CmaCh04G026410 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G026410
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	CASP-like protein
Location	Cma_Chr04 : 18001845 .. 18002686 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAAGGGTGGAAGGAGGAGATGGAAGGGTCAAAGGGCTCAAGAATTGCTTCACTTATCCTGAGAATCCTGACCTTCATTTTGATCTTCATTTCTCTCCTAATCAACGCCACAAATTCCAAAACTTTGAACAAAGGCGCTGAAAATGAAACAAAATTTAAGTTCAAAGATGTTTATTCCTATCGGTAAGTGTGTTCTTAAATATGGTTTTTCTTTTAGAATTCTCAGCAACTTTTGATTCAATGTGGTTCTGTTTATGTACAGATATTTGATATCAACCACTATTATTGGAGCTGTTTTGAGTCTACTTCAAATTGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTCCTCTTCGATATGTTCAGCGACAAGGTAAGTATAATGATATTTGTTTAAGCTTTCGAGATTTAAGGATGTTTGATGTCATGTTGTGTCATGTTATGTAGCTGTTGTCGTATCTTCTACTGTCGGGGGCCTCGGCGGGGTTAGGCGCTGGCATCGATTTGAGAGTAGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTGGACAAGGGAAATGCTTCGGCAGCCGTTCTTCTCCTCGCTTTCATTTGTGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCTTGAAAATATAGTGTTGGTCTTCCATATTTGCTTTGTATTGATAATATAGTTTTTAATATTTGTTTAACAAAAAATAGGAACAATCTCATATTATAAATTATGAATTATTTTTCCTTTTTTTAAGAGTGCGATTTTACATTTTCGTTTGCTTATTGGGCTTTTTCTACATAACCCAATAAC

mRNA sequence

TAGAAGGGTGGAAGGAGGAGATGGAAGGGTCAAAGGGCTCAAGAATTGCTTCACTTATCCTGAGAATCCTGACCTTCATTTTGATCTTCATTTCTCTCCTAATCAACGCCACAAATTCCAAAACTTTGAACAAAGGCGCTGAAAATGAAACAAAATTTAAGTTCAAAGATGTTTATTCCTATCGATATTTGATATCAACCACTATTATTGGAGCTGTTTTGAGTCTACTTCAAATTGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTCCTCTTCGATATGTTCAGCGACAAGCTGTTGTCGTATCTTCTACTGTCGGGGGCCTCGGCGGGGTTAGGCGCTGGCATCGATTTGAGAGTAGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTGGACAAGGGAAATGCTTCGGCAGCCGTTCTTCTCCTCGCTTTCATTTGTGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCTTGAAAATATAGTGTTGGTCTTCCATATTTGCTTTGTATTGATAATATAGTTTTTAATATTTGTTTAACAAAAAATAGGAACAATCTCATATTATAAATTATGAATTATTTTTCCTTTTTTTAAGAGTGCGATTTTACATTTTCGTTTGCTTATTGGGCTTTTTCTACATAACCCAATAAC

Coding sequence (CDS)

ATGGAAGGGTCAAAGGGCTCAAGAATTGCTTCACTTATCCTGAGAATCCTGACCTTCATTTTGATCTTCATTTCTCTCCTAATCAACGCCACAAATTCCAAAACTTTGAACAAAGGCGCTGAAAATGAAACAAAATTTAAGTTCAAAGATGTTTATTCCTATCGATATTTGATATCAACCACTATTATTGGAGCTGTTTTGAGTCTACTTCAAATTGCTCTCAACATTTACAACGTCGTTACCAAAAGCCATCGAACTCTCCTCTTCGATATGTTCAGCGACAAGCTGTTGTCGTATCTTCTACTGTCGGGGGCCTCGGCGGGGTTAGGCGCTGGCATCGATTTGAGAGTAGGTCTTAAAGAGCTGGTTGGCAACCTTTTAAACTCGTTTTTGGACAAGGGAAATGCTTCGGCAGCCGTTCTTCTCCTCGCTTTCATTTGTGCTGCCGTTGTCTCAATTCTCTCTTCCTTGGCCCTCATCAGGAAGCCTTGA

Protein sequence

MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP

Homology

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BLAST of CmaCh04G026410 vs. Swiss-Prot
Match: CSPLC_SOYBN (CASP-like protein 4D1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-25
Identity = 75/165 (45.45%), Postives = 109/165 (66.06%), Query Frame = 1


Query: 4   SKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTII 63
           S GSR   L+LR+LTF+ + I+L++ A   +T +   E   + KF D+Y+YRY+IST II
Sbjct: 14  STGSRTVLLLLRVLTFVFLLIALILIAIVKQTDD---ETGVEIKFNDIYAYRYMISTIII 73

Query: 64  GAVLSLLQIALNIYNVVTKSHRTL------LFDMFSDKLLSYLLLSGASAGLGAGIDLRV 123
           G   +LLQ+AL+I+ VV+  +R L      LFD F DK++SYLL+SG++AG G  ++L  
Sbjct: 74  GFAYNLLQMALSIFTVVS-GNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELGR 133

Query: 124 GLKELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
           G+        NSF+DK NASA++LL+AF+  AV S  +S AL +K
Sbjct: 134 GVPS------NSFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of CmaCh04G026410 vs. Swiss-Prot
Match: CSPLE_RICCO (CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.6e-24
Identity = 71/161 (44.10%), Postives = 104/161 (64.60%), Query Frame = 1


Query: 4   SKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTII 63
           S  SR+A+LILRILTFI +  SL+I  TN+ TL      E K  FKDVY+YRY+++T +I
Sbjct: 7   SLASRMAALILRILTFIFLIASLVILTTNTATLELDLV-EVKVHFKDVYAYRYMLATIVI 66

Query: 64  GAVLSLLQIALNIYNVVTKSHR-----TLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVG 123
           G   ++LQIA  +Y V T +        L FD F DK++SY+L++GA+AG  +  D++  
Sbjct: 67  GLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPV 126

Query: 124 LKELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLAL 160
                    ++F++KG ASA++LL+ F+C AV+S+ SS AL
Sbjct: 127 FSG--SGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of CmaCh04G026410 vs. Swiss-Prot
Match: CSPLL_POPTR (CASP-like protein 4D1 OS=Populus trichocarpa GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 4.2e-22
Identity = 66/162 (40.74%), Postives = 102/162 (62.96%), Query Frame = 1


Query: 7   SRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTIIGAV 66
           SR+ +L LR+LTF  + +SL+I  TN+ T+  G + E K + KD YSYRY+++    G  
Sbjct: 19  SRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGID-EFKVRSKDFYSYRYMLAAIAFGLT 78

Query: 67  LSLLQIALNIYNVV------TKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 126
            ++LQIAL + ++       T     L+FD + DK++SY+L +GA+A  GA  +L+  L 
Sbjct: 79  YTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKELKTQLA 138

Query: 127 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
            L G+    F +KG ASA++LLL F+C A++S+ SS AL +K
Sbjct: 139 GLGGD---KFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of CmaCh04G026410 vs. Swiss-Prot
Match: CSPLL_ARALL (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903204 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-19
Identity = 61/161 (37.89%), Postives = 102/161 (63.35%), Query Frame = 1


Query: 8   RIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTIIGAVL 67
           +++ L+LR+LT + + I+L+I +TNS T+     +  KF FKDVY+YRY++S  +IG + 
Sbjct: 14  KVSLLLLRVLTGVFLVIALIILSTNSVTIVSQG-SALKFHFKDVYAYRYMLSAAVIGLLY 73

Query: 68  SLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVG- 127
           +++Q+   I    T  K+      D + DKL+SYL+ +G++AG G   DL+     LV  
Sbjct: 74  AVIQLFFTISEFATGMKNPFNYQLDFYGDKLISYLVATGSAAGFGVSKDLKDAFIALVAL 133

Query: 128 ---NLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
              + ++ F  +G ASA++LL +FIC AV+S+ SSLA+ ++
Sbjct: 134 DSTDPVDKFFSRGYASASLLLFSFICLAVLSVFSSLAIAKR 173

[Close]

BLAST of CmaCh04G026410 vs. Swiss-Prot
Match: CSPLB_ARATH (CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-19
Identity = 63/161 (39.13%), Postives = 100/161 (62.11%), Query Frame = 1


Query: 8   RIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTIIGAVL 67
           ++  L+LR+LT + + I+L+I +TNS T+     +  KF FKDVY+YRY++S  +IG V 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQG-SALKFHFKDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVG- 127
           +++Q+   I    T  K+      D + DKL+SYL+ +G++AG G   DL+     LV  
Sbjct: 74  AVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVAL 133

Query: 128 ---NLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
              + ++ F  KG ASA++LL AFIC AV+S+ SS A+ ++
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of CmaCh04G026410 vs. TrEMBL
Match: A0A0A0KS88_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515020 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.2e-45
Identity = 109/161 (67.70%), Postives = 131/161 (81.37%), Query Frame = 1


Query: 4   SKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTII 63
           SKG RIAS+ILRILTFI IFISLLI ATN+KT+ K   NE K KF DV SYRY+++ T+I
Sbjct: 3   SKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAATVI 62

Query: 64  GAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELV 123
           G  L LLQIA NIY++VTK+  T LF MFSD+LL+YLLLS ASAGLG+GIDLR  +K LV
Sbjct: 63  GGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVLV 122

Query: 124 -GNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
            G+  +SF DKGNA +A+L LAFIC+A+VS+LSSLALI+KP
Sbjct: 123 DGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 163

[Close]

BLAST of CmaCh04G026410 vs. TrEMBL
Match: A0A0A0KNU7_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515030 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.1e-44
Identity = 111/160 (69.38%), Postives = 127/160 (79.38%), Query Frame = 1


Query: 4   SKGSRIASLILRILTFILIFISLLINATNSKT-LNKGAENETKFKFKDVYSYRYLISTTI 63
           SKG RIASLILR LTFIL FISLLI ATNSKT L  G   E K KF +V SYRYL++T +
Sbjct: 3   SKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATAV 62

Query: 64  IGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKEL 123
           IG  LSLLQI  NIY+++T    T LF MFSD+LL+YLLLSGASAGLGAGIDLRV +KEL
Sbjct: 63  IGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKEL 122

Query: 124 V-GNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIR 162
           + G   NSF DK NA +A+LLLAF+CAA+VS+LSSLALIR
Sbjct: 123 LEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162

[Close]

BLAST of CmaCh04G026410 vs. TrEMBL
Match: A0A0A0KU83_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_5G515010 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-28
Identity = 80/162 (49.38%), Postives = 106/162 (65.43%), Query Frame = 1


Query: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60
           ME S GSRI SLILRILTF+ +FIS  I  T S+T+        K  F D + +RY+++T
Sbjct: 1   MENSSGSRITSLILRILTFVFLFISFFILITTSQTVRP-----YKLHFNDYHGFRYMLAT 60

Query: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120
            IIG V +LLQIA +++N+V     T+LFD F DK LSYLL +GA+AG G G+DL+   K
Sbjct: 61  IIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLK---K 120

Query: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
               +L   F DK  A++ +LL AF C+A VSILSS AL ++
Sbjct: 121 VDPDDLFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of CmaCh04G026410 vs. TrEMBL
Match: W9SGV0_9ROSA (CASP-like protein OS=Morus notabilis GN=L484_009956 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 9.1e-24
Identity = 71/158 (44.94%), Postives = 106/158 (67.09%), Query Frame = 1


Query: 7   SRIASLILRILTFILIFISLLINATNSKTLNKGAE--NETKFKFKDVYSYRYLISTTIIG 66
           S I +L+LR+  F+L+ ISL++  TN+ T  KG +   E  F+F+DV +YRY++S+ +IG
Sbjct: 7   SCIVNLVLRVFVFVLLLISLILICTNTTTA-KGTDVFAEQDFRFQDVIAYRYMLSSIVIG 66

Query: 67  AVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVG 126
               LLQ+A  IYNV+ KS   LLFD + DK++SY+L +GA++G G   D+++   +L  
Sbjct: 67  TAFVLLQLAFTIYNVIAKSEGNLLFDFYGDKIMSYVLATGAASGFGVTNDMQMLFNKLNI 126

Query: 127 NLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
            L + F  K  ASA++LLLA +C AV+S+ SS ALI K
Sbjct: 127 FLGDDFYAKSYASASLLLLATVCTAVLSVFSSYALIPK 163

[Close]

BLAST of CmaCh04G026410 vs. TrEMBL
Match: M5X682_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa024507mg PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-23
Identity = 70/161 (43.48%), Postives = 109/161 (67.70%), Query Frame = 1


Query: 2   EGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTT 61
           + +  SRIASLILRILTFIL+ ISL++ ATN+      +++++K +F D Y+YRY+++T 
Sbjct: 4   QATASSRIASLILRILTFILLLISLIVLATNTIG---SSDDDSKVRFTDFYAYRYMLATI 63

Query: 62  IIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKE 121
           +IG   SLLQ+ L I+N+V         D F DK +SY+L +GA+AG G  +DL+  +  
Sbjct: 64  VIGNAYSLLQLVLTIFNIVRGGDGMPFLDFFGDKFISYVLATGAAAGFGLTVDLKRLMDA 123

Query: 122 LVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
              ++LN F DK  ASA++LLLAF+  A++S++S+  L ++
Sbjct: 124 SEVDMLN-FDDKAFASASLLLLAFVTTAILSVISAYTLPKR 160

[Close]

BLAST of CmaCh04G026410 vs. TAIR10
Match: AT2G39518.1 (AT2G39518.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 97.8 bits (242), Expect = 6.4e-21
Identity = 63/161 (39.13%), Postives = 100/161 (62.11%), Query Frame = 1


Query: 8   RIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTIIGAVL 67
           ++  L+LR+LT + + I+L+I +TNS T+     +  KF FKDVY+YRY++S  +IG V 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQG-SALKFHFKDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALNIYNVVT--KSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVG- 127
           +++Q+   I    T  K+      D + DKL+SYL+ +G++AG G   DL+     LV  
Sbjct: 74  AVIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVAL 133

Query: 128 ---NLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
              + ++ F  KG ASA++LL AFIC AV+S+ SS A+ ++
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of CmaCh04G026410 vs. TAIR10
Match: AT2G39530.1 (AT2G39530.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 95.9 bits (237), Expect = 2.4e-20
Identity = 64/162 (39.51%), Postives = 102/162 (62.96%), Query Frame = 1


Query: 8   RIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTIIGAVL 67
           R   L+LR+LT   + I++++ +TN+ TL   + +  K  F DVY+YRY++S  +IG V 
Sbjct: 14  RTVLLLLRVLTAAFLLITVVLISTNTVTLEISSTS-IKLPFNDVYAYRYMLSAAVIGLVY 73

Query: 68  SLLQIALNIYNVVT-KSHR-TLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELVG- 127
           +++Q+ L I    T K+H  T  FD + DK++SYLL +G++AG G   DL+     L+  
Sbjct: 74  AVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEF 133

Query: 128 ---NLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
              + ++ F  KG ASA++LL AF+  AV+S+ SSLAL ++P
Sbjct: 134 DSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of CmaCh04G026410 vs. NCBI nr
Match: gi|449450002|ref|XP_004142753.1| (PREDICTED: CASP-like protein 4D1 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 4.6e-45
Identity = 109/161 (67.70%), Postives = 131/161 (81.37%), Query Frame = 1


Query: 4   SKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTII 63
           SKG RIAS+ILRILTFI IFISLLI ATN+KT+ K   NE K KF DV SYRY+++ T+I
Sbjct: 3   SKGLRIASVILRILTFIFIFISLLIVATNTKTVYKYTVNEHKVKFSDVNSYRYVVAATVI 62

Query: 64  GAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELV 123
           G  L LLQIA NIY++VTK+  T LF MFSD+LL+YLLLS ASAGLG+GIDLR  +K LV
Sbjct: 63  GGALCLLQIAFNIYHLVTKAEGTPLFYMFSDQLLTYLLLSAASAGLGSGIDLRANIKVLV 122

Query: 124 -GNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
            G+  +SF DKGNA +A+L LAFIC+A+VS+LSSLALI+KP
Sbjct: 123 DGDDYSSFFDKGNAGSAILFLAFICSAIVSVLSSLALIKKP 163

[Close]

BLAST of CmaCh04G026410 vs. NCBI nr
Match: gi|659117983|ref|XP_008458889.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 187.2 bits (474), Expect = 2.3e-44
Identity = 109/161 (67.70%), Postives = 129/161 (80.12%), Query Frame = 1


Query: 4   SKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLISTTII 63
           SKG RIASLILRILTFI IFISLLI ATNSKT  KG  +E K KF +V SYRYL++T +I
Sbjct: 3   SKGLRIASLILRILTFIFIFISLLIVATNSKTAFKGTVSEIKVKFDNVTSYRYLLATAVI 62

Query: 64  GAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKELV 123
           G  LSLLQI  NIY++VT    T LF + SD+LL+YLLLSGASAG GAGIDL+V +KEL+
Sbjct: 63  GGALSLLQIIFNIYHLVTNREGTPLFYIISDQLLAYLLLSGASAGFGAGIDLKVNIKELL 122

Query: 124 -GNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
             N  +SF ++GNA +A+LLLAFICAA+VS+LSSLALIR P
Sbjct: 123 ESNYYDSFFNEGNAGSAILLLAFICAAIVSLLSSLALIRNP 163

[Close]

BLAST of CmaCh04G026410 vs. NCBI nr
Match: gi|700196121|gb|KGN51298.1| (hypothetical protein Csa_5G515030 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 3.0e-44
Identity = 111/160 (69.38%), Postives = 127/160 (79.38%), Query Frame = 1


Query: 4   SKGSRIASLILRILTFILIFISLLINATNSKT-LNKGAENETKFKFKDVYSYRYLISTTI 63
           SKG RIASLILR LTFIL FISLLI ATNSKT L  G   E K KF +V SYRYL++T +
Sbjct: 3   SKGLRIASLILRNLTFILTFISLLIVATNSKTVLIDGTVGEVKVKFNNVASYRYLVATAV 62

Query: 64  IGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLKEL 123
           IG  LSLLQI  NIY+++T    T LF MFSD+LL+YLLLSGASAGLGAGIDLRV +KEL
Sbjct: 63  IGGALSLLQIVFNIYHLITNGEGTPLFYMFSDQLLTYLLLSGASAGLGAGIDLRVNIKEL 122

Query: 124 V-GNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIR 162
           + G   NSF DK NA +A+LLLAF+CAA+VS+LSSLALIR
Sbjct: 123 LEGTYFNSFFDKANAGSAILLLAFVCAAIVSVLSSLALIR 162

[Close]

BLAST of CmaCh04G026410 vs. NCBI nr
Match: gi|659117979|ref|XP_008458887.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 147.5 bits (371), Expect = 2.0e-32
Identity = 79/163 (48.47%), Postives = 118/163 (72.39%), Query Frame = 1


Query: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60
           ME    ++IAS +LR+LTF+ + +S+++  TNSKT+        +  F +V SYRY ++T
Sbjct: 1   MEAKMATKIASFVLRVLTFVFLLVSIIVLGTNSKTIGND-----EVHFHNVNSYRYAMAT 60

Query: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120
            IIG   +LLQIAL +Y +VTK+  ++LFD + DK+LSY LL+GA+A LG+ +DL+  + 
Sbjct: 61  IIIGGAFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANM- 120

Query: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRKP 164
               ++LNSF D+GNA+AA+LLLAF+C+A++S+LSSLAL  KP
Sbjct: 121 ----DMLNSFFDQGNAAAALLLLAFLCSAIISVLSSLALSNKP 153

[Close]

BLAST of CmaCh04G026410 vs. NCBI nr
Match: gi|659117986|ref|XP_008458890.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 135.6 bits (340), Expect = 7.9e-29
Identity = 79/162 (48.77%), Postives = 108/162 (66.67%), Query Frame = 1


Query: 1   MEGSKGSRIASLILRILTFILIFISLLINATNSKTLNKGAENETKFKFKDVYSYRYLIST 60
           ME S GSR+ SLILRILTF+ +FIS  I  T S+T+        K  F   + +RY+++T
Sbjct: 1   MENSSGSRVTSLILRILTFVFLFISFFILITTSQTVRP-----YKLHFNSYHGFRYMLAT 60

Query: 61  TIIGAVLSLLQIALNIYNVVTKSHRTLLFDMFSDKLLSYLLLSGASAGLGAGIDLRVGLK 120
            IIG V +LLQIA +++N+V     T+LFD F DK LSYLL +GA+AG G G+DL+   K
Sbjct: 61  IIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLK---K 120

Query: 121 ELVGNLLNSFLDKGNASAAVLLLAFICAAVVSILSSLALIRK 163
           +   +L  +F DK  A++A+LL AF C+A VSILSS AL ++
Sbjct: 121 KDPDDLFRTFFDKAYAASALLLFAFFCSAAVSILSSFALSKR 154

The following BLAST results are available for this feature:

BLAST of CmaCh04G026410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSPLC_SOYBN	1.8e-25	45.45	CASP-like protein 4D1 OS=Glycine max PE=2 SV=1	[more]
CSPLE_RICCO	2.6e-24	44.10	CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1	[more]
CSPLL_POPTR	4.2e-22	40.74	CASP-like protein 4D1 OS=Populus trichocarpa GN=POPTR_0010s21230g PE=2 SV=2	[more]
CSPLL_ARALL	1.1e-19	37.89	CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903204 P...	[more]
CSPLB_ARATH	1.1e-19	39.13	CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1	[more]

BLAST of CmaCh04G026410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS88_CUCSA	3.2e-45	67.70	CASP-like protein OS=Cucumis sativus GN=Csa_5G515020 PE=3 SV=1	[more]
A0A0A0KNU7_CUCSA	2.1e-44	69.38	CASP-like protein OS=Cucumis sativus GN=Csa_5G515030 PE=3 SV=1	[more]
A0A0A0KU83_CUCSA	1.2e-28	49.38	CASP-like protein OS=Cucumis sativus GN=Csa_5G515010 PE=3 SV=1	[more]
W9SGV0_9ROSA	9.1e-24	44.94	CASP-like protein OS=Morus notabilis GN=L484_009956 PE=3 SV=1	[more]
M5X682_PRUPE	1.6e-23	43.48	CASP-like protein OS=Prunus persica GN=PRUPE_ppa024507mg PE=3 SV=1	[more]

BLAST of CmaCh04G026410 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39518.1	6.4e-21	39.13	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	2.4e-20	39.51	Uncharacterised protein family (UPF0497)	[more]

BLAST of CmaCh04G026410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450002\|ref\|XP_004142753.1\|	4.6e-45	67.70	PREDICTED: CASP-like protein 4D1 [Cucumis sativus]	[more]
gi\|659117983\|ref\|XP_008458889.1\|	2.3e-44	67.70	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]
gi\|700196121\|gb\|KGN51298.1\|	3.0e-44	69.38	hypothetical protein Csa_5G515030 [Cucumis sativus]	[more]
gi\|659117979\|ref\|XP_008458887.1\|	2.0e-32	48.47	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]
gi\|659117986\|ref\|XP_008458890.1\|	7.9e-29	48.77	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0002229	defense response to oomycetes
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009409	response to cold
biological_process	GO:0009723	response to ethylene
biological_process	GO:0009753	response to jasmonic acid
biological_process	GO:0009751	response to salicylic acid
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009611	response to wounding
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G026410.1	CmaCh04G026410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 6..147 score: 2.2
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 7..162 score: 1.0
None	No IPR available	PANTHER	PTHR11615:SF148	SUBFAMILY NOT NAMED	coord: 7..162 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G026410	Cp4.1LG13g09490	Cucurbita pepo (Zucchini)	cmacpeB705
CmaCh04G026410	CsGy5G017250	Cucumber (Gy14) v2	cgybcmaB668

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G026410	CmaCh15G003960	Cucurbita maxima (Rimu)	cmacmaB324

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G026410	Cucurbita maxima (Rimu)	cmacmaB545
CmaCh04G026410	Cucumber (Gy14) v1	cgycmaB0543
CmaCh04G026410	Cucurbita moschata (Rifu)	cmacmoB692
CmaCh04G026410	Cucurbita moschata (Rifu)	cmacmoB729
CmaCh04G026410	Cucurbita moschata (Rifu)	cmacmoB752
CmaCh04G026410	Wild cucumber (PI 183967)	cmacpiB732
CmaCh04G026410	Cucumber (Chinese Long) v2	cmacuB725
CmaCh04G026410	Melon (DHL92) v3.5.1	cmameB634
CmaCh04G026410	Watermelon (Charleston Gray)	cmawcgB608
CmaCh04G026410	Watermelon (97103) v1	cmawmB652
CmaCh04G026410	Cucurbita pepo (Zucchini)	cmacpeB721
CmaCh04G026410	Bottle gourd (USVL1VR-Ls)	cmalsiB638
CmaCh04G026410	Bottle gourd (USVL1VR-Ls)	cmalsiB651
CmaCh04G026410	Cucumber (Gy14) v2	cgybcmaB546
CmaCh04G026410	Cucumber (Gy14) v2	cgybcmaB649
CmaCh04G026410	Melon (DHL92) v3.6.1	cmamedB720
CmaCh04G026410	Melon (DHL92) v3.6.1	cmamedB799
CmaCh04G026410	Silver-seed gourd	carcmaB0374
CmaCh04G026410	Silver-seed gourd	carcmaB0967
CmaCh04G026410	Cucumber (Chinese Long) v3	cmacucB0846
CmaCh04G026410	Cucumber (Chinese Long) v3	cmacucB0862
CmaCh04G026410	Watermelon (97103) v2	cmawmbB756
CmaCh04G026410	Watermelon (97103) v2	cmawmbB797
CmaCh04G026410	Wax gourd	cmawgoB0877