CmaCh05G002530 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTATTCCTGTTTATTCTACTTCAAATCGCCATGGAATATAGAGCATACCTTATGTTCATCATCAACGGAGCTTCCTATCACAGTCCAATCCAGATTCTAGGTCAATTTCCGCGCTAATCTTCACGGGTTTCTTCAATCGCTTGAACAGAGACGATCAAATATCGTTTAACAATCCTCATAAATAAATCAAACGAGAAAATATTTGAATTAACTAACGATTTTCATTCGAACCTTTGGTGAACAGATCCAAAAATGCAGGCGATCGTGAAAGCATTACGATCGTGGCAAGAGACGTTGAAGATCGCGAACTCGCAGCACTCGTGTAGGAGAGAAACGAATCAAGTGGAAAAATTTTTGGAAGGATCAGAATCAAGAGGTTCGTCTTCTCCACTGAAAGGTATGGAGAATATTACCGTGGCGGAGATCGTTTCGAGAAAGGGAGATGGAAGTATTGGCTCCTCGTGGTTTTCCTGCAGTGCGGATGATGCGGCCATTGATACCGTGCAAAATGTAGTGAGTTTGATTCGGTTTCGCCATTTCCAAAAAGCTCGAAAGCTTTTCTTGTTGAGAAGATTGAGGAATTTTTCTTTGCTGCAGATGGCTAGAAACAACGTTGGATCGTTGGTGGTGTTGAAGCCTGAAGGACAACACATCGCCGGAATTGTAACGGAAGGAGGTAACTGAAATGCTGATAGTATTAGGAAAATATCATAACATTGAAGGAGTTAGTAATAACTCCTACCCGATTATATGTAATAAGTCGTCGTTGTCGATTATATTAGTAAGCCGTTGTTGTTGACTTTTTGCTTATATTTCCATATAACATCAATTTTATCTCAAATCTTGCTTTTAAAAACTCTCTTTCGAAATCTCTCTATTCCGTTTTCTAAAACTTTCTTCTTGAACCGGGGCCTGAGGCTCGACCCCGTTTTCTTAAACTTTCTTAAAACTCTCTTTCGAAATTTCTCTATCCCGTTTTCTAAAACTTTCTTCTAGAACCGAGGCTAGAGGCTCGGCCCCATTTTCTAAAACTTTCTTTTTTAATCGAGACCAGAGGCTCGAGCATACGTCACTTGGCCGTAAGCGACGCAATAACAAATAGACTTAACTCACTTGTTGCTAGTAGTGAGTGTCACACAATCGCAAGTTCGCCGTAAGCGACGCAAGAACAAATAGACTTAACTCACTTAGTGCTAGAAGTGAGTGTCACACAATTATAAGTTCACCGTAAGCCGAACAAATAGGCTTAACTCACTTGTGCTAAAAGTGAGTATCCATCAAAGTGTGATTTATATTTAGTTTTTGCATTTTTTCACCATATCGAACTTACCATTGCCCCGTATAGGCATTATTCAGTATGTTTTAGTCATAAAACGAGCATACTAATGAGAAAGTTTGAAGATACAAAAAAATTACACGCATTATAGATTAAAATTTAAAATTATGATAGGTTCCTTAAAAAAAAAAAAAAAAAATTTCCAACAATTTTGCCATCCATCTAAAACACATTTGAATTCTAAGCAAATTCCAAAAATTAAATCAAGATTTCAAAATTTTTCGTTCTCTATTCCATGAATATTGAGTTGGGAATTGCTGTATTTTATGGTCCTCCTAAACAGACTATCTGAAGAAGATAATAGCAGATGGGAGATGTCCCATATTCACAAAAGTTGGGGAAATAATGACTTGTGAGGTTATTTTCTGTCTTCCCTCAGGCTACAAAACCAGATTACAAACAACAGTTCTCACTAACATATTTTTATTTTTCACGAACAGGACAAACTAGTAACCGTTACGTCCGACACGAACATCCTTAAAGCAATGCAGCTTATGACAGGTAAAAATACTAAGAACAGTGTCCTCTAGATTCTGAATTTACCATATAAAATGTAAGTCAGCTCCTTCTCCAACTGCATCAACGACCATCTAAGAAGGGAATAATCTAGATGAAGTTCTTGGCATTTGCAGAGAATCGCACAAGACATGTTCCTGTGATAGATGGCAAACTAGTTGGCATGATTTCTATAGTAGATGTTGTCAAAGCAGTGGTAAAGCAGCAAAATGGGGAACTCGAGCAAATAAACGAGTATATAAAAGGAGAATCCTATTAAAATTCGAGTTCTAAAAATTTTAAAACACATGATTCAGTACCTACTGTAACAGAAAGCATGCTTTATTGAAAGACAAGAGCCTGATAGTGGATACCATGTAAAGCAAACAAGCAAAAAATTTAAAAGAATCAGTTATTAAAGCATGTCG GTTATTCCTGTTTATTCTACTTCAAATCGCCATGGAATATAGAGCATACCTTATGTTCATCATCAACGGAGCTTCCTATCACAGTCCAATCCAGATTCTAGATCCAAAAATGCAGGCGATCGTGAAAGCATTACGATCGTGGCAAGAGACGTTGAAGATCGCGAACTCGCAGCACTCGTGTAGGAGAGAAACGAATCAAGTGGAAAAATTTTTGGAAGGATCAGAATCAAGAGGTTCGTCTTCTCCACTGAAAGGTATGGAGAATATTACCGTGGCGGAGATCGTTTCGAGAAAGGGAGATGGAAGTATTGGCTCCTCGTGGTTTTCCTGCAGTGCGGATGATGCGGCCATTGATACCGTGCAAAATGTAATGGCTAGAAACAACGTTGGATCGTTGGTGGTGTTGAAGCCTGAAGGACAACACATCGCCGGAATTGTAACGGAAGGAGACTATCTGAAGAAGATAATAGCAGATGGGAGATGTCCCATATTCACAAAAGTTGGGGAAATAATGACTTGTGAGGACAAACTAGTAACCGTTACGTCCGACACGAACATCCTTAAAGCAATGCAGCTTATGACAGAGAATCGCACAAGACATGTTCCTGTGATAGATGGCAAACTAGTTGGCATGATTTCTATAGTAGATGTTGTCAAAGCAGTGGTAAAGCAGCAAAATGGGGAACTCGAGCAAATAAACGAGTATATAAAAGGAGAATCCTATTAAAATTCGAGTTCTAAAAATTTTAAAACACATGATTCAGTACCTACTGTAACAGAAAGCATGCTTTATTGAAAGACAAGAGCCTGATAGTGGATACCATGTAAAGCAAACAAGCAAAAAATTTAAAAGAATCAGTTATTAAAGCATGTCG