CmaCh04G019640 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G019640
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPhotosystem II protein D1
LocationCma_Chr04 : 11023927 .. 11032723 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGGTATGGAAGTTATGTATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTACTGTTGAAGTTACATCTATCAATGGATAAGACTGATTTCTGTCTTAGTGTATACAAGTTCTTTCAAGTAAAGGAGCAATAACCAATTTCTTGTTTTCTCAAGAGGATTCAAAGATTGATTTTTCTTGTTCTCGGGCTATGGGCATTTGACTGCCCAAGGTAATTGAGAGAAATTAGATAGAGTCGTTTTGATCAGCGACGAATAGGCTTTGAGGCCTTTCGTTAGCTAACTAATAAAGATTCTTTCTGATCGATCTTGTAGATATATTCCGTCTACGTGTAAAACTGAGAGGCAAGACCGATTCTTATAAACAGTTTCAGGTCTATTCTCCTTTAGGCTTTGAAAGGTCTTAATTTGCATATTCAGAAAGAAACTAGCTCTGGAATGTAGGGCTCTTCAGTTGGATCATTAGAAGCGAGTTGCCACTTTCTTCCTACTAGCTCTAGTCTCTTTTTCCTCTGCTTCAAGTTCTAATTCGAGTTCTAAGGGGAAGCGAATGGTCGGGGTTGCTAGGCTTGCCAAAGCTACGAACTAGGTCGGCCGATAGGCAAAGTTGGTCTTTGGGTTAGGGTGTTGAAAGCAAAAGACAAGGTTTTAGATACTGGCCTTCCTATGGTTGAGTGGGATTCCTACAAAGGGAAGATGTTGTCTTATTCGTTCAAGTGCCTGGTGAAAGCACTTTCCTGGTTGAAGGACGGGTTGTAGTGGGGGATGGAGCTTCTGCCAATTTTTAGACGGATCGCTGGCTTGATGTGCCGGTAGTGGATATGCTTGATAATTTGCCTCAATATTTGGATCTTACAACAAAAATACAAGAGTTGATTCTTGAACCAGGTGTGTGGAATTCGGCAAAGCTTAAGGAGTATGTGCCCACTGACGTTGTTGCAAACGTTGTTGGGTACCCTTTATTTAGCAGGGTTTGTGAGTACAAAAGACAGCGTCTTCTGGAGACATACATCCTTGGGGATCTTTACTTCAAGGTCAGCTTATAGAGCCTTGCAAGATGGTGAAGCTGGACAAAGCTCATATGACTTCTCTTGGGTATGGAAATTGAAGATTCCAAATGGAGCTATTTTATTTGGCTTGCATTGAGGGATAGATTACCAACTAATAGTCTTAGACACTGTTGGGGAATGGATGGAAATGGTGCATGCAAGCAGTGTCCGAGAGAGATGGAAACTGTAATACATGTGCTAAGAGACTGCCGTGTATCAAGGGATATCTGGAACTCATTGAGGTCAGATTTACAGGACACTTCTTTCTTTTCTCTTCCTCTTAGGGAGTGGCTGAAAGAAAATGCATATGAGTCTAAAGATGGCTACTGGAAAACTTTGTTTGTTGTAACGTGCTGGCGTATTTGGACAAGAAGGTGTCGTGTGGTCTTCAATGAGGACGTGGATGAAGAGAAAGACGTGGGACTTCTCAGAAATATCAGACTGACTACTATGGAGGTGGTAAGTGCTTTATCAGGTACACAGCCTGCTATGGCGGACGATAGGCTGATAAGTTGGCAGCCACCGAATGGAAGCGCAGTCAGGCTTAACTTAACACGGACGGAGCTTCACATGGAAATCCTGGAATCTCAGGAGCTGGTGGCCTTATTCGAGCTGTAGATGGGAAATGGTTGATGGGTTTTCAAGCTTGCATGGGGTTTTGTTCAAATAATGTGGCTGAGATGCAAGCTTTACGATTGAGATTGTTATTGGCATGGGGCTTGGGCTTTAGAGATGTCCAATGTAGTGTTGACTCCAAGGTGGTAGTAGATTTGATTGCTGATGCTGATACACGGTTTAATCCTCATGGGAATCTCATTGAAGATGTTCGTGCTATTATGAGAAGGTAATGGTCCTGTACCCTGCATCACACTCTCCGAGAAGGAAATTTCTGCGCTGATTTTCTTGCGCTGTTACATTGGGTCAGAATGAAAGGTTCTCCATTCCCCACCGGCGGAAATACTCTCTTGATGGCTGATGCTCAAGTGCCTTCCCAAGAGGCTTTCAATTGTAATCGTTTTTGCTTTCCTTTGATCGGAACTATTATCTATCACCACTGAGTAAGGAATCAAAGTTACGGGTATAAGTGGAAGGCGAAGTCAGGTTATAGCTACGCAGCGAAGAAAGGAGGTGATCAGTACCCGTAGCGTAGCGACGAAGAAGATGATCATTTATTTAGTAGGCGAACAGTCGAAGAACCACTCTAACGAAGAATGGAGCTACTTCGTAAGGAATAGGAATCAGGCTTTGGTTTCACAAATTAATGCCAGTTTCTTTATCGGTCAGAGATGAATCTAAATCAATTTCATATTCGTAAGAGTTCGTAAGAGAAAGAGCGAAGTAGGAAAGATCAGAAGATTCAGAGTAGACTCCTTCTTCCGACCTATATATAATAGAATTCGTTTAGCAATCCTTCGGCGAGCTTTCCTGCAGGTTTAAAGCTTCTGTTCGCCTACTATCAATTACACATTCGTATCTGCTGAGAAATAGAATAGGCTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACAAAAATACAAGAGTTGATTCTTGAACCAGGTGTGTGGAATTCGGCAAAGCTTAAGGAGTATGTGCCCACTGACGTTGTTGCAAACGTTGTTGGGTACCCTTTATTTAGCAGGGTTTGTGAGTACAAAAGACAGCGTCTTCTGGAGACATACATCCTTGGGGATCTTTACTTCAAGGTCAGCTTATAGAGCCTTGCAAGATGGTGAAGCTGGACAAAGCTCATATGACTTCTCTTGGGTATGGAAATTGAAGATTCCAAATGGAGCTATTTTATTTGGCTTGCATTGAGGGATAGATTACCAACTAATAGTCTTAGACACTGTTGGGGAATGGATGGAAATGGTGCATGCAAGCAGTGTCCGAGAGAGATGGAAACTGTAATACATGTGCTAAGAGACTGCCGTGTATCAAGGGATATCTGGAACTCATTGAGGTCAGATTTACAGGACACTTCTTTCTTTTCTCTTCCTCTTAGGGAGTGGCTGAAAGAAAATGCATATGAGTCTAAAGATGGCTACTGGAAAACTTTGTTTGTTGTAACGTGCTGGCGTATTTGGACAAGAAGGTGTCGTGTGGTCTTCAATGAGGACGTGGATGAAAAGAAAGACATGGGACTTCTCAGAAATATCAGACTGACTACTATGGAGGTGGTAAGTGCTTTATCAGGTACACAGCCTGCTATGGCGGACGATAGGCTGATACTTGCAGCCACCGAATGGAAGCGCAGTCAGGCTTAACTTAACACGGACGGAGCTTCACATGGAAATCCTGGAATCTCAGGAGCTGGTGGCCTTATTCGAGCTGTAGATGGGAAATGGTTGATGGGTTTTCAAGCTTGCATGGGGTTTTGTTCAAATAATGTGGCTGAGATGCAAGCTTTACGATTGAGATTGTTATTGGCATGGGGCTTGGGCTTTAGAGATGTCCAATGTAGTGTTGACTCCAAGGTGGTAGTAGATTTGATTGCTGATGCTGATACACGGTTTAATCCTCATGGGAATCTCATTGAAGATGTTCGTGCTATTATGAGAAGGTAATGGTCCTGTACCCTGCATCACACTCTCCGAGAAGGAAATTTCTGCGCTGATTTTCTTGCGCTGTTACATTGGGTCAGAATGAAAGGTTCTCCATTCCCCACCGGCGGAAATACTCTCTTGATGGCTGATGCTCAAGTGCCTTCCCAAGAGGCTTTCAATTGTAATCGTTTTTGCTTTCCTTTGATCGGAACTATTATCTATCACCACTGAGTAAGGAATCAAAGTTACGGGTATAAGTGGAAGGCGAAGTCAGGTTATAGCTACGCAGCGAAGAAAGGAGGTGATCAGTACCCGTAGCGTAGCGACGAAGAAGATGATCATTTATTTAGTAGGCGAACAGTCGAAGAACCACTCTAACGAAGAATGGAGCTACTTCGTAAGGAATAGGAATCAGGCTTTGGTTTCACAAATTAATGCCAGTTTCTTTATCGGTCAGAGATGAATCTAAATCAATTTCATATTCGTAAGAGTTCGTAAGAGAAAGAGCGAAGTAGGAAAGATCAGAAGATTCAGAGTAGACTCCTTCTTCCGACCTATATATAATAGAATTCGTTTAGCAATCCTTCGGCGAGCTTTCCTGCAGGTTTAAAGCTTCTGTTCGCCTACTATCAATTACACATTCGTATCTGCTGAGAAATAGAATAGGCTTTTTTAGCTCATTTCTCAGTCACCTGATTTGGCACCAGCCAAAGGAGTACTGTTCATATTTCGGCTAGTGACGGGGGTGTGATCAAGTCAAAGACTTAGCGCTAAAGCACCTTCGCTCCTATCCTTTAAGTCGACTCTAGTGGACTCTGAGCTTATAAGTCGGTTCGAATAAAAGCCTGTCAGAGAATTGTCAAAAGTCAGATTTTCCCAGAAGTTGCCGATCGAGGATAATGCAATGAGGTGTTTTCTAATGTAATGATCATTCCAAGATTTCCAATATTTAAATAGAAGTACAATCTACTAAAAGAGTCAGAACACTAGTGAACCAGTCTTGAGAATTGGGACTTGGATCCTTCGTAAAGAAGAACAAGCGAAACGATACCTAGATTCGGCTGGGAAACAACAATGTTGCTTAGGTTACATTGGAAATAAGTACTAAATGAAACCATTTTCTTCTATTTTCCACTAAGTCAGCTTGCCCCATGAGACAATGGACGCTTTCCATTCCTTCCTCTTTTTCTTGCTTAGTTGGCTACTCTCATCCCTGAATTCAAGTGTGTTGGCCTAGGTTCTTGGCTGCACAACCTCACATGCTCTATGGACTTCCCTAGAAGAGGGTGTTTGCTTCTATCTAAGTCAAGAGCAAGAATATTGAAACTTCGCCTTCTATTAGAGACCAAAAAGAAAGAAAGGCTCTATCTCAATGACGGATTATCTCCAAAAAGAAAAAGCATCGCGAATAATCTATCTGCAATCTTCGTGAACTCTCAGAATAATGGTCGTAGATGTGGTCGTGGACGTGGTAACTCTGTTCTTGGCCACCTCCCTCCTCCTTTCTTTCTATGCTCCTCAAGGCTCTGATCAAGACCTTTGCCTGCTCCGGTGTAGTGTAAGCTATGTTTTCAATTCTTTCATACTGCTCGCGAATGTCAACAGCATAAGAAGCAAGCCTTTTATACAGATCAGTTCTCTCTCCCAAGGTCAATCTCTTTTTGAAGTTTGAAGGTGGAGTTTCCATTCCGAAGTTTACATATACGGATCAACTGCTCTCGGCTCGGAGAAGTTCATGCTTGATCATGCTTGATCTGAACGCCCTTACGAGGTAGTTGGGTTGGAGGATGAAAGCCGTTTTTTTCTTGCAGGACTACAAAAGAGAGGTAATTCTCTAAAAAAGAACAGAAAGGAATGACTATCTATAAAGAGAGAGGCTTGCACAGACATCCCGAGGGTAAAGAAAGAGATTAGACAGACCGTCCCTTTGAACTCAAACAAAGATCAGACGTCGATTAGCCAAGAATCTCAATCGAAAGTAAGATCTTCTTCCAACAGTTCTCTCTTTCTCTTTTAGTCACAGAAAGCACATCTAAAGAGAAGAAAAAGAAAGTAAGATGAATCTAGTATAGTCAGACTCTTTTTCGTTTTCTATTGTCGGTATCCTAAGATCTCTTGACTAAGTCATTTCACACTAAGCACTGAGAACAAGGGACTGATCCCGTACCGTGCTACTGCCTTGATCTAGGATTAGGATTTCATTTTCTTTCTACGTTTTTTCACATCTGCTTCCGCAGAATCTTTTTCAAGATCTGTTTTTTGGTTTGATAAAACTGAGCCACGATTCTTTTCGTCCACAACTTCCTTTTTTCCTTTATTTCCATTTTCGAATTCAAGAGGTTTTTTCTTCGCTGATATTAAAGGAGATCCTTTTTTCTTTCCAATTCGTTTTTCATTTTCTCGACTGTAAAGGACAGGTGAATGAGCGAAGCAAGCAGTGAGACCAATAGAATAGGTGAAGGAGCGAAGACGCTCGAACATCCTTTAATTTTCTTTGACCTTGTGTTGAAATAAATAGGGAGAGGACAGAAGGAGAATGAATCTTGAGTCTTGACTTGCAAATTACCTAAAAAATGAAACTTGACAGTTATATGGAGAATGAAATGAAAGATGAATGAGACTGAACAGGAAGGAAAGAATAGAAATGAAACTTGACAGTGATAGGGAATGAAAGATTCATTCTTGATCTTCTCCTTCCCCTATGGATTCTTGAACTGTAAAAGATCAATACTCATTCACCTTCTTTCACTCTTTTCCCTGTAAAGACCATGAATTCTAAAATGCTATCCTCTGTCTATTTTTTGGGATAAAACCCCTGATTTCTCAAGATTTTATGCCATTTTTGGACATTTTCCCGGTATTTAGGGCCATTTTCCCTGATTTCACTCTTTTTCGTGTAAAGATCATTAATTTTGAAAATCTATCCTTTGTCTATTTTTTGGGATATTTTTTAGTATAGGTAATTAACTATTAAGTCAAGACTCAACAAGAAGAAATGAATTAGCTGCTTTCCTCCCCTTCACCTTTAATGAGCGAAAGAGAAAGAAAAGAAAGAAAAGAGACCAATAGAATAGAATAGGTTAAATCACGGACAGGATTGAATATGCTTTAGTGAAATCAGTCTTTCATATGCTTAACTAGAAACGAACTCCAGGGACAGGAAAGAAAAGAGACCGAGGTTACAGTGTTTGAACGGAGAAGAGAAAGAAAGAGAAGCGACTGAATCGATATGACCTTGCCTTATTTTATGACCTTGCCTTATTTCAGGAGGTAAAGCTAGAAGAAGAAGATATTCCTTCGGCTAAACCTTCCCCAATATTACCTGACCGGAGTGATTGAAGGAGGTAAACTCGGCGAGCAGCTTCGCACCTTTCGGATGAATTATCCTGTAAAGACCATTAATCAAAAAACTCTATCTTCTGTCTATTTTTTGGGATATTTTAGGCCGAGGTAATGCAGAAGTCAAGACTCAACTCTCGATGAATTATCCTTCAACTTGTCCTTGATTGAACTCGGTAAAGCAGCTTCTCTCCTGAACTTATTTATTCACTGTAAAGTGGCTTCGCCCCTGAACCTGATGTCCCTTCCCTATTTATTCCTTCAAACACGAGGTAAAGAAGTCGCTAATTCATTGACTATCCCTTCACTATCAAAGAAAGAAAAGATAATTGATTGAAGAAGAAAATTCAAGCAAAAGATTGAAAAGAAGAAGAACCCAAAAAAGAGCTACTTCACCTTCAGCTATTTCTTCTTGAACTATAAACAAGGATCAATACTCCTATTTATTCATTCTCCTGAACCTCGTAAACAAGGAAAGACTCAAGATTAATGAGACTGAACTCGCATATTCAATCCTTCACTCCTGAACCTATCGGTTTCACAAGCACTAAGTTTAAGTCAGTTCTTCCCCTTCACCTTTACAACTCGGTTTCACAATTCCATTGCCTGCCCCGATATTACCTGACCTGATTGAAGGGTAAAGGTATTTTACCATCTCTTTGCTTTCCTTTGATTCTGCTTGAAAGACTCTTCAAATGAAAGAAAGATTTGCTCCTGAACCTGATTTCACTCCTTCCTTCACCTTTACAGGGAACAAAAGAATAAGACTTCAAAGACTCGGTAAAACTATTAACCTAAACCTCTATTACCTTCAGTTATGGTTCGTTATTCTCAGTTATTGTGAGTTATTATCAGTTCTAGTTTGTTATTCTTTCACAAGGTAAATAGGTGAAGTAGCTTTTTCTTTTCTTTCACTCGGTCTCGCTATTTTCTTGTCCTTTACAGTCTCAAATATTCAATCCTCTCCTCTTCTCTTCTCGTCTCACAGCTTCTCTCCTCGCTTTTGTTCAATTATAAATAAATAACCATTTTGATGGAGATTTGTAGCATCATTCAAGTAAATACAGATTGAGATCGTAG

mRNA sequence

ATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGGTATGGAAGTTATGTATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTACTGTTGAACATCATTCAAGTAAATACAGATTGAGATCGTAG

Coding sequence (CDS)

ATGATTGTATTCCAAGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCCGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAATCTTGGTATGGAAGTTATGTATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTACTGTTGAACATCATTCAAGTAAATACAGATTGAGATCGTAG

Protein sequence

MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVEHHSSKYRLRS
Homology
[Close]
BLAST of CmaCh04G019640 vs. Swiss-Prot
Match: PSBA_CHLVU (Photosystem II protein D1 OS=Chlorella vulgaris GN=psbA PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 9.8e-83
Identity = 156/165 (94.55%), Postives = 157/165 (95.15%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLA VE
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAVVE 347

[Close]
BLAST of CmaCh04G019640 vs. Swiss-Prot
Match: PSBA_HORVU (Photosystem II protein D1 OS=Hordeum vulgare GN=psbA PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 9.8e-83
Identity = 156/165 (94.55%), Postives = 157/165 (95.15%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLA VE
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE 347

[Close]
BLAST of CmaCh04G019640 vs. Swiss-Prot
Match: PSBA_WHEAT (Photosystem II protein D1 OS=Triticum aestivum GN=psbA PE=3 SV=2)

HSP 1 Score: 307.4 bits (786), Expect = 9.8e-83
Identity = 156/165 (94.55%), Postives = 157/165 (95.15%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLA VE
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE 347

[Close]
BLAST of CmaCh04G019640 vs. Swiss-Prot
Match: PSBA_SECCE (Photosystem II protein D1 OS=Secale cereale GN=psbA PE=1 SV=3)

HSP 1 Score: 307.4 bits (786), Expect = 9.8e-83
Identity = 156/165 (94.55%), Postives = 157/165 (95.15%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLA VE
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE 347

[Close]
BLAST of CmaCh04G019640 vs. Swiss-Prot
Match: PSBA_ACUOB (Photosystem II protein D1 OS=Acutodesmus obliquus GN=psbA PE=1 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 1.3e-82
Identity = 155/165 (93.94%), Postives = 158/165 (95.76%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRV+NTWADIINRANLGMEVM+ERNAHNFPLDLA+VE
Sbjct: 303 NQSVVDSQGRVLNTWADIINRANLGMEVMHERNAHNFPLDLASVE 347

[Close]
BLAST of CmaCh04G019640 vs. TrEMBL
Match: B7T3C5_9ROSI (Photosystem II protein D1 OS=Geranium macrorrhizum GN=psbA PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.4e-81
Identity = 157/168 (93.45%), Postives = 159/168 (94.64%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVEHHS 162
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLATVE  S
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLATVEVQS 350

[Close]
BLAST of CmaCh04G019640 vs. TrEMBL
Match: A0A162BH03_GLOSU (Photosystem II Q(B) protein (D1) OS=Gloriosa superba GN=psbA PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.4e-81
Identity = 157/170 (92.35%), Postives = 160/170 (94.12%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVEHHSSK 164
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLA VE  S+K
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTK 352

[Close]
BLAST of CmaCh04G019640 vs. TrEMBL
Match: A0A142CRU5_9LILI (Photosystem II protein D1 OS=Sagittaria lichuanensis GN=psbA PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.4e-81
Identity = 157/170 (92.35%), Postives = 160/170 (94.12%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVEHHSSK 164
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLA VE  S+K
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTK 352

[Close]
BLAST of CmaCh04G019640 vs. TrEMBL
Match: D5MAN5_LATSA (Photosystem II protein D1 OS=Lathyrus sativus GN=psbA PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.4e-81
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLATVE
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLATVE 347

[Close]
BLAST of CmaCh04G019640 vs. TrEMBL
Match: A0A0K1ZW05_9ASTR (Photosystem II protein D1 (Fragment) OS=Goodenia pinifolia GN=psbA PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 8.3e-81
Identity = 156/170 (91.76%), Postives = 160/170 (94.12%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVEHHSSK 164
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLA +E  S+K
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTK 352

[Close]
BLAST of CmaCh04G019640 vs. TAIR10
Match: ATCG00020.1 (ATCG00020.1 photosystem II reaction center protein A)

HSP 1 Score: 306.2 bits (783), Expect = 1.2e-83
Identity = 156/169 (92.31%), Postives = 159/169 (94.08%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVEHHSS 163
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLA VE  S+
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPST 351

[Close]
BLAST of CmaCh04G019640 vs. TAIR10
Match: ATCG00270.1 (ATCG00270.1 photosystem II reaction center protein D)

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-13
Identity = 44/130 (33.85%), Postives = 70/130 (53.85%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           ++ FQ  HN  ++PFHM+GVAGV G +L  A+HG+ V ++L  E  +  +    +   Q 
Sbjct: 183 ILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQA 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGISTMAFNLNGFNFNQSVVDS 120
           EETY++V A+ ++ ++     +F+N R LHFF+   PV G+   A  + G   N    D 
Sbjct: 243 EETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 302

Query: 121 QGRVINTWAD 131
             + I    D
Sbjct: 303 VSQEIRAAED 309

[Close]
BLAST of CmaCh04G019640 vs. NCBI nr
Match: gi|295136901|ref|YP_003587733.1| (photosystem II protein D1 [Lathyrus sativus])

HSP 1 Score: 308.1 bits (788), Expect = 9.2e-81
Identity = 156/165 (94.55%), Postives = 158/165 (95.76%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVE 159
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLATVE
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLATVE 347

[Close]
BLAST of CmaCh04G019640 vs. NCBI nr
Match: gi|1016471042|ref|YP_009241896.1| (photosystem II protein D1 (plastid) [Sagittaria lichuanensis])

HSP 1 Score: 308.1 bits (788), Expect = 9.2e-81
Identity = 157/170 (92.35%), Postives = 160/170 (94.12%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVEHHSSK 164
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLA VE  S+K
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTK 352

[Close]
BLAST of CmaCh04G019640 vs. NCBI nr
Match: gi|197132088|gb|ACH47562.1| (photosystem II protein D1 [Geranium macrorrhizum])

HSP 1 Score: 308.1 bits (788), Expect = 9.2e-81
Identity = 157/168 (93.45%), Postives = 159/168 (94.64%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVEHHS 162
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLATVE  S
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLATVEVQS 350

[Close]
BLAST of CmaCh04G019640 vs. NCBI nr
Match: gi|806461426|gb|AKB92993.1| (photosystem II Q(b) protein (D1) (chloroplast) [Gloriosa superba])

HSP 1 Score: 308.1 bits (788), Expect = 9.2e-81
Identity = 157/170 (92.35%), Postives = 160/170 (94.12%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVEHHSSK 164
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLA VE  S+K
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTK 352

[Close]
BLAST of CmaCh04G019640 vs. NCBI nr
Match: gi|916440265|gb|AKZ22837.1| (photosystem II protein D1 (plastid) [Evolvulus nuttallianus])

HSP 1 Score: 307.8 bits (787), Expect = 1.2e-80
Identity = 156/169 (92.31%), Postives = 160/169 (94.67%), Query Frame = 1 

Query: 1   MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFGQE 60
           MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FGQE
Sbjct: 183 MIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQE 242

Query: 61  EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV-------GISTMAFNLNGFNF 120
           EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV       GISTMAFNLNGFNF
Sbjct: 243 EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302

Query: 121 NQSVVDSQGRVINTWADIINRANLGMEVMYERNAHNFPLDLATVEHHSS 163
           NQSVVDSQGRVINTWADIINRANLGMEVM+ERNAHNFPLDLAT+E  S+
Sbjct: 303 NQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLATIEAPST 351

The following BLAST results are available for this feature:
BLAST of CmaCh04G019640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSBA_CHLVU9.8e-8394.55Photosystem II protein D1 OS=Chlorella vulgaris GN=psbA PE=3 SV=1[more]
PSBA_HORVU9.8e-8394.55Photosystem II protein D1 OS=Hordeum vulgare GN=psbA PE=3 SV=1[more]
PSBA_WHEAT9.8e-8394.55Photosystem II protein D1 OS=Triticum aestivum GN=psbA PE=3 SV=2[more]
PSBA_SECCE9.8e-8394.55Photosystem II protein D1 OS=Secale cereale GN=psbA PE=1 SV=3[more]
PSBA_ACUOB1.3e-8293.94Photosystem II protein D1 OS=Acutodesmus obliquus GN=psbA PE=1 SV=1[more]
BLAST of CmaCh04G019640 vs. TrEMBL
Match NameE-valueIdentityDescription
B7T3C5_9ROSI6.4e-8193.45Photosystem II protein D1 OS=Geranium macrorrhizum GN=psbA PE=3 SV=1[more]
A0A162BH03_GLOSU6.4e-8192.35Photosystem II Q(B) protein (D1) OS=Gloriosa superba GN=psbA PE=4 SV=1[more]
A0A142CRU5_9LILI6.4e-8192.35Photosystem II protein D1 OS=Sagittaria lichuanensis GN=psbA PE=3 SV=1[more]
D5MAN5_LATSA6.4e-8194.55Photosystem II protein D1 OS=Lathyrus sativus GN=psbA PE=3 SV=1[more]
A0A0K1ZW05_9ASTR8.3e-8191.76Photosystem II protein D1 (Fragment) OS=Goodenia pinifolia GN=psbA PE=3 SV=1[more]
BLAST of CmaCh04G019640 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00020.11.2e-8392.31ATCG00020.1 photosystem II reaction center protein A[more]
ATCG00270.11.8e-1333.85ATCG00270.1 photosystem II reaction center protein D[more]
BLAST of CmaCh04G019640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|295136901|ref|YP_003587733.1|9.2e-8194.55photosystem II protein D1 [Lathyrus sativus][more]
gi|1016471042|ref|YP_009241896.1|9.2e-8192.35photosystem II protein D1 (plastid) [Sagittaria lichuanensis][more]
gi|197132088|gb|ACH47562.1|9.2e-8193.45photosystem II protein D1 [Geranium macrorrhizum][more]
gi|806461426|gb|AKB92993.1|9.2e-8192.35photosystem II Q(b) protein (D1) (chloroplast) [Gloriosa superba][more]
gi|916440265|gb|AKZ22837.1|1.2e-8092.31photosystem II protein D1 (plastid) [Evolvulus nuttallianus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000484Photo_RC_L/M
Vocabulary: Biological Process
TermDefinition
GO:0019684photosynthesis, light reaction
GO:0009772photosynthetic electron transport in photosystem II
Vocabulary: Molecular Function
TermDefinition
GO:0045156electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009772 photosynthetic electron transport in photosystem II
biological_process GO:0019684 photosynthesis, light reaction
cellular_component GO:0009507 chloroplast
molecular_function GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G019640.1CmaCh04G019640.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000484Photosynthetic reaction centre, L/MGENE3DG3DSA:1.20.85.10coord: 1..123
score: 5.1
IPR000484Photosynthetic reaction centre, L/MPFAMPF00124Photo_RCcoord: 1..138
score: 1.6
IPR000484Photosynthetic reaction centre, L/MPROSITEPS00244REACTION_CENTERcoord: 9..35
scor
IPR000484Photosynthetic reaction centre, L/MunknownSSF81483Bacterial photosystem II reaction centre, L and M subunitscoord: 1..154
score: 3.01
NoneNo IPR availablePANTHERPTHR33149FAMILY NOT NAMEDcoord: 1..158
score: 7.5E
NoneNo IPR availablePANTHERPTHR33149:SF4PHOTOSYSTEM Q(B) PROTEINcoord: 1..158
score: 7.5E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G019640Cucumber (Gy14) v2cgybcmaB670
CmaCh04G019640Melon (DHL92) v3.6.1cmamedB737
CmaCh04G019640Watermelon (97103) v2cmawmbB726
CmaCh04G019640Cucurbita moschata (Rifu)cmacmoB679
CmaCh04G019640Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G019640Watermelon (Charleston Gray)cmawcgB622
CmaCh04G019640Watermelon (97103) v1cmawmB739
CmaCh04G019640Bottle gourd (USVL1VR-Ls)cmalsiB635