CmaCh04G028200 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAGTTCAGGTGAATTGATATTGATGTGTTTTATAATTCATTGATGTTTAGTTTCTTTTTTTATGCTTCTTATACTGGATTTCCTTATTCCCATGTCAGGCTTGTCAAGCAGATCTTGCAATAGGGCTTTATGCATGGGCACATTACCTTTTGCCCATAGTTAGTAGTAGAAGTTGTAATCCCCAGTCTAGAGTGAAGGTCGGTATAGTCAAGAGAACTGTTGCTGTTATCTAATATGCTGAAAACAATATGCAAGTTTTTTTTTTTACATTGTACCATTTGCAGGCTACTGAAAGGTTTGAGGCTATCTATCCAACCTTGAAGGAGGTTACACTTGCTGGCTCTCCTGGTAGTAAAGCATTGAAACAAGTTTCAGAGAAGATATTTAGTTTTGCTGCCAAAGCAGCAGGAGAAAGTATGATACTTTGATTTTCTTTCTTTTTTTTTGTACCATTTTGCATATCAACAGTGACTGAGAGAATATCCATTAATAGGTGTTTCAGAGCTATCTGGAGAAGCAACTAACGTTTTCATTTGGTGTTTGACACAAAATGTTGATTGCTACAAGCAATGGGTGAGTTATTCTAGTTCTCTTCCTATACATTTAATCATTTTCATTCCAATTTTCAACTGATCTGGAATATTTTCAAATTCATCCTTTAAAATATGCAATTGTATTTTGCAGGACAAGATTTATGAGGATAACCTAGCAGCTAGTGTTTCTGTTTTGAAAAAGCTTTCTGATGACGCCGAACTAGGCACCTCTTTCGAGTATGGGAAGCCGAAAATCCCCTGGTAACAAAACTGCACCAACTAGTTAGTCCTTTTAAATCCTTCTTGTAATCCTCTTGAGGATACAAAAGTAGTGGCTTTAGTAAGTTTTTAAGTTAATGCTGCTCAACAAGGCTCAATACTCATTTTAGCGTCTTTTAATAAGCCTTTGTGACTTGTTATTTAATGGTGTTAACTTTAAAATTTTGTGTGTTAATCATATATGACATATATAACATGATAACATCCTCTGATTAAGTTACATTACTTTTTTCTTAAAGGTAG ATGATAGTTCAGGCTTGTCAAGCAGATCTTGCAATAGGGCTTTATGCATGGGCACATTACCTTTTGCCCATAGTTAGTAGTAGAAGTTGTAATCCCCAGTCTAGAGTGAAGGCTACTGAAAGGTTTGAGGCTATCTATCCAACCTTGAAGGAGGTTACACTTGCTGGCTCTCCTGGTAGTAAAGCATTGAAACAAGTTTCAGAGAAGATATTTAGTTTTGCTGCCAAAGCAGCAGGAGAAAGTGTTTCAGAGCTATCTGGAGAAGCAACTAACGTTTTCATTTGGTGTTTGACACAAAATGTTGATTGCTACAAGCAATGGGACAAGATTTATGAGGATAACCTAGCAGCTAGTGTTTCTGTTTTGAAAAAGCTTTCTGATGACGCCGAACTAGGCACCTCTTTCGAGTATGGGAAGCCGAAAATCCCCTGGTAG ATGATAGTTCAGGCTTGTCAAGCAGATCTTGCAATAGGGCTTTATGCATGGGCACATTACCTTTTGCCCATAGTTAGTAGTAGAAGTTGTAATCCCCAGTCTAGAGTGAAGGCTACTGAAAGGTTTGAGGCTATCTATCCAACCTTGAAGGAGGTTACACTTGCTGGCTCTCCTGGTAGTAAAGCATTGAAACAAGTTTCAGAGAAGATATTTAGTTTTGCTGCCAAAGCAGCAGGAGAAAGTGTTTCAGAGCTATCTGGAGAAGCAACTAACGTTTTCATTTGGTGTTTGACACAAAATGTTGATTGCTACAAGCAATGGGACAAGATTTATGAGGATAACCTAGCAGCTAGTGTTTCTGTTTTGAAAAAGCTTTCTGATGACGCCGAACTAGGCACCTCTTTCGAGTATGGGAAGCCGAAAATCCCCTGGTAG MIVQACQADLAIGLYAWAHYLLPIVSSRSCNPQSRVKATERFEAIYPTLKEVTLAGSPGSKALKQVSEKIFSFAAKAAGESVSELSGEATNVFIWCLTQNVDCYKQWDKIYEDNLAASVSVLKKLSDDAELGTSFEYGKPKIPW
BLAST of CmaCh04G028200 vs. TrEMBL
Match: A0A0A0KMK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G031960 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 3.8e-50 Identity = 113/179 (63.13%), Postives = 120/179 (67.04%), Query Frame = 1
BLAST of CmaCh04G028200 vs. TrEMBL
Match: A0A0L9T6T5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan252s000900 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 2.6e-38 Identity = 90/156 (57.69%), Postives = 105/156 (67.31%), Query Frame = 1
BLAST of CmaCh04G028200 vs. TrEMBL
Match: A0A061E7P7_THECC (Transmembrane protein 214-A isoform 1 OS=Theobroma cacao GN=TCM_010966 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 9.8e-38 Identity = 88/179 (49.16%), Postives = 108/179 (60.34%), Query Frame = 1
BLAST of CmaCh04G028200 vs. TrEMBL
Match: A0A059BUQ1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02850 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 3.7e-37 Identity = 86/185 (46.49%), Postives = 109/185 (58.92%), Query Frame = 1
BLAST of CmaCh04G028200 vs. TrEMBL
Match: A0A0D2NPE3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G176900 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 4.9e-37 Identity = 87/178 (48.88%), Postives = 108/178 (60.67%), Query Frame = 1
BLAST of CmaCh04G028200 vs. TAIR10
Match: AT1G23170.2 (AT1G23170.2 Protein of unknown function DUF2359, transmembrane) HSP 1 Score: 151.0 bits (380), Expect = 5.7e-37 Identity = 83/176 (47.16%), Postives = 103/176 (58.52%), Query Frame = 1
BLAST of CmaCh04G028200 vs. TAIR10
Match: AT1G70770.1 (AT1G70770.1 Protein of unknown function DUF2359, transmembrane) HSP 1 Score: 126.3 bits (316), Expect = 1.5e-29 Identity = 61/95 (64.21%), Postives = 77/95 (81.05%), Query Frame = 1
BLAST of CmaCh04G028200 vs. TAIR10
Match: AT3G11880.1 (AT3G11880.1 Protein of unknown function DUF2359, transmembrane) HSP 1 Score: 111.3 bits (277), Expect = 5.0e-25 Identity = 55/94 (58.51%), Postives = 71/94 (75.53%), Query Frame = 1
BLAST of CmaCh04G028200 vs. NCBI nr
Match: gi|659129468|ref|XP_008464702.1| (PREDICTED: uncharacterized protein LOC103502522 [Cucumis melo]) HSP 1 Score: 208.4 bits (529), Expect = 8.5e-51 Identity = 115/179 (64.25%), Postives = 122/179 (68.16%), Query Frame = 1
BLAST of CmaCh04G028200 vs. NCBI nr
Match: gi|449449042|ref|XP_004142274.1| (PREDICTED: uncharacterized protein LOC101205264 [Cucumis sativus]) HSP 1 Score: 205.7 bits (522), Expect = 5.5e-50 Identity = 113/179 (63.13%), Postives = 120/179 (67.04%), Query Frame = 1
BLAST of CmaCh04G028200 vs. NCBI nr
Match: gi|1021499616|ref|XP_016193081.1| (PREDICTED: uncharacterized protein LOC107634013 [Arachis ipaensis]) HSP 1 Score: 171.4 bits (433), Expect = 1.1e-39 Identity = 84/136 (61.76%), Postives = 106/136 (77.94%), Query Frame = 1
BLAST of CmaCh04G028200 vs. NCBI nr
Match: gi|719962160|ref|XP_010265344.1| (PREDICTED: transmembrane protein 214-like [Nelumbo nucifera]) HSP 1 Score: 169.5 bits (428), Expect = 4.4e-39 Identity = 89/179 (49.72%), Postives = 109/179 (60.89%), Query Frame = 1
BLAST of CmaCh04G028200 vs. NCBI nr
Match: gi|920679400|gb|KOM26297.1| (hypothetical protein LR48_Vigan252s000900 [Vigna angularis]) HSP 1 Score: 166.4 bits (420), Expect = 3.7e-38 Identity = 90/156 (57.69%), Postives = 105/156 (67.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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