CmaCh04G019510 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G019510
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMYB-like transcription factor family protein
LocationCma_Chr04 : 10813965 .. 10814472 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGGCGTTGTTAGACAGTACGTGAGATCCAAAACGCCGCGTTTAAGATGGACTCCTCAACTCCATAACTCCTTCCTTCTTGCCATACAATCCCTCGGTGGCCATCAAAGTAATTCTTCATTTCTTCTTTTTCTTTTTCTTATATATTTATTTTCATTTTTTATATTCTTCTTAGCAGAGGCAACCCCCAAGCTTCTACTTCAGCTGATGGATGTGAAAGGTGTCTCCATATCCCATGTTAAGAGCCATCTCCAGGTCCTCTTCATTTCTGTCAACTTTCATTTATTCTTCTTATTATTATTAATTTTATTTAACGTGTATTGTATTGTATTTGTAGATGTATAGAAGCATGAGAGGCGAGGACGTGAGAAGACATGCTGGTATATTTTGATAATTTTGATTGCATTTGCTGTTGTAGGTTTTGGTATATGTATATAAGTAAGTGAGAGATTGGGGAAATTTGCATTGGTCTCAGAGCCAAAAGCTGGAGGTGGAGAAGGAATGA

mRNA sequence

ATGAGAGGCGTTGTTAGACAGTACGTGAGATCCAAAACGCCGCGTTTAAGATGGACTCCTCAACTCCATAACTCCTTCCTTCTTGCCATACAATCCCTCGGTGGCCATCAAAAGGCAACCCCCAAGCTTCTACTTCAGCTGATGGATGTGAAAGGTGTCTCCATATCCCATGTTAAGAGCCATCTCCAGATGTATAGAAGCATGAGAGGCGAGGACGTGAGAAGACATGCTGTGAGAGATTGGGGAAATTTGCATTGGTCTCAGAGCCAAAAGCTGGAGGTGGAGAAGGAATGA

Coding sequence (CDS)

ATGAGAGGCGTTGTTAGACAGTACGTGAGATCCAAAACGCCGCGTTTAAGATGGACTCCTCAACTCCATAACTCCTTCCTTCTTGCCATACAATCCCTCGGTGGCCATCAAAAGGCAACCCCCAAGCTTCTACTTCAGCTGATGGATGTGAAAGGTGTCTCCATATCCCATGTTAAGAGCCATCTCCAGATGTATAGAAGCATGAGAGGCGAGGACGTGAGAAGACATGCTGTGAGAGATTGGGGAAATTTGCATTGGTCTCAGAGCCAAAAGCTGGAGGTGGAGAAGGAATGA

Protein sequence

MRGVVRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHLQMYRSMRGEDVRRHAVRDWGNLHWSQSQKLEVEKE
Homology
[Close]
BLAST of CmaCh04G019510 vs. Swiss-Prot
Match: MYBF_ARATH (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana GN=At1g14600 PE=2 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 1.0e-20
Identity = 47/67 (70.15%), Postives = 55/67 (82.09%), Query Frame = 1 

Query: 3  GVVRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHL 62
          G VR YVRS  PRLRWTP+LH SF+ A+  LGG  KATPKL+L++MDVKG++ISHVKSHL
Sbjct: 13 GGVRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHL 72

Query: 63 QMYRSMR 70
          QMYR  R
Sbjct: 73 QMYRGSR 79

[Close]
BLAST of CmaCh04G019510 vs. Swiss-Prot
Match: ROLL9_ORYSJ (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica GN=RL9 PE=2 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 3.9e-15
Identity = 34/61 (55.74%), Postives = 50/61 (81.97%), Query Frame = 1 

Query: 12  KTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHLQMYRSMRGE 71
           + PR+RWT  LH  F+ A++ LGGH++ATPK +L+LMDVK ++++HVKSHLQMYR+++  
Sbjct: 323 RAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKST 382

Query: 72  D 73
           D
Sbjct: 383 D 383

[Close]
BLAST of CmaCh04G019510 vs. Swiss-Prot
Match: KAN2_ARATH (Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 6.6e-15
Identity = 34/61 (55.74%), Postives = 50/61 (81.97%), Query Frame = 1 

Query: 12  KTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHLQMYRSMRGE 71
           + PR+RWT  LH  F+ A++ LGGH++ATPK +L+LMDVK ++++HVKSHLQMYR+++  
Sbjct: 212 RAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTT 271

Query: 72  D 73
           D
Sbjct: 272 D 272

[Close]
BLAST of CmaCh04G019510 vs. Swiss-Prot
Match: KAN1_ARATH (Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-14
Identity = 33/58 (56.90%), Postives = 49/58 (84.48%), Query Frame = 1 

Query: 12  KTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHLQMYRSMR 70
           + PR+RWT  LH  F+ A++ LGGH++ATPK +L+LMDVK ++++HVKSHLQMYR+++
Sbjct: 218 RAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 275

[Close]
BLAST of CmaCh04G019510 vs. Swiss-Prot
Match: KAN4_ARATH (Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.5e-14
Identity = 34/61 (55.74%), Postives = 50/61 (81.97%), Query Frame = 1 

Query: 12  KTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHLQMYRSMRGE 71
           + PR+RWT  LH  F+ A+Q LGGH++ATPK +L+LM+VK ++++HVKSHLQMYR+++  
Sbjct: 104 RAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKCT 163

Query: 72  D 73
           D
Sbjct: 164 D 164

[Close]
BLAST of CmaCh04G019510 vs. TrEMBL
Match: A0A072TFN8_MEDTR (Myb-like DNA-binding domain, shaqkyf class protein OS=Medicago truncatula GN=MTR_0223s0040 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 7.6e-26
Identity = 57/73 (78.08%), Postives = 67/73 (91.78%), Query Frame = 1 

Query: 3  GVVRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHL 62
          GVVRQYVRSK PRLRWTP+LH  F+ AI++LGGHQKATPKL+LQLMDVKG++ISHVKSHL
Sbjct: 8  GVVRQYVRSKVPRLRWTPELHRCFVYAIETLGGHQKATPKLVLQLMDVKGLTISHVKSHL 67

Query: 63 QMYRSMRGEDVRR 76
          QMYRSMRG+  ++
Sbjct: 68 QMYRSMRGDSCKQ 80

[Close]
BLAST of CmaCh04G019510 vs. TrEMBL
Match: V7BAB2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G019900g PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.8e-25
Identity = 56/69 (81.16%), Postives = 64/69 (92.75%), Query Frame = 1 

Query: 3  GVVRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHL 62
          G VRQY+RSK PRLRWTP+LH  F+ AI+SLGGHQKATPKL+LQLMDVKG++ISHVKSHL
Sbjct: 8  GAVRQYIRSKVPRLRWTPELHRCFVHAIESLGGHQKATPKLVLQLMDVKGLTISHVKSHL 67

Query: 63 QMYRSMRGE 72
          QMYRSMRG+
Sbjct: 68 QMYRSMRGD 76

[Close]
BLAST of CmaCh04G019510 vs. TrEMBL
Match: V7C4Q1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G008400g PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.8e-25
Identity = 55/73 (75.34%), Postives = 66/73 (90.41%), Query Frame = 1 

Query: 3  GVVRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHL 62
          GVVRQY+RSK PRLRWTP+LH  F+ AI++LGGH KATPKL+LQLMDVKG++ISHVKSHL
Sbjct: 8  GVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHHKATPKLVLQLMDVKGLTISHVKSHL 67

Query: 63 QMYRSMRGEDVRR 76
          QMYRSM+G+  R+
Sbjct: 68 QMYRSMKGDSCRQ 80

[Close]
BLAST of CmaCh04G019510 vs. TrEMBL
Match: K7N0L3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G006000 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.8e-25
Identity = 55/73 (75.34%), Postives = 66/73 (90.41%), Query Frame = 1 

Query: 3  GVVRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHL 62
          GVVRQY+RSK PRLRWTP+LH  F+ AI++LGGH KATPKL+LQLMDVKG++ISHVKSHL
Sbjct: 8  GVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHHKATPKLVLQLMDVKGLTISHVKSHL 67

Query: 63 QMYRSMRGEDVRR 76
          QMYRSM+G+  R+
Sbjct: 68 QMYRSMKGDSCRQ 80

[Close]
BLAST of CmaCh04G019510 vs. TrEMBL
Match: A0A0S3T178_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G011200 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.8e-25
Identity = 55/73 (75.34%), Postives = 66/73 (90.41%), Query Frame = 1 

Query: 3  GVVRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHL 62
          GVVRQY+RSK PRLRWTP+LH  F+ AI++LGGH KATPKL+LQLMDVKG++ISHVKSHL
Sbjct: 8  GVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHHKATPKLVLQLMDVKGLTISHVKSHL 67

Query: 63 QMYRSMRGEDVRR 76
          QMYRSM+G+  R+
Sbjct: 68 QMYRSMKGDSCRQ 80

[Close]
BLAST of CmaCh04G019510 vs. TAIR10
Match: AT2G40260.1 (AT2G40260.1 Homeodomain-like superfamily protein)

HSP 1 Score: 102.4 bits (254), Expect = 1.6e-22
Identity = 48/70 (68.57%), Postives = 59/70 (84.29%), Query Frame = 1 

Query: 3   GVVRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHL 62
           G VR Y RSKTPRLRWTP+LH  FL A++ LGG  +ATPKL+LQLM+VKG+SI+HVKSHL
Sbjct: 72  GSVRPYNRSKTPRLRWTPELHICFLQAVERLGGPDRATPKLVLQLMNVKGLSIAHVKSHL 131

Query: 63  QMYRSMRGED 73
           QMYRS + ++
Sbjct: 132 QMYRSKKTDE 141

[Close]
BLAST of CmaCh04G019510 vs. TAIR10
Match: AT1G14600.1 (AT1G14600.1 Homeodomain-like superfamily protein)

HSP 1 Score: 100.5 bits (249), Expect = 5.9e-22
Identity = 47/67 (70.15%), Postives = 55/67 (82.09%), Query Frame = 1 

Query: 3  GVVRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHL 62
          G VR YVRS  PRLRWTP+LH SF+ A+  LGG  KATPKL+L++MDVKG++ISHVKSHL
Sbjct: 13 GGVRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHL 72

Query: 63 QMYRSMR 70
          QMYR  R
Sbjct: 73 QMYRGSR 79

[Close]
BLAST of CmaCh04G019510 vs. TAIR10
Match: AT2G42660.1 (AT2G42660.1 Homeodomain-like superfamily protein)

HSP 1 Score: 99.0 bits (245), Expect = 1.7e-21
Identity = 46/71 (64.79%), Postives = 58/71 (81.69%), Query Frame = 1 

Query: 5   VRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHLQM 64
           VRQY+RS  PRLRWTP LH SF+ A+Q LGG  +ATPKL+L++M++KG+SI+HVKSHLQM
Sbjct: 42  VRQYIRSNMPRLRWTPDLHLSFVRAVQRLGGPDRATPKLVLEMMNLKGLSIAHVKSHLQM 101

Query: 65  YRSMRGEDVRR 76
           YRS + E   R
Sbjct: 102 YRSKKLEPSSR 112

[Close]
BLAST of CmaCh04G019510 vs. TAIR10
Match: AT2G38300.1 (AT2G38300.1 myb-like HTH transcriptional regulator family protein)

HSP 1 Score: 98.2 bits (243), Expect = 2.9e-21
Identity = 44/68 (64.71%), Postives = 57/68 (83.82%), Query Frame = 1 

Query: 5   VRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHLQM 64
           VR YVRSK PRLRWTP LH  F+ A++ LGG ++ATPKL+ Q+M++KG+SI+HVKSHLQM
Sbjct: 46  VRPYVRSKVPRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVKSHLQM 105

Query: 65  YRSMRGED 73
           YRS + +D
Sbjct: 106 YRSKKIDD 113

[Close]
BLAST of CmaCh04G019510 vs. TAIR10
Match: AT2G02060.1 (AT2G02060.1 Homeodomain-like superfamily protein)

HSP 1 Score: 95.1 bits (235), Expect = 2.5e-20
Identity = 43/62 (69.35%), Postives = 52/62 (83.87%), Query Frame = 1 

Query: 5  VRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHLQM 64
          VR YVRS  PRLRWTP LH  F+ A++ LGG  +ATPKL+L++MDVKG++ISHVKSHLQM
Sbjct: 21 VRPYVRSPVPRLRWTPDLHRCFVHAVEILGGQHRATPKLVLKMMDVKGLTISHVKSHLQM 80

Query: 65 YR 67
          YR
Sbjct: 81 YR 82

[Close]
BLAST of CmaCh04G019510 vs. NCBI nr
Match: gi|922325843|ref|XP_013442314.1| (myb-like DNA-binding domain, shaqkyf class protein [Medicago truncatula])

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-25
Identity = 57/73 (78.08%), Postives = 67/73 (91.78%), Query Frame = 1 

Query: 3  GVVRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHL 62
          GVVRQYVRSK PRLRWTP+LH  F+ AI++LGGHQKATPKL+LQLMDVKG++ISHVKSHL
Sbjct: 8  GVVRQYVRSKVPRLRWTPELHRCFVYAIETLGGHQKATPKLVLQLMDVKGLTISHVKSHL 67

Query: 63 QMYRSMRGEDVRR 76
          QMYRSMRG+  ++
Sbjct: 68 QMYRSMRGDSCKQ 80

[Close]
BLAST of CmaCh04G019510 vs. NCBI nr
Match: gi|965613136|dbj|BAT98768.1| (hypothetical protein VIGAN_10011200 [Vigna angularis var. angularis])

HSP 1 Score: 122.1 bits (305), Expect = 5.4e-25
Identity = 55/73 (75.34%), Postives = 66/73 (90.41%), Query Frame = 1 

Query: 3  GVVRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHL 62
          GVVRQY+RSK PRLRWTP+LH  F+ AI++LGGH KATPKL+LQLMDVKG++ISHVKSHL
Sbjct: 8  GVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHHKATPKLVLQLMDVKGLTISHVKSHL 67

Query: 63 QMYRSMRGEDVRR 76
          QMYRSM+G+  R+
Sbjct: 68 QMYRSMKGDSCRQ 80

[Close]
BLAST of CmaCh04G019510 vs. NCBI nr
Match: gi|571563271|ref|XP_006605454.1| (PREDICTED: putative Myb family transcription factor At1g14600 [Glycine max])

HSP 1 Score: 122.1 bits (305), Expect = 5.4e-25
Identity = 55/73 (75.34%), Postives = 66/73 (90.41%), Query Frame = 1 

Query: 3  GVVRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHL 62
          GVVRQY+RSK PRLRWTP+LH  F+ AI++LGGH KATPKL+LQLMDVKG++ISHVKSHL
Sbjct: 8  GVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHHKATPKLVLQLMDVKGLTISHVKSHL 67

Query: 63 QMYRSMRGEDVRR 76
          QMYRSM+G+  R+
Sbjct: 68 QMYRSMKGDSCRQ 80

[Close]
BLAST of CmaCh04G019510 vs. NCBI nr
Match: gi|658010565|ref|XP_008340525.1| (PREDICTED: putative Myb family transcription factor At1g14600 isoform X2 [Malus domestica])

HSP 1 Score: 122.1 bits (305), Expect = 5.4e-25
Identity = 57/73 (78.08%), Postives = 65/73 (89.04%), Query Frame = 1 

Query: 3  GVVRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHL 62
          G VRQYVRSK PRLRWTP+LH  FL AI+ LGGH+KATPKL+LQLMDVKG++ISHVKSHL
Sbjct: 11 GAVRQYVRSKVPRLRWTPELHRCFLQAIERLGGHKKATPKLVLQLMDVKGLTISHVKSHL 70

Query: 63 QMYRSMRGEDVRR 76
          QMYRSMRG+ + R
Sbjct: 71 QMYRSMRGDPIIR 83

[Close]
BLAST of CmaCh04G019510 vs. NCBI nr
Match: gi|951048693|ref|XP_014519772.1| (PREDICTED: putative Myb family transcription factor At1g14600 [Vigna radiata var. radiata])

HSP 1 Score: 122.1 bits (305), Expect = 5.4e-25
Identity = 55/73 (75.34%), Postives = 66/73 (90.41%), Query Frame = 1 

