CmaCh05G002970 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTGAGCTTGAGAAGCTTCGGGTCCAGTCGGCCCGTAAAACTCACTCGGATAAGCAGTATTATTGAACCAGACAAAACAACAAGCAATAAAACCAAAAACGGAGTGAGATTTTAATAACCTATAATGTGTACGGACAGAAGAGTCGAGTTGATTAATTTAAGAAGCTGCACTGACCATACTTTCAGTTTCAGATGTGTTGAAAACAATTCCCAGAACGTTGTCCACCTAAACCCGAGGCTGTTATAGATGCAATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGATAATCGGTTTTTTACTACCAACCACAAATTTCATGTTGGCCCAAGTACTCATACTGGAAAAAGAGGAGAATCGGTTTTTTACTACCAACCACAAATTTCATGTTGGCCCAAGTACTCATACTGGAAATTACGATCAAGGATTACTCTATCAACCATCATCTACTTCAGAGATCATCCCTCCTGAAACACTGCACAAAATTTAATCCGGTGAATAAGTTAGCCATGTAAAAAATTGGATTTTATAGACAATTCTAACATGTGGTCAAGCTTTGAGCCACGTTTCAAGATAAATTGTTTTAGAAAATATGGACGAGTCACATTGCTGGCATGCTACAGGCAACACGTTTTAGACAAACATCTCCTAAAAAATAATATTTTATTAAATTTTTCATTTTAAAAGGTCAAAAAAATAAATCTTATACGTAA ATGCTTGAGCTTGAGAAGCTTCGGGTCCAGTCGGCCCAACGTTGTCCACCTAAACCCGAGGCTGTTATAGATGCAATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGATAATCGGTTTTTTACTACCAACCACAAATTTCATGTTGGCCCAAGTCAAAAAAATAAATCTTATACGTAA ATGCTTGAGCTTGAGAAGCTTCGGGTCCAGTCGGCCCAACGTTGTCCACCTAAACCCGAGGCTGTTATAGATGCAATAACAAAACTTCGTAAGAAAATATCTCGAGAAATCTATGAAGATCGAATTAAGTCTCAAGAGGATAATCGGTTTTTTACTACCAACCACAAATTTCATGTTGGCCCAAGTCAAAAAAATAAATCTTATACGTAA MLELEKLRVQSAQRCPPKPEAVIDAITKLRKKISREIYEDRIKSQEDNRFFTTNHKFHVGPSQKNKSYT
BLAST of CmaCh05G002970 vs. Swiss-Prot
Match: NDHK_CUCSA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis sativus GN=ndhK PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.1e-19 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 1
BLAST of CmaCh05G002970 vs. Swiss-Prot
Match: NDHK_OENAR (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera argillicola GN=ndhK PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 2.4e-19 Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 1
BLAST of CmaCh05G002970 vs. Swiss-Prot
Match: NDHK_OENPA (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera parviflora GN=ndhK PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 2.4e-19 Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 1
BLAST of CmaCh05G002970 vs. Swiss-Prot
Match: NDHK_OENGL (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera glazioviana GN=ndhK PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 2.4e-19 Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 1
BLAST of CmaCh05G002970 vs. Swiss-Prot
Match: NDHK_OENBI (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Oenothera biennis GN=ndhK PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 2.4e-19 Identity = 45/54 (83.33%), Postives = 49/54 (90.74%), Query Frame = 1
BLAST of CmaCh05G002970 vs. TrEMBL
Match: A0A0S2IEN2_9ROSI (NADH-quinone oxidoreductase subunit B OS=Cucurbita ecuadorensis GN=ndhK PE=3 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.4e-18 Identity = 48/54 (88.89%), Postives = 50/54 (92.59%), Query Frame = 1
BLAST of CmaCh05G002970 vs. TrEMBL
Match: A0A0S2IFI4_9ROSI (NADH-quinone oxidoreductase subunit B OS=Cucurbita andreana GN=ndhK PE=3 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.4e-18 Identity = 48/54 (88.89%), Postives = 50/54 (92.59%), Query Frame = 1
BLAST of CmaCh05G002970 vs. TrEMBL
Match: G3ETY9_CUCME (NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Cucumis melo subsp. melo GN=ndhK PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 9.2e-18 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 1
BLAST of CmaCh05G002970 vs. TrEMBL
Match: A0A0S2IFG7_9ROSI (NADH-quinone oxidoreductase subunit B OS=Cucurbita digitata GN=ndhK PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.2e-17 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 1
BLAST of CmaCh05G002970 vs. TrEMBL
Match: A0A0S2IF12_9ROSI (NADH-quinone oxidoreductase subunit B OS=Cucurbita cordata GN=ndhK PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.2e-17 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 1
BLAST of CmaCh05G002970 vs. TAIR10
Match: ATCG00430.1 (ATCG00430.1 photosystem II reaction center protein G) HSP 1 Score: 77.8 bits (190), Expect = 2.9e-15 Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 1
BLAST of CmaCh05G002970 vs. NCBI nr
Match: gi|952954679|gb|ALO22038.1| (NdhK (plastid) [Cucurbita ecuadorensis]) HSP 1 Score: 99.8 bits (247), Expect = 2.0e-18 Identity = 48/54 (88.89%), Postives = 50/54 (92.59%), Query Frame = 1
BLAST of CmaCh05G002970 vs. NCBI nr
Match: gi|346578195|ref|YP_004841787.1| (NADH-plastoquinone oxidoreductase subunit K [Cucumis melo subsp. melo]) HSP 1 Score: 97.1 bits (240), Expect = 1.3e-17 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 1
BLAST of CmaCh05G002970 vs. NCBI nr
Match: gi|1002166188|ref|YP_009236284.1| (NADH-plastoquinone oxidoreductase subunit K (chloroplast) [Gynostemma pentaphyllum]) HSP 1 Score: 96.7 bits (239), Expect = 1.7e-17 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 1
BLAST of CmaCh05G002970 vs. NCBI nr
Match: gi|68164807|ref|YP_247603.1| (NADH dehydrogenase subunit K [Cucumis sativus]) HSP 1 Score: 96.7 bits (239), Expect = 1.7e-17 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 1
BLAST of CmaCh05G002970 vs. NCBI nr
Match: gi|952954396|gb|ALO21760.1| (NdhK (plastid) [Cucurbita argyrosperma]) HSP 1 Score: 96.7 bits (239), Expect = 1.7e-17 Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |