CmaCh05G006590 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh05G006590
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTetraspanin-31
LocationCma_Chr05 : 3371980 .. 3372767 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGAATTCAGCAACGTCCTCGTCGGAATCCTTAACTTCACCACCATCTCACTCTCGATCCCGATTCTCCGGGCCGGCGTTTGGCTGAGCAAACAAGGAAGCAACAAACCCGTAATCATAATCGGCGTGTTTCTGATATTGATTTCTCTCGCCGGTCTTCTCGGAGCTTTCTGTAGAGGCTCATGGCTTCTATGGCTTTACCTTCTTCTTATGTTTGTTCTTATTGTTATTCTCTTTTTTGTCACCATTTTCGCTTTTGTGGTTACCACCAAGGTCCGGTGGTATAGCGATGATAAGGAGTTACTCGAACGGATTTTATATATGTTTAATCGGTTTGAATTTTTCATTAATTTTATTCAAATTACATTCGAGACTATATTTGTTATGTGTTATCTTCCGTTCGAATATTGGTTTATACAAATACTCATCTCTTTAGTATTCACATTACCCAACATTTGTTTTTTATTCTTAACATGGTATCAGAGTTTTTCATTTTTAACCGGAGTATAGATTTGGGATTACTCTAGTTGGCTGTCAAAGTGGGTGAATGAGGGTGAATGAGCGACTTGATTGATGGGAAGATCTGTTCCAGCTTTGATGTTATGTTAATGATATTGTTTTAAACAGTTCTACCTTAGAGTTTTGTAAAACCTAGTTGTTTGAATTTCGTTTCTGTTTCAAGTTTCAACTTTAAATCTTTTGTTTTGAATTGAAGATCTATTCGGTTGAGTTATGTATTAGATATATCGATCTCTATTGGAACTCTATTCAGTCTAGCTCTTTAG

mRNA sequence

ATGCCTGAATTCAGCAACGTCCTCGTCGGAATCCTTAACTTCACCACCATCTCACTCTCGATCCCGATTCTCCGGGCCGGCGTTTGGCTGAGCAAACAAGGAAGCAACAAACCCGTAATCATAATCGGCGTGTTTCTGATATTGATTTCTCTCGCCGGTCTTCTCGGAGCTTTCTGTAGAGGCTCATGGCTTCTATGGCTTTACCTTCTTCTTATGTTTGTTCTTATTGTTATTCTCTTTTTTGTCACCATTTTCGCTTTTGTGGTTACCACCAAGGTCCGGTGGTATAGCGATGATAAGGAGTTACTCGAACGGATTTTATATATGTTTAATCGATCTATTCGGTTGAGTTATGTATTAGATATATCGATCTCTATTGGAACTCTATTCAGTCTAGCTCTTTAG

Coding sequence (CDS)

ATGCCTGAATTCAGCAACGTCCTCGTCGGAATCCTTAACTTCACCACCATCTCACTCTCGATCCCGATTCTCCGGGCCGGCGTTTGGCTGAGCAAACAAGGAAGCAACAAACCCGTAATCATAATCGGCGTGTTTCTGATATTGATTTCTCTCGCCGGTCTTCTCGGAGCTTTCTGTAGAGGCTCATGGCTTCTATGGCTTTACCTTCTTCTTATGTTTGTTCTTATTGTTATTCTCTTTTTTGTCACCATTTTCGCTTTTGTGGTTACCACCAAGGTCCGGTGGTATAGCGATGATAAGGAGTTACTCGAACGGATTTTATATATGTTTAATCGATCTATTCGGTTGAGTTATGTATTAGATATATCGATCTCTATTGGAACTCTATTCAGTCTAGCTCTTTAG

Protein sequence

MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGSNKPVIIIGVFLILISLAGLLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTKVRWYSDDKELLERILYMFNRSIRLSYVLDISISIGTLFSLAL
Homology
[Close]
BLAST of CmaCh05G006590 vs. Swiss-Prot
Match: TET8_ARATH (Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 8.5e-21
Identity = 55/99 (55.56%), Postives = 76/99 (76.77%), Query Frame = 1 

