CmaCh05G003940 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh05G003940
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Plant protein of unknown function (DUF247)
Location	Cma_Chr05 : 1727621 .. 1728771 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAACCATACAATATGCCAGGAATTAGTGAAGGTGAAGAAGGTGAACAACCTCGTCGTAATGTTATTGTAGAATGTAGCATCTTTTGAGTTCTTAAACTGTTACGTAGTATGAATCATAGAGTCTATACCCCTCAAGTCATTTCTATAGGTCCATTTCACCATCATCGAAAGGATTTGTTAGCCACTGAGCCATATAAGCTTCGACGTTGTTCGAACTTTCTAAGCCGTCTAGGTAACGAGAGAGATTCATTGGAGTTGCTTAAGAAAAATACTCAAACTTGGATGAAAGAAGTTCGAAATTGGTATGCATAGCACATAAACATGAATGATAAGGAATTTGGTAACATGATGATTGTGGATGGTCGTTTCCTAGTAGAGTTTTTGATACAACATCATAACCGACACTGCCCAAATACATGCTTCCAAACTCCAAACAATTTAGATCTTACCTTCCACCAAAGATTTATCGAGCTATTTACTGATTTGATTATGTTGGAAAATCGAGTCCCTTTCTTCCTTCTTGAACGTTTGTTCTACCTTATACTAAATACCATCTCCATCTCCTTTGTATACTTAACCTATATGTTTTTTAAACTCGAACTTGTTGACAATTATTCTCTTTCTGATCTATCGTCGATAAAACCAAAGTACTTCTTTGATTTGTTAAGCTTCTACTTCGTTGTCTCTAAGACATCTCTAGAGAACAATAATAATAATAGCCCGATAACTCCTCCATCGATAACTGAGCTTCACGAGGCTGGTGTCACCATTAAGAAAGCAGAAAATGCTGAATGTGCAATGAACCTAAGCTTCCAAAATGGGATTTTCACAATCCCACAATCCCACCTTTTAACCGTTGATGATTTCTTCGAACACACCATGCAAAATCTAATAGCATTTGAGCATTTTCCCTTGGAAAATGAAAGCAAGCGTATCCAATATATCGCATTCATGGATGATTTGATAAGAAAGGAGAAATATTTTAATTTACTTGTGAAAGCTGGAATCATAATCAACAAGATTGGAGATAGTGATAAAGAAGTTTCAAACTTGTTTAACAATCTCTGCAAATTTGTTGAACAACCATGTGATGGCGAGTTCAACAATATCAGCAAAGCTTTGCATAAGCATTGTGATAGACGATGA

mRNA sequence

ATGACAAACCATACAATATGCCAGGAATTAGTGAAGGTGAAGAAGGTGAACAACCTCGTCGTAATCTTCTACTTCGTTGTCTCTAAGACATCTCTAGAGAACAATAATAATAATAGCCCGATAACTCCTCCATCGATAACTGAGCTTCACGAGGCTGGTGTCACCATTAAGAAAGCAGAAAATGCTGAATGTGCAATGAACCTAAGCTTCCAAAATGGGATTTTCACAATCCCACAATCCCACCTTTTAACCGTTGATGATTTCTTCGAACACACCATGCAAAATCTAATAGCATTTGAGCATTTTCCCTTGGAAAATGAAAGCAAGCGTATCCAATATATCGCATTCATGGATGATTTGATAAGAAAGGAGAAATATTTTAATTTACTTGTGAAAGCTGGAATCATAATCAACAAGATTGGAGATAGTGATAAAGAAGTTTCAAACTTGTTTAACAATCTCTGCAAATTTGTTGAACAACCATGTGATGGCGAGTTCAACAATATCAGCAAAGCTTTGCATAAGCATTGTGATAGACGATGA

Coding sequence (CDS)

ATGACAAACCATACAATATGCCAGGAATTAGTGAAGGTGAAGAAGGTGAACAACCTCGTCGTAATCTTCTACTTCGTTGTCTCTAAGACATCTCTAGAGAACAATAATAATAATAGCCCGATAACTCCTCCATCGATAACTGAGCTTCACGAGGCTGGTGTCACCATTAAGAAAGCAGAAAATGCTGAATGTGCAATGAACCTAAGCTTCCAAAATGGGATTTTCACAATCCCACAATCCCACCTTTTAACCGTTGATGATTTCTTCGAACACACCATGCAAAATCTAATAGCATTTGAGCATTTTCCCTTGGAAAATGAAAGCAAGCGTATCCAATATATCGCATTCATGGATGATTTGATAAGAAAGGAGAAATATTTTAATTTACTTGTGAAAGCTGGAATCATAATCAACAAGATTGGAGATAGTGATAAAGAAGTTTCAAACTTGTTTAACAATCTCTGCAAATTTGTTGAACAACCATGTGATGGCGAGTTCAACAATATCAGCAAAGCTTTGCATAAGCATTGTGATAGACGATGA

Protein sequence

MTNHTICQELVKVKKVNNLVVIFYFVVSKTSLENNNNNSPITPPSITELHEAGVTIKKAENAECAMNLSFQNGIFTIPQSHLLTVDDFFEHTMQNLIAFEHFPLENESKRIQYIAFMDDLIRKEKYFNLLVKAGIIINKIGDSDKEVSNLFNNLCKFVEQPCDGEFNNISKALHKHCDRR

Homology

[Close]

BLAST of CmaCh05G003940 vs. TrEMBL
Match: A0A0A0LM96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.9e-38
Identity = 94/179 (52.51%), Postives = 119/179 (66.48%), Query Frame = 1


Query: 9   ELVKVKKVNNLVVIFYFVVSKTSLENNNNNSP------ITPPSITELHEAGVTIKKAENA 68
           +++ +K  + +  + ++ V     E++  +S       I PPSITEL EAGVTIKKAEN 
Sbjct: 224 DILSIKPKHFIDFLSFYFVPHHRCEHDQESSDMKEWNVIIPPSITELCEAGVTIKKAENT 283

Query: 69  ECAMNLSFQNGIFTIPQSHLLTVDDFFEHTMQNLIAFEHFPLE-NESKRIQYIAFMDDLI 128
           +C MN+ F+NGI  IP  H   +DD+FE  M+NL+AFEHFP+E N +  I Y+ FMD LI
Sbjct: 284 KCLMNIRFENGILEIPPLH---IDDYFEPMMRNLLAFEHFPVEVNNTYVIPYVTFMDYLI 343

Query: 129 RKEKYFNLLVKAGIIINKIGDSDKEVSNLFNNLCKFV-EQPCDGEFNNISKALHKHCDR 180
             EK  NLLVK  IIIN IG SD+EVS LFNNLCKFV   P D  FNNIS+ L +HCDR
Sbjct: 344 STEKDVNLLVKEKIIINDIGGSDREVSQLFNNLCKFVSSSPNDNYFNNISEGLREHCDR 399

[Close]

BLAST of CmaCh05G003940 vs. TrEMBL
Match: A0A0A0LLX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.9e-36
Identity = 86/141 (60.99%), Postives = 101/141 (71.63%), Query Frame = 1


Query: 41  ITPPSITELHEAGVTIKKAENAECAMNLSFQNGIFTIPQSHLLTVDDFFEHTMQNLIAFE 100
           I PPSITEL EAGVTIKKAEN +C MN+ F+NGI  IP  H   +DD+FE  M++L+AFE
Sbjct: 291 IIPPSITELFEAGVTIKKAENTKCLMNIKFKNGILEIPPLH---IDDYFEPMMRDLLAFE 350

Query: 101 HFPLENESKR-IQYIAFMDDLIRKEKYFNLLVKAGIIINKIGDSDKEVSNLFNNLCKFVE 160
           HFP+E ++   I YI FMD LI  E   NLLVK  IIIN IG SD+EVS LFNNLCKFV 
Sbjct: 351 HFPIEVQNTYVIPYITFMDYLISTENDVNLLVKEKIIINDIGGSDREVSQLFNNLCKFVS 410

Query: 161 QPCDG-EFNNISKALHKHCDR 180
              +   FN+IS+ L KHCDR
Sbjct: 411 SSFNNIYFNDISERLRKHCDR 428

[Close]

BLAST of CmaCh05G003940 vs. TrEMBL
Match: A0A0A0LSF4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380060 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.2e-31
Identity = 83/180 (46.11%), Postives = 114/180 (63.33%), Query Frame = 1


Query: 9   ELVKVKKVNNLVVIFYFV------VSKTSLENNNNNSPITPPSITELHEAGVTIKKAENA 68
           ++++ KK NN   + +F       + +   + N++   ++PPSITEL+E+GVT+KKA+N 
Sbjct: 291 DMIQNKKKNNYSFLSFFSRLLCCELCQNPDKENSDQEFLSPPSITELNESGVTVKKAKNV 350

Query: 69  ECAMNLSFQNGIFTIPQSHLLTVDDFFEHTMQNLIAFEHFPLEN-ESKRIQYIAFMDDLI 128
           E  MN++F NG+  IP    L + D FE   +NL+AFE F   N +    QYI FMD+LI
Sbjct: 351 ESLMNITFTNGVLEIPP---LNICDEFELLFRNLVAFEQFQAGNGKMYATQYIIFMDNLI 410

Query: 129 RKEKYFNLLVKAGIIINKIGDSDKEVSNLFNNLCKFVE-QPCDGEFNNISKALHKHCDRR 181
             +K   LLV +G+IIN IG S KEVS LFN L KF+   P   EFN+ISK LHKHC+RR
Sbjct: 411 NTKKDVRLLVNSGVIINNIGGSYKEVSKLFNKLGKFISGSPTSSEFNDISKDLHKHCNRR 467

[Close]

BLAST of CmaCh05G003940 vs. TrEMBL
Match: A0A0A0LQ57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380610 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-28
Identity = 74/141 (52.48%), Postives = 95/141 (67.38%), Query Frame = 1


Query: 41  ITPPSITELHEAGVTIK--KAENAECAMNLSFQNGIFTIPQSHLLTVDDFFEHTMQNLIA 100
           ++PP+ TEL EAGVTIK  K +N  C MN+SF+NG+  IP    + ++  FE  ++N++A
Sbjct: 290 LSPPTTTELCEAGVTIKVAKRKNNLCFMNISFKNGVLEIPP---IVIEGTFEVLIRNVLA 349

Query: 101 FEHFPLENESK-RIQYIAFMDDLIRKEKYFNLLVKAGIIINKIGDSDKEVSNLFNNLCKF 160
           FE FP  N+ K  IQY+ F+DDLI  EK   LLVKAG+IIN  G SDKEVS LFN+L K 
Sbjct: 350 FEIFPAGNQKKYAIQYVTFLDDLISTEKDLCLLVKAGVIINDTGGSDKEVSELFNSLTKL 409

Query: 161 VEQPCDGEFNNISKALHKHCD 179
           V  P    F++ SKAL  HCD
Sbjct: 410 VTTPLPSYFDDTSKALRVHCD 427

[Close]

BLAST of CmaCh05G003940 vs. TrEMBL
Match: A0A0A0LPJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380630 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.0e-28
Identity = 68/153 (44.44%), Postives = 104/153 (67.97%), Query Frame = 1


Query: 30  TSLENNNNNSPITPPSITELHEAGVTIKKAENAE-CAMNLSFQNGIFTIPQSHLLTVDDF 89
           T+ EN+ ++  ++PPS+TEL EAGV +K  +N + C MN+SF+NG+  IP    L +D  
Sbjct: 200 TNEENSEHHFRLSPPSMTELCEAGVIVKAVKNEDTCFMNISFENGVLKIP---CLEIDCT 259

Query: 90  FEHTMQNLIAFEHFPLENESK-RIQYIAFMDDLIRKEKYFNLLVKAGIIINKIGDSDKEV 149
           FE  ++N+IAF+ +P  N++   I Y+ F+DDLI  E+  +LL   G+IIN +G SDK++
Sbjct: 260 FEIVIRNVIAFDQYPAGNKNAYAIHYVLFLDDLINTEQDAHLLANVGVIINTLGGSDKDI 319

Query: 150 SNLFNNLCKFVEQPCDGEFNNISKALHKHCDRR 181
           + +FNNL K+V  P    F++ISK L KHC++R
Sbjct: 320 TEMFNNLSKYVTFPVCSHFDDISKDLRKHCNKR 349

[Close]

BLAST of CmaCh05G003940 vs. TAIR10
Match: AT4G31980.1 (AT4G31980.1 unknown protein)

HSP 1 Score: 82.4 bits (202), Expect = 3.1e-16
Identity = 49/135 (36.30%), Postives = 77/135 (57.04%), Query Frame = 1


Query: 44  PSITELHEAGVTIKKAENAECAMNLSFQNGIFTIPQSHLLTVDDFFEHTMQNLIAFEHFP 103
           P  TELH AGV  K AE + C +++SF +G+  IP    + VDD  E   +N+I FE   
Sbjct: 506 PEATELHTAGVRFKPAETSSCLLDISFADGVLKIP---TIVVDDLTESLYKNIIGFEQCR 565

Query: 104 LENESKRIQYIAFMDDLIRKEKYFNLLVKAGIIINKIGDSDKEVSNLFNNLCKFVEQPCD 163
             N++  + YI  +   I+     +LL+ +GII+N +G+S  +VSNLFN++ K V     
Sbjct: 566 CSNKN-FLDYIMLLGCFIKSPTDADLLIHSGIIVNYLGNS-VDVSNLFNSISKEVIYDRR 625

Query: 164 GEFNNISKALHKHCD 179
             F+ +S+ L  +C+
Sbjct: 626 FYFSMLSENLQAYCN 635

[Close]

BLAST of CmaCh05G003940 vs. TAIR10
Match: AT3G50150.1 (AT3G50150.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 73.9 bits (180), Expect = 1.1e-13
Identity = 47/136 (34.56%), Postives = 75/136 (55.15%), Query Frame = 1


Query: 46  ITELHEAGVTIKKAENAECAMNLSFQNGIFTIPQSHLLTVDDFFEHTMQNLIAFEHFPLE 105
           +TEL  AGV   + E  +   ++ F+NG   IP+   L + D  +    NLIAFE    +
Sbjct: 331 VTELRGAGVNFMRKETGQL-WDIEFKNGYLKIPK---LLIHDGTKSLFSNLIAFEQCHTQ 390

Query: 106 NESKRIQYIAFMDDLIRKEKYFNLLVKAGIIINKIGDSDKEVSNLFNNLCK-FVEQPCDG 165
           + +    YI FMD+LI   +  + L   GII + +G SD EV++LFN LCK  +  P DG
Sbjct: 391 SSNNITSYIIFMDNLINSSQDVSYLHHDGIIEHWLG-SDSEVADLFNRLCKEVIFDPKDG 450

Query: 166 EFNNISKALHKHCDRR 181
             + +S+ ++++  R+
Sbjct: 451 YLSQLSREVNRYYSRK 461

[Close]

BLAST of CmaCh05G003940 vs. TAIR10
Match: AT3G50170.1 (AT3G50170.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-13
Identity = 48/136 (35.29%), Postives = 77/136 (56.62%), Query Frame = 1


Query: 46  ITELHEAGVTIKKAENAECAMNLSFQNGIFTIPQSHLLTVDDFFEHTMQNLIAFEHFPLE 105
           +TEL EAGV  +K +  +   ++ F+NG   IP+   L + D  +    NLIAFE   +E
Sbjct: 361 VTELREAGVKFRKRKT-DRFWDIEFKNGYLEIPK---LLIHDGTKSLFSNLIAFEQCHIE 420

Query: 106 NESKRIQYIAFMDDLIRKEKYFNLLVKAGIIINKIGDSDKEVSNLFNNLC-KFVEQPCDG 165
           + +    YI FMD+LI   +  + L   GII + +G SD EV++LFN LC + V  P D 
Sbjct: 421 SSNHITSYIIFMDNLINSSEDVSYLHYCGIIEHWLG-SDSEVADLFNRLCQEVVFDPKDS 480

Query: 166 EFNNISKALHKHCDRR 181
             + +S  ++++ +R+
Sbjct: 481 HLSRLSGDVNRYYNRK 491

[Close]

BLAST of CmaCh05G003940 vs. TAIR10
Match: AT5G11290.1 (AT5G11290.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 70.1 bits (170), Expect = 1.6e-12
Identity = 44/135 (32.59%), Postives = 74/135 (54.81%), Query Frame = 1


Query: 45  SITELHEAGVTIKKAENAECAMNLSFQNGIFTIPQSHLLTVDDFFEHTMQNLIAFEHFPL 104
           S  E+  AGV ++ A+N  CA+++SF NG+ TIP+   + ++D  E   +N+I FE    
Sbjct: 181 SAKEIQNAGVKLQPADNNTCALDISFANGVLTIPK---IKINDITESLYRNIILFEQCH- 240

Query: 105 ENESKRIQYIAFMDDLIRKEKYFNLLVKAGIIINKIGDSDKEVSNLFNNLCKFVEQPCDG 164
             ++  I Y+ F+   IR      L +  GII+N+ G+++ +VS LFN++ K  E    G
Sbjct: 241 RLDAYFIHYMRFLSCFIRSPMDAELFIDHGIIVNRFGNAE-DVSRLFNSILK--ETSYSG 300

Query: 165 -EFNNISKALHKHCD 179
             +  +   L  HC+
Sbjct: 301 FYYKTVYGNLQAHCN 308

[Close]

BLAST of CmaCh05G003940 vs. TAIR10
Match: AT3G50160.1 (AT3G50160.1 Plant protein of unknown function (DUF247))

HSP 1 Score: 67.0 bits (162), Expect = 1.3e-11
Identity = 48/136 (35.29%), Postives = 72/136 (52.94%), Query Frame = 1


Query: 46  ITELHEAGVTIKKAENAECAMNLSFQNGIFTIPQSHLLTVDDFFEHTMQNLIAFEHFPLE 105
           +TEL  AGV   + E      ++ F+NG   IP+   L + D  +    NLIAFE   ++
Sbjct: 323 VTELRNAGVEFMRKETGHF-WDIEFKNGYLKIPK---LLIHDGTKSLFLNLIAFEQCHIK 382

Query: 106 NESKRIQYIAFMDDLIRKEKYFNLLVKAGIIINKIGDSDKEVSNLFNNLCK-FVEQPCDG 165
           +  K   YI FMD+LI   +  + L   GII N +G SD EVS+LFN L K  +  P DG
Sbjct: 383 SSKKITSYIIFMDNLINSSEDVSYLHHYGIIENWLG-SDSEVSDLFNGLGKEVIFDPNDG 442

Query: 166 EFNNISKALHKHCDRR 181
             + ++  ++ +  R+
Sbjct: 443 YLSALTGEVNIYYRRK 453

[Close]

BLAST of CmaCh05G003940 vs. NCBI nr
Match: gi|700207809|gb|KGN62928.1| (hypothetical protein Csa_2G380080 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 2.7e-38
Identity = 94/179 (52.51%), Postives = 119/179 (66.48%), Query Frame = 1


Query: 9   ELVKVKKVNNLVVIFYFVVSKTSLENNNNNSP------ITPPSITELHEAGVTIKKAENA 68
           +++ +K  + +  + ++ V     E++  +S       I PPSITEL EAGVTIKKAEN 
Sbjct: 224 DILSIKPKHFIDFLSFYFVPHHRCEHDQESSDMKEWNVIIPPSITELCEAGVTIKKAENT 283

Query: 69  ECAMNLSFQNGIFTIPQSHLLTVDDFFEHTMQNLIAFEHFPLE-NESKRIQYIAFMDDLI 128
           +C MN+ F+NGI  IP  H   +DD+FE  M+NL+AFEHFP+E N +  I Y+ FMD LI
Sbjct: 284 KCLMNIRFENGILEIPPLH---IDDYFEPMMRNLLAFEHFPVEVNNTYVIPYVTFMDYLI 343

Query: 129 RKEKYFNLLVKAGIIINKIGDSDKEVSNLFNNLCKFV-EQPCDGEFNNISKALHKHCDR 180
             EK  NLLVK  IIIN IG SD+EVS LFNNLCKFV   P D  FNNIS+ L +HCDR
Sbjct: 344 STEKDVNLLVKEKIIINDIGGSDREVSQLFNNLCKFVSSSPNDNYFNNISEGLREHCDR 399

[Close]

BLAST of CmaCh05G003940 vs. NCBI nr
Match: gi|778674379|ref|XP_011650197.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 5.6e-36
Identity = 86/141 (60.99%), Postives = 101/141 (71.63%), Query Frame = 1


Query: 41  ITPPSITELHEAGVTIKKAENAECAMNLSFQNGIFTIPQSHLLTVDDFFEHTMQNLIAFE 100
           I PPSITEL EAGVTIKKAEN +C MN+ F+NGI  IP  H   +DD+FE  M++L+AFE
Sbjct: 291 IIPPSITELFEAGVTIKKAENTKCLMNIKFKNGILEIPPLH---IDDYFEPMMRDLLAFE 350

Query: 101 HFPLENESKR-IQYIAFMDDLIRKEKYFNLLVKAGIIINKIGDSDKEVSNLFNNLCKFVE 160
           HFP+E ++   I YI FMD LI  E   NLLVK  IIIN IG SD+EVS LFNNLCKFV 
Sbjct: 351 HFPIEVQNTYVIPYITFMDYLISTENDVNLLVKEKIIINDIGGSDREVSQLFNNLCKFVS 410

Query: 161 QPCDG-EFNNISKALHKHCDR 180
              +   FN+IS+ L KHCDR
Sbjct: 411 SSFNNIYFNDISERLRKHCDR 428

[Close]

BLAST of CmaCh05G003940 vs. NCBI nr
Match: gi|659088838|ref|XP_008445188.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 156.8 bits (395), Expect = 3.7e-35
Identity = 90/181 (49.72%), Postives = 121/181 (66.85%), Query Frame = 1


Query: 9   ELVKVKKVNNLVVIFYFVVSKTSLENNNNNSP------ITPPSITELHEAGVTIKKAE-N 68
           +++ +K  + +  + +++V +   E++  ++       I PPSITE+ EAGVTIKKA+ N
Sbjct: 259 DILSIKPKHFIDFLSFYLVPEHQYEHDQKSNDEEEWNIIIPPSITEICEAGVTIKKADKN 318

Query: 69  AECAMNLSFQNGIFTIPQSHLLTVDDFFEHTMQNLIAFEHFPLENESKR-IQYIAFMDDL 128
            +C +N+ F+NGI  IP  H   +DD+FE  M+NL+AFEHFP+E ++   I Y+ FMD L
Sbjct: 319 TKCLLNIRFENGILEIPPLH---IDDYFEPMMRNLLAFEHFPVEVKNTYVIPYLTFMDYL 378

Query: 129 IRKEKYFNLLVKAGIIINKIGDSDKEVSNLFNNLCKFV-EQPCDGEFNNISKALHKHCDR 181
           I  EK  NLLVK  IIIN IG SD+EVS LFNNLCKFV   P D  FN+ SKAL  HCDR
Sbjct: 379 IITEKDVNLLVKEKIIINDIGGSDREVSQLFNNLCKFVSSSPNDNYFNDTSKALRDHCDR 436

[Close]

BLAST of CmaCh05G003940 vs. NCBI nr
Match: gi|659089573|ref|XP_008445583.1| (PREDICTED: LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like [Cucumis melo])

HSP 1 Score: 145.2 bits (365), Expect = 1.1e-31
Identity = 90/174 (51.72%), Postives = 109/174 (62.64%), Query Frame = 1


