CmaCh04G020140 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G020140
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Location	Cma_Chr04 : 12720628 .. 12724406 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCTTTCATGGTCACTTTCATTTTCCTCCTCGCCCTAACCAACGCTCAAAACGCCTCCGGTGACTACCTCGCGCTTCACAACCGAGCTCGAGCCCAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACTGTGGCCGCGTACGCTCAAGCCTATGCAAAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCATTCAGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCATGGGTGGTGAATGTGGGCACTACACTCAGAGGGTGTGGCGGAGCTCGATGCGGCTTGGATGTGCTAGAGTGCCCTGCAAGGCTAATTCTCAATTTGTTGTTTGCAATTATGATCCTCGAGGCAACTATATTGGGAAAAAGCCATATGATTCTTGGGTGGTATGAAGAGATTTGGTTTGAAAATTTTTATGAATTATAATAAAGTTTGTGAGAGAATCATGAGTTTATTTATTGAAATAAAACTACGATATTTCTACAATATTATTATATTGTCTAGAGCATAAACTCTTGTGACTTTGTTTTGACTTTGTTACTTATAAACTCATGATCATAGAGTCTCCCTTCTCATTAAATACACCACATAGAGCCACCTTTGAAGCCTATAGATCACCTATGATCATAGACTCCCCTCGAACAAAATACACCATAGAGCCTCCCTTGAACAAAATACACCATAGAGTCTCCCCTAAAACCTATGGATTTCTAAAAGAAACTCCCTTTAATCGAGACTCGACTTCTTTCTTCGGAGACCTTGAACAAAATACGAAATTTGTTCGACACTTTTAACTACGATTTTTAGGCTTACAACTTTTTCGTTCGACATAGCTAAGTTAAGTTCATAGTTTGATACCACTAATCACGAATCTCTATAATGTTATATGATATTTGTCCACTTTGAACATAATATCATGGGTTTGCTTCGAGCTCCCACAAGAAGTCATGTTAATGAAAATGTATTCTTTAGTTATAAATCTATGATCATTTCCGAACAGTCTTCAACACTGAGAGCATCAGCCACCAGCCAATTGTTGTTCCAAGTCACCGGAAGAAATGCCCTCGGCGGAGATGCGGAAAACCAGTCAAGGTATTTTTAGCCTCCAAATCGAGAGAACCACGACGACGACGATTAACTCCGCTGCAGTATGATACCCACACAGGAGACGAAGACTCACTGCCACAACCTACCGCCATTTACCAGCTCTGAATATGGAGACCAACGGGGCTGGAGTGATGGAAGAACACCCGACGCTCAAAAGGCGACCATTTTGGTTCTTACTTTGCTTATTGGCCACTGCATTCGTCTTTTTCTCGGCTTCGTGGGGAAAAAAACAATAATAATAAATAATAAATAATCAAAATGGTAAAATAAAAGAAGTGCCTGTTTTTTTAATAACTAAAATGCTCTTTTATCAGAATACTCAAATACTGAAATTTGATTGGTACTGTGATCATCGCGCAATGCTCATGGAAAACTTCTTTAGTACTGGGTTTGGTGGAGAATGGGATTCAATAGGACACATCGTTTTAACAGACTCCAAGAAGAAGCACATTGAAGATCATAAATTGAAAGATTTGAAAACAAAGAATTATCTATTTCAAGCATTAGAACGTTCGATCTTGGAGACATCCCTCAACAAGGATACAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGAGTATGACGAAAGGTGATTTGGAGGTCAATAGGGTGGAGCCGAAGAGTAATCAATCGGCTCCAACTATGGCAGCCATGAAGACTGCCCCTGCGGCGTCAAAACCAGCAGGGGTGGTGGAGAAGAAGATTAGAGGATTCAAAAGCCATTGAAAAGAAAGAATCAGGGTTGTTAAACCGAAAGGGCTCTGATACCATGTGAATGTTTAATTAATCCACCACACCTAAATGGTGTAAAAGTTATCTTATTTATAATCAAATGAATTACAAGGATATGGAAATAGTAATAAATGGAAATAACAATAAATAGAAAGATACCTATGATAATAAAGGCAAATATTAGATATTTGCCTTATAATAAAATATCAAATATAATATATATGGTAAACTATAATTTATTATTAAATATCCTTAACAGAGGCAGACAAACCTTCAACAGGGCCACAGTGGAGTGCTATAATTGTCACAAGCTAGGACATTTTCAATAGGAATCTCAAAGGAAGGAGAAAGAGGCAAACTATGCAGAGACTCAAGAAGAGATGTTGTTGACGACTTACGAGAATATGAATAAGGCCAATAAAGAAGATATGTGGTTCCTTGACTCGGGATGTAGCAATCATGTGTGTGGGAAGAAGAAATATTTTTTCAGATTTTGATGGAAGTTTTAGAGATTGCTTGAATTTGGGCAACAACTCAAGCACGGTTGTAACAGGAAAGAGTAATGTACGGTTGCAAGTTAATGTAATCATACTTATATACCAAGAGTTGAAGAACAATTTGTTGAGGATTGGGAAATTGAAATCAAAGGGGCTTACCATTTTGTTTCAAAATGGAACGTGCGAGGTGTTTCATCATGAGAGGCTTAATCATGGAGAAAAAGATGCCTTTGAATCGAATGTTCGTACTGCATGCTATATCACAGCCTGTAGCATCCACTTGTTTCAATACAATCACAAAATATGTTGAACTACTTTGACACGGTAGATATGGAAGACTCTTGAGCAAAAGAAGATGGTGGATGGTTTACCACAGCTCAATTCTCCTCTCGGTGTAAAAATTGTGTGGTGGGTAAACAATCATCAATTCTTTTGTCCAAACAAAAAAAGAAAAAAAGGCATGTTCTGAAATTTAATAAGAAGTTCAAATTCTTATCTTTCTCCCTTCGTTCTCAAGGGAAGTCAAAGACATATAA

mRNA sequence

ATGGCCGCTTTCATGGTCACTTTCATTTTCCTCCTCGCCCTAACCAACGCTCAAAACGCCTCCGGTGACTACCTCGCGCTTCACAACCGAGCTCGAGCCCAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACTGTGGCCGCGTACGCTCAAGCCTATGCAAAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCATTCAGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCATGGGTGGTGAATGTGGGCACTACACTCAGAGGGTGTGGCGGAGCTCGATGCGGCTTGGATGTGCTAGAGTGCCCTGCAAGGCTAATTCTCAATTTGTTGGAAGTCAAAGACATATAA

Coding sequence (CDS)

ATGGCCGCTTTCATGGTCACTTTCATTTTCCTCCTCGCCCTAACCAACGCTCAAAACGCCTCCGGTGACTACCTCGCGCTTCACAACCGAGCTCGAGCCCAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACTGTGGCCGCGTACGCTCAAGCCTATGCAAAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCATTCAGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCATGGGTGGTGAATGTGGGCACTACACTCAGAGGGTGTGGCGGAGCTCGATGCGGCTTGGATGTGCTAGAGTGCCCTGCAAGGCTAATTCTCAATTTGTTGGAAGTCAAAGACATATAA

Protein sequence

MAAFMVTFIFLLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCAMIHSTGPFRENIAAGYYPEFTGADAWVVNVGTTLRGCGGARCGLDVLECPARLILNLLEVKDI

Homology

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BLAST of CmaCh04G020140 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 7.4e-19
Identity = 53/111 (47.75%), Postives = 64/111 (57.66%), Query Frame = 1


Query: 1   MAAFMVTFIFLLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           + A  +TF  L+  + AQN+  DYL  HN AR QVGVGPM W N +AAYAQ YA +R GD
Sbjct: 7   IVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGD 66

Query: 61  CAMIHSTGPFRENIAAGYYPEFTGADA---WVVN---VGTTLRGCGGARCG 106
           C MIHS GP+ EN+AA  +P+   A A   WV            C G  CG
Sbjct: 67  CGMIHSHGPYGENLAAA-FPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCG 116

[Close]

BLAST of CmaCh04G020140 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-15
Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 1


Query: 4   FMVTFIFLLAL----TNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKG 63
           F++ F+ L+      + AQ++  DYL +HN+AR  VGVGPMQW   VAAYA++YA++ +G
Sbjct: 9   FLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRG 68

Query: 64  DCAMIHSTGPFRENIA--AGYYPEFTGADAWV---VNVGTTLRGCGGARCG 106
           +C +IHS GP+ EN+A  +G     +  + WV    N       C G  CG
Sbjct: 69  NCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNGV-CG 118

[Close]

BLAST of CmaCh04G020140 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.5e-15
Identity = 42/100 (42.00%), Postives = 57/100 (57.00%), Query Frame = 1


Query: 11  LLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCAMIHSTGPF 70
           L+    AQ++  DY+  HN+AR+Q+GVGPMQW   +AAYA+ YA + KGDC ++HS GP+
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPY 79

Query: 71  RENIA--AGYYPEFTGADAWV---VNVGTTLRGCGGARCG 106
            EN+A   G        + WV    N       C G  CG
Sbjct: 80  GENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTCNGV-CG 118

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BLAST of CmaCh04G020140 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.2e-14
Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 1


Query: 3  AFMVTFIFLLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCA 62
          A  +TFI   + + AQ    ++L  HN AR +VGVGPM W + +AAYAQ YA +R  DC 
Sbjct: 8  ACFITFIIFHS-SQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCG 67

Query: 63 MIHSTGPFRENIAAGYYPEFTGADA 88
          MIHS GP+ EN+AA  +P+   A A
Sbjct: 68 MIHSDGPYGENLAAA-FPQLNAAGA 90

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BLAST of CmaCh04G020140 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.6e-13
Identity = 39/92 (42.39%), Postives = 54/92 (58.70%), Query Frame = 1


Query: 1   MAAFMVTFIFLLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           + + ++ F+ +   ++AQN+  DYL  HN ARA VGV P+ W N VAAYAQ Y  +   D
Sbjct: 14  LVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAAD 73

Query: 61  CAMIHSTGPFRENIAAGYYPEFTGADA---WV 90
           C ++HS G + EN+A G     T A A   WV
Sbjct: 74  CNLVHSHGQYGENLAQGSGDFMTAAKAVEMWV 105

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BLAST of CmaCh04G020140 vs. TrEMBL
Match: A0A0A0LLX7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.5e-29
Identity = 68/111 (61.26%), Postives = 77/111 (69.37%), Query Frame = 1


Query: 1   MAAFMVTFIFLLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           MA F   F F   LT+AQNA  DY++LHN+ARA VGVGPM W+NTVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPIFTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKND 60

Query: 61  CAMIHSTGPFRENIAAGYYPEFTGADAWVVNVGT------TLRGCGGARCG 106
           CA+IHSTGP+ ENIA GYYPEFTGAD   + VG           C G  CG
Sbjct: 61  CALIHSTGPYGENIAVGYYPEFTGADGVKMWVGEKHLYDYASNSCKGGDCG 111

[Close]

BLAST of CmaCh04G020140 vs. TrEMBL
Match: A0A0A0LSG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.4e-27
Identity = 65/111 (58.56%), Postives = 75/111 (67.57%), Query Frame = 1


Query: 1   MAAFMVTFIFLLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           MA F  TF FL  LT AQ +  DY++LHN+ARA V VGPM W+ TVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPTFTFLFFLTQAQKSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKND 60

Query: 61  CAMIHSTGPFRENIAAGYYPEFTGADAWVVNVGT------TLRGCGGARCG 106
           CA++HSTGP+ ENIA GYYPEFTGAD   + VG           C G  CG
Sbjct: 61  CALVHSTGPYGENIAVGYYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCG 111

[Close]

BLAST of CmaCh04G020140 vs. TrEMBL
Match: A0A0A0KHP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-27
Identity = 62/103 (60.19%), Postives = 74/103 (71.84%), Query Frame = 1


Query: 9   IFLLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCAMIHSTG 68
           +FL  LT+AQN+  DY++LHN+ARA VGVGPM W NTVAAYAQ+YA KRK DCA++HSTG
Sbjct: 1   MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 69  PFRENIAAGYYPEFTGADAWVVNVGT------TLRGCGGARCG 106
           P+ ENIA G+YPEFTGAD   + VG           C G  CG
Sbjct: 61  PYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCG 103

[Close]

BLAST of CmaCh04G020140 vs. TrEMBL
Match: G1FU08_9ROSI (Pathogenesis-related protein OS=Vitis quinquangularis GN=PR-1 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.8e-19
Identity = 54/95 (56.84%), Postives = 61/95 (64.21%), Query Frame = 1


Query: 17  AQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCAMIHSTGPFRENIAA 76
           AQN+  DYL  HN ARAQVGVGPM W NTVAAYAQ YAK+R GDC ++HS GP+ EN+A 
Sbjct: 24  AQNSPQDYLNAHNTARAQVGVGPMSWDNTVAAYAQNYAKQRIGDCNLVHSGGPYGENLAR 83

Query: 77  GYYPEFTGADA---WV---VNVGTTLRGCGGARCG 106
           G  P  TG DA   WV    N       C G +CG
Sbjct: 84  G-SPSLTGTDAVNLWVGEKSNYDHNSNSCVGGQCG 117

[Close]

BLAST of CmaCh04G020140 vs. TrEMBL
Match: E2GEV9_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-18
Identity = 53/95 (55.79%), Postives = 61/95 (64.21%), Query Frame = 1


Query: 17  AQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCAMIHSTGPFRENIAA 76
           AQN+  DY+  HN ARAQVGVGPM W+NTVAAYAQ YA +R GDC ++HS GP+ ENIA 
Sbjct: 25  AQNSPQDYVDAHNAARAQVGVGPMTWNNTVAAYAQNYANQRIGDCNLVHSGGPYGENIAW 84

Query: 77  GYYPEFTGADA---WV---VNVGTTLRGCGGARCG 106
           G  P  TG DA   WV    N       C G +CG
Sbjct: 85  G-SPSLTGTDAVNMWVGEKPNYDYNSNSCVGGKCG 118

[Close]

BLAST of CmaCh04G020140 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 91.3 bits (225), Expect = 4.6e-19
Identity = 44/84 (52.38%), Postives = 58/84 (69.05%), Query Frame = 1


Query: 8   FIFLLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCAMIHST 67
           F+ L+    AQ++  D+LA+HNRARA+VGVGP++W   VAAYA+ YA +RKGDCAM HS+
Sbjct: 17  FLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSS 76

Query: 68  GPFRENIA--AGYYPEFTGADAWV 90
           G + ENIA  +G        D WV
Sbjct: 77  GSYGENIAWSSGSMTGVAAVDMWV 100

[Close]

BLAST of CmaCh04G020140 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 84.3 bits (207), Expect = 5.7e-17
Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = 1


Query: 5  MVTFIFLLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCAMI 64
          +V   FL+  TNAQN   DYL  HN ARAQVGV  + W  T+AAYA  Y+  RK DC ++
Sbjct: 11 IVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLV 70

Query: 65 HSTGPFRENIAAGYYPEFTGADA---WV 90
          HS GP+ EN+A G    F+   A   WV
Sbjct: 71 HSNGPYGENLAKGSSSSFSAISAVKLWV 98

[Close]

BLAST of CmaCh04G020140 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 84.3 bits (207), Expect = 5.7e-17
Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 1


Query: 4   FMVTFIFLLAL----TNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKG 63
           F++ F+ L+      + AQ++  DYL +HN+AR  VGVGPMQW   VAAYA++YA++ +G
Sbjct: 9   FLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRG 68

Query: 64  DCAMIHSTGPFRENIA--AGYYPEFTGADAWV---VNVGTTLRGCGGARCG 106
           +C +IHS GP+ EN+A  +G     +  + WV    N       C G  CG
Sbjct: 69  NCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTCNGV-CG 118

[Close]

BLAST of CmaCh04G020140 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like)

HSP 1 Score: 82.0 bits (201), Expect = 2.8e-16
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 1


Query: 19 NASGDY-----LALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCAMIHSTGPFREN 78
          NA+GD      L +HN+ARA VGVGPM W+ T+A YAQ+YA +R  DCAM HS GPF EN
Sbjct: 35 NANGDVKPQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGEN 94

[Close]

BLAST of CmaCh04G020140 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 81.6 bits (200), Expect = 3.7e-16
Identity = 42/100 (42.00%), Postives = 57/100 (57.00%), Query Frame = 1


Query: 11  LLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCAMIHSTGPF 70
           L+    AQ++  DY+  HN+AR+Q+GVGPMQW   +AAYA+ YA + KGDC ++HS GP+
Sbjct: 20  LVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPY 79

Query: 71  RENIA--AGYYPEFTGADAWV---VNVGTTLRGCGGARCG 106
            EN+A   G        + WV    N       C G  CG
Sbjct: 80  GENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTCNGV-CG 118

[Close]

BLAST of CmaCh04G020140 vs. NCBI nr
Match: gi|700207816|gb|KGN62935.1| (hypothetical protein Csa_2G381130 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 3.6e-29
Identity = 68/111 (61.26%), Postives = 77/111 (69.37%), Query Frame = 1


Query: 1   MAAFMVTFIFLLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           MA F   F F   LT+AQNA  DY++LHN+ARA VGVGPM W+NTVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPIFTFFFFLTHAQNAPQDYISLHNKARAAVGVGPMTWNNTVAAYAQSYANKRKND 60

Query: 61  CAMIHSTGPFRENIAAGYYPEFTGADAWVVNVGT------TLRGCGGARCG 106
           CA+IHSTGP+ ENIA GYYPEFTGAD   + VG           C G  CG
Sbjct: 61  CALIHSTGPYGENIAVGYYPEFTGADGVKMWVGEKHLYDYASNSCKGGDCG 111

[Close]

BLAST of CmaCh04G020140 vs. NCBI nr
Match: gi|778722387|ref|XP_011658476.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 6.1e-29
Identity = 66/111 (59.46%), Postives = 78/111 (70.27%), Query Frame = 1


Query: 1   MAAFMVTFIFLLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           MA    TF+FL  LT+AQN+  DY++LHN+ARA VGVGPM W NTVAAYAQ+YA KRK D
Sbjct: 1   MAILFPTFMFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKND 60

Query: 61  CAMIHSTGPFRENIAAGYYPEFTGADAWVVNVGT------TLRGCGGARCG 106
           CA++HSTGP+ ENIA G+YPEFTGAD   + VG           C G  CG
Sbjct: 61  CALVHSTGPYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCG 111

[Close]

BLAST of CmaCh04G020140 vs. NCBI nr
Match: gi|700207817|gb|KGN62936.1| (hypothetical protein Csa_2G381380 [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 2.0e-27
Identity = 65/111 (58.56%), Postives = 75/111 (67.57%), Query Frame = 1


Query: 1   MAAFMVTFIFLLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           MA F  TF FL  LT AQ +  DY++LHN+ARA V VGPM W+ TVAAYAQ+YA KRK D
Sbjct: 1   MAIFFPTFTFLFFLTQAQKSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKND 60

Query: 61  CAMIHSTGPFRENIAAGYYPEFTGADAWVVNVGT------TLRGCGGARCG 106
           CA++HSTGP+ ENIA GYYPEFTGAD   + VG           C G  CG
Sbjct: 61  CALVHSTGPYGENIAVGYYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCG 111

[Close]

BLAST of CmaCh04G020140 vs. NCBI nr
Match: gi|700193135|gb|KGN48339.1| (hypothetical protein Csa_6G483242 [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 2.5e-27
Identity = 62/103 (60.19%), Postives = 74/103 (71.84%), Query Frame = 1


Query: 9   IFLLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGDCAMIHSTG 68
           +FL  LT+AQN+  DY++LHN+ARA VGVGPM W NTVAAYAQ+YA KRK DCA++HSTG
Sbjct: 1   MFLFVLTHAQNSPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTG 60

Query: 69  PFRENIAAGYYPEFTGADAWVVNVGT------TLRGCGGARCG 106
           P+ ENIA G+YPEFTGAD   + VG           C G  CG
Sbjct: 61  PYGENIAIGFYPEFTGADGVKLWVGEKHLYDYASNSCKGGDCG 103

[Close]

BLAST of CmaCh04G020140 vs. NCBI nr
Match: gi|659109009|ref|XP_008454501.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 128.6 bits (322), Expect = 7.4e-27
Identity = 63/111 (56.76%), Postives = 77/111 (69.37%), Query Frame = 1


Query: 1   MAAFMVTFIFLLALTNAQNASGDYLALHNRARAQVGVGPMQWSNTVAAYAQAYAKKRKGD 60
           MA F  +F+FL  LT+AQN+  DY+ALHN+ARA VGVGPM W++T+AAYA+AYA +R  D
Sbjct: 1   MAIFFASFMFLFFLTHAQNSPQDYIALHNKARAAVGVGPMTWNSTLAAYAEAYANQRIKD 60

Query: 61  CAMIHSTGPFRENIAAGYYPEFTGADA---WVVN---VGTTLRGCGGARCG 106
           CA++HS GP+ ENIA GYYPEFTGAD    WV            C G  CG
Sbjct: 61  CALVHSKGPYGENIAVGYYPEFTGADGVKLWVAEKRLYDYASNSCKGGDCG 111

The following BLAST results are available for this feature:

BLAST of CmaCh04G020140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	7.4e-19	47.75	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1_ARATH	1.0e-15	40.54	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1	[more]
PRB1_ARATH	6.5e-15	42.00	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]
PR1A_SOLLC	4.2e-14	48.24	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1	[more]
PR1B_TOBAC	3.6e-13	42.39	Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1	[more]

BLAST of CmaCh04G020140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLX7_CUCSA	2.5e-29	61.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381130 PE=3 SV=1	[more]
A0A0A0LSG5_CUCSA	1.4e-27	58.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1	[more]
A0A0A0KHP4_CUCSA	1.8e-27	60.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1	[more]
G1FU08_9ROSI	1.8e-19	56.84	Pathogenesis-related protein OS=Vitis quinquangularis GN=PR-1 PE=2 SV=1	[more]
E2GEV9_9ROSI	1.2e-18	55.79	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]

BLAST of CmaCh04G020140 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33720.1	4.6e-19	52.38	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT1G50060.1	5.7e-17	48.86	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G14610.1	5.7e-17	40.54	pathogenesis-related gene 1	[more]
AT2G19990.1	2.8e-16	60.00	pathogenesis-related protein-1-like	[more]
AT2G14580.1	3.7e-16	42.00	basic pathogenesis-related protein 1	[more]

BLAST of CmaCh04G020140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207816\|gb\|KGN62935.1\|	3.6e-29	61.26	hypothetical protein Csa_2G381130 [Cucumis sativus]	[more]
gi\|778722387\|ref\|XP_011658476.1\|	6.1e-29	59.46	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|700207817\|gb\|KGN62936.1\|	2.0e-27	58.56	hypothetical protein Csa_2G381380 [Cucumis sativus]	[more]
gi\|700193135\|gb\|KGN48339.1\|	2.5e-27	60.19	hypothetical protein Csa_6G483242 [Cucumis sativus]	[more]
gi\|659109009\|ref\|XP_008454501.1\|	7.4e-27	56.76	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR014044	CAP_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006310	DNA recombination
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G020140.1	CmaCh04G020140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 3..87 score: 3.4
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 19..85 score: 2.0
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 25..57 score: 4.
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 19..118 score: 2.
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 22..105 score: 3.01
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 3..87 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G020140	CmoCh04G021280	Cucurbita moschata (Rifu)	cmacmoB729

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G020140	CmaCh00G002190	Cucurbita maxima (Rimu)	cmacmaB018

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G020140	Wax gourd	cmawgoB0908
CmaCh04G020140	Cucurbita moschata (Rifu)	cmacmoB698
CmaCh04G020140	Cucurbita moschata (Rifu)	cmacmoB741
CmaCh04G020140	Wild cucumber (PI 183967)	cmacpiB753
CmaCh04G020140	Cucumber (Chinese Long) v2	cmacuB744
CmaCh04G020140	Melon (DHL92) v3.5.1	cmameB632
CmaCh04G020140	Watermelon (Charleston Gray)	cmawcgB648
CmaCh04G020140	Watermelon (97103) v1	cmawmB674
CmaCh04G020140	Cucurbita pepo (Zucchini)	cmacpeB721
CmaCh04G020140	Bottle gourd (USVL1VR-Ls)	cmalsiB623
CmaCh04G020140	Bottle gourd (USVL1VR-Ls)	cmalsiB683
CmaCh04G020140	Cucumber (Gy14) v2	cgybcmaB657
CmaCh04G020140	Cucumber (Gy14) v2	cgybcmaB663
CmaCh04G020140	Melon (DHL92) v3.6.1	cmamedB717
CmaCh04G020140	Melon (DHL92) v3.6.1	cmamedB747
CmaCh04G020140	Cucumber (Chinese Long) v3	cmacucB0877
CmaCh04G020140	Watermelon (97103) v2	cmawmbB750
CmaCh04G020140	Watermelon (97103) v2	cmawmbB768