Query: 1  MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGS-------NKPVIIIGVFLILISLAG 60
          M   SN LVGILNF    LSIPIL  G+WLS++GS       +KPVI +GVFL+++++AG
Sbjct: 1  MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60

Query: 61 LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          L+G+ CR +WLLW+YL +MF+LI+++F +T+FAFVVT K
Sbjct: 61 LIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNK 99

[Close]
BLAST of CmaCh05G006590 vs. Swiss-Prot
Match: TET9_ARATH (Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.0e-18
Identity = 53/99 (53.54%), Postives = 72/99 (72.73%), Query Frame = 1 

Query: 1  MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGS-------NKPVIIIGVFLILISLAG 60
          M  FSN LVGILNF    LS+PIL  G+WLS + +       +KP+I +GVFL++I++AG
Sbjct: 1  MVRFSNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAG 60

Query: 61 LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          ++G+ CR +WLLW YL +MF LI+I+   TIFAFVVT+K
Sbjct: 61 VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSK 99

[Close]
BLAST of CmaCh05G006590 vs. Swiss-Prot
Match: TET7_ARATH (Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.7e-18
Identity = 53/99 (53.54%), Postives = 71/99 (71.72%), Query Frame = 1 

Query: 1  MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGS-------NKPVIIIGVFLILISLAG 60
          M + SN L+GILNF T  LSIPIL AG+WL K  +       +KP++++G+FL+ +S+AG
Sbjct: 1  MVQCSNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAG 60

Query: 61 LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          L+GA CR S LLWLYL  MF+LI++ F  TIFAF VT +
Sbjct: 61 LVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNR 99

[Close]
BLAST of CmaCh05G006590 vs. Swiss-Prot
Match: TET4_ARATH (Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.5e-12
Identity = 44/93 (47.31%), Postives = 62/93 (66.67%), Query Frame = 1 

Query: 8  LVGILNFTTISLSIPILRAGVWLSKQGSNK--------PVIIIGVFLILISLAGLLGAFC 67
          L+G++NF T  LSIPIL  G+WLS + ++         P+IIIG+ +++ISLAG+ GA  
Sbjct: 7  LIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGACY 66

Query: 68 RGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          +  +L+WLYL  MF +I  L   TIFA+VVT K
Sbjct: 67 QNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDK 99

[Close]
BLAST of CmaCh05G006590 vs. Swiss-Prot
Match: TET3_ARATH (Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 9.4e-12
Identity = 42/96 (43.75%), Postives = 63/96 (65.62%), Query Frame = 1 

Query: 5  SNVLVGILNFTTISLSIPILRAGVWLSKQGSNK--------PVIIIGVFLILISLAGLLG 64
          SN L+G++NF T  LSIPIL  G+WLS + ++         P+I+IG+ ++++SLAG  G
Sbjct: 4  SNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGFAG 63

Query: 65 AFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          A  R  +L+WLYL++M ++I  L    IFA+ VT K
Sbjct: 64 ACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDK 99

[Close]
BLAST of CmaCh05G006590 vs. TrEMBL
Match: A0A0A0LJ53_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G037260 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-24
Identity = 73/99 (73.74%), Postives = 79/99 (79.80%), Query Frame = 1 

Query: 1  MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGS-------NKPVIIIGVFLILISLAG 60
          M   SN LVGILNF T  LSIPIL AGVWLSKQGS       +KP+IIIGVFL+L+SLAG
Sbjct: 1  MVRISNNLVGILNFITFLLSIPILWAGVWLSKQGSTECEKYLDKPIIIIGVFLLLVSLAG 60

Query: 61 LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          LLGA CR SWLLW+YLL+MFVLIVILF  TIFAFVVT K
Sbjct: 61 LLGACCRISWLLWVYLLVMFVLIVILFAFTIFAFVVTNK 99

[Close]
BLAST of CmaCh05G006590 vs. TrEMBL
Match: I1LVX1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G091000 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.8e-23
Identity = 68/99 (68.69%), Postives = 78/99 (78.79%), Query Frame = 1 

Query: 1   MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGSN-------KPVIIIGVFLILISLAG 60
           M  FSN ++G+LNF T  LSIPIL AGVWLSKQG+        KPVI +GVFL+L+SLAG
Sbjct: 27  MVRFSNNVIGLLNFLTFLLSIPILVAGVWLSKQGATECERWLEKPVIALGVFLMLVSLAG 86

Query: 61  LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
           L+GA CR SWLLWLYLL+MFVLIV+LF  TIFAFVVT K
Sbjct: 87  LVGACCRVSWLLWLYLLVMFVLIVLLFAFTIFAFVVTNK 125

[Close]
BLAST of CmaCh05G006590 vs. TrEMBL
Match: A0A0R4J5L5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G069300 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.8e-23
Identity = 68/99 (68.69%), Postives = 78/99 (78.79%), Query Frame = 1 

Query: 1  MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGSN-------KPVIIIGVFLILISLAG 60
          M  FSN ++G+LNF T  LSIPIL AGVWLSKQG+        KPVI +GVFL+L+SLAG
Sbjct: 1  MVRFSNNVIGLLNFLTFLLSIPILVAGVWLSKQGATECERWLEKPVIALGVFLMLVSLAG 60

Query: 61 LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          L+GA CR SWLLWLYLL+MFVLIV+LF  TIFAFVVT K
Sbjct: 61 LVGACCRVSWLLWLYLLVMFVLIVLLFAFTIFAFVVTNK 99

[Close]
BLAST of CmaCh05G006590 vs. TrEMBL
Match: A0A0B2Q7B9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_005733 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.8e-23
Identity = 68/99 (68.69%), Postives = 78/99 (78.79%), Query Frame = 1 

Query: 1  MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGSN-------KPVIIIGVFLILISLAG 60
          M  FSN ++G+LNF T  LSIPIL AGVWLSKQG+        KPVI +GVFL+L+SLAG
Sbjct: 1  MVRFSNNVIGLLNFLTFLLSIPILVAGVWLSKQGATECERWLEKPVIALGVFLMLVSLAG 60

Query: 61 LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          L+GA CR SWLLWLYLL+MFVLIV+LF  TIFAFVVT K
Sbjct: 61 LVGACCRVSWLLWLYLLVMFVLIVLLFAFTIFAFVVTNK 99

[Close]
BLAST of CmaCh05G006590 vs. TrEMBL
Match: A0A0B2RSL4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_032938 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.8e-23
Identity = 68/99 (68.69%), Postives = 78/99 (78.79%), Query Frame = 1 

Query: 1  MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGSN-------KPVIIIGVFLILISLAG 60
          M  FSN ++G+LNF T  LSIPIL AGVWLSKQG+        KPVI +GVFL+L+SLAG
Sbjct: 1  MVRFSNNVIGLLNFLTFLLSIPILVAGVWLSKQGATECERCREKPVIALGVFLMLVSLAG 60

Query: 61 LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          L+GA CR SWLLWLYLL+MFVLIV+LF  TIFAFVVT K
Sbjct: 61 LVGACCRVSWLLWLYLLVMFVLIVLLFAFTIFAFVVTNK 99

[Close]
BLAST of CmaCh05G006590 vs. TAIR10
Match: AT2G23810.1 (AT2G23810.1 tetraspanin8)

HSP 1 Score: 101.3 bits (251), Expect = 4.8e-22
Identity = 55/99 (55.56%), Postives = 76/99 (76.77%), Query Frame = 1 

Query: 1  MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGS-------NKPVIIIGVFLILISLAG 60
          M   SN LVGILNF    LSIPIL  G+WLS++GS       +KPVI +GVFL+++++AG
Sbjct: 1  MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60

Query: 61 LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          L+G+ CR +WLLW+YL +MF+LI+++F +T+FAFVVT K
Sbjct: 61 LIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNK 99

