGACGTACTTGATATGCTTGATGCACTCTATGACAATATTATGAGTATGATGATTGTGTGACGTTTACCTTAATATGATGATGTTTTCCATATTGAGCATGCTATATGATGATGAATGTCATATTGCATCATGTCGTGAGATCGACATTGGACACGACCCTAAGAGCATGAAAATAATATTCTTATTAAATATCCACGAATATGTGTTACCTAGAATAACAAAGAGATGAGACTAGAGGGTTGTGTCGAAAGAGACATTACGATGGATTTAGAGGGACCTCATGCATATTATATGTTCATAAGCATATGGCTACTTCTCCTAAAGATGATAAGTGTGGATGCGCACAATGTGATGATGAGTGTGAAAGCACACAACATGATGATGAGTGCGAATGCACACAACATGATGATGAGTGCGAATATGCACCGCATGATGATGAGTTCGAATATGCACCGCATGATGATGAGTGCAAATATGCATATCATGATGATGAGTATGAATACGCACCGTATGATGATGGTGGTGATCATGAGGCGCATGACACTATGGGGTTCCGCTCACTTCCGGACCTCGCTACAAATTAG

mRNA sequence

ATGTTGAAGCCGGAAGAGTCGCCACATTGGGCGAAGGAGCCAATTTTGGCAGGAAGGGCGACGGCAACTTGGTTGGCGAAGAGGCCAGTGCGGCACCCAGATTCCGAAGGTAAATCTCTGCAAAAGGTTGATGGACTTGTCGAGATTCCGTATATTTCTGAAGAGAACACGGATGAGGATTCTGAGATTAGGGTTTCTGAGAAGGATGAAAGGTTGATTGGGAAGAAAATGAGAGATACTATATTGGCCAAGGGAAAAACCGATTGGGTTGGAAAAGATGATAAGTGTGGATGCGCACAATGTGATGATGAGTGTGAAAGCACACAACATGATGATGAGTGCGAATGCACACAACATGATGATGAGTGCGAATATGCACCGCATGATGATGAGTTCGAATATGCACCGCATGATGATGAGTGCAAATATGCATATCATGATGATGAGTATGAATACGCACCGTATGATGATGGTGGTGATCATGAGGCGCATGACACTATGGGGTTCCGCTCACTTCCGGACCTCGCTACAAATTAG

Coding sequence (CDS)

ATGTTGAAGCCGGAAGAGTCGCCACATTGGGCGAAGGAGCCAATTTTGGCAGGAAGGGCGACGGCAACTTGGTTGGCGAAGAGGCCAGTGCGGCACCCAGATTCCGAAGGTAAATCTCTGCAAAAGGTTGATGGACTTGTCGAGATTCCGTATATTTCTGAAGAGAACACGGATGAGGATTCTGAGATTAGGGTTTCTGAGAAGGATGAAAGGTTGATTGGGAAGAAAATGAGAGATACTATATTGGCCAAGGGAAAAACCGATTGGGTTGGAAAAGATGATAAGTGTGGATGCGCACAATGTGATGATGAGTGTGAAAGCACACAACATGATGATGAGTGCGAATGCACACAACATGATGATGAGTGCGAATATGCACCGCATGATGATGAGTTCGAATATGCACCGCATGATGATGAGTGCAAATATGCATATCATGATGATGAGTATGAATACGCACCGTATGATGATGGTGGTGATCATGAGGCGCATGACACTATGGGGTTCCGCTCACTTCCGGACCTCGCTACAAATTAG

Protein sequence

MLKPEESPHWAKEPILAGRATATWLAKRPVRHPDSEGKSLQKVDGLVEIPYISEENTDEDSEIRVSEKDERLIGKKMRDTILAKGKTDWVGKDDKCGCAQCDDECESTQHDDECECTQHDDECEYAPHDDEFEYAPHDDECKYAYHDDEYEYAPYDDGGDHEAHDTMGFRSLPDLATN

Homology

[Close]

BLAST of CmaCh05G008970 vs. TrEMBL
Match: A0A0A0LGX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G800690 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-11
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 1


Query: 34  DSEGKSLQKVDGLVEIPYISEENTDEDSEIRVSEKDERLIGKKMRDTILAKGK 87
           DS G++LQKVDGLVEIPYIS+EN DED E+RVS KDE   GK+M+D +LAKGK
Sbjct: 97  DSAGEALQKVDGLVEIPYISDENADEDPEVRVSVKDEGPFGKRMKDAMLAKGK 149

[Close]

BLAST of CmaCh05G008970 vs. TrEMBL
Match: B9HA08_POPTR (Aha1 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0006s20890g PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.8e-10
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 1


Query: 34  DSEGKSLQKVDGLVEIPYISEENTDEDSEIRVSEKDERLIGKKMRDTILAKGK 87
           DSEG SL KVDG VEIPYIS+EN DED EIRV+ KDE  IGK ++D + AKGK
Sbjct: 97  DSEGNSLLKVDGSVEIPYISDENADEDPEIRVTVKDESPIGKTLKDAMFAKGK 149

[Close]

BLAST of CmaCh05G008970 vs. TrEMBL
Match: A0A164Y017_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_017036 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.7e-10
Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 1


Query: 34  DSEGKSLQKVDGLVEIPYISEENTDEDSEIRVSEKDERLIGKKMRDTILAKGK 87
           DS+GKSL  VDG+VE+PYIS+EN DED EIRV  KDE  IGK+++D  LAKGK
Sbjct: 97  DSDGKSLLVVDGVVEVPYISDENADEDPEIRVVVKDEGPIGKRLKDAFLAKGK 149

[Close]

BLAST of CmaCh05G008970 vs. TrEMBL
Match: M5VUM7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007854mg PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.7e-10
Identity = 33/53 (62.26%), Postives = 46/53 (86.79%), Query Frame = 1


Query: 34  DSEGKSLQKVDGLVEIPYISEENTDEDSEIRVSEKDERLIGKKMRDTILAKGK 87
           D++GKSL KVDG+VEIPYI++EN DED E+++S KDE  IGK++++ +LAKGK
Sbjct: 97  DADGKSLLKVDGVVEIPYIADENADEDPEVKISVKDEGPIGKRLKEAMLAKGK 149

[Close]

BLAST of CmaCh05G008970 vs. TrEMBL
Match: B9IIB3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s06010g PE=4 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 8.2e-10
Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 1


Query: 34  DSEGKSLQKVDGLVEIPYISEENTDEDSEIRVSEKDERLIGKKMRDTILAKGK 87
           DSEG SL KVDG VEIPYIS+EN DED EIRV+ KDE  IGK ++D + +KGK
Sbjct: 162 DSEGNSLLKVDGSVEIPYISDENADEDPEIRVTVKDEGPIGKTLKDAMFSKGK 214

[Close]

BLAST of CmaCh05G008970 vs. TAIR10
Match: AT3G12050.1 (AT3G12050.1 Aha1 domain-containing protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.3e-11
Identity = 31/53 (58.49%), Postives = 42/53 (79.25%), Query Frame = 1


Query: 34  DSEGKSLQKVDGLVEIPYISEENTDEDSEIRVSEKDERLIGKKMRDTILAKGK 87
           DS+GK+L K DGLV++PYIS+EN DED EIR S KDE  IG+ +++ ++ KGK
Sbjct: 97  DSDGKTLLKADGLVDMPYISDENADEDPEIRFSVKDEGPIGRTLKEAMVKKGK 149

[Close]

BLAST of CmaCh05G008970 vs. NCBI nr
Match: gi|659084712|ref|XP_008443031.1| (PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Cucumis melo])

HSP 1 Score: 79.3 bits (194), Expect = 7.3e-12
Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 1


Query: 34  DSEGKSLQKVDGLVEIPYISEENTDEDSEIRVSEKDERLIGKKMRDTILAKGK 87
           DS G+SLQKVDGLVEIPYIS+EN DED E+RVS KDE   GK+M+D +LAKGK
Sbjct: 97  DSAGESLQKVDGLVEIPYISDENADEDPEVRVSVKDEGPFGKRMKDAMLAKGK 149

[Close]

BLAST of CmaCh05G008970 vs. NCBI nr
Match: gi|449437565|ref|XP_004136562.1| (PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 1.6e-11
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 1


Query: 34  DSEGKSLQKVDGLVEIPYISEENTDEDSEIRVSEKDERLIGKKMRDTILAKGK 87
           DS G++LQKVDGLVEIPYIS+EN DED E+RVS KDE   GK+M+D +LAKGK
Sbjct: 97  DSAGEALQKVDGLVEIPYISDENADEDPEVRVSVKDEGPFGKRMKDAMLAKGK 149

[Close]

BLAST of CmaCh05G008970 vs. NCBI nr
Match: gi|502122752|ref|XP_004497884.1| (PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1-like [Cicer arietinum])

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-10
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 1


Query: 34  DSEGKSLQKVDGLVEIPYISEENTDEDSEIRVSEKDERLIGKKMRDTILAKGK 87
           DS+GK L KV G VEIPYIS+EN DED E+RVS KDE  IGK  RD +LAKGK
Sbjct: 97  DSDGKLLHKVTGTVEIPYISDENADEDPEVRVSVKDEGKIGKNFRDAVLAKGK 149

[Close]

BLAST of CmaCh05G008970 vs. NCBI nr
Match: gi|224091595|ref|XP_002309294.1| (aha1 domain-containing family protein [Populus trichocarpa])

HSP 1 Score: 73.6 bits (179), Expect = 4.0e-10
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 1


Query: 34  DSEGKSLQKVDGLVEIPYISEENTDEDSEIRVSEKDERLIGKKMRDTILAKGK 87
           DSEG SL KVDG VEIPYIS+EN DED EIRV+ KDE  IGK ++D + AKGK
Sbjct: 97  DSEGNSLLKVDGSVEIPYISDENADEDPEIRVTVKDESPIGKTLKDAMFAKGK 149

[Close]

BLAST of CmaCh05G008970 vs. NCBI nr
Match: gi|1021036008|gb|KZM93791.1| (hypothetical protein DCAR_017036 [Daucus carota subsp. sativus])

HSP 1 Score: 73.2 bits (178), Expect = 5.3e-10
Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 1


Query: 34  DSEGKSLQKVDGLVEIPYISEENTDEDSEIRVSEKDERLIGKKMRDTILAKGK 87
           DS+GKSL  VDG+VE+PYIS+EN DED EIRV  KDE  IGK+++D  LAKGK
Sbjct: 97  DSDGKSLLVVDGVVEVPYISDENADEDPEIRVVVKDEGPIGKRLKDAFLAKGK 149

The following BLAST results are available for this feature:

BLAST of CmaCh05G008970 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh05G008970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGX2_CUCSA	1.1e-11	71.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G800690 PE=4 SV=1	[more]
B9HA08_POPTR	2.8e-10	69.81	Aha1 domain-containing family protein OS=Populus trichocarpa GN=POPTR_0006s20890...	[more]
A0A164Y017_DAUCA	3.7e-10	67.92	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_017036 PE=4 SV=1	[more]
M5VUM7_PRUPE	3.7e-10	62.26	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007854mg PE=4 SV=1	[more]
B9IIB3_POPTR	8.2e-10	67.92	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s06010g PE=4 SV=2	[more]

BLAST of CmaCh05G008970 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12050.1	2.3e-11	58.49	Aha1 domain-containing protein	[more]

BLAST of CmaCh05G008970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659084712\|ref\|XP_008443031.1\|	7.3e-12	73.58	PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Cucumis melo...	[more]
gi\|449437565\|ref\|XP_004136562.1\|	1.6e-11	71.70	PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1 [Cucumis sati...	[more]
gi\|502122752\|ref\|XP_004497884.1\|	2.4e-10	69.81	PREDICTED: activator of 90 kDa heat shock protein ATPase homolog 1-like [Cicer a...	[more]
gi\|224091595\|ref\|XP_002309294.1\|	4.0e-10	69.81	aha1 domain-containing family protein [Populus trichocarpa]	[more]
gi\|1021036008\|gb\|KZM93791.1\|	5.3e-10	67.92	hypothetical protein DCAR_017036 [Daucus carota subsp. sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR015310	AHSA1_N

Vocabulary: **Molecular Function**
Term	Definition
GO:0001671	ATPase activator activity
GO:0051087	chaperone binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032781	positive regulation of ATPase activity
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006950	response to stress
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0001671	ATPase activator activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G008970.1	CmaCh05G008970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015310	Activator of Hsp90 ATPase, N-terminal	PFAM	PF09229	Aha1_N	coord: 24..86 score: 8.
None	No IPR available	PANTHER	PTHR13009	HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1	coord: 34..86 score: 9.5
None	No IPR available	PANTHER	PTHR13009:SF8	AHSA1 PROTEIN	coord: 34..86 score: 9.5

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh05G008970	Silver-seed gourd	carcmaB0445
CmaCh05G008970	Cucumber (Chinese Long) v3	cmacucB0949
CmaCh05G008970	Cucumber (Chinese Long) v3	cmacucB0947
CmaCh05G008970	Watermelon (97103) v2	cmawmbB833
CmaCh05G008970	Wax gourd	cmawgoB0931
CmaCh05G008970	Cucurbita maxima (Rimu)	cmacmaB197
CmaCh05G008970	Cucumber (Gy14) v1	cgycmaB0016
CmaCh05G008970	Cucurbita moschata (Rifu)	cmacmoB771
CmaCh05G008970	Cucurbita moschata (Rifu)	cmacmoB787
CmaCh05G008970	Wild cucumber (PI 183967)	cmacpiB813
CmaCh05G008970	Wild cucumber (PI 183967)	cmacpiB815
CmaCh05G008970	Cucumber (Chinese Long) v2	cmacuB802
CmaCh05G008970	Cucumber (Chinese Long) v2	cmacuB804
CmaCh05G008970	Melon (DHL92) v3.5.1	cmameB715
CmaCh05G008970	Melon (DHL92) v3.5.1	cmameB716
CmaCh05G008970	Watermelon (Charleston Gray)	cmawcgB685
CmaCh05G008970	Watermelon (97103) v1	cmawmB749
CmaCh05G008970	Cucurbita pepo (Zucchini)	cmacpeB761
CmaCh05G008970	Cucurbita pepo (Zucchini)	cmacpeB800
CmaCh05G008970	Bottle gourd (USVL1VR-Ls)	cmalsiB722
CmaCh05G008970	Cucumber (Gy14) v2	cgybcmaB693
CmaCh05G008970	Melon (DHL92) v3.6.1	cmamedB806
CmaCh05G008970	Melon (DHL92) v3.6.1	cmamedB805