Query: 3  GVVRQYVRSKTPRLRWTPQLHNSFLLAIQSLGGHQKATPKLLLQLMDVKGVSISHVKSHL 62
          GVVRQY+RSK PRLRWTP+LH  F+ AI++LGGH KATPKL+LQLMDVKG++ISHVKSHL
Sbjct: 8  GVVRQYIRSKVPRLRWTPELHRCFVYAIETLGGHHKATPKLVLQLMDVKGLTISHVKSHL 67

Query: 63 QMYRSMRGEDVRR 76
          QMYRSM+G+  R+
Sbjct: 68 QMYRSMKGDSCRQ 80

The following BLAST results are available for this feature:
BLAST of CmaCh04G019510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYBF_ARATH1.0e-2070.15Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana GN=At... [more]
ROLL9_ORYSJ3.9e-1555.74Probable transcription factor RL9 OS=Oryza sativa subsp. japonica GN=RL9 PE=2 SV... [more]
KAN2_ARATH6.6e-1555.74Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2 PE=2 SV=1[more]
KAN1_ARATH1.1e-1456.90Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1 SV=1[more]
KAN4_ARATH1.5e-1455.74Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4 PE=1 SV=1[more]
BLAST of CmaCh04G019510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A072TFN8_MEDTR7.6e-2678.08Myb-like DNA-binding domain, shaqkyf class protein OS=Medicago truncatula GN=MTR... [more]
V7BAB2_PHAVU3.8e-2581.16Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G019900g PE=4 SV=1[more]
V7C4Q1_PHAVU3.8e-2575.34Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G008400g PE=4 SV=1[more]
K7N0L3_SOYBN3.8e-2575.34Uncharacterized protein OS=Glycine max GN=GLYMA_20G006000 PE=4 SV=1[more]
A0A0S3T178_PHAAN3.8e-2575.34Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G011200 PE=... [more]
BLAST of CmaCh04G019510 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G40260.11.6e-2268.57 Homeodomain-like superfamily protein[more]
AT1G14600.15.9e-2270.15 Homeodomain-like superfamily protein[more]
AT2G42660.11.7e-2164.79 Homeodomain-like superfamily protein[more]
AT2G38300.12.9e-2164.71 myb-like HTH transcriptional regulator family protein[more]
AT2G02060.12.5e-2069.35 Homeodomain-like superfamily protein[more]
BLAST of CmaCh04G019510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|922325843|ref|XP_013442314.1|1.1e-2578.08myb-like DNA-binding domain, shaqkyf class protein [Medicago truncatula][more]
gi|965613136|dbj|BAT98768.1|5.4e-2575.34hypothetical protein VIGAN_10011200 [Vigna angularis var. angularis][more]
gi|571563271|ref|XP_006605454.1|5.4e-2575.34PREDICTED: putative Myb family transcription factor At1g14600 [Glycine max][more]
gi|658010565|ref|XP_008340525.1|5.4e-2578.08PREDICTED: putative Myb family transcription factor At1g14600 isoform X2 [Malus ... [more]
gi|951048693|ref|XP_014519772.1|5.4e-2575.34PREDICTED: putative Myb family transcription factor At1g14600 [Vigna radiata var... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006447Myb_dom_plants
IPR009057Homeobox-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G019510.1CmaCh04G019510.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006447Myb domain, plantsTIGRFAMsTIGR01557TIGR01557coord: 14..67
score: 1.1
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 10..68
score: 5.9
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 11..68
score: 6.81
NoneNo IPR availablePANTHERPTHR31314FAMILY NOT NAMEDcoord: 2..75
score: 8.3
NoneNo IPR availablePANTHERPTHR31314:SF10HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 2..75
score: 8.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G019510Watermelon (97103) v2cmawmbB726
CmaCh04G019510Cucurbita maxima (Rimu)cmacmaB550
CmaCh04G019510Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G019510Watermelon (Charleston Gray)cmawcgB622
CmaCh04G019510Watermelon (97103) v1cmawmB739
CmaCh04G019510Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G019510Bottle gourd (USVL1VR-Ls)cmalsiB635
CmaCh04G019510Cucumber (Gy14) v2cgybcmaB670
CmaCh04G019510Melon (DHL92) v3.6.1cmamedB737