CmaCh04G019100 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G019100
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Short-chain dehydrogenase/reductase
Location	Cma_Chr04 : 10080990 .. 10081593 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGAGGTGGATGCACAAGAATTTGATAATGTGATTGATACCAACGTGAAAGGAATAGCCAATGTTATGCGTCATTTCATTCCTCTTATGATTTCTAGCAACCAAGGGATTATCATCAACATGTCTTCAATTTTGGGGAGAACTGCACAACAACAGGTATTTATTAATGAAACTAAACTAGGAAGAGTTATTTAAGTTTGTTAACTAATACTCCTTGTATTTTGCAGTGTTCACCATATTGTGCATCAAAATGGGCGGTTGAAGGACTAAGCAAAGCCACGGCAAAAGATGTCCCGGAGGGAATGGCAATTGTGAGCTTAGATCCGGGCATCATATATACCGACATGCTTGTCTCTTTTGTCGGTGATATTGCTCTTCAATATCAATCGCCTCAACATTGGTAAGAAACCTAATATTTCAGTTTAACACAATTGGTAAGCAGGTTCAAGGTTGTTTTAAGACTTCAACGCATTTGCATATTTGATTTTATTGTTGTTGAAGGGCTTCCAAAGCAGCCACCATGATTCTTAATCTTACTCCACTAGACAATGGAGCATCTCTCACCGTTGAAGATCCAGGCACTTTTCCCAATTCTGAGTAA

mRNA sequence

ATGTGGGAGGTGGATGCACAAGAATTTGATAATGTGATTGATACCAACGTGAAAGGAATAGCCAATGTTATGCGTCATTTCATTCCTCTTATGATTTCTAGCAACCAAGGGATTATCATCAACATGTCTTCAATTTTGGGGAGAACTGCACAACAACAGTGTTCACCATATTGTGCATCAAAATGGGCGGTTGAAGGACTAAGCAAAGCCACGGCAAAAGATGTCCCGGAGGGAATGGCAATTGTGAGCTTAGATCCGGGCATCATATATACCGACATGCTTGTCTCTTTTGTCGGTGATATTGCTCTTCAATATCAATCGCCTCAACATTGGGCTTCCAAAGCAGCCACCATGATTCTTAATCTTACTCCACTAGACAATGGAGCATCTCTCACCGTTGAAGATCCAGGCACTTTTCCCAATTCTGAGTAA

Coding sequence (CDS)

ATGTGGGAGGTGGATGCACAAGAATTTGATAATGTGATTGATACCAACGTGAAAGGAATAGCCAATGTTATGCGTCATTTCATTCCTCTTATGATTTCTAGCAACCAAGGGATTATCATCAACATGTCTTCAATTTTGGGGAGAACTGCACAACAACAGTGTTCACCATATTGTGCATCAAAATGGGCGGTTGAAGGACTAAGCAAAGCCACGGCAAAAGATGTCCCGGAGGGAATGGCAATTGTGAGCTTAGATCCGGGCATCATATATACCGACATGCTTGTCTCTTTTGTCGGTGATATTGCTCTTCAATATCAATCGCCTCAACATTGGGCTTCCAAAGCAGCCACCATGATTCTTAATCTTACTCCACTAGACAATGGAGCATCTCTCACCGTTGAAGATCCAGGCACTTTTCCCAATTCTGAGTAA

Protein sequence

MWEVDAQEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCASKWAVEGLSKATAKDVPEGMAIVSLDPGIIYTDMLVSFVGDIALQYQSPQHWASKAATMILNLTPLDNGASLTVEDPGTFPNSE

Homology

[Close]

BLAST of CmaCh04G019100 vs. Swiss-Prot
Match: PTALR_ARATH (NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.6e-44
Identity = 86/133 (64.66%), Postives = 107/133 (80.45%), Query Frame = 1


Query: 1   MWEVDAQEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCAS 60
           +WEV A++FDNV+DTNVKG+ANV+RHFIPLM+   QGII+NMSS  GR+     +PYCAS
Sbjct: 110 IWEVSAEDFDNVMDTNVKGVANVLRHFIPLMLPRKQGIIVNMSSGWGRSGAALVAPYCAS 169

Query: 61  KWAVEGLSKATAKDVPEGMAIVSLDPGIIYTDMLVSFVGDIALQYQSPQHWASKAATMIL 120
           KWA+EGLS+A AK+V EGMA+V+L+PG+I T++L S  G+ A  YQ+P  WA KAATMIL
Sbjct: 170 KWAIEGLSRAVAKEVVEGMAVVALNPGVINTELLTSCFGNSASLYQAPDAWAVKAATMIL 229

Query: 121 NLTPLDNGASLTV 134
           NLT  DNG SLTV
Sbjct: 230 NLTAGDNGGSLTV 242

[Close]

BLAST of CmaCh04G019100 vs. Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 3.2e-10
Identity = 34/88 (38.64%), Postives = 56/88 (63.64%), Query Frame = 1


Query: 7   QEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCASKWAVEG 66
           QE+D+VIDTN+KG+ N ++   P M+    G IIN+SS++G       + Y A+K  V G
Sbjct: 104 QEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIG 163

Query: 67  LSKATAKDV-PEGMAIVSLDPGIIYTDM 94
           L+K+ A+++   G+ + ++ PG I +DM
Sbjct: 164 LTKSAARELASRGITVNAVAPGFIVSDM 191

[Close]

BLAST of CmaCh04G019100 vs. Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.2e-10
Identity = 34/88 (38.64%), Postives = 56/88 (63.64%), Query Frame = 1


Query: 7   QEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCASKWAVEG 66
           QE+D+VIDTN+KG+ N ++   P M+    G IIN+SS++G       + Y A+K  V G
Sbjct: 104 QEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIG 163

Query: 67  LSKATAKDV-PEGMAIVSLDPGIIYTDM 94
           L+K+ A+++   G+ + ++ PG I +DM
Sbjct: 164 LTKSAARELASRGITVNAVAPGFIVSDM 191

[Close]

BLAST of CmaCh04G019100 vs. Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.2e-10
Identity = 34/88 (38.64%), Postives = 56/88 (63.64%), Query Frame = 1


Query: 7   QEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCASKWAVEG 66
           QE+D+VIDTN+KG+ N ++   P M+    G IIN+SS++G       + Y A+K  V G
Sbjct: 104 QEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIG 163

Query: 67  LSKATAKDV-PEGMAIVSLDPGIIYTDM 94
           L+K+ A+++   G+ + ++ PG I +DM
Sbjct: 164 LTKSAARELASRGITVNAVAPGFIVSDM 191

[Close]

BLAST of CmaCh04G019100 vs. Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.2e-10
Identity = 34/88 (38.64%), Postives = 56/88 (63.64%), Query Frame = 1


Query: 7   QEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCASKWAVEG 66
           QE+D+VIDTN+KG+ N ++   P M+    G IIN+SS++G       + Y A+K  V G
Sbjct: 104 QEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIG 163

Query: 67  LSKATAKDV-PEGMAIVSLDPGIIYTDM 94
           L+K+ A+++   G+ + ++ PG I +DM
Sbjct: 164 LTKSAARELASRGITVNAVAPGFIVSDM 191

[Close]

BLAST of CmaCh04G019100 vs. TrEMBL
Match: A0A0A0KMF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G002570 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.4e-47
Identity = 94/136 (69.12%), Postives = 114/136 (83.82%), Query Frame = 1


Query: 1   MWEVDAQEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCAS 60
           +WE+DA+EFDNVIDTNVKGIAN++RHFIPLMI +N GII+NMSS  GR+A +  +PYC+S
Sbjct: 119 IWELDAEEFDNVIDTNVKGIANILRHFIPLMIQNNNGIIVNMSSGAGRSAHEDFAPYCSS 178

Query: 61  KWAVEGLSKATAKDVPEGMAIVSLDPGIIYTDMLVSFVGDIALQYQSPQHWASKAATMIL 120
           KWAVEGLSK  AK +P+GMAIV+L+PG I+TDML   +GD A Q+QSP  WA KAATMIL
Sbjct: 179 KWAVEGLSKCIAKGLPDGMAIVALNPGSIHTDMLHLCLGDSAAQFQSPHKWAIKAATMIL 238

Query: 121 NLTPLDNGASLTVEDP 137
           +LTP DNG SLTV +P
Sbjct: 239 DLTPKDNGESLTVNNP 254

[Close]

BLAST of CmaCh04G019100 vs. TrEMBL
Match: A0A0A0KJF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G070680 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.1e-46
Identity = 90/142 (63.38%), Postives = 117/142 (82.39%), Query Frame = 1


Query: 1   MWEVDAQEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCAS 60
           +WE+  +EFD+VIDTN+KG AN++RHFIPL++  N+GII+N+SSI GR      SPYC+S
Sbjct: 102 IWEISREEFDDVIDTNIKGTANILRHFIPLLLPKNKGIIVNISSIFGRMGVPLVSPYCSS 161

Query: 61  KWAVEGLSKATAKDVPEGMAIVSLDPGIIYTDMLVSFVG-DIALQYQSPQHWASKAATMI 120
           KW +EGLSK+ AK++P GM IV+LDPGII+T+ML+S +G +IA QYQ+PQ WA KAA MI
Sbjct: 162 KWGIEGLSKSIAKELPNGMTIVALDPGIIHTEMLLSSLGNNIASQYQTPQEWALKAAPMI 221

Query: 121 LNLTPLDNGASLTVEDPGTFPN 142
           LNLT  +NGASLTV+DPGT P+
Sbjct: 222 LNLTNAENGASLTVDDPGTLPD 243

[Close]

BLAST of CmaCh04G019100 vs. TrEMBL
Match: U5GNJ2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s23710g PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.4e-44
Identity = 91/133 (68.42%), Postives = 108/133 (81.20%), Query Frame = 1


Query: 1   MWEVDAQEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCAS 60
           +WEV  +EFD+VIDTNVKGIAN++RHFIPLMI + QGII+NMSS  GR+     +PYCAS
Sbjct: 119 IWEVSEEEFDSVIDTNVKGIANMLRHFIPLMIPNKQGIIVNMSSGWGRSGAALVAPYCAS 178

Query: 61  KWAVEGLSKATAKDVPEGMAIVSLDPGIIYTDMLVSFVGDIALQYQSPQHWASKAATMIL 120
           KWAVEGLS++ AK++PEGMAIV+L+PG+I+TDML S  G  A  YQ P  WA KAATMIL
Sbjct: 179 KWAVEGLSRSVAKELPEGMAIVALNPGVIHTDMLTSCFGTSASLYQDPDTWALKAATMIL 238

Query: 121 NLTPLDNGASLTV 134
           NLT  DNGASLTV
Sbjct: 239 NLTEADNGASLTV 251

[Close]

BLAST of CmaCh04G019100 vs. TrEMBL
Match: W9QIQ8_9ROSA (3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Morus notabilis GN=L484_016160 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.1e-44
Identity = 91/133 (68.42%), Postives = 109/133 (81.95%), Query Frame = 1


Query: 1   MWEVDAQEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCAS 60
           +WEV  +EFD VI TNVKGIANV+RHFIPLM+   QGII+NMSS  GR+     +PYCAS
Sbjct: 225 IWEVTEEEFDTVISTNVKGIANVLRHFIPLMLPKKQGIIVNMSSGWGRSGAALVAPYCAS 284

Query: 61  KWAVEGLSKATAKDVPEGMAIVSLDPGIIYTDMLVSFVGDIALQYQSPQHWASKAATMIL 120
           KWAVEGL+++ AK++PEGMAIV+L+PG+I TDMLVS  G+ A  YQ+P+ WASKAATMIL
Sbjct: 285 KWAVEGLTRSVAKELPEGMAIVALNPGVINTDMLVSCFGNSAELYQTPESWASKAATMIL 344

Query: 121 NLTPLDNGASLTV 134
           NLT  DNGASLTV
Sbjct: 345 NLTVADNGASLTV 357

[Close]

BLAST of CmaCh04G019100 vs. TrEMBL
Match: F6HK04_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g01780 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43
Identity = 90/133 (67.67%), Postives = 108/133 (81.20%), Query Frame = 1


Query: 1   MWEVDAQEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCAS 60
           +WEV  +EFD VIDTNVKG ANVMR FIPLMI + QGII+NMSS  GR+A  Q +PYCAS
Sbjct: 132 IWEVPEEEFDTVIDTNVKGTANVMRQFIPLMIENKQGIIVNMSSGWGRSAAAQVAPYCAS 191

Query: 61  KWAVEGLSKATAKDVPEGMAIVSLDPGIIYTDMLVSFVGDIALQYQSPQHWASKAATMIL 120
           KWAVEGLS++ AK++P G+AIV+L+PG+I TDML+S  G  A  YQ+P+ WA KAA+MIL
Sbjct: 192 KWAVEGLSRSVAKELPSGLAIVALNPGVINTDMLMSCFGGSAALYQTPESWAPKAASMIL 251

Query: 121 NLTPLDNGASLTV 134
           NLT  DNGASLTV
Sbjct: 252 NLTAADNGASLTV 264

[Close]

BLAST of CmaCh04G019100 vs. TAIR10
Match: AT1G10310.1 (AT1G10310.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 179.5 bits (454), Expect = 1.5e-45
Identity = 86/133 (64.66%), Postives = 107/133 (80.45%), Query Frame = 1


Query: 1   MWEVDAQEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCAS 60
           +WEV A++FDNV+DTNVKG+ANV+RHFIPLM+   QGII+NMSS  GR+     +PYCAS
Sbjct: 110 IWEVSAEDFDNVMDTNVKGVANVLRHFIPLMLPRKQGIIVNMSSGWGRSGAALVAPYCAS 169

Query: 61  KWAVEGLSKATAKDVPEGMAIVSLDPGIIYTDMLVSFVGDIALQYQSPQHWASKAATMIL 120
           KWA+EGLS+A AK+V EGMA+V+L+PG+I T++L S  G+ A  YQ+P  WA KAATMIL
Sbjct: 170 KWAIEGLSRAVAKEVVEGMAVVALNPGVINTELLTSCFGNSASLYQAPDAWAVKAATMIL 229

Query: 121 NLTPLDNGASLTV 134
           NLT  DNG SLTV
Sbjct: 230 NLTAGDNGGSLTV 242

[Close]

BLAST of CmaCh04G019100 vs. TAIR10
Match: AT3G51680.1 (AT3G51680.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 49.3 bits (116), Expect = 2.3e-06
Identity = 33/96 (34.38%), Postives = 53/96 (55.21%), Query Frame = 1


Query: 3   EVDAQEFDNVIDTNVKGIANVMRHFIPLMISSN-QGIIINMSSILGRTAQQQCSPYCASK 62
           + DA EFD+V+  NV+G+   M+H    MI    +G II+ +S+ G         Y ASK
Sbjct: 135 DFDADEFDHVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASK 194

Query: 63  WAVEGLSKATAKDVPE-GMAIVSLDPGIIYTDMLVS 97
            A+ GL+K  A ++ + G+ +  + P  + T MLV+
Sbjct: 195 HAIVGLTKNAACELGKYGIRVNCISPFGVATSMLVN 230

[Close]

BLAST of CmaCh04G019100 vs. TAIR10
Match: AT4G03140.1 (AT4G03140.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 47.4 bits (111), Expect = 8.8e-06
Identity = 26/73 (35.62%), Postives = 40/73 (54.79%), Query Frame = 1


Query: 3   EVDAQEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCASKW 62
           ++D   FD VI+TNV+G+   ++H   +MI  N G II   S+ G         Y  SK 
Sbjct: 174 DLDLNVFDKVINTNVRGVMAGIKHAARVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKS 233