ATGGAATATAGAGCATACCTTATGTTCATCATCAACGGAGCTTCCTATCACAGTCCAATCCAGATTCTAGATCCAAAAATGCAGGCGATCGTGAAAGCATTACGATCGTGGCAAGAGACGTTGAAGATCGCGAACTCGCAGCACTCGTGTAGGAGAGAAACGAATCAAGTGGAAAAATTTTTGGAAGGATCAGAATCAAGAGGTTCGTCTTCTCCACTGAAAGGTATGGAGAATATTACCGTGGCGGAGATCGTTTCGAGAAAGGGAGATGGAAGTATTGGCTCCTCGTGGTTTTCCTGCAGTGCGGATGATGCGGCCATTGATACCGTGCAAAATGTAATGGCTAGAAACAACGTTGGATCGTTGGTGGTGTTGAAGCCTGAAGGACAACACATCGCCGGAATTGTAACGGAAGGAGACTATCTGAAGAAGATAATAGCAGATGGGAGATGTCCCATATTCACAAAAGTTGGGGAAATAATGACTTGTGAGGACAAACTAGTAACCGTTACGTCCGACACGAACATCCTTAAAGCAATGCAGCTTATGACAGAGAATCGCACAAGACATGTTCCTGTGATAGATGGCAAACTAGTTGGCATGATTTCTATAGTAGATGTTGTCAAAGCAGTGGTAAAGCAGCAAAATGGGGAACTCGAGCAAATAAACGAGTATATAAAAGGAGAATCCTATTAA MEYRAYLMFIINGASYHSPIQILDPKMQAIVKALRSWQETLKIANSQHSCRRETNQVEKFLEGSESRGSSSPLKGMENITVAEIVSRKGDGSIGSSWFSCSADDAAIDTVQNVMARNNVGSLVVLKPEGQHIAGIVTEGDYLKKIIADGRCPIFTKVGEIMTCEDKLVTVTSDTNILKAMQLMTENRTRHVPVIDGKLVGMISIVDVVKAVVKQQNGELEQINEYIKGESY
BLAST of CmaCh05G002530 vs. Swiss-Prot
Match: CBSX3_ARATH (CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis thaliana GN=CBSX3 PE=1 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.5e-36 Identity = 95/208 (45.67%), Postives = 137/208 (65.87%), Query Frame = 1
BLAST of CmaCh05G002530 vs. Swiss-Prot
Match: YBP3_ACIAM (Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens PE=3 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 6.4e-08 Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 1
BLAST of CmaCh05G002530 vs. Swiss-Prot
Match: Y525_METKA (Uncharacterized protein MK0525 OS=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=MK0525 PE=3 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 8.3e-08 Identity = 43/168 (25.60%), Postives = 90/168 (53.57%), Query Frame = 1
BLAST of CmaCh05G002530 vs. Swiss-Prot
Match: IMDH_PYRHO (Inosine-5'-monophosphate dehydrogenase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=guaB PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.2e-06 Identity = 41/125 (32.80%), Postives = 70/125 (56.00%), Query Frame = 1
BLAST of CmaCh05G002530 vs. Swiss-Prot
Match: Y2650_ARATH (CBS domain-containing protein CBSCBSPB2 OS=Arabidopsis thaliana GN=CBSCBSPB2 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.5e-06 Identity = 30/100 (30.00%), Postives = 57/100 (57.00%), Query Frame = 1
BLAST of CmaCh05G002530 vs. TrEMBL
Match: A0A0A0LNN1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G361780 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 3.8e-76 Identity = 156/208 (75.00%), Postives = 177/208 (85.10%), Query Frame = 1
BLAST of CmaCh05G002530 vs. TrEMBL
Match: M5XMM7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015008mg PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 2.7e-53 Identity = 125/209 (59.81%), Postives = 158/209 (75.60%), Query Frame = 1
BLAST of CmaCh05G002530 vs. TrEMBL
Match: W9RD83_9ROSA (CBS domain-containing protein CBSX3 OS=Morus notabilis GN=L484_025897 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 5.9e-53 Identity = 119/208 (57.21%), Postives = 155/208 (74.52%), Query Frame = 1
BLAST of CmaCh05G002530 vs. TrEMBL
Match: A0A0S3RBJ1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G035400 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.7e-52 Identity = 121/227 (53.30%), Postives = 161/227 (70.93%), Query Frame = 1
BLAST of CmaCh05G002530 vs. TrEMBL
Match: I1K7R3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G031300 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 2.3e-52 Identity = 105/158 (66.46%), Postives = 137/158 (86.71%), Query Frame = 1
BLAST of CmaCh05G002530 vs. TAIR10
Match: AT1G47271.1 (AT1G47271.1 Cystathionine beta-synthase (CBS) family protein) HSP 1 Score: 189.9 bits (481), Expect = 1.8e-48 Identity = 101/161 (62.73%), Postives = 129/161 (80.12%), Query Frame = 1
BLAST of CmaCh05G002530 vs. TAIR10
Match: AT5G10860.1 (AT5G10860.1 Cystathionine beta-synthase (CBS) family protein) HSP 1 Score: 154.5 bits (389), Expect = 8.2e-38 Identity = 95/208 (45.67%), Postives = 137/208 (65.87%), Query Frame = 1
BLAST of CmaCh05G002530 vs. TAIR10
Match: AT2G36500.1 (AT2G36500.1 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein) HSP 1 Score: 53.5 bits (127), Expect = 2.0e-07 Identity = 30/100 (30.00%), Postives = 57/100 (57.00%), Query Frame = 1
BLAST of CmaCh05G002530 vs. TAIR10
Match: AT3G52950.1 (AT3G52950.1 CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein) HSP 1 Score: 52.0 bits (123), Expect = 5.7e-07 Identity = 29/91 (31.87%), Postives = 54/91 (59.34%), Query Frame = 1
BLAST of CmaCh05G002530 vs. NCBI nr
Match: gi|778671386|ref|XP_004152690.2| (PREDICTED: CBS domain-containing protein CBSX3, mitochondrial isoform X1 [Cucumis sativus]) HSP 1 Score: 292.7 bits (748), Expect = 5.5e-76 Identity = 156/208 (75.00%), Postives = 177/208 (85.10%), Query Frame = 1
BLAST of CmaCh05G002530 vs. NCBI nr
Match: gi|700207495|gb|KGN62614.1| (hypothetical protein Csa_2G361780 [Cucumis sativus]) HSP 1 Score: 292.7 bits (748), Expect = 5.5e-76 Identity = 156/208 (75.00%), Postives = 177/208 (85.10%), Query Frame = 1
BLAST of CmaCh05G002530 vs. NCBI nr
Match: gi|778671390|ref|XP_011649629.1| (PREDICTED: CBS domain-containing protein CBSX3, mitochondrial isoform X2 [Cucumis sativus]) HSP 1 Score: 290.8 bits (743), Expect = 2.1e-75 Identity = 155/207 (74.88%), Postives = 176/207 (85.02%), Query Frame = 1
BLAST of CmaCh05G002530 vs. NCBI nr
Match: gi|659087976|ref|XP_008444736.1| (PREDICTED: CBS domain-containing protein CBSX3, mitochondrial isoform X2 [Cucumis melo]) HSP 1 Score: 282.3 bits (721), Expect = 7.4e-73 Identity = 155/207 (74.88%), Postives = 176/207 (85.02%), Query Frame = 1
BLAST of CmaCh05G002530 vs. NCBI nr
Match: gi|645228067|ref|XP_008220819.1| (PREDICTED: CBS domain-containing protein CBSX3, mitochondrial [Prunus mume]) HSP 1 Score: 219.2 bits (557), Expect = 7.7e-54 Identity = 126/209 (60.29%), Postives = 159/209 (76.08%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |