CmaCh04G020200 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G020200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Location	Cma_Chr04 : 12807367 .. 12809221 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACACTTTCATGTTCCTCCTCGTCCTAACCAACGCTCAAAACGCCCCAGGTGACTACCTCGTGCTTCACAACCGCGCTCGAGCCCAGGTCGACGTCAACCCCATGCAATGGAGCAATACTGTGGCCGCGTACGCTATGGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAATCGGGCCGTACGGGGAAAACATAGCTGCGGGCTACTACCCTGAGTTCACTGGGGCGGATGCGGTGAAGCTATGGGCGAACGAGAAGTCGCTGTATGATCATGCGTCGAATAAATGCATGGGTGGTGAATGTGGGCACTACACTTAGATGGTGTGGCGAAGCTCGGTCCAGCTTGGATGTGCTAGAGTGCCCTGTAAGGCTAATTCTCAGTTTGTTGTTTGCAATTACGATCCTCCTGGCAACTATATTGGGGAAAGGCCTTATGATTCTTGGGTGGTTCGAAGAGATTTGGTTTTAAAAATTTTATGAATAGTATTATATTGTCCGGTTTAAGTGAACTCTTGTGACTTTGTTTTGACCGCCTTAAGTTAACTCTTGTGACTTTGTTATGATCTCCTTCCTCGTAAACCCATGATCATAGAGTCTCCCCTCTAATTAAGTACATCACAGAGCCACCCTGAAGCTCGTAGATTTCTAGAACAACCTTCCCTTAATCGAGGCTCGACATAGCTAAGTTAAGTTGATTTTCTATTCTTCTTTGGAGCCTTTGAACAAAATACACCATTTGTTCGACACTTTTGACTACAAATTTGAGGCTAACAATTTCTTTGTTTGACATAGCTAAGTTAAGTTGATTTTCTATTCTTCTTATGATTCTCTGTTATATAATCCATCATAAAATTTTTGGGTTCAATTAATTCATTTCATTTACTCAAAATTTTAAGTAAAATATTAACATTATTTATTTATTTTCAAACCTTTAGTTAATAAAACAATAAATATATACGTGCATGAATACCTAAATGGTGAGTAAAAATGTATCTTAAATTTTAAGATTAACCTCTATGTGGATTAAGTTTTATTAATCCTAAAAAAAATTCATGCTAAATCTAGAAAATTTTCATTCATTTAACTTAATTCAAACAAAAATCTAGCCTAACTAAACATGGAAGCCGGAATGCATTGTTGAATTTCATAGCATGGCATAATTAGTTCATAATTCATTGTTTTCCCATCGCATTCATTTCATTCATTTGAACCTAATTCAAACAAAAATCTAGCCTAACTAAACATGGAAGCCGGAATGCATTGTTGAATTTCATAGCATGGCATAATTAGTTCATAATTCATTGTTTTCCCATCGCATTCATTTCATTCATTTGAACCTAATTCAAACAAAAATCTAGCCTAACTAAACATGGAAGCCGGAATGCATTGTTGAATTTCATAGCATGGCATAATTAGTTCATAATTCATTGTTTTCCCATCGCATTCATTTCATTCATTTGAACCTAATTCAAAAAAAAATCTAGCCTAACTAAACATGGAAGCCCGAATGCATTGTTGAATTTTCGAGCATGGCATAATTAGTTCATAATTCATTGTTTTCCAATCGCATTCCATATTAAGTTTTCCATCTCTATATAAATCCTTCCCTTATTCTCAATTTTCATCTCATCTCTCATCGAAATTATGTGGACTCAAACCCCTCCGATCATGGCTGCTTTCAGTTGCCACTTTCATGTTCCTCCTTGCCCTAACCAACGCTCAAAACGCCCCCCGTGACTTCCTCGCGCTTCACAATCGCGCTCGAGCCCAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACCGTGACCGCATACGCTCAAGCCTATGTCGAAAAATGA

mRNA sequence

ATGGACACTTTCATGTTCCTCCTCGTCCTAACCAACGCTCAAAACGCCCCAGGTGACTACCTCGTGCTTCACAACCGCGCTCGAGCCCAGGTCGACGTCAACCCCATGCAATGGAGCAATACTGTGGCCGCGTACGCTATGGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAATCGGGCCGTACGGGGAAAACATAGCTGCGGGCTACTACCCTGAGTTCACTGGGGCGGATGCGGTGAAGCTATGGGCGAACGAGAAGTCGCTGTATGATCATGCGTCGAATAAATGCATGGGTGTTGCCACTTTCATGTTCCTCCTTGCCCTAACCAACGCTCAAAACGCCCCCCGTGACTTCCTCGCGCTTCACAATCGCGCTCGAGCCCAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACCGTGACCGCATACGCTCAAGCCTATGTCGAAAAATGA

Coding sequence (CDS)

ATGGACACTTTCATGTTCCTCCTCGTCCTAACCAACGCTCAAAACGCCCCAGGTGACTACCTCGTGCTTCACAACCGCGCTCGAGCCCAGGTCGACGTCAACCCCATGCAATGGAGCAATACTGTGGCCGCGTACGCTATGGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAATCGGGCCGTACGGGGAAAACATAGCTGCGGGCTACTACCCTGAGTTCACTGGGGCGGATGCGGTGAAGCTATGGGCGAACGAGAAGTCGCTGTATGATCATGCGTCGAATAAATGCATGGGTGTTGCCACTTTCATGTTCCTCCTTGCCCTAACCAACGCTCAAAACGCCCCCCGTGACTTCCTCGCGCTTCACAATCGCGCTCGAGCCCAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACCGTGACCGCATACGCTCAAGCCTATGTCGAAAAATGA

Protein sequence

MDTFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMGVATFMFLLALTNAQNAPRDFLALHNRARAQVGVGPMQWSNTVTAYAQAYVEK

Homology

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BLAST of CmaCh04G020200 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 7.0e-27
Identity = 57/101 (56.44%), Postives = 69/101 (68.32%), Query Frame = 1


Query: 3   TFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHS 62
           TF  L+  + AQN+P DYL  HN AR QV V PM W N +AAYA  YA +R GDC MIHS
Sbjct: 13  TFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHS 72

Query: 63  IGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
            GPYGEN+AA  +P+   A AVK+W +EK  YD+ SN C+G
Sbjct: 73  HGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVG 112

[Close]

BLAST of CmaCh04G020200 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.6e-23
Identity = 50/98 (51.02%), Postives = 71/98 (72.45%), Query Frame = 1


Query: 7   LLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSIGPY 66
           L++ + AQ++P DYL +HN+AR  V V PMQW   VAAYA +YAE+ +G+C +IHS GPY
Sbjct: 20  LVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPY 79

Query: 67  GENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMGV 105
           GEN+A G   + +G  AV +W +EK+ Y++A+N C GV
Sbjct: 80  GENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTCNGV 116

[Close]

BLAST of CmaCh04G020200 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-21
Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 1


Query: 7   LLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSIGPY 66
           L+V   AQ++  DY+  HN+AR+Q+ V PMQW   +AAYA  YA + KGDC ++HS GPY
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPY 79

Query: 67  GENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMGV 105
           GEN+A     + +G  AV LW NEK+ Y++ +N C GV
Sbjct: 80  GENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTCNGV 116

[Close]

BLAST of CmaCh04G020200 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.8e-21
Identity = 49/104 (47.12%), Postives = 64/104 (61.54%), Query Frame = 1


Query: 1   MDTFMFLLVLTN---AQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDC 60
           + T +  LV+++   AQN+  DYL  HN ARA V V P+ W + VAAYA  YA +   DC
Sbjct: 15  VSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADC 74

Query: 61  AMIHSIGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKC 102
            ++HS G YGEN+A G     T A AV++W +EK  YDH SN C
Sbjct: 75  NLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTC 118

[Close]

BLAST of CmaCh04G020200 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.5e-21
Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 1


Query: 4   FMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSI 63
           F+ +   ++AQN+  DYL  HN ARA V V P+ W N VAAYA  Y  +   DC ++HS 
Sbjct: 21  FLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSH 80

Query: 64  GPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKC 102
           G YGEN+A G     T A AV++W +EK  YDH SN C
Sbjct: 81  GQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTC 118

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BLAST of CmaCh04G020200 vs. TrEMBL
Match: A0A0A0KHP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.6e-36
Identity = 71/99 (71.72%), Postives = 80/99 (80.81%), Query Frame = 1


Query: 5   MFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSIG 64
           MFL VLT+AQN+P DY+ LHN+ARA V V PM W NTVAAYA +YA KRK DCA++HS G
Sbjct: 1   MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 65  PYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
           PYGENIA G+YPEFTGAD VKLW  EK LYD+ASN C G
Sbjct: 61  PYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKG 99

[Close]

BLAST of CmaCh04G020200 vs. TrEMBL
Match: A0A0A0LLX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.4e-36
Identity = 71/100 (71.00%), Postives = 79/100 (79.00%), Query Frame = 1


Query: 4   FMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSI 63
           F F   LT+AQNAP DY+ LHN+ARA V V PM W+NTVAAYA +YA KRK DCA+IHS 
Sbjct: 8   FTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKNDCALIHST 67

Query: 64  GPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
           GPYGENIA GYYPEFTGAD VK+W  EK LYD+ASN C G
Sbjct: 68  GPYGENIAVGYYPEFTGADGVKMWVGEKHLYDYASNSCKG 107

[Close]

BLAST of CmaCh04G020200 vs. TrEMBL
Match: A0A0A0LSG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.2e-35
Identity = 70/101 (69.31%), Postives = 78/101 (77.23%), Query Frame = 1


Query: 3   TFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHS 62
           TF FL  LT AQ +P DY+ LHN+ARA V V PM W+ TVAAYA +YA KRK DCA++HS
Sbjct: 7   TFTFLFFLTQAQKSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKNDCALVHS 66

Query: 63  IGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
            GPYGENIA GYYPEFTGAD VKLW  EK LYD+ASN C G
Sbjct: 67  TGPYGENIAVGYYPEFTGADGVKLWVGEKHLYDYASNSCKG 107

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BLAST of CmaCh04G020200 vs. TrEMBL
Match: A0A067KN70_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06940 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.3e-31
Identity = 67/141 (47.52%), Postives = 91/141 (64.54%), Query Frame = 1


Query: 15  NAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSIGPYGENIAAGY 74
           ++P DY+  HN ARA V V  + W NTV AYA  YA +  GDC ++HS GPYGEN+A   
Sbjct: 159 DSPQDYVNAHNTARAAVGVGLVTWDNTVEAYARNYANQHIGDCRLVHSAGPYGENLAWSS 218

Query: 75  YPEFTGADAVKLWANEKSLYDHASNKCMGVATFMFLLALTNAQNAPRDFLALHNRARAQV 134
             + +G DAVKLW +EK+ YD+ S+ C+       L    +AQ++P+D++  HN ARA V
Sbjct: 219 -GDLSGIDAVKLWVDEKAFYDYNSSSCVARKNLCTLTIPLHAQDSPKDYVNAHNTARAAV 278

Query: 135 GVGPMQWSNTVTAYAQAYVEK 156
           GVGP+ W NTV AYA+ Y  +
Sbjct: 279 GVGPVTWDNTVAAYARNYANQ 298

[Close]

BLAST of CmaCh04G020200 vs. TrEMBL
Match: F6HBL1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00910 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.4e-28
Identity = 74/171 (43.27%), Postives = 97/171 (56.73%), Query Frame = 1


Query: 13  AQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGD-CAMIHSIGPYGENIA 72
           AQ++P DY+  HN ARAQV V P+ W+ TVAAYA  YA  R  + C+M HS GPYGEN+A
Sbjct: 23  AQSSPQDYVDAHNAARAQVGVQPITWNETVAAYARRYASSRVAEQCSMEHSGGPYGENLA 82

Query: 73  AGYYPEFTGADAVKLWANEKSLYDH-----ASNKCMGVATFM------------------ 132
            GY    +G+DAV+ W  EK  YDH        +C+     +                  
Sbjct: 83  EGY-GSMSGSDAVEFWLTEKPNYDHNSNSCVGGECLHYTQIVWGGSLHLGCARVQCKNGW 142

Query: 133 -FLLALTN---AQNAPRDFLALHNRARAQVGVGPMQWSNTVTAYAQAYVEK 156
            F+ +L +   AQN+ +D+L  HN ARAQVGVG M W+NTV +YAQ Y  +
Sbjct: 143 WFITSLVHTSCAQNSQQDYLNAHNTARAQVGVGSMTWNNTVASYAQNYANQ 192

[Close]

BLAST of CmaCh04G020200 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 116.3 bits (290), Expect = 1.7e-26
Identity = 54/98 (55.10%), Postives = 65/98 (66.33%), Query Frame = 1


Query: 6   FLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSIGP 65
           FL+V TNAQN P DYL  HN ARAQV V  + W  T+AAYA+ Y+  RK DC ++HS GP
Sbjct: 16  FLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGP 75

Query: 66  YGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
           YGEN+A G    F+   AVKLW +EK  Y +A N C G
Sbjct: 76  YGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTG 113

[Close]

BLAST of CmaCh04G020200 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 109.4 bits (272), Expect = 2.0e-24
Identity = 50/98 (51.02%), Postives = 71/98 (72.45%), Query Frame = 1


Query: 7   LLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSIGPY 66
           L++ + AQ++P DYL +HN+AR  V V PMQW   VAAYA +YAE+ +G+C +IHS GPY
Sbjct: 20  LVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPY 79

Query: 67  GENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMGV 105
           GEN+A G   + +G  AV +W +EK+ Y++A+N C GV
Sbjct: 80  GENLAWG-SGDLSGVSAVNMWVSEKANYNYAANTCNGV 116

[Close]

BLAST of CmaCh04G020200 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 107.1 bits (266), Expect = 1.0e-23
Identity = 52/98 (53.06%), Postives = 66/98 (67.35%), Query Frame = 1


Query: 4   FMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSI 63
           F+ L+V   AQ++P D+L +HNRARA+V V P++W   VAAYA  YA +RKGDCAM HS 
Sbjct: 17  FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 64  GPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKC 102
           G YGENIA       TG  AV +W +E+  YD+ SN C
Sbjct: 77  GSYGENIAWS-SGSMTGVAAVDMWVDEQFDYDYDSNTC 113

[Close]

BLAST of CmaCh04G020200 vs. TAIR10
Match: AT1G50050.1 (AT1G50050.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 104.0 bits (258), Expect = 8.5e-23
Identity = 53/99 (53.54%), Postives = 63/99 (63.64%), Query Frame = 1


Query: 6   FLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSI-G 65
           FL++ TNAQNA  DYL  HN ARAQV V  + W   VAAYA  YA  RK DC++  S  G
Sbjct: 16  FLVLATNAQNAQQDYLNTHNTARAQVGVANVVWDTVVAAYATNYANARKVDCSLTPSTGG 75

Query: 66  PYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
            YGEN+A G    FTG  AV LW NEK  Y++ +N C+G
Sbjct: 76  SYGENLANGNNALFTGVAAVNLWVNEKPYYNYTANACIG 114

[Close]

BLAST of CmaCh04G020200 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 103.2 bits (256), Expect = 1.5e-22
Identity = 48/98 (48.98%), Postives = 66/98 (67.35%), Query Frame = 1


Query: 7   LLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSIGPY 66
           L+V   AQ++  DY+  HN+AR+Q+ V PMQW   +AAYA  YA + KGDC ++HS GPY
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPY 79

Query: 67  GENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMGV 105
           GEN+A     + +G  AV LW NEK+ Y++ +N C GV
Sbjct: 80  GENLAKS-GGDLSGVAAVNLWVNEKANYNYDTNTCNGV 116

[Close]

BLAST of CmaCh04G020200 vs. NCBI nr
Match: gi|778722387|ref|XP_011658476.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 2.0e-37
Identity = 73/101 (72.28%), Postives = 82/101 (81.19%), Query Frame = 1


Query: 3   TFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHS 62
           TFMFL VLT+AQN+P DY+ LHN+ARA V V PM W NTVAAYA +YA KRK DCA++HS
Sbjct: 7   TFMFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHS 66

Query: 63  IGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
            GPYGENIA G+YPEFTGAD VKLW  EK LYD+ASN C G
Sbjct: 67  TGPYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKG 107

[Close]

BLAST of CmaCh04G020200 vs. NCBI nr
Match: gi|700193135|gb|KGN48339.1| (hypothetical protein Csa_6G483242 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 3.7e-36
Identity = 71/99 (71.72%), Postives = 80/99 (80.81%), Query Frame = 1


Query: 5   MFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSIG 64
           MFL VLT+AQN+P DY+ LHN+ARA V V PM W NTVAAYA +YA KRK DCA++HS G
Sbjct: 1   MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 65  PYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
           PYGENIA G+YPEFTGAD VKLW  EK LYD+ASN C G
Sbjct: 61  PYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKG 99

[Close]

BLAST of CmaCh04G020200 vs. NCBI nr
Match: gi|700207816|gb|KGN62935.1| (hypothetical protein Csa_2G381130 [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 4.9e-36
Identity = 71/100 (71.00%), Postives = 79/100 (79.00%), Query Frame = 1


Query: 4   FMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHSI 63
           F F   LT+AQNAP DY+ LHN+ARA V V PM W+NTVAAYA +YA KRK DCA+IHS 
Sbjct: 8   FTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKNDCALIHST 67

Query: 64  GPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
           GPYGENIA GYYPEFTGAD VK+W  EK LYD+ASN C G
Sbjct: 68  GPYGENIAVGYYPEFTGADGVKMWVGEKHLYDYASNSCKG 107

[Close]

BLAST of CmaCh04G020200 vs. NCBI nr
Match: gi|700207817|gb|KGN62936.1| (hypothetical protein Csa_2G381380 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 3.2e-35
Identity = 70/101 (69.31%), Postives = 78/101 (77.23%), Query Frame = 1


Query: 3   TFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHS 62
           TF FL  LT AQ +P DY+ LHN+ARA V V PM W+ TVAAYA +YA KRK DCA++HS
Sbjct: 7   TFTFLFFLTQAQKSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKNDCALVHS 66

Query: 63  IGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
            GPYGENIA GYYPEFTGAD VKLW  EK LYD+ASN C G
Sbjct: 67  TGPYGENIAVGYYPEFTGADGVKLWVGEKHLYDYASNSCKG 107

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BLAST of CmaCh04G020200 vs. NCBI nr
Match: gi|659109009|ref|XP_008454501.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 154.1 bits (388), Expect = 2.0e-34
Identity = 69/101 (68.32%), Postives = 81/101 (80.20%), Query Frame = 1


Query: 3   TFMFLLVLTNAQNAPGDYLVLHNRARAQVDVNPMQWSNTVAAYAMAYAEKRKGDCAMIHS 62
           +FMFL  LT+AQN+P DY+ LHN+ARA V V PM W++T+AAYA AYA +R  DCA++HS
Sbjct: 7   SFMFLFFLTHAQNSPQDYIALHNKARAAVGVGPMTWNSTLAAYAEAYANQRIKDCALVHS 66

Query: 63  IGPYGENIAAGYYPEFTGADAVKLWANEKSLYDHASNKCMG 104
            GPYGENIA GYYPEFTGAD VKLW  EK LYD+ASN C G
Sbjct: 67  KGPYGENIAVGYYPEFTGADGVKLWVAEKRLYDYASNSCKG 107

The following BLAST results are available for this feature:

BLAST of CmaCh04G020200 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	7.0e-27	56.44	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1_ARATH	3.6e-23	51.02	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1	[more]
PRB1_ARATH	2.6e-21	48.98	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]
PR1A_TOBAC	5.8e-21	47.12	Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1	[more]
PR1B_TOBAC	7.5e-21	47.96	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]

BLAST of CmaCh04G020200 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHP4_CUCSA	2.6e-36	71.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1	[more]
A0A0A0LLX7_CUCSA	3.4e-36	71.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1	[more]
A0A0A0LSG5_CUCSA	2.2e-35	69.31	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1	[more]
A0A067KN70_JATCU	3.3e-31	47.52	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06940 PE=3 SV=1	[more]
F6HBL1_VITVI	4.4e-28	43.27	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0088g00910 PE=3 SV=...	[more]

BLAST of CmaCh04G020200 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50060.1	1.7e-26	55.10	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14610.1	2.0e-24	51.02	pathogenesis-related gene 1	[more]
AT4G33720.1	1.0e-23	53.06	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT1G50050.1	8.5e-23	53.54	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14580.1	1.5e-22	48.98	basic pathogenesis-related protein 1	[more]

BLAST of CmaCh04G020200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778722387\|ref\|XP_011658476.1\|	2.0e-37	72.28	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|700193135\|gb\|KGN48339.1\|	3.7e-36	71.72	hypothetical protein Csa_6G483242 [Cucumis sativus]	[more]
gi\|700207816\|gb\|KGN62935.1\|	4.9e-36	71.00	hypothetical protein Csa_2G381130 [Cucumis sativus]	[more]
gi\|700207817\|gb\|KGN62936.1\|	3.2e-35	69.31	hypothetical protein Csa_2G381380 [Cucumis sativus]	[more]
gi\|659109009\|ref\|XP_008454501.1\|	2.0e-34	68.32	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020200.1	CmaCh04G020200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 5..102 score: 7.1
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 19..103 score: 3.6E-21coord: 120..155 score: 1.
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 23..103 score: 9.
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 15..155 score: 6.8
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 118..154 score: 2.88E-8coord: 8..102 score: 6.54
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 5..102 score: 7.1

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G020200	Cucumber (Gy14) v2	cgybcmaB657
CmaCh04G020200	Cucumber (Gy14) v2	cgybcmaB663
CmaCh04G020200	Melon (DHL92) v3.6.1	cmamedB717
CmaCh04G020200	Melon (DHL92) v3.6.1	cmamedB747
CmaCh04G020200	Cucumber (Chinese Long) v3	cmacucB0877
CmaCh04G020200	Watermelon (97103) v2	cmawmbB750
CmaCh04G020200	Watermelon (97103) v2	cmawmbB768
CmaCh04G020200	Wax gourd	cmawgoB0908
CmaCh04G020200	Cucurbita moschata (Rifu)	cmacmoB698
CmaCh04G020200	Cucurbita moschata (Rifu)	cmacmoB729
CmaCh04G020200	Cucurbita moschata (Rifu)	cmacmoB741
CmaCh04G020200	Wild cucumber (PI 183967)	cmacpiB753
CmaCh04G020200	Cucumber (Chinese Long) v2	cmacuB744
CmaCh04G020200	Melon (DHL92) v3.5.1	cmameB632
CmaCh04G020200	Watermelon (Charleston Gray)	cmawcgB648
CmaCh04G020200	Watermelon (97103) v1	cmawmB674
CmaCh04G020200	Cucurbita pepo (Zucchini)	cmacpeB721
CmaCh04G020200	Bottle gourd (USVL1VR-Ls)	cmalsiB623
CmaCh04G020200	Bottle gourd (USVL1VR-Ls)	cmalsiB683