Query: 63  AVEGLSKATAKDV 76
           AV G+ ++TA ++
Sbjct: 234 AVIGIVRSTASEL 246

[Close]

BLAST of CmaCh04G019100 vs. NCBI nr
Match: gi|659129579|ref|XP_008464744.1| (PREDICTED: uncharacterized oxidoreductase YMR226C-like [Cucumis melo])

HSP 1 Score: 233.4 bits (594), Expect = 2.4e-58
Identity = 114/141 (80.85%), Postives = 124/141 (87.94%), Query Frame = 1


Query: 1   MWEVDAQEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCAS 60
           MWE+DA EFDNVIDTNVKGIANVMRHFIPLMISSN+GIIINMSS+ GR + +  +PYCAS
Sbjct: 113 MWELDAHEFDNVIDTNVKGIANVMRHFIPLMISSNKGIIINMSSMAGRDSHELIAPYCAS 172

Query: 61  KWAVEGLSKATAKDVPEGMAIVSLDPGIIYTDMLVSFVGDIALQYQSPQHWASKAATMIL 120
           KW VEGLSKA AK+VPEGM IVSLDPG+IYTDML+S + D A  YQSPQHWASKAATMIL
Sbjct: 173 KWGVEGLSKAIAKEVPEGMGIVSLDPGLIYTDMLLSCLPDFAPNYQSPQHWASKAATMIL 232

Query: 121 NLTPLDNGASLTVEDPGTFPN 142
           NLT L NGASLTVEDPGT PN
Sbjct: 233 NLTALHNGASLTVEDPGTLPN 253

[Close]

BLAST of CmaCh04G019100 vs. NCBI nr
Match: gi|449462820|ref|XP_004149138.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 9.3e-58
Identity = 113/142 (79.58%), Postives = 125/142 (88.03%), Query Frame = 1


Query: 1   MWEVDAQEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCAS 60
           +WE+DAQEFDNVIDTNVKGIAN+MRHFIPLMISSN+GIIINMSSI GR A++  +PYCAS
Sbjct: 112 IWELDAQEFDNVIDTNVKGIANIMRHFIPLMISSNKGIIINMSSIAGRDARELIAPYCAS 171

Query: 61  KWAVEGLSKATAKDVPEGMAIVSLDPGIIYTDMLVSFVGDIALQYQSPQHWASKAATMIL 120
           KW VEGLSKA AK+VPEGM IVSLDPG+I+TDML+S + D A  YQSPQHWASKAATMIL
Sbjct: 172 KWGVEGLSKAIAKEVPEGMGIVSLDPGLIFTDMLLSCLPDSAPNYQSPQHWASKAATMIL 231

Query: 121 NLTPLDNGASLTVEDPGTFPNS 143
           NLT LDNG SLTVEDPG  P S
Sbjct: 232 NLTALDNGTSLTVEDPGIVPKS 253

[Close]

BLAST of CmaCh04G019100 vs. NCBI nr
Match: gi|449462804|ref|XP_004149130.1| (PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 1.9e-47
Identity = 94/136 (69.12%), Postives = 114/136 (83.82%), Query Frame = 1


Query: 1   MWEVDAQEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCAS 60
           +WE+DA+EFDNVIDTNVKGIAN++RHFIPLMI +N GII+NMSS  GR+A +  +PYC+S
Sbjct: 119 IWELDAEEFDNVIDTNVKGIANILRHFIPLMIQNNNGIIVNMSSGAGRSAHEDFAPYCSS 178

Query: 61  KWAVEGLSKATAKDVPEGMAIVSLDPGIIYTDMLVSFVGDIALQYQSPQHWASKAATMIL 120
           KWAVEGLSK  AK +P+GMAIV+L+PG I+TDML   +GD A Q+QSP  WA KAATMIL
Sbjct: 179 KWAVEGLSKCIAKGLPDGMAIVALNPGSIHTDMLHLCLGDSAAQFQSPHKWAIKAATMIL 238

Query: 121 NLTPLDNGASLTVEDP 137
           +LTP DNG SLTV +P
Sbjct: 239 DLTPKDNGESLTVNNP 254

[Close]

