CmaCh05G006690 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh05G006690
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionXyloglucan endotransglucosylase/hydrolase
LocationCma_Chr05 : 3439036 .. 3440571 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGAAGCGTCGCCGCCGTTGTGTTTGGTGGTTTTGGTTGTTTGTCTGTTGGGGTTTTCCGGCGCCGTCGATATGAACGGGGAGTTGGAGATCACGTGGGGTGGCGACCGAGCCAAGTTTCTGGACGGCGGAAATGAGCTGACGCTGTCGCTTGACAAAGGCTCCGGCTCCGGCTTCTGGTCGAGGAACCAATATGTGTTTGCCAAAATCGACATGCAGATTAAGCTCGTCCCCGGAAACTCCGCCGGCACGGTGACGGCGTATTACGTAAGCTCTCTAATTCCGTGATTTTCCTTTAATAAAATTAAAGCACGTAACTCTTCACTCCATTACATTGAATTAAACATTTATTTATAAATTAAACATTTGTTGAAATTGTTTTTATTTAAATTTTTGTTTTTGATAAAAGTAAAATGTTTAATTTATAAATTATTTATTTATTAACCTTTAATTATAAATTTTAGTTCAGTGTACAAATAAAATAAAATTAAAAAAATGTATATATAATTATATTGGAAGTAAATATATATTTATTTAAACCCATTATATTTTCAAAATTTGTATTTAACTTTCGTTCATTTATTAGTAATTGTACTTTAAGGATCCAAAGTCTATTTCATAAAATGTATTAAAAGAATATAATTAAAAATTCAAATCATCTTCTTTTAATTAAAGTTTATATTTTTAGTTATGAGTTTTATGATATGATATTTTACCTATAATAATTTACATTAATTATTTTTTAAAAAAATCACCGGTAAAGTCAAAAGTCATTAATTAGGCTATTAAAGCAGATTTAAGGTACAAAGTCATTTTAATGAAAAATAAAAAATAAAAAAAGACTTAGTACATTGAATTTAAATATTACCTAATACAAGATTAGGTAATTAGTGTGATAAAGTCGAGCAGAGCTAAGGTTATTTAAAGTTTTTCATGAAAGATAAGTATATTCACTGAATTTATCTTCAACGGTTATTATAAGACAATCACATGTTTAACTTTGAATGGTAATACGAATTGCAGTTACGTTCAAAAGAATCAAAGTGGGATGAGATAGACTTCGAGTTCTTGGGAAACCTTAGTTGTGAACCATATATTGTTCATACAAACATCTTCGTTCAAGGCAAAGGTGATAGAGAGCAACAATTCTACCTTTGGTTTGATCCAACTGCTGATTTTCACACTTATTCCTTTCTATGGAATCCCAAAAATATCATGTAAGTTAACAACTCTTCTCTCATCTATATATTTCCATATAGATTGGAGAGATAAACAAGTGCCAACAAGGACATTGGGCTTCGGAAAGGGTAGATGGTAAGATCTCACATCGGTTGGAGAGTAGAACTAAACATTATTTAGAAGGGTGTGGAAACCTCTCTTAGTAGACGTGTTTTAAAAACTTTGAAGTGGAGCAAATTCAAAGAAGATAATATCTACTAGCAATAGGTGGAATTGGACTGTTACCAACGTGAAGACGGGGTAGGAGGTAAGAAAAGTTTGACACTTTATTAATGGTTATAAATTGTTGGCAGA

mRNA sequence

ATGGCTGAAGCGTCGCCGCCGTTGTGTTTGGTGGTTTTGGTTGTTTGTCTGTTGGGGTTTTCCGGCGCCGTCGATATGAACGGGGAGTTGGAGATCACGTGGGGTGGCGACCGAGCCAAGTTTCTGGACGGCGGAAATGAGCTGACGCTGTCGCTTGACAAAGGCTCCGGCTCCGGCTTCTGGTCGAGGAACCAATATGTGTTTGCCAAAATCGACATGCAGATTAAGCTCGTCCCCGGAAACTCCGCCGGCACGGTGACGGCGTATTACTTACGTTCAAAAGAATCAAAGTGGGATGAGATAGACTTCGAGTTCTTGGGAAACCTTAGTTGTGAACCATATATTGTTCATACAAACATCTTCGTTCAAGGCAAAGGTGATAGAGAGCAACAATTCTACCTTTGA

Coding sequence (CDS)

ATGGCTGAAGCGTCGCCGCCGTTGTGTTTGGTGGTTTTGGTTGTTTGTCTGTTGGGGTTTTCCGGCGCCGTCGATATGAACGGGGAGTTGGAGATCACGTGGGGTGGCGACCGAGCCAAGTTTCTGGACGGCGGAAATGAGCTGACGCTGTCGCTTGACAAAGGCTCCGGCTCCGGCTTCTGGTCGAGGAACCAATATGTGTTTGCCAAAATCGACATGCAGATTAAGCTCGTCCCCGGAAACTCCGCCGGCACGGTGACGGCGTATTACTTACGTTCAAAAGAATCAAAGTGGGATGAGATAGACTTCGAGTTCTTGGGAAACCTTAGTTGTGAACCATATATTGTTCATACAAACATCTTCGTTCAAGGCAAAGGTGATAGAGAGCAACAATTCTACCTTTGA

Protein sequence

MAEASPPLCLVVLVVCLLGFSGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSRNQYVFAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQGKGDREQQFYL
Homology
[Close]
BLAST of CmaCh05G006690 vs. Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-40
Identity = 82/134 (61.19%), Postives = 99/134 (73.88%), Query Frame = 1 

Query: 1   MAEASPPLCLVVLVVCLLGFSGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGF 60
           MA  S    +V L+   +  S + +   ++EITWG  R +  + G+ LTLSLDK SGSGF
Sbjct: 1   MAMISYSTIVVALLASFMICSVSANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGF 60

Query: 61  WSRNQYVFAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNI 120
            S+N+Y+F KIDMQIKLV GNSAGTVTAYYL+S  S WDEIDFEFLGNLS +PY +HTN+
Sbjct: 61  QSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNV 120

Query: 121 FVQGKGDREQQFYL 135
           F QGKGDREQQF L
Sbjct: 121 FTQGKGDREQQFKL 134

[Close]
BLAST of CmaCh05G006690 vs. Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-40
Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 1 

Query: 23  AVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSRNQYVFAKIDMQIKLVPGNS 82
           A D N ++ + WG  R K L+ G  LTLSLDK SGSGF S+ +Y+F KIDMQIKLVPGNS
Sbjct: 21  AADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNS 80

Query: 83  AGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQGKGDREQQFYL 135
           AGTVT +YL+S+ S WDEIDFEFLGN+S +PY +HTN++ QGKGD+EQQF+L
Sbjct: 81  AGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHL 132

[Close]
BLAST of CmaCh05G006690 vs. Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-40
Identity = 76/115 (66.09%), Postives = 92/115 (80.00%), Query Frame = 1 

Query: 20  FSGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSRNQYVFAKIDMQIKLVP 79
           F+G  D   E +ITWG  R K L+ G  LTLSLD+ SGSGF ++ +Y+F KIDMQ+KLVP
Sbjct: 26  FAGTFDT--EFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVP 85

Query: 80  GNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQGKGDREQQFYL 135
           GNSAGTVTAYYL+SK   WDEIDFEFLGNL+ +PY +HTN++ QGKGDREQQF+L
Sbjct: 86  GNSAGTVTAYYLKSKGDTWDEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHL 138

[Close]
BLAST of CmaCh05G006690 vs. Swiss-Prot
Match: XTH2_SOYBN (Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.4e-39
Identity = 81/127 (63.78%), Postives = 98/127 (77.17%), Query Frame = 1 

Query: 8   LCLVVLVVCLLGFSGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSRNQYV 67
           L LV +VV  +  + A     + ++TWGGDRAK  +GG  L+LSLDK SGSGF S+ +Y+
Sbjct: 14  LMLVGIVVSTMVATCAGSFYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYL 73

Query: 68  FAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQGKGD 127
           F +IDMQ+KLV GNSAGTVTAYYL S+    DEIDFEFLGNLS +PYI+HTNIF QGKG+
Sbjct: 74  FGRIDMQLKLVAGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNIFTQGKGN 133

Query: 128 REQQFYL 135
           REQQFYL
Sbjct: 134 REQQFYL 140

[Close]
BLAST of CmaCh05G006690 vs. Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 9.0e-39
Identity = 76/130 (58.46%), Postives = 96/130 (73.85%), Query Frame = 1 

Query: 10  LVVLVVCLLGFSGAV-----DMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSRN 69
           LV+ +   LG S  +     D N +++ITWG  R   L+ G  L L LD+ SGSGF S+ 
Sbjct: 7   LVMSISLFLGLSILLVVHGKDFNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKA 66

Query: 70  QYVFAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQG 129
           +Y++ K+DMQIKLVPGNSAGTVT +YL+S+   WDEIDFEFLGN+S +PYIVHTN++ QG
Sbjct: 67  EYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGLTWDEIDFEFLGNVSGDPYIVHTNVYTQG 126

Query: 130 KGDREQQFYL 135
           KGDREQQFYL
Sbjct: 127 KGDREQQFYL 136

[Close]
BLAST of CmaCh05G006690 vs. TrEMBL
Match: A0A0A0LGP8_CUCSA (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=Csa_2G049350 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.1e-54
Identity = 106/128 (82.81%), Postives = 113/128 (88.28%), Query Frame = 1 

Query: 7   PLCLVVLVVCLLGFSGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSRNQY 66
           PL  VVL+VCLLGF  A D+N +LEITWGGDRAK LD GN LTLSLDKGSGSGF SRNQY
Sbjct: 6   PLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQSRNQY 65

Query: 67  VFAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQGKG 126
           +F KI+MQIKLV GNSAGTVTAYYLRS ES+WDEIDFEFLGNLS +PYIVHTNIF QGKG
Sbjct: 66  LFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIFTQGKG 125

Query: 127 DREQQFYL 135
           DREQQFYL
Sbjct: 126 DREQQFYL 133

[Close]
BLAST of CmaCh05G006690 vs. TrEMBL
Match: N0DX45_CUCSA (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth7 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.1e-54
Identity = 106/128 (82.81%), Postives = 113/128 (88.28%), Query Frame = 1 

Query: 7   PLCLVVLVVCLLGFSGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSRNQY 66
           PL  VVL+VCLLGF  A D+N +LEITWGGDRAK LD GN LTLSLDKGSGSGF SRNQY
Sbjct: 6   PLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQSRNQY 65

Query: 67  VFAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQGKG 126
           +F KI+MQIKLV GNSAGTVTAYYLRS ES+WDEIDFEFLGNLS +PYIVHTNIF QGKG
Sbjct: 66  LFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIFTQGKG 125

Query: 127 DREQQFYL 135
           DREQQFYL
Sbjct: 126 DREQQFYL 133

[Close]
BLAST of CmaCh05G006690 vs. TrEMBL
Match: C0IRI1_MALDO (Xyloglucan endotransglucosylase/hydrolase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.5e-43
Identity = 89/135 (65.93%), Postives = 106/135 (78.52%), Query Frame = 1 

Query: 4   ASPPLCLVVLVVCLLGF----SGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSG 63
           AS    L++L + LL F    + A D+N + +ITWG  RAK L+ G  LTLSLDK SGSG
Sbjct: 2   ASYTTTLILLPIFLLSFVVAPASAADLNQDFDITWGDGRAKILNNGELLTLSLDKASGSG 61

Query: 64  FWSRNQYVFAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTN 123
           F S+++Y+F KIDMQ+KLVPGNSAGTVTAYYL SK S WDEIDFEFLGNLS +PYI+HTN
Sbjct: 62  FQSKHEYLFGKIDMQLKLVPGNSAGTVTAYYLSSKGSTWDEIDFEFLGNLSGDPYILHTN 121

Query: 124 IFVQGKGDREQQFYL 135
           +F QGKG+REQQFYL
Sbjct: 122 VFSQGKGNREQQFYL 136

[Close]
BLAST of CmaCh05G006690 vs. TrEMBL
Match: A0A0L9TF38_PHAAN (Xyloglucan endotransglucosylase/hydrolase OS=Phaseolus angularis GN=LR48_Vigan627s007000 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 7.2e-43
Identity = 88/131 (67.18%), Postives = 104/131 (79.39%), Query Frame = 1 

Query: 5   SPPLCLV-VLVVCLLGFSGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSR 64
           SP L L+ +L+      S A + N + +ITWG  RAK L+  N LTLSLD+ SGSGF S+
Sbjct: 6   SPSLPLLPILLSAYFLLSAAANFNQDFQITWGDGRAKILNNANLLTLSLDRASGSGFQSK 65

Query: 65  NQYVFAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQ 124
           N+Y+F KIDMQ+KLVPGNSAGTVTAYYLRS+ S WDEIDFEFLGNLS +PYIVHTN+F Q
Sbjct: 66  NEYLFGKIDMQLKLVPGNSAGTVTAYYLRSEGSSWDEIDFEFLGNLSGDPYIVHTNVFTQ 125

Query: 125 GKGDREQQFYL 135
           GKG+REQQFYL
Sbjct: 126 GKGNREQQFYL 136

[Close]
BLAST of CmaCh05G006690 vs. TrEMBL
Match: A0A0S3R7U0_PHAAN (Xyloglucan endotransglucosylase/hydrolase OS=Vigna angularis var. angularis GN=Vigan.01G476000 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 7.2e-43
Identity = 88/131 (67.18%), Postives = 104/131 (79.39%), Query Frame = 1 

Query: 5   SPPLCLV-VLVVCLLGFSGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSR 64
           SP L L+ +L+      S A + N + +ITWG  RAK L+  N LTLSLD+ SGSGF S+
Sbjct: 6   SPSLPLLPILLSAYFLLSAAANFNQDFQITWGDGRAKILNNANLLTLSLDRASGSGFQSK 65

Query: 65  NQYVFAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQ 124
           N+Y+F KIDMQ+KLVPGNSAGTVTAYYLRS+ S WDEIDFEFLGNLS +PYIVHTN+F Q
Sbjct: 66  NEYLFGKIDMQLKLVPGNSAGTVTAYYLRSEGSSWDEIDFEFLGNLSGDPYIVHTNVFTQ 125

Query: 125 GKGDREQQFYL 135
           GKG+REQQFYL
Sbjct: 126 GKGNREQQFYL 136

[Close]
BLAST of CmaCh05G006690 vs. TAIR10
Match: AT4G25810.1 (AT4G25810.1 xyloglucan endotransglycosylase 6)

HSP 1 Score: 167.2 bits (422), Expect = 7.1e-42
Identity = 82/134 (61.19%), Postives = 99/134 (73.88%), Query Frame = 1 

Query: 1   MAEASPPLCLVVLVVCLLGFSGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGF 60
           MA  S    +V L+   +  S + +   ++EITWG  R +  + G+ LTLSLDK SGSGF
Sbjct: 1   MAMISYSTIVVALLASFMICSVSANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGF 60

Query: 61  WSRNQYVFAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNI 120
            S+N+Y+F KIDMQIKLV GNSAGTVTAYYL+S  S WDEIDFEFLGNLS +PY +HTN+
Sbjct: 61  QSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNV 120

Query: 121 FVQGKGDREQQFYL 135
           F QGKGDREQQF L
Sbjct: 121 FTQGKGDREQQFKL 134

[Close]
BLAST of CmaCh05G006690 vs. TAIR10
Match: AT4G30270.1 (AT4G30270.1 xyloglucan endotransglucosylase/hydrolase 24)

HSP 1 Score: 166.8 bits (421), Expect = 9.3e-42
Identity = 73/112 (65.18%), Postives = 90/112 (80.36%), Query Frame = 1 

Query: 23  AVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSRNQYVFAKIDMQIKLVPGNS 82
           A D N ++ + WG  R K L+ G  LTLSLDK SGSGF S+ +Y+F KIDMQIKLVPGNS
Sbjct: 21  AADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNS 80

Query: 83  AGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQGKGDREQQFYL 135
           AGTVT +YL+S+ S WDEIDFEFLGN+S +PY +HTN++ QGKGD+EQQF+L
Sbjct: 81  AGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHL 132

[Close]
BLAST of CmaCh05G006690 vs. TAIR10
Match: AT5G57550.1 (AT5G57550.1 xyloglucan endotransglucosylase/hydrolase 25)

HSP 1 Score: 166.8 bits (421), Expect = 9.3e-42
Identity = 76/115 (66.09%), Postives = 92/115 (80.00%), Query Frame = 1 

Query: 20  FSGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSRNQYVFAKIDMQIKLVP 79
           F+G  D   E +ITWG  R K L+ G  LTLSLD+ SGSGF ++ +Y+F KIDMQ+KLVP
Sbjct: 26  FAGTFDT--EFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVP 85

Query: 80  GNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQGKGDREQQFYL 135
           GNSAGTVTAYYL+SK   WDEIDFEFLGNL+ +PY +HTN++ QGKGDREQQF+L
Sbjct: 86  GNSAGTVTAYYLKSKGDTWDEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHL 138

[Close]
BLAST of CmaCh05G006690 vs. TAIR10
Match: AT4G14130.1 (AT4G14130.1 xyloglucan endotransglucosylase/hydrolase 15)

HSP 1 Score: 161.0 bits (406), Expect = 5.1e-40
Identity = 76/123 (61.79%), Postives = 96/123 (78.05%), Query Frame = 1 

Query: 12  VLVVCLLGFSGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSRNQYVFAKI 71
           VL+V L G + A +   E ++TWG  R K  +GGN L+LSLD+ SGSGF S+ +Y+F +I
Sbjct: 14  VLLVTLFGSAYASNFFDEFDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRI 73

Query: 72  DMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQGKGDREQQ 131
           DMQ+KLV GNSAGTVTAYYL S+ +  DEIDFEFLGN + +PY++HTN+F QGKGDREQQ
Sbjct: 74  DMQLKLVAGNSAGTVTAYYLSSQGATHDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQ 133

Query: 132 FYL 135
           FYL
Sbjct: 134 FYL 136

[Close]
BLAST of CmaCh05G006690 vs. TAIR10
Match: AT2G18800.1 (AT2G18800.1 xyloglucan endotransglucosylase/hydrolase 21)

HSP 1 Score: 161.0 bits (406), Expect = 5.1e-40
Identity = 76/130 (58.46%), Postives = 96/130 (73.85%), Query Frame = 1 

Query: 10  LVVLVVCLLGFSGAV-----DMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSRN 69
           LV+ +   LG S  +     D N +++ITWG  R   L+ G  L L LD+ SGSGF S+ 
Sbjct: 7   LVMSISLFLGLSILLVVHGKDFNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKA 66

Query: 70  QYVFAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQG 129
           +Y++ K+DMQIKLVPGNSAGTVT +YL+S+   WDEIDFEFLGN+S +PYIVHTN++ QG
Sbjct: 67  EYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGLTWDEIDFEFLGNVSGDPYIVHTNVYTQG 126

Query: 130 KGDREQQFYL 135
           KGDREQQFYL
Sbjct: 127 KGDREQQFYL 136

[Close]
BLAST of CmaCh05G006690 vs. NCBI nr
Match: gi|659069885|ref|XP_008452257.1| (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucumis melo])

HSP 1 Score: 224.9 bits (572), Expect = 8.1e-56
Identity = 108/131 (82.44%), Postives = 117/131 (89.31%), Query Frame = 1 

Query: 4   ASPPLCLVVLVVCLLGFSGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSR 63
           A+PPL  VVL+VCL+GF+ A D+N +LEITWGGDRAK L+ GN LTLSLDKGSGSGF SR
Sbjct: 3   AAPPLYSVVLLVCLMGFASAGDLNKDLEITWGGDRAKLLNAGNTLTLSLDKGSGSGFRSR 62

Query: 64  NQYVFAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQ 123
           NQY+F KI+MQIKLVPGNSAGTV AYYLRS ESKWDEIDFEFLGNLS EPYIVHTNIF Q
Sbjct: 63  NQYLFGKINMQIKLVPGNSAGTVAAYYLRSDESKWDEIDFEFLGNLSGEPYIVHTNIFTQ 122

Query: 124 GKGDREQQFYL 135
           GKGDREQQFYL
Sbjct: 123 GKGDREQQFYL 133

[Close]
BLAST of CmaCh05G006690 vs. NCBI nr
Match: gi|480296301|emb|CCH26407.1| (xyloglucan endotransglycosylase [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 5.8e-54
Identity = 106/128 (82.81%), Postives = 113/128 (88.28%), Query Frame = 1 

Query: 7   PLCLVVLVVCLLGFSGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSRNQY 66
           PL  VVL+VCLLGF  A D+N +LEITWGGDRAK LD GN LTLSLDKGSGSGF SRNQY
Sbjct: 6   PLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQSRNQY 65

Query: 67  VFAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQGKG 126
           +F KI+MQIKLV GNSAGTVTAYYLRS ES+WDEIDFEFLGNLS +PYIVHTNIF QGKG
Sbjct: 66  LFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIFTQGKG 125

Query: 127 DREQQFYL 135
           DREQQFYL
Sbjct: 126 DREQQFYL 133

[Close]
BLAST of CmaCh05G006690 vs. NCBI nr
Match: gi|449462733|ref|XP_004149095.1| (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 5.8e-54
Identity = 106/128 (82.81%), Postives = 113/128 (88.28%), Query Frame = 1 

Query: 7   PLCLVVLVVCLLGFSGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSRNQY 66
           PL  VVL+VCLLGF  A D+N +LEITWGGDRAK LD GN LTLSLDKGSGSGF SRNQY
Sbjct: 6   PLYSVVLLVCLLGFGSAGDLNKDLEITWGGDRAKLLDAGNTLTLSLDKGSGSGFQSRNQY 65

Query: 67  VFAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQGKG 126
           +F KI+MQIKLV GNSAGTVTAYYLRS ES+WDEIDFEFLGNLS +PYIVHTNIF QGKG
Sbjct: 66  LFGKINMQIKLVHGNSAGTVTAYYLRSDESRWDEIDFEFLGNLSGDPYIVHTNIFTQGKG 125

Query: 127 DREQQFYL 135
           DREQQFYL
Sbjct: 126 DREQQFYL 133

[Close]
BLAST of CmaCh05G006690 vs. NCBI nr
Match: gi|187372996|gb|ACD03232.1| (xyloglucan endotransglucosylase/hydrolase 8 [Malus domestica])

HSP 1 Score: 181.8 bits (460), Expect = 7.9e-43
Identity = 89/135 (65.93%), Postives = 106/135 (78.52%), Query Frame = 1 

Query: 4   ASPPLCLVVLVVCLLGF----SGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSG 63
           AS    L++L + LL F    + A D+N + +ITWG  RAK L+ G  LTLSLDK SGSG
Sbjct: 2   ASYTTTLILLPIFLLSFVVAPASAADLNQDFDITWGDGRAKILNNGELLTLSLDKASGSG 61

Query: 64  FWSRNQYVFAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTN 123
           F S+++Y+F KIDMQ+KLVPGNSAGTVTAYYL SK S WDEIDFEFLGNLS +PYI+HTN
Sbjct: 62  FQSKHEYLFGKIDMQLKLVPGNSAGTVTAYYLSSKGSTWDEIDFEFLGNLSGDPYILHTN 121

Query: 124 IFVQGKGDREQQFYL 135
           +F QGKG+REQQFYL
Sbjct: 122 VFSQGKGNREQQFYL 136

[Close]
BLAST of CmaCh05G006690 vs. NCBI nr
Match: gi|920682249|gb|KOM29021.1| (hypothetical protein LR48_Vigan627s007000 [Vigna angularis])

