CmaCh04G019170 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTATCCCCAAACTGCAAGCTTCCATGGCTAAGTATGAAGCAAGCGAGATGATCAAGAAGAATACTAGAAATGGTGATAATGTTGAACTAAAAGCTTTTAGTGGCATTACTCGAGCTTCAACTCAAGTCAACAATCAAGGCATGGTACCAGAAATCCTTAGAAATAATAAGAATGTCGGGCCCAAGCTTAGTTCAAATACTCATCTAAAGGCATCAAATATGCAATTTAGTCGAGAGCAGATGAAGGAGATCTTTAGATATCATGATAGTGACAGAGATGGTTTTCTCAATATAAGAGAGCTAACAAAGGCTTTTGCTTTTCTAGGCTCAATTATTCCATTTGAGAAAGCTTCCTATGGCATGACATATGCTGACACAAATAAAGATGGTCTTATCAACGAGGCTGAACTTGACAAACTCGTTGATTATGCTCAGAAATTTATGAGGAAGAAATGA ATGTTTATCCCCAAACTGCAAGCTTCCATGGCTAAGTATGAAGCAAGCGAGATGATCAAGAAGAATACTAGAAATGGTGATAATGTTGAACTAAAAGCTTTTAGTGGCATTACTCGAGCTTCAACTCAAGTCAACAATCAAGGCATGGTACCAGAAATCCTTAGAAATAATAAGAATGTCGGGCCCAAGCTTAGTTCAAATACTCATCTAAAGGCATCAAATATGCAATTTAGTCGAGAGCAGATGAAGGAGATCTTTAGATATCATGATAGTGACAGAGATGGTTTTCTCAATATAAGAGAGCTAACAAAGGCTTTTGCTTTTCTAGGCTCAATTATTCCATTTGAGAAAGCTTCCTATGGCATGACATATGCTGACACAAATAAAGATGGTCTTATCAACGAGGCTGAACTTGACAAACTCGTTGATTATGCTCAGAAATTTATGAGGAAGAAATGA ATGTTTATCCCCAAACTGCAAGCTTCCATGGCTAAGTATGAAGCAAGCGAGATGATCAAGAAGAATACTAGAAATGGTGATAATGTTGAACTAAAAGCTTTTAGTGGCATTACTCGAGCTTCAACTCAAGTCAACAATCAAGGCATGGTACCAGAAATCCTTAGAAATAATAAGAATGTCGGGCCCAAGCTTAGTTCAAATACTCATCTAAAGGCATCAAATATGCAATTTAGTCGAGAGCAGATGAAGGAGATCTTTAGATATCATGATAGTGACAGAGATGGTTTTCTCAATATAAGAGAGCTAACAAAGGCTTTTGCTTTTCTAGGCTCAATTATTCCATTTGAGAAAGCTTCCTATGGCATGACATATGCTGACACAAATAAAGATGGTCTTATCAACGAGGCTGAACTTGACAAACTCGTTGATTATGCTCAGAAATTTATGAGGAAGAAATGA MFIPKLQASMAKYEASEMIKKNTRNGDNVELKAFSGITRASTQVNNQGMVPEILRNNKNVGPKLSSNTHLKASNMQFSREQMKEIFRYHDSDRDGFLNIRELTKAFAFLGSIIPFEKASYGMTYADTNKDGLINEAELDKLVDYAQKFMRKK
BLAST of CmaCh04G019170 vs. TrEMBL
Match: A0A0A0KLF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067670 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 2.1e-43 Identity = 102/173 (58.96%), Postives = 122/173 (70.52%), Query Frame = 1
BLAST of CmaCh04G019170 vs. TrEMBL
Match: A0A0A0KIY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G068170 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 6.5e-40 Identity = 96/176 (54.55%), Postives = 120/176 (68.18%), Query Frame = 1
BLAST of CmaCh04G019170 vs. TrEMBL
Match: A0A0A0KMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G067410 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 1.4e-39 Identity = 93/172 (54.07%), Postives = 119/172 (69.19%), Query Frame = 1
BLAST of CmaCh04G019170 vs. TrEMBL
Match: A0A0A0LRC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359950 PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 4.1e-34 Identity = 89/172 (51.74%), Postives = 117/172 (68.02%), Query Frame = 1
BLAST of CmaCh04G019170 vs. TrEMBL
Match: A0A0A0LKX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359940 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 4.4e-20 Identity = 50/80 (62.50%), Postives = 60/80 (75.00%), Query Frame = 1
BLAST of CmaCh04G019170 vs. TAIR10
Match: AT1G76650.1 (AT1G76650.1 calmodulin-like 38) HSP 1 Score: 47.4 bits (111), Expect = 9.3e-06 Identity = 26/84 (30.95%), Postives = 48/84 (57.14%), Query Frame = 1
BLAST of CmaCh04G019170 vs. NCBI nr
Match: gi|700194512|gb|KGN49689.1| (hypothetical protein Csa_5G067670 [Cucumis sativus]) HSP 1 Score: 183.3 bits (464), Expect = 3.1e-43 Identity = 102/173 (58.96%), Postives = 122/173 (70.52%), Query Frame = 1
BLAST of CmaCh04G019170 vs. NCBI nr
Match: gi|700194513|gb|KGN49690.1| (hypothetical protein Csa_5G068170 [Cucumis sativus]) HSP 1 Score: 171.8 bits (434), Expect = 9.3e-40 Identity = 96/176 (54.55%), Postives = 120/176 (68.18%), Query Frame = 1
BLAST of CmaCh04G019170 vs. NCBI nr
Match: gi|700194510|gb|KGN49687.1| (hypothetical protein Csa_5G067410 [Cucumis sativus]) HSP 1 Score: 170.6 bits (431), Expect = 2.1e-39 Identity = 93/172 (54.07%), Postives = 119/172 (69.19%), Query Frame = 1
BLAST of CmaCh04G019170 vs. NCBI nr
Match: gi|449470190|ref|XP_004152801.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis sativus]) HSP 1 Score: 152.5 bits (384), Expect = 5.8e-34 Identity = 89/172 (51.74%), Postives = 117/172 (68.02%), Query Frame = 1
BLAST of CmaCh04G019170 vs. NCBI nr
Match: gi|659089539|ref|XP_008445564.1| (PREDICTED: probable calcium-binding protein CML11 [Cucumis melo]) HSP 1 Score: 141.0 bits (354), Expect = 1.8e-30 Identity = 85/171 (49.71%), Postives = 112/171 (65.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |