CmaCh04G019420 (gene) Cucurbita maxima (Rimu)

NameCmaCh04G019420
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionLysosomal Pro-X carboxypeptidase, putative
LocationCma_Chr04 : 10589179 .. 10593211 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCCAAGGCTTCACTAGGTCACCACCTATTATGGAGGCCATGCATGCACTACAACCACCTCTCTCTTTTTCTTTATTTTTGAAATTACTATAACTGCCCAAATCTATAGTAGTTATGGTTGTTTTTTTTATAATTATTTTTTTCTCGCTTCCCCTCAAAATTTTTAAAACTACATCGTTACAAAGAATGTTTTGTTCTCCTCCCTAACTAATGTGGGATCTCACAATCCAACCCCTCCCCCAGGGCCAGCGTCTTCGTTGGCACTCATTCCCTTCTCCAATCGATGTGGGATTCCACAATCCGCTCCACCCTCGAGGCCCAGCGTCCTCGCTAGCACTCGTTCCCTTATCCAACCGATGTGAGATCCCACAATTTACCCCCTCGAGGCCCAATATCCTTGCTAGCACACCGCCTCGTATCCACCCCCCTTCGGGGTTCATCCGACCATTTTGTTAGTGGATCTCACAATCCACTCCCTCGAGACCCAGCGTCCTTACTGGCACACCTCCTTGTATCCACCCCTTTCGGGGCCCACCACTAGCAGATATCATCCTTTTTTGGGTATCCCCTCAAGGTTTTTATACAAGAGAGGTTTCCACACCCTTATAAAGAATGTTTTTTTTCTCCTCACCAACTGATATAAGATCTCACAATCCACCCCCCTCGGGACCCAGCATTCTTGTTGGCACACTGCCTCGTGTCCACCCCCCTTTTCAGGGCTTAACCTCCTTGTAGGCACATCGCCTAATGTCTGGCTCTGATACCATTTGTAACAGTCCAACCCCATCGCTAACATATATTATCCTCTTTGAGCTTTCCCTTTCAAGCTTCACTTCAAGGTTTCTAAAACGCGTCTACTAGGGAGAGGTTTCCACAACCTTATAAAGAATAGTTCATTCTCCTCCCCAACCGACATAGAATCTAACAATATCCTTGTCTCCCTTCAAATTTCAGGACATAGAATCATGTTGGGTTTTATGTCCTAAAACTCATAGTTGGTAAATAAAAACATATTCTATTTTTTCGATAAAGTTGTTATTGATGTTTATTCAGTAAAGATTGTTATTGAATAAAGTGAATTTTACGATCGTTAATCTAAATCCAATAAACTAAGAGTACTCTGGCTATAGTATGATTACTTAAACTATATGTAGAGATAAAAGAGTAGATCAAGTTCATGTATATAGTTAAAATGATCTATAGTACAGAGATAAGGCTGAGTACCTTATCCTGGAGACACTATGGATGCGGCCCACTTTTGTATATGACATAAACAATGTGATCACTAAATTGTACATGCGGAGACATGTGAGTGGGGGCGTCCTATGCAATGAGTATTGCATAAGATCGGACCTGAAGAAAATCACTCCCACTTTATAATGTCATTTACTGTTGAGACTGATTTTCTTTTCATTCGATGACCTTGGTAACTCAATCTTAATCTTGAACTAACCATAAACTTCTGTTTATTCGAAATTATCCTTAGATTTGCATGGGTGAGAGTGGCTCGAGTTCGCCGACTCAATAGGCCTCCCATTTCAGGGGTAAGCTGGGTGAATGGCTGGGGACGTGGGGTGCAAGATGGAATTCGCTCCTACCCACTTTAGGGATAGAAGAGAGGAAGTTTTCTTAAGTACTGACTCCAGGTCTTGAACAAGGGGGCCCACCCTCTAATTGGCCTGAGAGGGATTCGGTTTACTGGTTGGATCACAAACCAATTGTTCATTAGAGGTTCAGTGGGACATAAGGAACAAGAAGTAACTTCAGGGGTAAAATGGTTAATTGACCCAACTTTAGTTACGAACAACTTGTGAAGGATTGACTTACTAATCATGGTTATATCAAATGGACAGAAATATATCTATAGTGAGGGAAGTGCAACTACTAGCCTATAGTGGAGTGTCCTAGTAGTTAACGAGTGTTGGTTAACAAGGTTAATGAGTTTAACCGGTTAATCTTGGATCGTTGGAGCCCATGATCTATAGGTCCATTACGTCCCTCTGCTAGCTCATATCGAACTAAACCATAGAACAGGGTGACGAGTGAGTTCGAAGTGTATGAATTCAAATTAGGGAATATGCGCTACATATATACAATATATTTAACCGCATTTTTGTTTTATTTACGAATTAAACAAAAAGAGAGAATTTGAGATATTTAAATAAGATTTAAATATTTTAATCAAATATACTTCGAAATTGATTGGGATTGACATTTGAATTAATATTAAATATTAATTAAATAGTTTAATTAATTATTTAATATTATTTTAATTTGAAATTAATTATTCAAATTAATTGTTGAATTAAAATGAACGAAAGTCAAATTGTTGACCTCACTTAATGAAAAAATCCATGTTTGAGTTAGTGGAATTTTGAGGTTTCAAAATTTGTTTTAACCAAACTTGCATGCTTGCCAAATAAATCCCACAAATTTGAGCGGAATTTTGACTGTCAAAATTTGGTTAACTCAAACTTGCATGCATGCCACATAATCCCACACGTTTGAGTGGAATTTTGAGTGTCAAAATTAGGTGATCTCATATTTGGATGAACATGCAAACATAACTCTATAAATAGAGTGATCAAGGTACATGAAATTTCTCCTTTGTAAAAACTTTGAGAAAAACTCTCACAAACTCTCTTTTCATATATACGAAATACCTCCCAAGTTTAGTGACTCACCGGATTCCACAATCCTATTCTAAGACCGGAGAATAGTGGAGAAGACACTAGTGGTGGTTCGAAACCGATTCGTGAGAAAAAAGAATTTGAACTACAAAAGGTTTGTACTCAAGCACCTTAAATTTTAATACTTATGAGCATGCTAGTTATTTACTATAATTGATGTTTTAAAAGTGCGTGACATCCACATTGCTTTCACATGAGTTTTACCACTTATAACAGCGGTGGATAAACAAAAACCAAAGCTTCAATATTTATTACACATAAAGAACAATCAACTTTACTTCAACTCTCTCTCTTTTTGTGAATGCAGAGTGTTGCATAACTTATCTGACAGTTTCCTTGCACACCATACGCCTAATGGTTTGATTCAGACTCATAAATTCTAATTTCAAAGCTTTGTTCTTTTGAGCTGACCATGTTTTGAACTTTCCAGGATCTCATTGTTTAGACATTTTACGAACAAATGAAACGGATCCACAGTGGTTGGTGGAACAAAGAGTGACAGAGGTTAACATCATCAAGGGATGGATCAGTAAGTACTATGCTGATCTTGGCCGTCCAAACAATATATAAACAACACATAATGATGATGAAACACTATAAACAGGATATGAAAATCATCCTGACATGTATGCCACTGAAGATGAATTTATGAACTTGTATTGATGTTAGTGTTGAAAACATCCCTTGAATAGTTAAAGCATACTGCTAACAGATATTGTCCGCTTTGACTCGTTACGTATCGTCGTTAGTTTCAGGGTTTTAAAACACGTATGCTAGAGGAAGAAGTTTCCACACTTTTATAAGAAATGCTTTGTTTCCCTTTCCAATTAATGTGGAATCTCACAATCCACCCCTTGGGAGTCCAGCATTCTCGTAGTCACACCGCCCAATGTCTGGCTCTGATACCATTTGTAAAAACTCAAGCCTACTGCTAGAAGATATTATTCGCTTTGGCCCGTTACGTATCACCATTAGCTTCATTGTTTTAAAACGCGTCTACTAGGGAGAAGTTTCCACACCCTTATAAAGAATGCTTAGGGAGAGGTTTCCACACCCTTATAAAAAAATGTTTCATTTCCCTCCCCAACCGATATGAGATTTCATAGTCCATCACTTAGACTTAAAATATATGAACTTGAACGTTAAATTTGAAAGTTCACGAGCAATTGAATCGTTCAATAATAGCCCCTAATATTTTGGTAGTGTGCTAAGTTCAAATAAATGGTAGTGTGCTAAATTCAAAAGATGGTAGTGTGCTATGTGCGGCCAAGTCAACAAGAATAAGAATCGAGGAGTTTTCAAATTTTCAAAGATATGCCAACATTTTCATGGGTTTATAG

mRNA sequence

ATGCTCCAAGGCTTCACTAGAGTGTTGCATAACTTATCTGACAGTTTCCTTGCACACCATACGCCTAATGGATCTCATTGTTTAGACATTTTACGAACAAATGAAACGGATCCACAGTGGTTGGTGGAACAAAGAGTGACAGAGGTTAACATCATCAAGGGATGGATCAATGGTAGTGTGCTATGTGCGGCCAAGTCAACAAGAATAAGAATCGAGGAGTTTTCAAATTTTCAAAGATATGCCAACATTTTCATGGGTTTATAG

Coding sequence (CDS)

ATGCTCCAAGGCTTCACTAGAGTGTTGCATAACTTATCTGACAGTTTCCTTGCACACCATACGCCTAATGGATCTCATTGTTTAGACATTTTACGAACAAATGAAACGGATCCACAGTGGTTGGTGGAACAAAGAGTGACAGAGGTTAACATCATCAAGGGATGGATCAATGGTAGTGTGCTATGTGCGGCCAAGTCAACAAGAATAAGAATCGAGGAGTTTTCAAATTTTCAAAGATATGCCAACATTTTCATGGGTTTATAG

Protein sequence

MLQGFTRVLHNLSDSFLAHHTPNGSHCLDILRTNETDPQWLVEQRVTEVNIIKGWINGSVLCAAKSTRIRIEEFSNFQRYANIFMGL
BLAST of CmaCh04G019420 vs. TrEMBL
Match: A0A0A0KAY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149410 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.9e-15
Identity = 43/62 (69.35%), Postives = 47/62 (75.81%), Query Frame = 1

Query: 8   VLHNLSDSFLAHHTPNGSHCLDILRTNETDPQWLVEQRVTEVNIIKGWINGSVLCAAKST 67
           VL NLSDS LA HTP GSHCLDILR NETDPQWLV+QR TEV II+GWI+       KS 
Sbjct: 437 VLQNLSDSLLAVHTPKGSHCLDILRANETDPQWLVKQRETEVRIIEGWISKYYADLEKSK 496

Query: 68  RI 70
           +I
Sbjct: 497 KI 498

BLAST of CmaCh04G019420 vs. TrEMBL
Match: A0A0A0KBK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149390 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 7.8e-14
Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 1

Query: 8   VLHNLSDSFLAHHTPNGSHCLDILRTNETDPQWLVEQRVTEVNIIKGWIN 58
           VLHN+SDS LA +T NGSHCLDIL+ +ETDP+WLV QR TEV IIKGWI+
Sbjct: 451 VLHNISDSLLAVYTTNGSHCLDILKAHETDPEWLVRQRKTEVGIIKGWIS 500

BLAST of CmaCh04G019420 vs. TrEMBL
Match: A0A151SAM3_CAJCA (Lysosomal Pro-X carboxypeptidase OS=Cajanus cajan GN=KK1_026339 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 5.6e-12
Identity = 36/49 (73.47%), Postives = 40/49 (81.63%), Query Frame = 1

Query: 8   VLHNLSDSFLAHHTPNGSHCLDILRTNETDPQWLVEQRVTEVNIIKGWI 57
           VL N+SD+ +A HT NGSHCLDILR  ETDP WLVEQR  EV+IIKGWI
Sbjct: 440 VLKNISDTLVAVHTVNGSHCLDILRALETDPVWLVEQRKKEVDIIKGWI 488

BLAST of CmaCh04G019420 vs. TrEMBL
Match: A0A0A0KDH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149400 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 9.5e-12
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = 1

Query: 8   VLHNLSDSFLAHHTPNGSHCLDILRTNETDPQWLVEQRVTEVNIIKGWIN 58
           VLHN+SDS LA +T NGSHCLDIL  N  DP+WLV QR TEV IIK WI+
Sbjct: 431 VLHNISDSLLAVYTANGSHCLDILTANRMDPEWLVTQRKTEVGIIKEWID 480

BLAST of CmaCh04G019420 vs. TrEMBL
Match: B9SCN3_RICCO (Lysosomal Pro-X carboxypeptidase, putative OS=Ricinus communis GN=RCOM_0476300 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 9.5e-12
Identity = 36/51 (70.59%), Postives = 42/51 (82.35%), Query Frame = 1

Query: 8   VLHNLSDSFLAHHTPNGSHCLDILRTNE-TDPQWLVEQRVTEVNIIKGWIN 58
           VL ++SD+ LA HT NGSHCLDIL  NE TDP+WLV QR TE+NIIKGWI+
Sbjct: 439 VLEDISDTILAVHTANGSHCLDILIANETTDPEWLVAQRKTEINIIKGWIS 489

BLAST of CmaCh04G019420 vs. TAIR10
Match: AT5G22860.1 (AT5G22860.1 Serine carboxypeptidase S28 family protein)

HSP 1 Score: 58.9 bits (141), Expect = 1.8e-09
Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 1

Query: 8   VLHNLSDSFLAHHTPNGSHCLDILRTNETDPQWLVEQRVTEVNIIKGWIN 58
           VL ++SD+ +A  T NGSHCLDI   ++ DP+WLV QR  E+ +I  WI+
Sbjct: 440 VLEDISDTLVAITTKNGSHCLDITLKSKEDPEWLVIQREKEIKVIDSWIS 489

BLAST of CmaCh04G019420 vs. TAIR10
Match: AT5G65760.1 (AT5G65760.1 Serine carboxypeptidase S28 family protein)

HSP 1 Score: 55.5 bits (132), Expect = 2.0e-08
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 1

Query: 8   VLHNLSDSFLAHHTPNGSHCLDILRTNETDPQWLVEQRVTEVNIIKGWI 57
           VL NLSD+ +A  T  G+H LD+  +   DP+WLV+QR  E+ +I+GWI
Sbjct: 449 VLKNLSDTIVALVTKEGAHHLDLRPSTPEDPKWLVDQREAEIRLIQGWI 497

BLAST of CmaCh04G019420 vs. TAIR10
Match: AT2G24280.1 (AT2G24280.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 48.5 bits (114), Expect = 2.4e-06
Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 1

Query: 8   VLHNLSDSFLAHHTPNGSHCLDILRTNETDPQWLVEQRVTEVNIIKGWIN 58
           VL N+S S +A  T  G+H  D+    + DP+WL EQR  EV II+ WI+
Sbjct: 435 VLKNISSSIVALVTKKGAHHADLRAATKDDPEWLKEQRRQEVAIIEKWIS 484

BLAST of CmaCh04G019420 vs. NCBI nr
Match: gi|449456064|ref|XP_004145770.1| (PREDICTED: lysosomal Pro-X carboxypeptidase [Cucumis sativus])

HSP 1 Score: 89.7 bits (221), Expect = 2.7e-15
Identity = 43/62 (69.35%), Postives = 47/62 (75.81%), Query Frame = 1

Query: 8   VLHNLSDSFLAHHTPNGSHCLDILRTNETDPQWLVEQRVTEVNIIKGWINGSVLCAAKST 67
           VL NLSDS LA HTP GSHCLDILR NETDPQWLV+QR TEV II+GWI+       KS 
Sbjct: 437 VLQNLSDSLLAVHTPKGSHCLDILRANETDPQWLVKQRETEVRIIEGWISKYYADLEKSK 496

Query: 68  RI 70
           +I
Sbjct: 497 KI 498

BLAST of CmaCh04G019420 vs. NCBI nr
Match: gi|659117555|ref|XP_008458663.1| (PREDICTED: lysosomal Pro-X carboxypeptidase isoform X1 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 1.0e-14
Identity = 43/62 (69.35%), Postives = 47/62 (75.81%), Query Frame = 1

Query: 8   VLHNLSDSFLAHHTPNGSHCLDILRTNETDPQWLVEQRVTEVNIIKGWINGSVLCAAKST 67
           VL NLSDS LA HT NGSHCLDILR NETDPQWLVEQR  EV+II+GWI+       KS 
Sbjct: 437 VLQNLSDSLLAVHTLNGSHCLDILRANETDPQWLVEQREKEVSIIEGWISQYYADLEKSK 496

Query: 68  RI 70
           +I
Sbjct: 497 KI 498

BLAST of CmaCh04G019420 vs. NCBI nr
Match: gi|778713428|ref|XP_011657047.1| (PREDICTED: lysosomal Pro-X carboxypeptidase-like [Cucumis sativus])

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-13
Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 1

Query: 8   VLHNLSDSFLAHHTPNGSHCLDILRTNETDPQWLVEQRVTEVNIIKGWIN 58
           VLHN+SDS LA +T NGSHCLDIL+ +ETDP+WLV QR TEV IIKGWI+
Sbjct: 451 VLHNISDSLLAVYTTNGSHCLDILKAHETDPEWLVRQRKTEVGIIKGWIS 500

BLAST of CmaCh04G019420 vs. NCBI nr
Match: gi|659117561|ref|XP_008458666.1| (PREDICTED: lysosomal Pro-X carboxypeptidase-like isoform X2 [Cucumis melo])

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-13
Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 1

Query: 8   VLHNLSDSFLAHHTPNGSHCLDILRTNETDPQWLVEQRVTEVNIIKGWIN 58
           VLH++SDS LA HT NGSHCLDIL+ +ETDP+WLV QR TEV IIKGWI+
Sbjct: 305 VLHSISDSLLAVHTTNGSHCLDILKAHETDPEWLVTQRKTEVGIIKGWIS 354

BLAST of CmaCh04G019420 vs. NCBI nr
Match: gi|659117559|ref|XP_008458665.1| (PREDICTED: lysosomal Pro-X carboxypeptidase-like isoform X1 [Cucumis melo])

HSP 1 Score: 84.3 bits (207), Expect = 1.1e-13
Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 1

Query: 8   VLHNLSDSFLAHHTPNGSHCLDILRTNETDPQWLVEQRVTEVNIIKGWIN 58
           VLH++SDS LA HT NGSHCLDIL+ +ETDP+WLV QR TEV IIKGWI+
Sbjct: 451 VLHSISDSLLAVHTTNGSHCLDILKAHETDPEWLVTQRKTEVGIIKGWIS 500

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KAY8_CUCSA1.9e-1569.35Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149410 PE=4 SV=1[more]
A0A0A0KBK9_CUCSA7.8e-1474.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149390 PE=4 SV=1[more]
A0A151SAM3_CAJCA5.6e-1273.47Lysosomal Pro-X carboxypeptidase OS=Cajanus cajan GN=KK1_026339 PE=4 SV=1[more]
A0A0A0KDH5_CUCSA9.5e-1270.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G149400 PE=4 SV=1[more]
B9SCN3_RICCO9.5e-1270.59Lysosomal Pro-X carboxypeptidase, putative OS=Ricinus communis GN=RCOM_0476300 P... [more]
Match NameE-valueIdentityDescription
AT5G22860.11.8e-0950.00 Serine carboxypeptidase S28 family protein[more]
AT5G65760.12.0e-0848.98 Serine carboxypeptidase S28 family protein[more]
AT2G24280.12.4e-0646.00 alpha/beta-Hydrolases superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449456064|ref|XP_004145770.1|2.7e-1569.35PREDICTED: lysosomal Pro-X carboxypeptidase [Cucumis sativus][more]
gi|659117555|ref|XP_008458663.1|1.0e-1469.35PREDICTED: lysosomal Pro-X carboxypeptidase isoform X1 [Cucumis melo][more]
gi|778713428|ref|XP_011657047.1|1.1e-1374.00PREDICTED: lysosomal Pro-X carboxypeptidase-like [Cucumis sativus][more]
gi|659117561|ref|XP_008458666.1|1.1e-1374.00PREDICTED: lysosomal Pro-X carboxypeptidase-like isoform X2 [Cucumis melo][more]
gi|659117559|ref|XP_008458665.1|1.1e-1374.00PREDICTED: lysosomal Pro-X carboxypeptidase-like isoform X1 [Cucumis melo][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0004180 carboxypeptidase activity
molecular_function GO:0008236 serine-type peptidase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G019420.1CmaCh04G019420.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11010PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATEDcoord: 8..57
score: 9.1
NoneNo IPR availablePANTHERPTHR11010:SF43SUBFAMILY NOT NAMEDcoord: 8..57
score: 9.1

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G019420Cp4.1LG01g17230Cucurbita pepo (Zucchini)cmacpeB720
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G019420Silver-seed gourdcarcmaB1020
CmaCh04G019420Watermelon (97103) v2cmawmbB726
CmaCh04G019420Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G019420Watermelon (Charleston Gray)cmawcgB622
CmaCh04G019420Watermelon (97103) v1cmawmB739
CmaCh04G019420Bottle gourd (USVL1VR-Ls)cmalsiB635
CmaCh04G019420Cucumber (Gy14) v2cgybcmaB670
CmaCh04G019420Melon (DHL92) v3.6.1cmamedB737