CmaCh05G000390 (gene) Cucurbita maxima (Rimu)

NameCmaCh05G000390
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr05 : 169558 .. 169785 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTATTTTGGTTGGAAGGAATGTTGTGGGGCCGGAGATAATAAATGAAAAAGAAGAAATGGTCAAGGCACACGAGCGAGAAGCGAGAAGCGAGAAGCGAGAAGCAGTGATCTCCGGGGCGGGGGAGGGGGCGGAGGAAACTGGGCGTATTTATTGCCTCTGCGCCACCAAACCCCTCTCCTTCTTCTTCTCTGTCTCTGATTATTTGATTCTGGAGTGGTGGTAG

mRNA sequence

ATGATTATTTTGGTTGGAAGGAATGTTGTGGGGCCGGAGATAATAAATGAAAAAGAAGAAATGGTCAAGGCACACGAGCGAGAAGCGAGAAGCGAGAAGCGAGAAGCAGTGATCTCCGGGGCGGGGGAGGGGGCGGAGGAAACTGGGCGTATTTATTGCCTCTGCGCCACCAAACCCCTCTCCTTCTTCTTCTCTGTCTCTGATTATTTGATTCTGGAGTGGTGGTAG

Coding sequence (CDS)

ATGATTATTTTGGTTGGAAGGAATGTTGTGGGGCCGGAGATAATAAATGAAAAAGAAGAAATGGTCAAGGCACACGAGCGAGAAGCGAGAAGCGAGAAGCGAGAAGCAGTGATCTCCGGGGCGGGGGAGGGGGCGGAGGAAACTGGGCGTATTTATTGCCTCTGCGCCACCAAACCCCTCTCCTTCTTCTTCTCTGTCTCTGATTATTTGATTCTGGAGTGGTGGTAG

Protein sequence

MIILVGRNVVGPEIINEKEEMVKAHEREARSEKREAVISGAGEGAEETGRIYCLCATKPLSFFFSVSDYLILEWW
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh05G000390.1CmaCh05G000390.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 15..35
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh05G000390Wild cucumber (PI 183967)cmacpiB793
CmaCh05G000390Wild cucumber (PI 183967)cmacpiB814
CmaCh05G000390Cucumber (Chinese Long) v2cmacuB784
CmaCh05G000390Cucumber (Chinese Long) v2cmacuB803
CmaCh05G000390Melon (DHL92) v3.5.1cmameB717
CmaCh05G000390Melon (DHL92) v3.5.1cmameB727
CmaCh05G000390Watermelon (Charleston Gray)cmawcgB699
CmaCh05G000390Watermelon (Charleston Gray)cmawcgB712
CmaCh05G000390Watermelon (97103) v1cmawmB753
CmaCh05G000390Watermelon (97103) v1cmawmB755
CmaCh05G000390Cucurbita pepo (Zucchini)cmacpeB764
CmaCh05G000390Cucurbita pepo (Zucchini)cmacpeB766
CmaCh05G000390Cucurbita pepo (Zucchini)cmacpeB776
CmaCh05G000390Cucurbita pepo (Zucchini)cmacpeB793
CmaCh05G000390Bottle gourd (USVL1VR-Ls)cmalsiB726
CmaCh05G000390Bottle gourd (USVL1VR-Ls)cmalsiB739
CmaCh05G000390Cucumber (Gy14) v2cgybcmaB250
CmaCh05G000390Cucumber (Gy14) v2cgybcmaB694
CmaCh05G000390Melon (DHL92) v3.6.1cmamedB807
CmaCh05G000390Melon (DHL92) v3.6.1cmamedB821
CmaCh05G000390Silver-seed gourdcarcmaB0340
CmaCh05G000390Silver-seed gourdcarcmaB0707
CmaCh05G000390Silver-seed gourdcarcmaB0885
CmaCh05G000390Silver-seed gourdcarcmaB1016
CmaCh05G000390Cucumber (Chinese Long) v3cmacucB0926
CmaCh05G000390Cucumber (Chinese Long) v3cmacucB0948
CmaCh05G000390Watermelon (97103) v2cmawmbB815
CmaCh05G000390Watermelon (97103) v2cmawmbB832
CmaCh05G000390Wax gourdcmawgoB0938
CmaCh05G000390Wax gourdcmawgoB0959
CmaCh05G000390Cucurbita maxima (Rimu)cmacmaB193
CmaCh05G000390Cucurbita maxima (Rimu)cmacmaB411
CmaCh05G000390Cucurbita maxima (Rimu)cmacmaB540
CmaCh05G000390Cucumber (Gy14) v1cgycmaB0808
CmaCh05G000390Cucumber (Gy14) v1cgycmaB1094
CmaCh05G000390Cucurbita moschata (Rifu)cmacmoB766
CmaCh05G000390Cucurbita moschata (Rifu)cmacmoB777
CmaCh05G000390Cucurbita moschata (Rifu)cmacmoB785
CmaCh05G000390Cucurbita moschata (Rifu)cmacmoB786