HSP 1 Score: 181.4 bits (459), Expect = 1.0e-42
Identity = 88/131 (67.18%), Postives = 104/131 (79.39%), Query Frame = 1 

Query: 5   SPPLCLV-VLVVCLLGFSGAVDMNGELEITWGGDRAKFLDGGNELTLSLDKGSGSGFWSR 64
           SP L L+ +L+      S A + N + +ITWG  RAK L+  N LTLSLD+ SGSGF S+
Sbjct: 6   SPSLPLLPILLSAYFLLSAAANFNQDFQITWGDGRAKILNNANLLTLSLDRASGSGFQSK 65

Query: 65  NQYVFAKIDMQIKLVPGNSAGTVTAYYLRSKESKWDEIDFEFLGNLSCEPYIVHTNIFVQ 124
           N+Y+F KIDMQ+KLVPGNSAGTVTAYYLRS+ S WDEIDFEFLGNLS +PYIVHTN+F Q
Sbjct: 66  NEYLFGKIDMQLKLVPGNSAGTVTAYYLRSEGSSWDEIDFEFLGNLSGDPYIVHTNVFTQ 125

Query: 125 GKGDREQQFYL 135
           GKG+REQQFYL
Sbjct: 126 GKGNREQQFYL 136

The following BLAST results are available for this feature:
BLAST of CmaCh05G006690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
XTH23_ARATH1.3e-4061.19Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis tha... [more]
XTH24_ARATH1.6e-4065.18Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=... [more]
XTH25_ARATH1.6e-4066.09Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis tha... [more]
XTH2_SOYBN1.4e-3963.78Xyloglucan endotransglucosylase/hydrolase 2 OS=Glycine max PE=2 SV=1[more]
XTH21_ARATH9.0e-3958.46Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis tha... [more]
BLAST of CmaCh05G006690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGP8_CUCSA4.1e-5482.81Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=Csa_2G049350 PE=... [more]
N0DX45_CUCSA4.1e-5482.81Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth7 PE=3 SV=1[more]
C0IRI1_MALDO5.5e-4365.93Xyloglucan endotransglucosylase/hydrolase OS=Malus domestica PE=2 SV=1[more]
A0A0L9TF38_PHAAN7.2e-4367.18Xyloglucan endotransglucosylase/hydrolase OS=Phaseolus angularis GN=LR48_Vigan62... [more]
A0A0S3R7U0_PHAAN7.2e-4367.18Xyloglucan endotransglucosylase/hydrolase OS=Vigna angularis var. angularis GN=V... [more]
BLAST of CmaCh05G006690 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25810.17.1e-4261.19 xyloglucan endotransglycosylase 6[more]
AT4G30270.19.3e-4265.18 xyloglucan endotransglucosylase/hydrolase 24[more]
AT5G57550.19.3e-4266.09 xyloglucan endotransglucosylase/hydrolase 25[more]
AT4G14130.15.1e-4061.79 xyloglucan endotransglucosylase/hydrolase 15[more]
AT2G18800.15.1e-4058.46 xyloglucan endotransglucosylase/hydrolase 21[more]
BLAST of CmaCh05G006690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069885|ref|XP_008452257.1|8.1e-5682.44PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucumi... [more]
gi|480296301|emb|CCH26407.1|5.8e-5482.81xyloglucan endotransglycosylase [Cucumis sativus][more]
gi|449462733|ref|XP_004149095.1|5.8e-5482.81PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Cucumi... [more]
gi|187372996|gb|ACD03232.1|7.9e-4365.93xyloglucan endotransglucosylase/hydrolase 8 [Malus domestica][more]
gi|920682249|gb|KOM29021.1|1.0e-4267.18hypothetical protein LR48_Vigan627s007000 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000757GH16
IPR008263GH16_AS
IPR013320ConA-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042546 cell wall biogenesis
biological_process GO:0071555 cell wall organization
biological_process GO:0010411 xyloglucan metabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0042545 cell wall modification
