CmaCh04G019660 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G019660
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCytochrome c oxidase subunit 2
LocationCma_Chr04 : 11092135 .. 11092824 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGTTCTAAAATGGCTGTTCCTCACAATTGCTCCTTGTGATGCAGCGGAACCATGGCAATTAGGATCTCAAGATGCAGCAACACCTATGATTCAAGGAATAATAGACTTACATCACGATATCTTTTTCTTCCTCATTCTTCTTTTTGTTTTCGTATCACGGATCTTGGTTCGCGCTTTATGGCATTTCCACTATCAAAAAAATCAAATACCGCAAAGGATTGTTCATGGAACTACTATTGAGATTCTTTGGACCATATTTCCTAGTATCATTCCGATGTTCATTGCTATACCATCCTTTGCTCTCTTATACTCAATGAACGAGGTAGTAGTAGATCCAGCCATGACTATCAAAGCTATTGGACATCAATGGTATCGGACTTATGAGTATTCTGACTATAATAGTTCCGATGAACAGTCACTCACTTTTGACAGTTATACGATTCCAGAAGATGATCTAGAATTGGGTCAATCACGTTTATTAGAAATGGACATTAGAGTGGTTCTACCAGCCAAAACTCATTTACGTATTATTGTAACACCTGCTGATGTACCTCATAGTTGGGTTGTATCTTCCTCAGGTGTCAAATGTGATGTTGTACCTGGTCATTTAAATCAGATCTCCATTTTGGCACAACGAGAAGGAGTTTACTATAGCAGAAGGAGAAGGAAGGACCTGCAACGATAG

mRNA sequence

ATGATTGTTCTAAAATGGCTGTTCCTCACAATTGCTCCTTGTGATGCAGCGGAACCATGGCAATTAGGATCTCAAGATGCAGCAACACCTATGATTCAAGGAATAATAGACTTACATCACGATATCTTTTTCTTCCTCATTCTTCTTTTTGTTTTCGTATCACGGATCTTGGTTCGCGCTTTATGGCATTTCCACTATCAAAAAAATCAAATACCGCAAAGGATTGTTCATGGAACTACTATTGAGATTCTTTGGACCATATTTCCTAGTATCATTCCGATGTTCATTGCTATACCATCCTTTGCTCTCTTATACTCAATGAACGAGGTAGTAGTAGATCCAGCCATGACTATCAAAGCTATTGGACATCAATGGTATCGGACTTATGAGTATTCTGACTATAATAGTTCCGATGAACAGTCACTCACTTTTGACAGTTATACGATTCCAGAAGATGATCTAGAATTGGGTCAATCACGTTTATTAGAAATGGACATTAGAGTGGTTCTACCAGCCAAAACTCATTTACGTATTATTGTAACACCTGCTGATGTACCTCATAGTTGGGTTGTATCTTCCTCAGGTGTCAAATGTGATGTTGTACCTGGTCATTTAAATCAGATCTCCATTTTGGCACAACGAGAAGGAGTTTACTATAGCAGAAGGAGAAGGAAGGACCTGCAACGATAG

Coding sequence (CDS)

ATGATTGTTCTAAAATGGCTGTTCCTCACAATTGCTCCTTGTGATGCAGCGGAACCATGGCAATTAGGATCTCAAGATGCAGCAACACCTATGATTCAAGGAATAATAGACTTACATCACGATATCTTTTTCTTCCTCATTCTTCTTTTTGTTTTCGTATCACGGATCTTGGTTCGCGCTTTATGGCATTTCCACTATCAAAAAAATCAAATACCGCAAAGGATTGTTCATGGAACTACTATTGAGATTCTTTGGACCATATTTCCTAGTATCATTCCGATGTTCATTGCTATACCATCCTTTGCTCTCTTATACTCAATGAACGAGGTAGTAGTAGATCCAGCCATGACTATCAAAGCTATTGGACATCAATGGTATCGGACTTATGAGTATTCTGACTATAATAGTTCCGATGAACAGTCACTCACTTTTGACAGTTATACGATTCCAGAAGATGATCTAGAATTGGGTCAATCACGTTTATTAGAAATGGACATTAGAGTGGTTCTACCAGCCAAAACTCATTTACGTATTATTGTAACACCTGCTGATGTACCTCATAGTTGGGTTGTATCTTCCTCAGGTGTCAAATGTGATGTTGTACCTGGTCATTTAAATCAGATCTCCATTTTGGCACAACGAGAAGGAGTTTACTATAGCAGAAGGAGAAGGAAGGACCTGCAACGATAG

Protein sequence

MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRALWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIVTPADVPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSRRRRKDLQR
Homology
[Close]
BLAST of CmaCh04G019660 vs. Swiss-Prot
Match: COX2_SOYBN (Cytochrome c oxidase subunit 2 OS=Glycine max GN=COX2 PE=3 SV=2)

HSP 1 Score: 395.2 bits (1014), Expect = 4.9e-109
Identity = 195/217 (89.86%), Postives = 204/217 (94.01%), Query Frame = 1 

Query: 5   KWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRALWHF 64
           +WLFLTIAPCDAAEPWQLG QDAATPM+QGIIDLHHDIFFFLIL+ VFVSRILVRALWHF
Sbjct: 4   EWLFLTIAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSRILVRALWHF 63

Query: 65  HYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKAIGHQ 124
           HY+KN IPQRIVHGTTIEIL TIFPSIIPMFIAIPSFALLYSM+EVVVDPA+TIKAIGHQ
Sbjct: 64  HYKKNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDEVVVDPAITIKAIGHQ 123

Query: 125 WYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIVTPAD 184
           WYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLE+D RVV+PAKTHLRIIVTPAD
Sbjct: 124 WYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVVPAKTHLRIIVTPAD 183

Query: 185 VPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           VPHSW V S GVKCD VPG LNQISI  QREGVYY +
Sbjct: 184 VPHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQ 220

[Close]
BLAST of CmaCh04G019660 vs. Swiss-Prot
Match: COX2_PEA (Cytochrome c oxidase subunit 2 OS=Pisum sativum GN=COX2 PE=3 SV=2)

HSP 1 Score: 391.7 bits (1005), Expect = 5.4e-108
Identity = 194/218 (88.99%), Postives = 203/218 (93.12%), Query Frame = 1 

Query: 4   LKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRALWH 63
           L+WLFLTIAPCDAAEPWQLG QDAATPM+QGIIDLHHDIFFFLIL+ VFVSRILVRALWH
Sbjct: 3   LEWLFLTIAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSRILVRALWH 62

Query: 64  FHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKAIGH 123
           FHY+KN IPQRIVHGTTIEIL TIFPSIIPMFIAIPSFALLYSM+ V+VDPAMTIKAIGH
Sbjct: 63  FHYKKNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDGVLVDPAMTIKAIGH 122

Query: 124 QWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIVTPA 183
           QWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQS LLE+D RVV+PAKTHLRIIVTPA
Sbjct: 123 QWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSGLLEVDNRVVVPAKTHLRIIVTPA 182

Query: 184 DVPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           DVPHSW V S GVKCD VPG LNQISI  QREGVYY +
Sbjct: 183 DVPHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQ 220

[Close]
BLAST of CmaCh04G019660 vs. Swiss-Prot
Match: COX2_ARATH (Cytochrome c oxidase subunit 2 OS=Arabidopsis thaliana GN=COX2 PE=2 SV=2)

HSP 1 Score: 380.6 bits (976), Expect = 1.2e-104
Identity = 190/221 (85.97%), Postives = 201/221 (90.95%), Query Frame = 1 

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRA 60
           MIVLKWLF TI+PCDAAEPWQLG QDAATP++QGIIDLHHDIFFFLIL+ VFV  ILVRA
Sbjct: 1   MIVLKWLFFTISPCDAAEPWQLGFQDAATPIMQGIIDLHHDIFFFLILILVFVLWILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKA 120
           LWHFHY+KN IPQRIVHGTTIEILWTIFPSII MFIAIPSFALLYSM+EVVVDPA+TIKA
Sbjct: 61  LWHFHYKKNAIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIV 180
           IGHQWY TYEYSDYNSSDEQSLTFDSY IPE+DLELGQ RLLE+D RVV+PAKTHLRIIV
Sbjct: 121 IGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEEDLELGQLRLLEVDNRVVVPAKTHLRIIV 180

Query: 181 TPADVPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           T ADV HSW V S GVKCD VPG LNQISIL QREGVYY +
Sbjct: 181 TSADVLHSWAVPSLGVKCDAVPGRLNQISILVQREGVYYGQ 221

[Close]
BLAST of CmaCh04G019660 vs. Swiss-Prot
Match: COX2_DAUCA (Cytochrome c oxidase subunit 2 OS=Daucus carota GN=COX2 PE=3 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 1.2e-104
Identity = 190/214 (88.79%), Postives = 198/214 (92.52%), Query Frame = 1 

Query: 8   FLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRALWHFHYQ 67
           F T +PCDAAEPWQLGSQDAATPM+QGIIDLHHDIFFFLIL+ VFVSRILVRALWHFH +
Sbjct: 9   FFTNSPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILILVFVSRILVRALWHFHSK 68

Query: 68  KNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKAIGHQWYR 127
           KN IPQRIVHGTTIEIL TIFPSIIPMFIAIPSFALLYSM+EVVVDPAMTIKAIGHQWYR
Sbjct: 69  KNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYR 128

Query: 128 TYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIVTPADVPH 187
           TYEYSDYNSSDEQSLTFDSYTIPEDD ELGQSRLLE+D RVV+PAKTHLRIIVT ADVPH
Sbjct: 129 TYEYSDYNSSDEQSLTFDSYTIPEDDPELGQSRLLEVDNRVVVPAKTHLRIIVTSADVPH 188

Query: 188 SWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           SW V SSGVKCD VPG LNQISI  QREGVYY +
Sbjct: 189 SWAVPSSGVKCDAVPGRLNQISISVQREGVYYGQ 222

[Close]
BLAST of CmaCh04G019660 vs. Swiss-Prot
Match: COX2_BETVU (Cytochrome c oxidase subunit 2 OS=Beta vulgaris GN=COX2 PE=2 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 3.6e-104
Identity = 189/221 (85.52%), Postives = 202/221 (91.40%), Query Frame = 1 

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRA 60
           MIV +WLF T+APCDAAEPWQLG QDAATPM+QGIIDLHHDIFFFLIL+ VFVS ILVRA
Sbjct: 1   MIVREWLFFTMAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSWILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKA 120
           LWHFHY+KN IPQRIVHGTTIEI+ TIFPSII MFIAIPSFALLYSM+EVVVDPA+TIKA
Sbjct: 61  LWHFHYKKNPIPQRIVHGTTIEIIRTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIV 180
           IGHQWYR+YEYSDYNSSDEQSLTFDSYTIPEDD ELGQSRLLE+D RVV+PAKTH+RIIV
Sbjct: 121 IGHQWYRSYEYSDYNSSDEQSLTFDSYTIPEDDPELGQSRLLEVDNRVVVPAKTHIRIIV 180

Query: 181 TPADVPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           T ADV HSW V SSGVKCD VPG LNQ SIL QREGVYY +
Sbjct: 181 TSADVLHSWAVPSSGVKCDAVPGRLNQTSILVQREGVYYGQ 221

[Close]
BLAST of CmaCh04G019660 vs. TrEMBL
Match: G3EU21_CUCME (Cytochrome c oxidase subunit 2 OS=Cucumis melo subsp. melo GN=cox2 PE=3 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 7.8e-114
Identity = 206/221 (93.21%), Postives = 212/221 (95.93%), Query Frame = 1 

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRA 60
           MIVLKWLFLTIAPCDAAEPWQLGSQDAATPM+QGIIDLHHDIFFFLIL+FVFVSRILVRA
Sbjct: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKA 120
           LWHFHY K +IPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSM+EVVVDPAMTIKA
Sbjct: 61  LWHFHYSKKKIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLE+D RVVLPAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180

Query: 181 TPADVPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           TPADVPHSW V SSGVKCD VPG LNQISIL QREGVYY +
Sbjct: 181 TPADVPHSWAVPSSGVKCDAVPGRLNQISILVQREGVYYGQ 221

[Close]
BLAST of CmaCh04G019660 vs. TrEMBL
Match: G3EJ04_CUCSA (Cytochrome c oxidase subunit 2 OS=Cucumis sativus GN=cox2 PE=3 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 2.3e-113
Identity = 205/221 (92.76%), Postives = 212/221 (95.93%), Query Frame = 1 

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRA 60
           MIVLKWLFLTIAPCDAAEPWQLGSQDAATPM+QGIIDLHHDIFFFLIL+FVFVSRILVRA
Sbjct: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKA 120
           LWHFHY + +IPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSM+EVVVDPAMTIKA
Sbjct: 61  LWHFHYSQKKIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLE+D RVVLPAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180

Query: 181 TPADVPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           TPADVPHSW V SSGVKCD VPG LNQISIL QREGVYY +
Sbjct: 181 TPADVPHSWAVPSSGVKCDAVPGRLNQISILVQREGVYYGQ 221

[Close]
BLAST of CmaCh04G019660 vs. TrEMBL
Match: A0A142BZ12_ZIZJJ (Cytochrome c oxidase subunit 2 OS=Ziziphus jujuba GN=cox2 PE=3 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 8.9e-110
Identity = 200/221 (90.50%), Postives = 210/221 (95.02%), Query Frame = 1 

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRA 60
           MIVL+WLFLTIAPCDAAEPWQLGSQDAATPM+QGI+DLHHDIFFFLIL+ VFVSRILVRA
Sbjct: 1   MIVLEWLFLTIAPCDAAEPWQLGSQDAATPMMQGIMDLHHDIFFFLILILVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKA 120
           LWHFHY+KN IPQRIVHGTTIEIL TIFPSIIPMFIAIPSFALLYSM+EVVVDPA+TIKA
Sbjct: 61  LWHFHYKKNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDEVVVDPAITIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLE+D RVV+PAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVVPAKTHLRIIV 180

Query: 181 TPADVPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           TPADVPHSW V SSGVKCD VPG LNQISI  QREGVYY +
Sbjct: 181 TPADVPHSWAVPSSGVKCDAVPGRLNQISISVQREGVYYGQ 221

[Close]
BLAST of CmaCh04G019660 vs. TrEMBL
Match: A0A0G3BG79_9ROSI (Cytochrome c oxidase subunit 2 OS=Francoa sonchifolia GN=cox2 PE=3 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 2.6e-109
Identity = 200/221 (90.50%), Postives = 209/221 (94.57%), Query Frame = 1 

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRA 60
           MIVL+WLFLTIAPCDAAEPWQLGSQDAATPM+QGIIDLHHDIFFFLIL+ VFVSRILVRA
Sbjct: 1   MIVLEWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILILVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKA 120
           LWHFHY+KN IPQRIVHGTTIEIL TIFPSIIPMFIAIPSFALLYSM+EVVVDPA+TIKA
Sbjct: 61  LWHFHYEKNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDEVVVDPAITIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLE+D RVV+PAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVVPAKTHLRIIV 180

Query: 181 TPADVPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           T ADVPHSW V SSGVKCD VPG LNQISI  QREGVYY +
Sbjct: 181 TSADVPHSWAVPSSGVKCDAVPGRLNQISISVQREGVYYGQ 221

[Close]
BLAST of CmaCh04G019660 vs. TrEMBL
Match: R4IU68_VICFA (Cytochrome c oxidase subunit 2 OS=Vicia faba PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.2e-108
Identity = 198/218 (90.83%), Postives = 205/218 (94.04%), Query Frame = 1 

Query: 4   LKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRALWH 63
           L+WLFLTIAPCDAAEPWQLG QDAATPM+QGIIDLHHDIFFFLIL+ VFVSRILVRALWH
Sbjct: 3   LEWLFLTIAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSRILVRALWH 62

Query: 64  FHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKAIGH 123
           FHYQKN IPQRIVHGTTIEIL TIFPSIIPMFIAIPSFALLYSM+EVVVDPAMTIKAIGH
Sbjct: 63  FHYQKNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKAIGH 122

Query: 124 QWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIVTPA 183
           QWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLE+D RVV+PAKTHLRIIVTPA
Sbjct: 123 QWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVVPAKTHLRIIVTPA 182

Query: 184 DVPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           DVPHSW V S GVKCD VPG LNQISI  QREGVYY +
Sbjct: 183 DVPHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQ 220

[Close]
BLAST of CmaCh04G019660 vs. TAIR10
Match: ATMG00160.1 (ATMG00160.1 cytochrome oxidase 2)

HSP 1 Score: 391.3 bits (1004), Expect = 4.0e-109
Identity = 195/221 (88.24%), Postives = 206/221 (93.21%), Query Frame = 1 

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRA 60
           MIVLKWLFLTI+PCDAAEPWQLGSQDAATP++QGIIDLHHDIFFFLIL+ VFV  ILVRA
Sbjct: 1   MIVLKWLFLTISPCDAAEPWQLGSQDAATPIMQGIIDLHHDIFFFLILILVFVLWILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKA 120
           LWHFHY+KN IPQRIVHGTTIEIL TIFPSII MFIAIPSFALLYSM+EVVVDPA+TIKA
Sbjct: 61  LWHFHYKKNAIPQRIVHGTTIEILRTIFPSIISMFIAIPSFALLYSMDEVVVDPAITIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSY IPE+DLELGQSRLLE+D RVV+PAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYMIPEEDLELGQSRLLEVDNRVVVPAKTHLRIIV 180

Query: 181 TPADVPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           T ADVPHSW V SSGVKCD VPG LNQISIL QREGVYY +
Sbjct: 181 TSADVPHSWAVPSSGVKCDAVPGRLNQISILVQREGVYYGQ 221

[Close]
BLAST of CmaCh04G019660 vs. TAIR10
Match: AT2G07695.1 (AT2G07695.1 Cytochrome C oxidase subunit II-like, transmembrane domain)

HSP 1 Score: 175.6 bits (444), Expect = 3.4e-44
Identity = 87/103 (84.47%), Postives = 93/103 (90.29%), Query Frame = 1 

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRA 60
           MIVLKWLFLTI+PCDAAEPWQLGSQDAATP++QGIIDLHHDIFFFLIL+ VFV  ILVRA
Sbjct: 1   MIVLKWLFLTISPCDAAEPWQLGSQDAATPIMQGIIDLHHDIFFFLILILVFVLWILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFAL 104
           LWHFHY+KN IPQRIVHGTTIEIL TIFP  I +FI  PSFAL
Sbjct: 61  LWHFHYKKNAIPQRIVHGTTIEILRTIFPCFISIFIVEPSFAL 103

[Close]
BLAST of CmaCh04G019660 vs. TAIR10
Match: ATMG01280.1 (ATMG01280.1 Cytochrome C oxidase subunit II-like, transmembrane domain)

HSP 1 Score: 175.6 bits (444), Expect = 3.4e-44
Identity = 87/103 (84.47%), Postives = 93/103 (90.29%), Query Frame = 1 

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRA 60
           MIVLKWLFLTI+PCDAAEPWQLGSQDAATP++QGIIDLHHDIFFFLIL+ VFV  ILVRA
Sbjct: 1   MIVLKWLFLTISPCDAAEPWQLGSQDAATPIMQGIIDLHHDIFFFLILILVFVLWILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFAL 104
           LWHFHY+KN IPQRIVHGTTIEIL TIFP  I +FI  PSFAL
Sbjct: 61  LWHFHYKKNAIPQRIVHGTTIEILRTIFPCFISIFIVEPSFAL 103

[Close]
BLAST of CmaCh04G019660 vs. NCBI nr
Match: gi|345034419|gb|AEN56105.1| (cytochrome c oxidase subunit 2 [Cucumis melo subsp. melo])

HSP 1 Score: 417.9 bits (1073), Expect = 1.1e-113
Identity = 206/221 (93.21%), Postives = 212/221 (95.93%), Query Frame = 1 

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRA 60
           MIVLKWLFLTIAPCDAAEPWQLGSQDAATPM+QGIIDLHHDIFFFLIL+FVFVSRILVRA
Sbjct: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKA 120
           LWHFHY K +IPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSM+EVVVDPAMTIKA
Sbjct: 61  LWHFHYSKKKIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLE+D RVVLPAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180

Query: 181 TPADVPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           TPADVPHSW V SSGVKCD VPG LNQISIL QREGVYY +
Sbjct: 181 TPADVPHSWAVPSSGVKCDAVPGRLNQISILVQREGVYYGQ 221

[Close]
BLAST of CmaCh04G019660 vs. NCBI nr
Match: gi|346683390|ref|YP_004849352.1| (cytochrome c oxidase subunit 2 [Cucumis sativus])

HSP 1 Score: 416.4 bits (1069), Expect = 3.3e-113
Identity = 205/221 (92.76%), Postives = 212/221 (95.93%), Query Frame = 1 

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRA 60
           MIVLKWLFLTIAPCDAAEPWQLGSQDAATPM+QGIIDLHHDIFFFLIL+FVFVSRILVRA
Sbjct: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKA 120
           LWHFHY + +IPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSM+EVVVDPAMTIKA
Sbjct: 61  LWHFHYSQKKIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLE+D RVVLPAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180

Query: 181 TPADVPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           TPADVPHSW V SSGVKCD VPG LNQISIL QREGVYY +
Sbjct: 181 TPADVPHSWAVPSSGVKCDAVPGRLNQISILVQREGVYYGQ 221

[Close]
BLAST of CmaCh04G019660 vs. NCBI nr
Match: gi|1009175132|ref|XP_015868714.1| (PREDICTED: uncharacterized protein LOC107406125 [Ziziphus jujuba])

HSP 1 Score: 404.4 bits (1038), Expect = 1.3e-109
Identity = 200/221 (90.50%), Postives = 210/221 (95.02%), Query Frame = 1 

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRA 60
           MIVL+WLFLTIAPCDAAEPWQLGSQDAATPM+QGI+DLHHDIFFFLIL+ VFVSRILVRA
Sbjct: 354 MIVLEWLFLTIAPCDAAEPWQLGSQDAATPMMQGIMDLHHDIFFFLILILVFVSRILVRA 413

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKA 120
           LWHFHY+KN IPQRIVHGTTIEIL TIFPSIIPMFIAIPSFALLYSM+EVVVDPA+TIKA
Sbjct: 414 LWHFHYKKNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDEVVVDPAITIKA 473

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLE+D RVV+PAKTHLRIIV
Sbjct: 474 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVVPAKTHLRIIV 533

Query: 181 TPADVPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           TPADVPHSW V SSGVKCD VPG LNQISI  QREGVYY +
Sbjct: 534 TPADVPHSWAVPSSGVKCDAVPGRLNQISISVQREGVYYGQ 574

[Close]
BLAST of CmaCh04G019660 vs. NCBI nr
Match: gi|1016470812|ref|YP_009241671.1| (cytochrome c oxidase subunit 2 (mitochondrion) [Ziziphus jujuba])

HSP 1 Score: 404.4 bits (1038), Expect = 1.3e-109
Identity = 200/221 (90.50%), Postives = 210/221 (95.02%), Query Frame = 1 

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRA 60
           MIVL+WLFLTIAPCDAAEPWQLGSQDAATPM+QGI+DLHHDIFFFLIL+ VFVSRILVRA
Sbjct: 1   MIVLEWLFLTIAPCDAAEPWQLGSQDAATPMMQGIMDLHHDIFFFLILILVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKA 120
           LWHFHY+KN IPQRIVHGTTIEIL TIFPSIIPMFIAIPSFALLYSM+EVVVDPA+TIKA
Sbjct: 61  LWHFHYKKNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDEVVVDPAITIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLE+D RVV+PAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVVPAKTHLRIIV 180

Query: 181 TPADVPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           TPADVPHSW V SSGVKCD VPG LNQISI  QREGVYY +
Sbjct: 181 TPADVPHSWAVPSSGVKCDAVPGRLNQISISVQREGVYYGQ 221

[Close]
BLAST of CmaCh04G019660 vs. NCBI nr
Match: gi|825716138|gb|AKJ25573.1| (cytochrome c oxidase subunit 2 (mitochondrion) [Francoa sonchifolia])

HSP 1 Score: 402.9 bits (1034), Expect = 3.7e-109
Identity = 200/221 (90.50%), Postives = 209/221 (94.57%), Query Frame = 1 

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMIQGIIDLHHDIFFFLILLFVFVSRILVRA 60
           MIVL+WLFLTIAPCDAAEPWQLGSQDAATPM+QGIIDLHHDIFFFLIL+ VFVSRILVRA
Sbjct: 1   MIVLEWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILILVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMNEVVVDPAMTIKA 120
           LWHFHY+KN IPQRIVHGTTIEIL TIFPSIIPMFIAIPSFALLYSM+EVVVDPA+TIKA
Sbjct: 61  LWHFHYEKNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDEVVVDPAITIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEMDIRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLE+D RVV+PAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVVPAKTHLRIIV 180

Query: 181 TPADVPHSWVVSSSGVKCDVVPGHLNQISILAQREGVYYSR 222
           T ADVPHSW V SSGVKCD VPG LNQISI  QREGVYY +
Sbjct: 181 TSADVPHSWAVPSSGVKCDAVPGRLNQISISVQREGVYYGQ 221

The following BLAST results are available for this feature:
BLAST of CmaCh04G019660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COX2_SOYBN4.9e-10989.86Cytochrome c oxidase subunit 2 OS=Glycine max GN=COX2 PE=3 SV=2[more]
COX2_PEA5.4e-10888.99Cytochrome c oxidase subunit 2 OS=Pisum sativum GN=COX2 PE=3 SV=2[more]
COX2_ARATH1.2e-10485.97Cytochrome c oxidase subunit 2 OS=Arabidopsis thaliana GN=COX2 PE=2 SV=2[more]
COX2_DAUCA1.2e-10488.79Cytochrome c oxidase subunit 2 OS=Daucus carota GN=COX2 PE=3 SV=1[more]
COX2_BETVU3.6e-10485.52Cytochrome c oxidase subunit 2 OS=Beta vulgaris GN=COX2 PE=2 SV=1[more]
BLAST of CmaCh04G019660 vs. TrEMBL
Match NameE-valueIdentityDescription
G3EU21_CUCME7.8e-11493.21Cytochrome c oxidase subunit 2 OS=Cucumis melo subsp. melo GN=cox2 PE=3 SV=1[more]
G3EJ04_CUCSA2.3e-11392.76Cytochrome c oxidase subunit 2 OS=Cucumis sativus GN=cox2 PE=3 SV=1[more]
A0A142BZ12_ZIZJJ8.9e-11090.50Cytochrome c oxidase subunit 2 OS=Ziziphus jujuba GN=cox2 PE=3 SV=1[more]
A0A0G3BG79_9ROSI2.6e-10990.50Cytochrome c oxidase subunit 2 OS=Francoa sonchifolia GN=cox2 PE=3 SV=1[more]
R4IU68_VICFA2.2e-10890.83Cytochrome c oxidase subunit 2 OS=Vicia faba PE=3 SV=1[more]
BLAST of CmaCh04G019660 vs. TAIR10
Match NameE-valueIdentityDescription
ATMG00160.14.0e-10988.24ATMG00160.1 cytochrome oxidase 2[more]
AT2G07695.13.4e-4484.47 Cytochrome C oxidase subunit II-like, transmembrane domain[more]
ATMG01280.13.4e-4484.47ATMG01280.1 Cytochrome C oxidase subunit II-like, transmembrane domain[more]
BLAST of CmaCh04G019660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|345034419|gb|AEN56105.1|1.1e-11393.21cytochrome c oxidase subunit 2 [Cucumis melo subsp. melo][more]
gi|346683390|ref|YP_004849352.1|3.3e-11392.76cytochrome c oxidase subunit 2 [Cucumis sativus][more]
gi|1009175132|ref|XP_015868714.1|1.3e-10990.50PREDICTED: uncharacterized protein LOC107406125 [Ziziphus jujuba][more]
gi|1016470812|ref|YP_009241671.1|1.3e-10990.50cytochrome c oxidase subunit 2 (mitochondrion) [Ziziphus jujuba][more]
gi|825716138|gb|AKJ25573.1|3.7e-10990.50cytochrome c oxidase subunit 2 (mitochondrion) [Francoa sonchifolia][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002429CcO_II-like_C
IPR008972Cupredoxin
IPR011759Cyt_c_oxidase_su2_TM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
GO:0005507copper ion binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0022900electron transport chain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902600 hydrogen ion transmembrane transport
biological_process GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
biological_process GO:0022900 electron transport chain
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0045277 respiratory chain complex IV
cellular_component GO:0016020 membrane
molecular_function GO:0005507 copper ion binding
molecular_function GO:0004129 cytochrome-c oxidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G019660.1CmaCh04G019660.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002429Cytochrome c oxidase subunit II C-terminalPFAMPF00116COX2coord: 116..220
score: 1.3
IPR002429Cytochrome c oxidase subunit II C-terminalPROFILEPS50857COX2_CUAcoord: 113..229
score: 29
IPR008972CupredoxinGENE3DG3DSA:2.60.40.420coord: 113..220
score: 1.2
IPR008972CupredoxinunknownSSF49503Cupredoxinscoord: 113..220
score: 6.84
IPR011759Cytochrome C oxidase subunit II, transmembrane domainGENE3DG3DSA:1.10.287.90coord: 17..110
score: 7.7
IPR011759Cytochrome C oxidase subunit II, transmembrane domainPFAMPF02790COX2_TMcoord: 17..103
score: 6.9
IPR011759Cytochrome C oxidase subunit II, transmembrane domainPROFILEPS50999COX2_TMcoord: 16..111
score: 23
IPR011759Cytochrome C oxidase subunit II, transmembrane domainunknownSSF81464Cytochrome c oxidase subunit II-like, transmembrane regioncoord: 7..110
score: 7.03
NoneNo IPR availablePRINTSPR01166CYCOXIDASEIIcoord: 160..181
score: 3.1E-44coord: 77..89
score: 3.1E-44coord: 89..109
score: 3.1E-44coord: 112..131
score: 3.1E-44coord: 184..204
score: 3.1E-44coord: 204..221
score: 3.1
NoneNo IPR availablePANTHERPTHR22888CYTOCHROME C OXIDASE, SUBUNIT IIcoord: 1..221
score: 6.7E
NoneNo IPR availablePANTHERPTHR22888:SF9CYTOCHROME C OXIDASE SUBUNIT 2coord: 1..221
score: 6.7E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G019660Watermelon (97103) v2cmawmbB726
CmaCh04G019660Cucurbita moschata (Rifu)cmacmoB679
CmaCh04G019660Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G019660Watermelon (Charleston Gray)cmawcgB622
CmaCh04G019660Watermelon (97103) v1cmawmB739
CmaCh04G019660Bottle gourd (USVL1VR-Ls)cmalsiB635
CmaCh04G019660Cucumber (Gy14) v2cgybcmaB670
CmaCh04G019660Melon (DHL92) v3.6.1cmamedB737