CmaCh04G019340 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G019340
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
Descriptionnuclear matrix constituent protein-related
LocationCma_Chr04 : 10523042 .. 10526257 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGTAAGTCAATTTTCTATTATGGTTTTATTCTTATTTTTTACTAATTATGTCAAATCTTTATTTTGTGAACTCACATAATTTTGATTTGGGTCGAAGATATGTGATGTATTTTCCAATTTTGATTTGGCATCTCCCTTCGACCCGTCTCAGTTTCAATCTGTTTTTCGATAGCGACAAATTTGACTTCCTCATTTATCACAAATGCAATTCTCGTACTCAGATTTGAGGGCGGGAGTTGTTGGGTTGAGAGTTTTTTTATGCAACCAAAAGATCAGGTTGGTTAGATTGGTAATTCAACCCGAAAATTTTCCTAACCCAATCCTCTATTTTCGAGTTTACCAAACCCATAGATACCTCTTGCGTATAATTACTATTATTTTTATTTAATTCGGGTTCACCCCGAGTTTTTACCTGAAACTGAACCGATTCCTGATTGTTTAGTTATTTATTCCCGACTGGATTGAACAGACCGGTGGAAGTACGGTTTCTGTAGAACTTGGGGGAGCATCTCAATTCTCGTGTTTGTTTTCACTTCATTACAGACGGCCCACCGCCGCCTTTGGGGTCTCTGAGCGACCGATTCCATAAAATAGCAGCGGCTGCGGATACTGGGGACATGGACGATTGGAGGAAGTTTAAGAAGGCGGGGTTGTTGGACGCGGCTGCAATGGAGCGCAAGGATTGGGAGGCGCTTCTTGAGAAGGCTTCAAGGCTTCAGAGCGAGGTTAGCAATTATCATAAATTCTTACTTGTTTTCTATCTTTGGATTAATTGGGGTTGAACTGTAACGTTATGGCATATGCATTTATGTGATACACTGGACTACAAGTTTGGGCCCTGGTAAAAGCTAGTTTCTATTGTTACTTAGGTTGGTTCACGTTTAGCAAATAAGAGAAGAAATCAAGCCTAGCACAAATTTAACCCTGGTTAATGCACAATATCAAGAAAAACCATTGAATATGCCTTTCAAAACTCACAAATTCATGTTGCAACAGTCAATTAATGCCAAACTCATCCACTAATTTTAATGAATAGTATGGTAAAAATCTCTCCAAATTTAATAATTCAACAAAAATCAAGCCTAGCATAAATTTAAGCCCGCTAATGCACAAGATCGATAAAAACTCACAACTTCAACAAACACAGCTCTAGTATTGTTTTTCTTTGAAGGGCTTCATTAATTTTATAGTAGACTTACGTTTTATATTTATTAAATGTACATAAGAATATTTTCATTGAAAATTTTTAAATTCTATCATAGGGAAAGACTTTCAATGCTTATTTAAGGTTAAGATAGCGATGTTTATCAAAAGTTTGAGGTGCATTTTGATGAAATTAAAAGTTCAGGGTATAAATTGTTTGTTTCCCCTAAAATTTTAAAATAGTTTTGGCAAATTTAGGCAATCATGGGGTGAAATATTGAATTCCAATGTATAGAAAAATAGGTGCTCTTGTGATTTTTTTGAGCAATTATACTTATGTTGGTAGGTTTAATCAGGTTGGAACCTCATGCCTAGGAAGCTGAAATACTGTTTCCATTTAGATGAAGAGAGAAAAAATGTTTTTTTTGCCTTTTTTTTTTGTCTTTTTAATGTAATAGATGTATGCATTATAATGTTGTAGTGTTTAGCACAATCATCCTACAAGATGGGAATAAATGACTTCATTGTTTGTCATTCTTTTGGTATCGTTCCTGTCATCAGAACTTATATTGCTCTTACATGGATTTATCTGATTATTATTTTTGGCAGCTTTTTGATTACCAGCACAATATGGGACTTATTTTGCTAGAGAAGGAAGCGTGTGCTTCAAAGTGTGACCAACTAGAACAAGGTTTAGCAGAAACGGTGGAAATCTTCAAACGTGAACGATCAGCACATTTCATTGCATTATCTGAAGTTGAAACGAGGAGGGATACTTTGAAGAAAGCTCTAGCTGCTGAGAAGCAACATGTGTCTAGTGTATGCTACTCTTGGCACATCCATTCCCCATTAACGTATTTCTTATTTGATAATGTTGCCATTTTCCTTTCTTTTTTGTATTCTTAGATACTCAATTTGTTAGGCCACCAATCGTAAATGTGTACTAGAGAAACATGTAAGTGGTGGGGGGAGTTAACTTTCGTCAGCCCTACTGGTAATTGGGTGAGGTGACATAGGAGAAGTTGTAACAGAGAGAGTAATATGAGGGTAGTATCTATTCTTAAGGAGTATGTATTTGTTTAGAAGAGTCTTGTAGTATGGGAGAGAGAGGATCTTATTTTGAAATTTGGACACTAAATTGTGAAGTTATGTCTATAGAAATAGATCTTAGATCTTAAAGATTGATTAAATACTTAAAGATATCTCGCTTTGAAGTTTTTTAGGGCTATGTGATAGGTCATTGTTCTATTTTGTAGGGAGGGCAATATATATTCACAATATCTAGCCATTAGCAGCATGGATTTGTTTTCACTATTTTGCCAAGATAATATAAGGATGTTTATTAGCAGCTGGCCCCATTCTTTATTTATTATCTTTTCATACCTATTCTTGGTGCAGCTTAAAAAGGCTTTATGTGAAGCAAAGGAGGAGTGTGCAGAAATCGAACTTACTTCTCAGAAAAAGTTGGCTGATGCAAATGCTTTGATATATGAAATTGCGGAGAAATCTTTGGAGTTGGAGAAAAAATTGTATGCTGCTGAAGCGAAGCTTGCTGAGGTAAATAGGAAGAGTTCAGAGTTGGAAATGAGGATGCATAAAGTCGAAAGCAGACCGAGCAAATATCCTTCGTCATAAGGTATTCTTCTCAATATCCTTTTCTTTGAGCATATGACCCATCAATCTTTGATATGTACGGATTTGGGAGAAATGCTTCTGTTTGAATAATCTTCCTGATTTCAAGTAGAAAAGTGGTAGGCTAAATTTAGGCAGAAGAGACCTGACCCTTATCCAATTTGAGGGGTCAATATTGGTGAAGTGACCTTGGAAGTTTTCCCTGGTAGCAGACTAGAAGTTTATGATGGCTGTTTCTTGAAATTTTATTACTTGTAGCATGTTTCATGGTATCCTGAAGTTTGTTGATGTGATATTGATAAATTGATGCTTATCCTCGCGTTATTTTCTCTCTTGATTCTCATGTATCTTTCTTTGTTTAATAGATTATTTCCTGTTCAAATTTTTATTCAAGGTTGATCATTGATGTTTCAGTGTCACGCTACTAAAGTGTAA

mRNA sequence

ATGAAAAACGGCCCACCGCCGCCTTTGGGGTCTCTGAGCGACCGATTCCATAAAATAGCAGCGGCTGCGGATACTGGGGACATGGACGATTGGAGGAAGTTTAAGAAGGCGGGGTTGTTGGACGCGGCTGCAATGGAGCGCAAGGATTGGGAGGCGCTTCTTGAGAAGGCTTCAAGGCTTCAGAGCGAGCTTTTTGATTACCAGCACAATATGGGACTTATTTTGCTAGAGAAGGAAGCGTGTGCTTCAAAGTGTGACCAACTAGAACAAGGTTTAGCAGAAACGGTGGAAATCTTCAAACGTGAACGATCAGCACATTTCATTGCATTATCTGAAGTTGAAACGAGGAGGGATACTTTGAAGAAAGCTCTAGCTGCTGAGAAGCAACATGTGTCTAGTCTTAAAAAGGCTTTATGTGAAGCAAAGGAGGAGTGTGCAGAAATCGAACTTACTTCTCAGAAAAAGTTGGCTGATGCAAATGCTTTGATATATGAAATTGCGGAGAAATCTTTGGAGTTGGAGAAAAAATTGTATGCTGCTGAAGCGAAGCTTGCTGAGTGTCACGCTACTAAAGTGTAA

Coding sequence (CDS)

ATGAAAAACGGCCCACCGCCGCCTTTGGGGTCTCTGAGCGACCGATTCCATAAAATAGCAGCGGCTGCGGATACTGGGGACATGGACGATTGGAGGAAGTTTAAGAAGGCGGGGTTGTTGGACGCGGCTGCAATGGAGCGCAAGGATTGGGAGGCGCTTCTTGAGAAGGCTTCAAGGCTTCAGAGCGAGCTTTTTGATTACCAGCACAATATGGGACTTATTTTGCTAGAGAAGGAAGCGTGTGCTTCAAAGTGTGACCAACTAGAACAAGGTTTAGCAGAAACGGTGGAAATCTTCAAACGTGAACGATCAGCACATTTCATTGCATTATCTGAAGTTGAAACGAGGAGGGATACTTTGAAGAAAGCTCTAGCTGCTGAGAAGCAACATGTGTCTAGTCTTAAAAAGGCTTTATGTGAAGCAAAGGAGGAGTGTGCAGAAATCGAACTTACTTCTCAGAAAAAGTTGGCTGATGCAAATGCTTTGATATATGAAATTGCGGAGAAATCTTTGGAGTTGGAGAAAAAATTGTATGCTGCTGAAGCGAAGCTTGCTGAGTGTCACGCTACTAAAGTGTAA

Protein sequence

MKNGPPPPLGSLSDRFHKIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLEKASRLQSELFDYQHNMGLILLEKEACASKCDQLEQGLAETVEIFKRERSAHFIALSEVETRRDTLKKALAAEKQHVSSLKKALCEAKEECAEIELTSQKKLADANALIYEIAEKSLELEKKLYAAEAKLAECHATKV
Homology
[Close]
BLAST of CmaCh04G019340 vs. Swiss-Prot
Match: CRWN2_ARATH (Protein CROWDED NUCLEI 2 OS=Arabidopsis thaliana GN=CRWN2 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.4e-40
Identity = 92/182 (50.55%), Postives = 128/182 (70.33%), Query Frame = 1 

Query: 5   PPPPLGSLSDRFHKIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLEKASRLQSEL 64
           PPPP+G+L+ +        D  DM DWR+F++ GLL+ A+ME+KD EALLEK S L+ EL
Sbjct: 38  PPPPIGTLTGQGVS-RGHTDDMDMGDWRRFREVGLLNEASMEKKDQEALLEKISTLEKEL 97

Query: 65  FDYQHNMGLILLEKEACASKCDQLEQGLAETVEIFKRERSAHFIALSEVETRRDTLKKAL 124
           + YQHNMGL+L+E +   SK +QL Q   E  EI KRE+S+H  AL+ VE R + L+KAL
Sbjct: 98  YGYQHNMGLLLMENKELVSKHEQLNQAFQEAQEILKREQSSHLYALTTVEQREENLRKAL 157

Query: 125 AAEKQHVSSLKKALCEAKEECAEIELTSQKKLADANALIYEIAEKSLELEKKLYAAEAKL 184
             EKQ V  L+KAL E +EE ++I L+S+ KL +ANAL+  +  +S ++E K+Y+AE+KL
Sbjct: 158 GLEKQCVQELEKALREIQEENSKIRLSSEAKLVEANALVASVNGRSSDVENKIYSAESKL 217

Query: 185 AE 187
           AE
Sbjct: 218 AE 218

[Close]
BLAST of CmaCh04G019340 vs. Swiss-Prot
Match: CRWN3_ARATH (Protein CROWDED NUCLEI 3 OS=Arabidopsis thaliana GN=CRWN3 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-30
Identity = 72/157 (45.86%), Postives = 112/157 (71.34%), Query Frame = 1 

Query: 29  DDWRKFKKAGLLDAAAMERKDWEALLEKASRLQSELFDYQHNMGLILLEKEACASKCDQL 88
           DDW+KFK+ GLLD A++ERKD +AL+EK  +L+ ELFDYQHNMGL+L+EK+   S  ++L
Sbjct: 39  DDWQKFKEVGLLDEASLERKDRDALIEKILKLEKELFDYQHNMGLLLIEKKQWTSTNNEL 98

Query: 89  EQGLAETVEIFKRERSAHFIALSEVETRRDTLKKALAAEKQHVSSLKKALCEAKEECAEI 148
           +Q   E +E+ KRE++++ I L+E + R + L+KAL  EKQ V+ L+  L   + E + +
Sbjct: 99  QQAYDEAMEMLKREKTSNAITLNEADKREENLRKALIDEKQFVAELENDLKYWQREHSVV 158

Query: 149 ELTSQKKLADANALIYEIAEKSLELEKKLYAAEAKLA 186
           + TS+ KL +ANAL+  + EK+LE++++   AE K +
Sbjct: 159 KSTSEAKLEEANALVIGMKEKALEVDRERAIAEEKFS 195

[Close]
BLAST of CmaCh04G019340 vs. Swiss-Prot
Match: CRWN1_ARATH (Protein CROWDED NUCLEI 1 OS=Arabidopsis thaliana GN=CRWN1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.1e-27
Identity = 70/138 (50.72%), Postives = 96/138 (69.57%), Query Frame = 1 

Query: 49  DWEALLEKASRLQSELFDYQHNMGLILLEKEACASKCDQLEQGLAETVEIFKRERSAHFI 108
           D   L EK S L+ ELF+YQH+MGL+L+EK+  +S+ + L+Q   E  E  K+ER+AH I
Sbjct: 48  DPRILPEKISELEKELFEYQHSMGLLLIEKKEWSSQYEALQQAFEEVNECLKQERNAHLI 107

Query: 109 ALSEVETRRDTLKKALAAEKQHVSSLKKALCEAKEECAEIELTSQKKLADANALIYEIAE 168
           A+++VE R + L+KAL  EKQ    L+KAL E + E AEI+ T+  KL +ANAL+  + E
Sbjct: 108 AIADVEKREEGLRKALGIEKQCALDLEKALKELRAENAEIKFTADSKLTEANALVRSVEE 167

Query: 169 KSLELEKKLYAAEAKLAE 187
           KSLE+E KL A +AKLAE
Sbjct: 168 KSLEVEAKLRAVDAKLAE 185

[Close]
BLAST of CmaCh04G019340 vs. Swiss-Prot
Match: CRWN4_ARATH (Protein CROWDED NUCLEI 4 OS=Arabidopsis thaliana GN=CRWN4 PE=1 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 3.2e-21
Identity = 58/158 (36.71%), Postives = 104/158 (65.82%), Query Frame = 1 

Query: 31  WRKFKKAGLLDAAAMERKDWEALLEKASRLQSELFDYQHNMGLILLEKEACASKCDQLEQ 90
           W++ K AG  D  +++ +D  AL+   ++L+SE++DYQHNMGL+LLEK   +S+ ++++ 
Sbjct: 41  WKRLKDAGF-DEQSIKNRDKAALIAYIAKLESEVYDYQHNMGLLLLEKNELSSQYEEIKA 100

Query: 91  GLAETVEIFKRERSAHFIALSEVETRRDTLKKALAAEKQHVSSLKKALCEAKEECAEIEL 150
            + E+     RE+SA+  AL+E + R ++LKK +   K+ +SSL+K L E + ECAE ++
Sbjct: 101 SVDESDLTHMREKSAYVSALAEAKKREESLKKDVGIAKECISSLEKTLHEMRAECAETKV 160

Query: 151 TSQKKLADANALIYEIAEKSLELEKKLYAAEAKLAECH 189
           ++   +++A+ +I +  +K  + E K+ AAEA  AE +
Sbjct: 161 SAGSTMSEAHVMIEDALKKLADAEAKMRAAEALQAEAN 197

[Close]
BLAST of CmaCh04G019340 vs. TrEMBL
Match: A5BQE9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038920 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-48
Identity = 109/184 (59.24%), Postives = 146/184 (79.35%), Query Frame = 1 

Query: 3   NGPPPPLGSLSDRFHKIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLEKASRLQS 62
           +GPPPPLGSLS +   +    D GDM+DWR+ ++AGLLD AAMERKD EAL+EK S+LQ+
Sbjct: 62  DGPPPPLGSLSGK--AMLTGIDGGDMEDWRRLREAGLLDEAAMERKDREALVEKVSKLQN 121

Query: 63  ELFDYQHNMGLILLEKEACASKCDQLEQGLAETVEIFKRERSAHFIALSEVETRRDTLKK 122
           ELFDYQ++MGL+L+EK+   SK ++L Q LAE  EI KRE+SAHFIA+SEVE R + L+K
Sbjct: 122 ELFDYQYSMGLLLIEKKEWTSKYEELSQALAEAQEILKREKSAHFIAISEVEKREENLRK 181

Query: 123 ALAAEKQHVSSLKKALCEAKEECAEIELTSQKKLADANALIYEIAEKSLELEKKLYAAEA 182
           AL  E+Q V+ L+KAL E   E ++I+L+S+ KL+DANAL+ +I ++SLE+E+KL AA+A
Sbjct: 182 ALGVERQCVAELEKALGEIHAEHSQIKLSSETKLSDANALVAKIEKRSLEVEEKLLAADA 241

Query: 183 KLAE 187
           KLAE
Sbjct: 242 KLAE 243

[Close]
BLAST of CmaCh04G019340 vs. TrEMBL
Match: M5Y1X5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000415mg PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-48
Identity = 110/184 (59.78%), Postives = 140/184 (76.09%), Query Frame = 1 

Query: 3   NGPPPPLGSLSDRFHKIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLEKASRLQS 62
           +GPPPPLGSLS+   K     DTGDMDDWR+FK+ GLL+ AAMERKD +AL +K S+LQ 
Sbjct: 39  DGPPPPLGSLSESGPKTIPDFDTGDMDDWRRFKEVGLLNEAAMERKDRQALADKVSKLQK 98

Query: 63  ELFDYQHNMGLILLEKEACASKCDQLEQGLAETVEIFKRERSAHFIALSEVETRRDTLKK 122
           EL+DYQ+NMGL+L+EK+  A K ++L + LAET EI KRE+SAH I++SEVE R + L+K
Sbjct: 99  ELYDYQYNMGLLLIEKKEWALKHEELGEALAETQEILKREQSAHLISISEVEKREENLRK 158

Query: 123 ALAAEKQHVSSLKKALCEAKEECAEIELTSQKKLADANALIYEIAEKSLELEKKLYAAEA 182
            L AEKQ V+ L+KAL E  EE A+I+L S+ KLADAN+L+  I EKSLE + K  AAEA
Sbjct: 159 VLVAEKQCVAELEKALREMHEEHAQIKLKSEAKLADANSLVVGIEEKSLETDAKFLAAEA 218

Query: 183 KLAE 187
            +AE
Sbjct: 219 NIAE 222

[Close]
BLAST of CmaCh04G019340 vs. TrEMBL
Match: F6HF26_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02810 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-48
Identity = 109/184 (59.24%), Postives = 146/184 (79.35%), Query Frame = 1 

Query: 3   NGPPPPLGSLSDRFHKIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLEKASRLQS 62
           +GPPPPLGSLS +   +    D GDM+DWR+ ++AGLLD AAMERKD EAL+EK S+LQ+
Sbjct: 44  DGPPPPLGSLSGK--AMLTGIDGGDMEDWRRLREAGLLDEAAMERKDREALVEKVSKLQN 103

Query: 63  ELFDYQHNMGLILLEKEACASKCDQLEQGLAETVEIFKRERSAHFIALSEVETRRDTLKK 122
           ELFDYQ++MGL+L+EK+   SK ++L Q LAE  EI KRE+SAHFIA+SEVE R + L+K
Sbjct: 104 ELFDYQYSMGLLLIEKKEWTSKYEELSQALAEAQEILKREKSAHFIAISEVEKREENLRK 163

Query: 123 ALAAEKQHVSSLKKALCEAKEECAEIELTSQKKLADANALIYEIAEKSLELEKKLYAAEA 182
           AL  E+Q V+ L+KAL E   E ++I+L+S+ KL+DANAL+ +I ++SLE+E+KL AA+A
Sbjct: 164 ALGVERQCVAELEKALGEIHAEHSQIKLSSETKLSDANALVAKIEKRSLEVEEKLLAADA 223

Query: 183 KLAE 187
           KLAE
Sbjct: 224 KLAE 225

[Close]
BLAST of CmaCh04G019340 vs. TrEMBL
Match: B9SEG9_RICCO (ATP binding protein, putative OS=Ricinus communis GN=RCOM_0704500 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.5e-45
Identity = 107/182 (58.79%), Postives = 135/182 (74.18%), Query Frame = 1 

Query: 5   PPPPLGSLSDRFHKIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLEKASRLQSEL 64
           PPPP+ SLS       A A+T DM+DWR+FK+AGLLD A MERKD +AL+EKASRL+ EL
Sbjct: 49  PPPPVASLSGN-----AEAETEDMEDWRRFKEAGLLDEAVMERKDRQALIEKASRLEKEL 108

Query: 65  FDYQHNMGLILLEKEACASKCDQLEQGLAETVEIFKRERSAHFIALSEVETRRDTLKKAL 124
           FDYQ+NMGL+L+EK+   SK D+L Q LAE  EI +RE+SA+ I  SE E R + L+KAL
Sbjct: 109 FDYQYNMGLLLIEKKEWTSKFDELRQALAEAEEILRREQSANIITFSEAEKREENLRKAL 168

Query: 125 AAEKQHVSSLKKALCEAKEECAEIELTSQKKLADANALIYEIAEKSLELEKKLYAAEAKL 184
             EKQ V  L+KAL + +EE A+I+  S+ KLADA AL   I EKSLE+E+K++AAEAKL
Sbjct: 169 GVEKQCVIDLEKALRDLQEERAQIKHASESKLADAKALSVGIEEKSLEVEEKMHAAEAKL 225

Query: 185 AE 187
            E
Sbjct: 229 TE 225

[Close]
BLAST of CmaCh04G019340 vs. TrEMBL
Match: A0A067JZP5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18268 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.5e-44
Identity = 106/182 (58.24%), Postives = 135/182 (74.18%), Query Frame = 1 

Query: 5   PPPPLGSLSDRFHKIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLEKASRLQSEL 64
           PPPP+GSLS    ++    DT DM+DW++F++AGLLD A MERKD +ALLEKASRL+ EL
Sbjct: 56  PPPPVGSLSGNDVEL----DTEDMEDWKRFREAGLLDEAVMERKDRQALLEKASRLEKEL 115

Query: 65  FDYQHNMGLILLEKEACASKCDQLEQGLAETVEIFKRERSAHFIALSEVETRRDTLKKAL 124
           FDYQ+NMGL+L+EK+   S  ++L Q LAE  EI +RE+S H IA SE E R D LKKAL
Sbjct: 116 FDYQYNMGLLLIEKKEWNSNYEELRQALAEAQEILRREQSTHIIAFSEAEKREDNLKKAL 175

Query: 125 AAEKQHVSSLKKALCEAKEECAEIELTSQKKLADANALIYEIAEKSLELEKKLYAAEAKL 184
             EKQ V+ L+KAL +  EE ++I+  S+ KLADA AL   + EKSLE+E+KL AAEA+L
Sbjct: 176 VIEKQCVTDLEKALRDLHEERSQIKHASESKLADAKALAVGMEEKSLEVEEKLCAAEAQL 233

Query: 185 AE 187
           AE
Sbjct: 236 AE 233

[Close]
BLAST of CmaCh04G019340 vs. TAIR10
Match: AT1G13220.2 (AT1G13220.2 nuclear matrix constituent protein-related)

HSP 1 Score: 166.8 bits (421), Expect = 1.3e-41
Identity = 92/182 (50.55%), Postives = 128/182 (70.33%), Query Frame = 1 

Query: 5   PPPPLGSLSDRFHKIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLEKASRLQSEL 64
           PPPP+G+L+ +        D  DM DWR+F++ GLL+ A+ME+KD EALLEK S L+ EL
Sbjct: 38  PPPPIGTLTGQGVS-RGHTDDMDMGDWRRFREVGLLNEASMEKKDQEALLEKISTLEKEL 97

Query: 65  FDYQHNMGLILLEKEACASKCDQLEQGLAETVEIFKRERSAHFIALSEVETRRDTLKKAL 124
           + YQHNMGL+L+E +   SK +QL Q   E  EI KRE+S+H  AL+ VE R + L+KAL
Sbjct: 98  YGYQHNMGLLLMENKELVSKHEQLNQAFQEAQEILKREQSSHLYALTTVEQREENLRKAL 157

Query: 125 AAEKQHVSSLKKALCEAKEECAEIELTSQKKLADANALIYEIAEKSLELEKKLYAAEAKL 184
             EKQ V  L+KAL E +EE ++I L+S+ KL +ANAL+  +  +S ++E K+Y+AE+KL
Sbjct: 158 GLEKQCVQELEKALREIQEENSKIRLSSEAKLVEANALVASVNGRSSDVENKIYSAESKL 217

Query: 185 AE 187
           AE
Sbjct: 218 AE 218

[Close]
BLAST of CmaCh04G019340 vs. TAIR10
Match: AT1G68790.1 (AT1G68790.1 little nuclei3)

HSP 1 Score: 134.4 bits (337), Expect = 7.3e-32
Identity = 72/157 (45.86%), Postives = 112/157 (71.34%), Query Frame = 1 

Query: 29  DDWRKFKKAGLLDAAAMERKDWEALLEKASRLQSELFDYQHNMGLILLEKEACASKCDQL 88
           DDW+KFK+ GLLD A++ERKD +AL+EK  +L+ ELFDYQHNMGL+L+EK+   S  ++L
Sbjct: 39  DDWQKFKEVGLLDEASLERKDRDALIEKILKLEKELFDYQHNMGLLLIEKKQWTSTNNEL 98

Query: 89  EQGLAETVEIFKRERSAHFIALSEVETRRDTLKKALAAEKQHVSSLKKALCEAKEECAEI 148
           +Q   E +E+ KRE++++ I L+E + R + L+KAL  EKQ V+ L+  L   + E + +
Sbjct: 99  QQAYDEAMEMLKREKTSNAITLNEADKREENLRKALIDEKQFVAELENDLKYWQREHSVV 158

Query: 149 ELTSQKKLADANALIYEIAEKSLELEKKLYAAEAKLA 186
           + TS+ KL +ANAL+  + EK+LE++++   AE K +
Sbjct: 159 KSTSEAKLEEANALVIGMKEKALEVDRERAIAEEKFS 195

[Close]
BLAST of CmaCh04G019340 vs. TAIR10
Match: AT1G67230.1 (AT1G67230.1 little nuclei1)

HSP 1 Score: 122.5 bits (306), Expect = 2.9e-28
Identity = 70/138 (50.72%), Postives = 96/138 (69.57%), Query Frame = 1 

Query: 49  DWEALLEKASRLQSELFDYQHNMGLILLEKEACASKCDQLEQGLAETVEIFKRERSAHFI 108
           D   L EK S L+ ELF+YQH+MGL+L+EK+  +S+ + L+Q   E  E  K+ER+AH I
Sbjct: 48  DPRILPEKISELEKELFEYQHSMGLLLIEKKEWSSQYEALQQAFEEVNECLKQERNAHLI 107

Query: 109 ALSEVETRRDTLKKALAAEKQHVSSLKKALCEAKEECAEIELTSQKKLADANALIYEIAE 168
           A+++VE R + L+KAL  EKQ    L+KAL E + E AEI+ T+  KL +ANAL+  + E
Sbjct: 108 AIADVEKREEGLRKALGIEKQCALDLEKALKELRAENAEIKFTADSKLTEANALVRSVEE 167

Query: 169 KSLELEKKLYAAEAKLAE 187
           KSLE+E KL A +AKLAE
Sbjct: 168 KSLEVEAKLRAVDAKLAE 185

[Close]
BLAST of CmaCh04G019340 vs. TAIR10
Match: AT5G65770.2 (AT5G65770.2 little nuclei4)

HSP 1 Score: 103.2 bits (256), Expect = 1.8e-22
Identity = 58/158 (36.71%), Postives = 104/158 (65.82%), Query Frame = 1 

Query: 31  WRKFKKAGLLDAAAMERKDWEALLEKASRLQSELFDYQHNMGLILLEKEACASKCDQLEQ 90
           W++ K AG  D  +++ +D  AL+   ++L+SE++DYQHNMGL+LLEK   +S+ ++++ 
Sbjct: 41  WKRLKDAGF-DEQSIKNRDKAALIAYIAKLESEVYDYQHNMGLLLLEKNELSSQYEEIKA 100

Query: 91  GLAETVEIFKRERSAHFIALSEVETRRDTLKKALAAEKQHVSSLKKALCEAKEECAEIEL 150
            + E+     RE+SA+  AL+E + R ++LKK +   K+ +SSL+K L E + ECAE ++
Sbjct: 101 SVDESDLTHMREKSAYVSALAEAKKREESLKKDVGIAKECISSLEKTLHEMRAECAETKV 160

Query: 151 TSQKKLADANALIYEIAEKSLELEKKLYAAEAKLAECH 189
           ++   +++A+ +I +  +K  + E K+ AAEA  AE +
Sbjct: 161 SAGSTMSEAHVMIEDALKKLADAEAKMRAAEALQAEAN 197

[Close]
BLAST of CmaCh04G019340 vs. TAIR10
Match: AT5G65780.2 (AT5G65780.2 branched-chain amino acid aminotransferase 5 / branched-chain amino acid transaminase 5 (BCAT5))

HSP 1 Score: 92.8 bits (229), Expect = 2.4e-19
Identity = 57/166 (34.34%), Postives = 101/166 (60.84%), Query Frame = 1 

Query: 31  WRKFKKAGLLDAAAMERKDWEALLEKASRLQSELFDYQHNMGLILLEKEACASKCDQLEQ 90
           W++ K AG  D  +++ +D  AL+   ++L+SE++DYQHNMGL+LLEK   +S+ ++++ 
Sbjct: 41  WKRLKDAGF-DEQSIKNRDKAALIAYIAKLESEVYDYQHNMGLLLLEKNELSSQYEEIKA 100

Query: 91  GLAETVEIFKRERSAHFIALSEVETRRDTLKKALAAEKQ--------HVSSLKKALCEAK 150
            + E+     RE+SA+  AL+E + R ++LKK +   K           S L+K L E +
Sbjct: 101 SVDESDLTHMREKSAYVSALAEAKKREESLKKDVGIAKDLFIDFVLFFFSQLEKTLHEMR 160

Query: 151 EECAEIELTSQKKLADANALIYEIAEKSLELEKKLYAAEAKLAECH 189
            ECAE ++++   +++A+ +I +  +K  + E K+ AAEA  AE +
Sbjct: 161 AECAETKVSAGSTMSEAHVMIEDALKKLADAEAKMRAAEALQAEAN 205

[Close]
BLAST of CmaCh04G019340 vs. NCBI nr
Match: gi|659072986|ref|XP_008467201.1| (PREDICTED: putative nuclear matrix constituent protein 1-like protein [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 4.9e-70
Identity = 150/182 (82.42%), Postives = 161/182 (88.46%), Query Frame = 1 

Query: 5   PPPPLGSLSDRFHKIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLEKASRLQSEL 64
           PPPPLGSL+D  +K A A DTGDMDDWRKFKKAGLLDAAAMERKD EALLEKASRLQSEL
Sbjct: 42  PPPPLGSLNDELYKTATAVDTGDMDDWRKFKKAGLLDAAAMERKDREALLEKASRLQSEL 101

Query: 65  FDYQHNMGLILLEKEACASKCDQLEQGLAETVEIFKRERSAHFIALSEVETRRDTLKKAL 124
           FDYQHNMGL+L+EK+  A K DQLEQ LAET EIFKRE+SAH IALSEVETRRD LKKAL
Sbjct: 102 FDYQHNMGLLLIEKKDWALKFDQLEQDLAETEEIFKREQSAHLIALSEVETRRDNLKKAL 161

Query: 125 AAEKQHVSSLKKALCEAKEECAEIELTSQKKLADANALIYEIAEKSLELEKKLYAAEAKL 184
           AAEKQHVSSLKK+L E  EE AEI+LTSQKKLADANAL++ I EKSLEL+KKL AAEAKL
Sbjct: 162 AAEKQHVSSLKKSLYEVNEERAEIKLTSQKKLADANALMHGIEEKSLELQKKLNAAEAKL 221

Query: 185 AE 187
           AE
Sbjct: 222 AE 223

[Close]
BLAST of CmaCh04G019340 vs. NCBI nr
Match: gi|449458807|ref|XP_004147138.1| (PREDICTED: putative nuclear matrix constituent protein 1-like protein [Cucumis sativus])

HSP 1 Score: 265.0 bits (676), Expect = 1.0e-67
Identity = 146/182 (80.22%), Postives = 158/182 (86.81%), Query Frame = 1 

Query: 5   PPPPLGSLSDRFHKIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLEKASRLQSEL 64
           PPPPLGSL+D  +K A A DTGDMDDWRKFKKAGLLDAAAMERKD EALLEKASRLQSEL
Sbjct: 42  PPPPLGSLNDELYKTATAVDTGDMDDWRKFKKAGLLDAAAMERKDREALLEKASRLQSEL 101

Query: 65  FDYQHNMGLILLEKEACASKCDQLEQGLAETVEIFKRERSAHFIALSEVETRRDTLKKAL 124
            DYQHN+GL+L+EK+  ASK D+L Q LAET EIFKRE+SAH IALSEVETRRD LKKAL
Sbjct: 102 LDYQHNLGLLLIEKKDWASKFDELGQDLAETEEIFKREQSAHLIALSEVETRRDNLKKAL 161

Query: 125 AAEKQHVSSLKKALCEAKEECAEIELTSQKKLADANALIYEIAEKSLELEKKLYAAEAKL 184
           AAEKQHVSSLK A  E  EE AEI+LTSQKKLADANAL++ I EKSLEL+KKL AAEAKL
Sbjct: 162 AAEKQHVSSLKMAFYEVNEERAEIKLTSQKKLADANALMHGIEEKSLELQKKLNAAEAKL 221

Query: 185 AE 187
           AE
Sbjct: 222 AE 223

[Close]
BLAST of CmaCh04G019340 vs. NCBI nr
Match: gi|694417100|ref|XP_009336642.1| (PREDICTED: putative nuclear matrix constituent protein 1-like protein isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-50
Identity = 114/184 (61.96%), Postives = 141/184 (76.63%), Query Frame = 1 

Query: 3   NGPPPPLGSLSDRFHKIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLEKASRLQS 62
           +GPPPPLGSLS+      A  DTGDMDDWR FK+AG LD A+MERKD +AL EK S+LQ+
Sbjct: 40  DGPPPPLGSLSENGPYTTAGLDTGDMDDWRAFKEAGFLDEASMERKDHQALAEKVSKLQT 99

Query: 63  ELFDYQHNMGLILLEKEACASKCDQLEQGLAETVEIFKRERSAHFIALSEVETRRDTLKK 122
           ELFDYQ+NMGL+L+EK+  ASK ++L Q LAET EI KRE+SAH IA+SEVE R + L++
Sbjct: 100 ELFDYQYNMGLLLIEKKEWASKNEELSQALAETQEILKREQSAHLIAISEVEKREENLRR 159

Query: 123 ALAAEKQHVSSLKKALCEAKEECAEIELTSQKKLADANALIYEIAEKSLELEKKLYAAEA 182
            L AEKQ V+ L+K L E  EE A+I+  S+ K+ADAN+L+  I EKSLE + KL AAEA
Sbjct: 160 VLVAEKQCVAQLEKTLHEMHEEHAQIKRESEAKMADANSLVVGIEEKSLETDAKLCAAEA 219

Query: 183 KLAE 187
           KLAE
Sbjct: 220 KLAE 223

[Close]
BLAST of CmaCh04G019340 vs. NCBI nr
Match: gi|694417103|ref|XP_009336643.1| (PREDICTED: putative nuclear matrix constituent protein 1-like protein isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-50
Identity = 114/184 (61.96%), Postives = 141/184 (76.63%), Query Frame = 1 

Query: 3   NGPPPPLGSLSDRFHKIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLEKASRLQS 62
           +GPPPPLGSLS+      A  DTGDMDDWR FK+AG LD A+MERKD +AL EK S+LQ+
Sbjct: 40  DGPPPPLGSLSENGPYTTAGLDTGDMDDWRAFKEAGFLDEASMERKDHQALAEKVSKLQT 99

Query: 63  ELFDYQHNMGLILLEKEACASKCDQLEQGLAETVEIFKRERSAHFIALSEVETRRDTLKK 122
           ELFDYQ+NMGL+L+EK+  ASK ++L Q LAET EI KRE+SAH IA+SEVE R + L++
Sbjct: 100 ELFDYQYNMGLLLIEKKEWASKNEELSQALAETQEILKREQSAHLIAISEVEKREENLRR 159

Query: 123 ALAAEKQHVSSLKKALCEAKEECAEIELTSQKKLADANALIYEIAEKSLELEKKLYAAEA 182
            L AEKQ V+ L+K L E  EE A+I+  S+ K+ADAN+L+  I EKSLE + KL AAEA
Sbjct: 160 VLVAEKQCVAQLEKTLHEMHEEHAQIKRESEAKMADANSLVVGIEEKSLETDAKLCAAEA 219

Query: 183 KLAE 187
           KLAE
Sbjct: 220 KLAE 223

[Close]
BLAST of CmaCh04G019340 vs. NCBI nr
Match: gi|658048756|ref|XP_008360063.1| (PREDICTED: putative nuclear matrix constituent protein 1-like protein [Malus domestica])

HSP 1 Score: 207.2 bits (526), Expect = 2.5e-50
Identity = 114/184 (61.96%), Postives = 140/184 (76.09%), Query Frame = 1 

Query: 3   NGPPPPLGSLSDRFHKIAAAADTGDMDDWRKFKKAGLLDAAAMERKDWEALLEKASRLQS 62
           +GPPPPLGSLS+      A  DTGDMDDWR FK+AG LD A+MERKD +AL EK S+LQ 
Sbjct: 40  DGPPPPLGSLSEXGPYTTAGLDTGDMDDWRAFKEAGFLDEASMERKDHQALAEKVSKLQX 99

Query: 63  ELFDYQHNMGLILLEKEACASKCDQLEQGLAETVEIFKRERSAHFIALSEVETRRDTLKK 122
           ELFDYQ+NMGL+L+EK+  ASK ++L Q LAET EI KRE+SAH IA+SEVE R + L++
Sbjct: 100 ELFDYQYNMGLLLIEKKEWASKNEELSQALAETQEILKREQSAHLIAISEVEKREENLRR 159

Query: 123 ALAAEKQHVSSLKKALCEAKEECAEIELTSQKKLADANALIYEIAEKSLELEKKLYAAEA 182
            L AEKQ V+ L+KAL E  EE A+I+  S+ K+ DAN+L+  I EKSLE + KL AAEA
Sbjct: 160 VLVAEKQCVAQLEKALREMHEEHAQIKRESEAKMVDANSLVVGIEEKSLETDAKLCAAEA 219

Query: 183 KLAE 187
           KLAE
Sbjct: 220 KLAE 223

The following BLAST results are available for this feature:
BLAST of CmaCh04G019340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CRWN2_ARATH2.4e-4050.55Protein CROWDED NUCLEI 2 OS=Arabidopsis thaliana GN=CRWN2 PE=1 SV=1[more]
CRWN3_ARATH1.3e-3045.86Protein CROWDED NUCLEI 3 OS=Arabidopsis thaliana GN=CRWN3 PE=1 SV=1[more]
CRWN1_ARATH5.1e-2750.72Protein CROWDED NUCLEI 1 OS=Arabidopsis thaliana GN=CRWN1 PE=1 SV=1[more]
CRWN4_ARATH3.2e-2136.71Protein CROWDED NUCLEI 4 OS=Arabidopsis thaliana GN=CRWN4 PE=1 SV=2[more]
BLAST of CmaCh04G019340 vs. TrEMBL
Match NameE-valueIdentityDescription
A5BQE9_VITVI1.3e-4859.24Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038920 PE=4 SV=1[more]
M5Y1X5_PRUPE1.3e-4859.78Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000415mg PE=4 SV=1[more]
F6HF26_VITVI1.3e-4859.24Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g02810 PE=4 SV=... [more]
B9SEG9_RICCO6.5e-4558.79ATP binding protein, putative OS=Ricinus communis GN=RCOM_0704500 PE=4 SV=1[more]
A0A067JZP5_JATCU2.5e-4458.24Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18268 PE=4 SV=1[more]
BLAST of CmaCh04G019340 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G13220.21.3e-4150.55 nuclear matrix constituent protein-related[more]
AT1G68790.17.3e-3245.86 little nuclei3[more]
AT1G67230.12.9e-2850.72 little nuclei1[more]
AT5G65770.21.8e-2236.71 little nuclei4[more]
AT5G65780.22.4e-1934.34 branched-chain amino acid aminotransferase 5 / branched-chain amino ... [more]
BLAST of CmaCh04G019340 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072986|ref|XP_008467201.1|4.9e-7082.42PREDICTED: putative nuclear matrix constituent protein 1-like protein [Cucumis m... [more]
gi|449458807|ref|XP_004147138.1|1.0e-6780.22PREDICTED: putative nuclear matrix constituent protein 1-like protein [Cucumis s... [more]
gi|694417100|ref|XP_009336642.1|1.1e-5061.96PREDICTED: putative nuclear matrix constituent protein 1-like protein isoform X1... [more]
gi|694417103|ref|XP_009336643.1|1.1e-5061.96PREDICTED: putative nuclear matrix constituent protein 1-like protein isoform X2... [more]
gi|658048756|ref|XP_008360063.1|2.5e-5061.96PREDICTED: putative nuclear matrix constituent protein 1-like protein [Malus dom... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G019340.1CmaCh04G019340.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 110..130
score: -coord: 40..60
scor
NoneNo IPR availablePANTHERPTHR31908FAMILY NOT NAMEDcoord: 5..186
score: 6.8
NoneNo IPR availablePANTHERPTHR31908:SF4F3F19.25 PROTEIN-RELATEDcoord: 5..186
score: 6.8

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G019340Watermelon (97103) v2cmawmbB726
CmaCh04G019340Wax gourdcmawgoB0904
CmaCh04G019340Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G019340Watermelon (Charleston Gray)cmawcgB622
CmaCh04G019340Watermelon (97103) v1cmawmB739
CmaCh04G019340Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G019340Cucurbita pepo (Zucchini)cmacpeB732
CmaCh04G019340Bottle gourd (USVL1VR-Ls)cmalsiB635
CmaCh04G019340Silver-seed gourdcarcmaB1020