biological_process GO:0080022 primary root development
cellular_component GO:0048046 apoplast
cellular_component GO:0005618 cell wall
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0016762 xyloglucan:xyloglucosyl transferase activity
molecular_function GO:0080039 xyloglucan endotransglucosylase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G006690.1CmaCh05G006690.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000757Glycoside hydrolase family 16PFAMPF00722Glyco_hydro_16coord: 29..133
score: 1.4
IPR000757Glycoside hydrolase family 16PROFILEPS51762GH16_2coord: 1..134
score: 12
IPR008263Glycoside hydrolase, family 16, active sitePROSITEPS01034GH16_1coord: 100..110
scor
IPR013320Concanavalin A-like lectin/glucanase domainGENE3DG3DSA:2.60.120.200coord: 23..134
score: 9.0
IPR013320Concanavalin A-like lectin/glucanase domainunknownSSF49899Concanavalin A-like lectins/glucanasescoord: 27..134
score: 1.24
NoneNo IPR availablePANTHERPTHR31062FAMILY NOT NAMEDcoord: 8..134
score: 1.6
NoneNo IPR availablePANTHERPTHR31062:SF32XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 25-RELATEDcoord: 8..134
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh05G006690CmoCh05G007020Cucurbita moschata (Rifu)cmacmoB786
CmaCh05G006690Lsi11G007260Bottle gourd (USVL1VR-Ls)cmalsiB709
CmaCh05G006690MELO3C017482.2Melon (DHL92) v3.6.1cmamedB812
CmaCh05G006690CsaV3_2G007980Cucumber (Chinese Long) v3cmacucB0928
CmaCh05G006690Cla97C06G122580Watermelon (97103) v2cmawmbB827
CmaCh05G006690Carg15250Silver-seed gourdcarcmaB1096
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh05G006690CmaCh10G004050Cucurbita maxima (Rimu)cmacmaB116
CmaCh05G006690CmaCh11G004040Cucurbita maxima (Rimu)cmacmaB168
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh05G006690Cucurbita maxima (Rimu)cmacmaB117
CmaCh05G006690Cucurbita maxima (Rimu)cmacmaB196
CmaCh05G006690Cucumber (Gy14) v1cgycmaB0185
CmaCh05G006690Cucurbita moschata (Rifu)cmacmoB758
CmaCh05G006690Cucurbita moschata (Rifu)cmacmoB760
CmaCh05G006690Cucurbita moschata (Rifu)cmacmoB769
CmaCh05G006690Wild cucumber (PI 183967)cmacpiB789
CmaCh05G006690Wild cucumber (PI 183967)cmacpiB795
CmaCh05G006690Cucumber (Chinese Long) v2cmacuB779
CmaCh05G006690Cucumber (Chinese Long) v2cmacuB786
CmaCh05G006690Melon (DHL92) v3.5.1cmameB720
CmaCh05G006690Melon (DHL92) v3.5.1cmameB737
CmaCh05G006690Watermelon (Charleston Gray)cmawcgB690
CmaCh05G006690Watermelon (Charleston Gray)cmawcgB705
CmaCh05G006690Watermelon (97103) v1cmawmB769
CmaCh05G006690Watermelon (97103) v1cmawmB772
CmaCh05G006690Cucurbita pepo (Zucchini)cmacpeB766
CmaCh05G006690Cucurbita pepo (Zucchini)cmacpeB774
CmaCh05G006690Cucurbita pepo (Zucchini)cmacpeB782
CmaCh05G006690Cucurbita pepo (Zucchini)cmacpeB796
CmaCh05G006690Cucumber (Gy14) v2cgybcmaB135
CmaCh05G006690Cucumber (Gy14) v2cgybcmaB136
CmaCh05G006690Cucumber (Gy14) v2cgybcmaB252
CmaCh05G006690Melon (DHL92) v3.6.1cmamedB831
CmaCh05G006690Silver-seed gourdcarcmaB0083
CmaCh05G006690Cucumber (Chinese Long) v3cmacucB0921
CmaCh05G006690Watermelon (97103) v2cmawmbB808
CmaCh05G006690Watermelon (97103) v2cmawmbB823
CmaCh05G006690Wax gourdcmawgoB0925
CmaCh05G006690Wax gourdcmawgoB0973