Query: 14  KKVNNLVVIFYFVVSKTSLENNNNNSP-----ITPPSITELHEAGVTIKKAENAECAMNL 73
           KK N   + F+  +    L  N +N         PPSITEL E+GVTI+KA+NA+   N+
Sbjct: 355 KKNNYNFLSFFSTLFCCQLWQNPDNKKKMIRNFCPPSITELCESGVTIEKAKNAKYLTNI 414

Query: 74  SFQNGIFTIPQSHLLTVDDFFEHTMQNLIAFEHFPLENESK-RIQYIAFMDDLIRKEKYF 133
           +F+NG+  IP  H+    D FE   +NLIAFE FP  NE+    QYI FMDDLI  EK  
Sbjct: 415 TFKNGVLKIPHLHIY---DEFELMFRNLIAFEQFPAGNENMYATQYILFMDDLISTEKDV 474

Query: 134 NLLVKAGIIINKIGDSDKEVSNLFNNLCKFVEQ-PCDGEFNNISKALHKHCDRR 181
            LLV +G+IIN IG SDKEVS LFNNL KFV Q P    FN+ISKAL KHC+ R
Sbjct: 475 RLLVNSGVIINNIGGSDKEVSELFNNLGKFVNQCPSPYMFNHISKALRKHCNGR 525

[Close]

BLAST of CmaCh05G003940 vs. NCBI nr
Match: gi|449442190|ref|XP_004138865.1| (PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 3.2e-31
Identity = 83/180 (46.11%), Postives = 114/180 (63.33%), Query Frame = 1


Query: 9   ELVKVKKVNNLVVIFYFV------VSKTSLENNNNNSPITPPSITELHEAGVTIKKAENA 68
           ++++ KK NN   + +F       + +   + N++   ++PPSITEL+E+GVT+KKA+N 
Sbjct: 291 DMIQNKKKNNYSFLSFFSRLLCCELCQNPDKENSDQEFLSPPSITELNESGVTVKKAKNV 350

Query: 69  ECAMNLSFQNGIFTIPQSHLLTVDDFFEHTMQNLIAFEHFPLEN-ESKRIQYIAFMDDLI 128
           E  MN++F NG+  IP    L + D FE   +NL+AFE F   N +    QYI FMD+LI
Sbjct: 351 ESLMNITFTNGVLEIPP---LNICDEFELLFRNLVAFEQFQAGNGKMYATQYIIFMDNLI 410

Query: 129 RKEKYFNLLVKAGIIINKIGDSDKEVSNLFNNLCKFVE-QPCDGEFNNISKALHKHCDRR 181
             +K   LLV +G+IIN IG S KEVS LFN L KF+   P   EFN+ISK LHKHC+RR
Sbjct: 411 NTKKDVRLLVNSGVIINNIGGSYKEVSKLFNKLGKFISGSPTSSEFNDISKDLHKHCNRR 467

The following BLAST results are available for this feature:

BLAST of CmaCh05G003940 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh05G003940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM96_CUCSA	1.9e-38	52.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380080 PE=4 SV=1	[more]
A0A0A0LLX1_CUCSA	3.9e-36	60.99	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380590 PE=4 SV=1	[more]
A0A0A0LSF4_CUCSA	2.2e-31	46.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380060 PE=4 SV=1	[more]
A0A0A0LQ57_CUCSA	1.0e-28	52.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380610 PE=4 SV=1	[more]
A0A0A0LPJ5_CUCSA	3.0e-28	44.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G380630 PE=4 SV=1	[more]

BLAST of CmaCh05G003940 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31980.1	3.1e-16	36.30	unknown protein	[more]
AT3G50150.1	1.1e-13	34.56	Plant protein of unknown function (DUF247)	[more]
AT3G50170.1	1.4e-13	35.29	Plant protein of unknown function (DUF247)	[more]
AT5G11290.1	1.6e-12	32.59	Plant protein of unknown function (DUF247)	[more]
AT3G50160.1	1.3e-11	35.29	Plant protein of unknown function (DUF247)	[more]

BLAST of CmaCh05G003940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207809\|gb\|KGN62928.1\|	2.7e-38	52.51	hypothetical protein Csa_2G380080 [Cucumis sativus]	[more]
gi\|778674379\|ref\|XP_011650197.1\|	5.6e-36	60.99	PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus]	[more]
gi\|659088838\|ref\|XP_008445188.1\|	3.7e-35	49.72	PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]	[more]
gi\|659089573\|ref\|XP_008445583.1\|	1.1e-31	51.72	PREDICTED: LOW QUALITY PROTEIN: UPF0481 protein At3g47200-like [Cucumis melo]	[more]
gi\|449442190\|ref\|XP_004138865.1\|	3.2e-31	46.11	PREDICTED: UPF0481 protein At3g47200-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004158	DUF247_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G003940.1	CmaCh05G003940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004158	Protein of unknown function DUF247, plant	PFAM	PF03140	DUF247	coord: 17..179 score: 4.2
None	No IPR available	PANTHER	PTHR31549	FAMILY NOT NAMED	coord: 40..180 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh05G003940	Cla022310	Watermelon (97103) v1	cmawmB753
CmaCh05G003940	Csa2G380080	Cucumber (Chinese Long) v2	cmacuB792
CmaCh05G003940	CmoCh05G004050	Cucurbita moschata (Rifu)	cmacmoB786
CmaCh05G003940	MELO3C011247.2	Melon (DHL92) v3.6.1	cmamedB818

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh05G003940	Silver-seed gourd	carcmaB0189
CmaCh05G003940	Silver-seed gourd	carcmaB1357
CmaCh05G003940	Cucumber (Chinese Long) v3	cmacucB0935
CmaCh05G003940	Cucumber (Chinese Long) v3	cmacucB0940
CmaCh05G003940	Watermelon (97103) v2	cmawmbB818
CmaCh05G003940	Watermelon (97103) v2	cmawmbB829
CmaCh05G003940	Watermelon (97103) v2	cmawmbB832
CmaCh05G003940	Wax gourd	cmawgoB0939
CmaCh05G003940	Wax gourd	cmawgoB0964
CmaCh05G003940	Cucurbita maxima (Rimu)	cmacmaB199
CmaCh05G003940	Cucurbita maxima (Rimu)	cmacmaB434
CmaCh05G003940	Cucumber (Gy14) v1	cgycmaB0462
CmaCh05G003940	Cucumber (Gy14) v1	cgycmaB0874
CmaCh05G003940	Cucurbita moschata (Rifu)	cmacmoB770
CmaCh05G003940	Cucurbita moschata (Rifu)	cmacmoB783
CmaCh05G003940	Wild cucumber (PI 183967)	cmacpiB801
CmaCh05G003940	Wild cucumber (PI 183967)	cmacpiB806
CmaCh05G003940	Cucumber (Chinese Long) v2	cmacuB797
CmaCh05G003940	Melon (DHL92) v3.5.1	cmameB725
CmaCh05G003940	Melon (DHL92) v3.5.1	cmameB733
CmaCh05G003940	Watermelon (Charleston Gray)	cmawcgB700
CmaCh05G003940	Watermelon (Charleston Gray)	cmawcgB712
CmaCh05G003940	Watermelon (97103) v1	cmawmB756
CmaCh05G003940	Cucurbita pepo (Zucchini)	cmacpeB766
CmaCh05G003940	Cucurbita pepo (Zucchini)	cmacpeB778
CmaCh05G003940	Cucurbita pepo (Zucchini)	cmacpeB797
CmaCh05G003940	Bottle gourd (USVL1VR-Ls)	cmalsiB727
CmaCh05G003940	Bottle gourd (USVL1VR-Ls)	cmalsiB739
CmaCh05G003940	Cucumber (Gy14) v2	cgybcmaB258
CmaCh05G003940	Cucumber (Gy14) v2	cgybcmaB422
CmaCh05G003940	Melon (DHL92) v3.6.1	cmamedB828