[Close]
BLAST of CmaCh05G006590 vs. TAIR10
Match: AT4G30430.1 (AT4G30430.1 tetraspanin9)

HSP 1 Score: 92.8 bits (229), Expect = 1.7e-19
Identity = 53/99 (53.54%), Postives = 72/99 (72.73%), Query Frame = 1 

Query: 1  MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGS-------NKPVIIIGVFLILISLAG 60
          M  FSN LVGILNF    LS+PIL  G+WLS + +       +KP+I +GVFL++I++AG
Sbjct: 1  MVRFSNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAG 60

Query: 61 LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          ++G+ CR +WLLW YL +MF LI+I+   TIFAFVVT+K
Sbjct: 61 VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSK 99

[Close]
BLAST of CmaCh05G006590 vs. TAIR10
Match: AT4G28050.1 (AT4G28050.1 tetraspanin7)

HSP 1 Score: 91.7 bits (226), Expect = 3.8e-19
Identity = 53/99 (53.54%), Postives = 71/99 (71.72%), Query Frame = 1 

Query: 1  MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGS-------NKPVIIIGVFLILISLAG 60
          M + SN L+GILNF T  LSIPIL AG+WL K  +       +KP++++G+FL+ +S+AG
Sbjct: 1  MVQCSNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAG 60

Query: 61 LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          L+GA CR S LLWLYL  MF+LI++ F  TIFAF VT +
Sbjct: 61 LVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNR 99

[Close]
BLAST of CmaCh05G006590 vs. TAIR10
Match: AT5G60220.1 (AT5G60220.1 tetraspanin4)

HSP 1 Score: 72.0 bits (175), Expect = 3.1e-13
Identity = 44/93 (47.31%), Postives = 62/93 (66.67%), Query Frame = 1 

Query: 8  LVGILNFTTISLSIPILRAGVWLSKQGSNK--------PVIIIGVFLILISLAGLLGAFC 67
          L+G++NF T  LSIPIL  G+WLS + ++         P+IIIG+ +++ISLAG+ GA  
Sbjct: 7  LIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGIAGACY 66

Query: 68 RGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          +  +L+WLYL  MF +I  L   TIFA+VVT K
Sbjct: 67 QNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDK 99

[Close]
BLAST of CmaCh05G006590 vs. TAIR10
Match: AT3G45600.1 (AT3G45600.1 tetraspanin3)

HSP 1 Score: 71.2 bits (173), Expect = 5.3e-13
Identity = 42/96 (43.75%), Postives = 63/96 (65.62%), Query Frame = 1 

Query: 5  SNVLVGILNFTTISLSIPILRAGVWLSKQGSNK--------PVIIIGVFLILISLAGLLG 64
          SN L+G++NF T  LSIPIL  G+WLS + ++         P+I+IG+ ++++SLAG  G
Sbjct: 4  SNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGFAG 63

Query: 65 AFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          A  R  +L+WLYL++M ++I  L    IFA+ VT K
Sbjct: 64 ACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDK 99

[Close]
BLAST of CmaCh05G006590 vs. NCBI nr
Match: gi|659069908|ref|XP_008452368.1| (PREDICTED: tetraspanin-8-like [Cucumis melo])

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-25
Identity = 74/99 (74.75%), Postives = 80/99 (80.81%), Query Frame = 1 

Query: 1  MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGS-------NKPVIIIGVFLILISLAG 60
          MP  SN LVGILNF T  LSIPIL AGVWLSKQGS       +KP+IIIGVFL+L+SLAG
Sbjct: 1  MPRISNNLVGILNFVTFLLSIPILWAGVWLSKQGSTECEKYLDKPIIIIGVFLLLVSLAG 60

Query: 61 LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          LLGA CR SWLLW+YLL+MFVLIVILF  TIFAFVVT K
Sbjct: 61 LLGACCRISWLLWVYLLVMFVLIVILFAFTIFAFVVTNK 99

[Close]
BLAST of CmaCh05G006590 vs. NCBI nr
Match: gi|449453924|ref|XP_004144706.1| (PREDICTED: tetraspanin-8-like [Cucumis sativus])

HSP 1 Score: 120.9 bits (302), Expect = 1.7e-24
Identity = 73/99 (73.74%), Postives = 79/99 (79.80%), Query Frame = 1 

Query: 1  MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGS-------NKPVIIIGVFLILISLAG 60
          M   SN LVGILNF T  LSIPIL AGVWLSKQGS       +KP+IIIGVFL+L+SLAG
Sbjct: 1  MVRISNNLVGILNFITFLLSIPILWAGVWLSKQGSTECEKYLDKPIIIIGVFLLLVSLAG 60

Query: 61 LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          LLGA CR SWLLW+YLL+MFVLIVILF  TIFAFVVT K
Sbjct: 61 LLGACCRISWLLWVYLLVMFVLIVILFAFTIFAFVVTNK 99

[Close]
BLAST of CmaCh05G006590 vs. NCBI nr
Match: gi|947070043|gb|KRH18934.1| (hypothetical protein GLYMA_13G091000 [Glycine max])

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-23
Identity = 68/99 (68.69%), Postives = 78/99 (78.79%), Query Frame = 1 

Query: 1   MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGSN-------KPVIIIGVFLILISLAG 60
           M  FSN ++G+LNF T  LSIPIL AGVWLSKQG+        KPVI +GVFL+L+SLAG
Sbjct: 27  MVRFSNNVIGLLNFLTFLLSIPILVAGVWLSKQGATECERWLEKPVIALGVFLMLVSLAG 86

Query: 61  LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
           L+GA CR SWLLWLYLL+MFVLIV+LF  TIFAFVVT K
Sbjct: 87  LVGACCRVSWLLWLYLLVMFVLIVLLFAFTIFAFVVTNK 125

[Close]
BLAST of CmaCh05G006590 vs. NCBI nr
Match: gi|734408434|gb|KHN34762.1| (hypothetical protein glysoja_032938 [Glycine soja])

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-23
Identity = 68/99 (68.69%), Postives = 78/99 (78.79%), Query Frame = 1 

Query: 1  MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGSN-------KPVIIIGVFLILISLAG 60
          M  FSN ++G+LNF T  LSIPIL AGVWLSKQG+        KPVI +GVFL+L+SLAG
Sbjct: 1  MVRFSNNVIGLLNFLTFLLSIPILVAGVWLSKQGATECERCREKPVIALGVFLMLVSLAG 60

Query: 61 LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          L+GA CR SWLLWLYLL+MFVLIV+LF  TIFAFVVT K
Sbjct: 61 LVGACCRVSWLLWLYLLVMFVLIVLLFAFTIFAFVVTNK 99

[Close]
BLAST of CmaCh05G006590 vs. NCBI nr
Match: gi|356562521|ref|XP_003549518.1| (PREDICTED: tetraspanin-8 [Glycine max])

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-23
Identity = 68/99 (68.69%), Postives = 78/99 (78.79%), Query Frame = 1 

Query: 1  MPEFSNVLVGILNFTTISLSIPILRAGVWLSKQGSN-------KPVIIIGVFLILISLAG 60
          M  FSN ++G+LNF T  LSIPIL AGVWLSKQG+        KPVI +GVFL+L+SLAG
Sbjct: 1  MVRFSNNVIGLLNFLTFLLSIPILVAGVWLSKQGATECERWLEKPVIALGVFLMLVSLAG 60

Query: 61 LLGAFCRGSWLLWLYLLLMFVLIVILFFVTIFAFVVTTK 93
          L+GA CR SWLLWLYLL+MFVLIV+LF  TIFAFVVT K
Sbjct: 61 LVGACCRVSWLLWLYLLVMFVLIVLLFAFTIFAFVVTNK 99

The following BLAST results are available for this feature:
BLAST of CmaCh05G006590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TET8_ARATH8.5e-2155.56Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1[more]
TET9_ARATH3.0e-1853.54Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1[more]
TET7_ARATH6.7e-1853.54Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1[more]
TET4_ARATH5.5e-1247.31Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1[more]
TET3_ARATH9.4e-1243.75Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1[more]
BLAST of CmaCh05G006590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJ53_CUCSA1.2e-2473.74Uncharacterized protein OS=Cucumis sativus GN=Csa_2G037260 PE=3 SV=1[more]
I1LVX1_SOYBN2.8e-2368.69Uncharacterized protein OS=Glycine max GN=GLYMA_13G091000 PE=3 SV=1[more]
A0A0R4J5L5_SOYBN2.8e-2368.69Uncharacterized protein OS=Glycine max GN=GLYMA_17G069300 PE=3 SV=1[more]
A0A0B2Q7B9_GLYSO2.8e-2368.69Uncharacterized protein OS=Glycine soja GN=glysoja_005733 PE=3 SV=1[more]
A0A0B2RSL4_GLYSO2.8e-2368.69Uncharacterized protein OS=Glycine soja GN=glysoja_032938 PE=3 SV=1[more]
BLAST of CmaCh05G006590 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G23810.14.8e-2255.56 tetraspanin8[more]
AT4G30430.11.7e-1953.54 tetraspanin9[more]
AT4G28050.13.8e-1953.54 tetraspanin7[more]
AT5G60220.13.1e-1347.31 tetraspanin4[more]
AT3G45600.15.3e-1343.75 tetraspanin3[more]
BLAST of CmaCh05G006590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069908|ref|XP_008452368.1|1.1e-2574.75PREDICTED: tetraspanin-8-like [Cucumis melo][more]
gi|449453924|ref|XP_004144706.1|1.7e-2473.74PREDICTED: tetraspanin-8-like [Cucumis sativus][more]
gi|947070043|gb|KRH18934.1|4.1e-2368.69hypothetical protein GLYMA_13G091000 [Glycine max][more]
gi|734408434|gb|KHN34762.1|4.1e-2368.69hypothetical protein glysoja_032938 [Glycine soja][more]
gi|356562521|ref|XP_003549518.1|4.1e-2368.69PREDICTED: tetraspanin-8 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018499Tetraspanin/Peripherin
IPR018503Tetraspanin_CS
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G006590.1CmaCh05G006590.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018499Tetraspanin/PeripherinPFAMPF00335Tetraspannincoord: 6..93
score: 5.0
IPR018503Tetraspanin, conserved sitePROSITEPS00421TM4_1coord: 43..65
scor
NoneNo IPR availablePANTHERPTHR32191FAMILY NOT NAMEDcoord: 3..92
score: 3.3
NoneNo IPR availablePANTHERPTHR32191:SF2TETRASPANIN-11-RELATEDcoord: 3..92
score: 3.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh05G006590CmoCh05G006920Cucurbita moschata (Rifu)cmacmoB786
CmaCh05G006590Lsi11G007140Bottle gourd (USVL1VR-Ls)cmalsiB709
CmaCh05G006590Cp4.1LG11g05860Cucurbita pepo (Zucchini)cmacpeB766
CmaCh05G006590MELO3C004104.2Melon (DHL92) v3.6.1cmamedB831
CmaCh05G006590CsaV3_2G007840Cucumber (Chinese Long) v3cmacucB0928
CmaCh05G006590Cla97C11G218500Watermelon (97103) v2cmawmbB808
CmaCh05G006590Bhi06G001189Wax gourdcmawgoB0925
CmaCh05G006590CsGy2G005610Cucumber (Gy14) v2cgybcmaB252
CmaCh05G006590Carg08350Silver-seed gourdcarcmaB0083
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh05G006590Cucumber (Gy14) v1cgycmaB0185
CmaCh05G006590Wild cucumber (PI 183967)cmacpiB795
CmaCh05G006590Cucumber (Chinese Long) v2cmacuB786
CmaCh05G006590Melon (DHL92) v3.5.1cmameB737
CmaCh05G006590Watermelon (Charleston Gray)cmawcgB690
CmaCh05G006590Watermelon (97103) v1cmawmB769