BLAST of CmaCh04G019100 vs. NCBI nr
Match: gi|659129575|ref|XP_008464742.1| (PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X3 [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 3.3e-47
Identity = 92/136 (67.65%), Postives = 114/136 (83.82%), Query Frame = 1


Query: 1   MWEVDAQEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCAS 60
           +WE++A+EFDNVIDTNVKGIAN++RHF+PLMI +N GII+NMSS  GR+A +  +PYC+S
Sbjct: 95  IWELEAEEFDNVIDTNVKGIANILRHFVPLMIQNNNGIIVNMSSGAGRSAHEDFAPYCSS 154

Query: 61  KWAVEGLSKATAKDVPEGMAIVSLDPGIIYTDMLVSFVGDIALQYQSPQHWASKAATMIL 120
           KWAVEGL+K  AK +P+GMAIV+L+PG I+TDMLV   GD A Q+QSP  WA KAATMIL
Sbjct: 155 KWAVEGLTKCVAKGLPDGMAIVALNPGSIHTDMLVLCCGDSAAQFQSPHKWAIKAATMIL 214

Query: 121 NLTPLDNGASLTVEDP 137
           +LTP DNG SLTV +P
Sbjct: 215 DLTPKDNGESLTVNNP 230

[Close]

BLAST of CmaCh04G019100 vs. NCBI nr
Match: gi|659129577|ref|XP_008464743.1| (PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X4 [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 3.3e-47
Identity = 92/136 (67.65%), Postives = 114/136 (83.82%), Query Frame = 1


Query: 1   MWEVDAQEFDNVIDTNVKGIANVMRHFIPLMISSNQGIIINMSSILGRTAQQQCSPYCAS 60
           +WE++A+EFDNVIDTNVKGIAN++RHF+PLMI +N GII+NMSS  GR+A +  +PYC+S
Sbjct: 91  IWELEAEEFDNVIDTNVKGIANILRHFVPLMIQNNNGIIVNMSSGAGRSAHEDFAPYCSS 150

Query: 61  KWAVEGLSKATAKDVPEGMAIVSLDPGIIYTDMLVSFVGDIALQYQSPQHWASKAATMIL 120
           KWAVEGL+K  AK +P+GMAIV+L+PG I+TDMLV   GD A Q+QSP  WA KAATMIL
Sbjct: 151 KWAVEGLTKCVAKGLPDGMAIVALNPGSIHTDMLVLCCGDSAAQFQSPHKWAIKAATMIL 210

Query: 121 NLTPLDNGASLTVEDP 137
           +LTP DNG SLTV +P
Sbjct: 211 DLTPKDNGESLTVNNP 226

The following BLAST results are available for this feature:

BLAST of CmaCh04G019100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PTALR_ARATH	2.6e-44	64.66	NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 P...	[more]
FABG_STAAC	3.2e-10	38.64	3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain...	[more]
FABG_STAAM	3.2e-10	38.64	3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain...	[more]
FABG_STAAW	3.2e-10	38.64	3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain...	[more]
FABG_STAAN	3.2e-10	38.64	3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Staphylococcus aureus (strain...	[more]

BLAST of CmaCh04G019100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMF3_CUCSA	1.4e-47	69.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G002570 PE=3 SV=1	[more]
A0A0A0KJF0_CUCSA	1.1e-46	63.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G070680 PE=3 SV=1	[more]
U5GNJ2_POPTR	2.4e-44	68.42	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s23710g PE=3 SV=1	[more]
W9QIQ8_9ROSA	3.1e-44	68.42	3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Morus notabilis GN=L484_01616...	[more]
F6HK04_VITVI	1.2e-43	67.67	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g01780 PE=3 SV=...	[more]

BLAST of CmaCh04G019100 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10310.1	1.5e-45	64.66	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G51680.1	2.3e-06	34.38	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT4G03140.1	8.8e-06	35.62	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of CmaCh04G019100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659129579\|ref\|XP_008464744.1\|	2.4e-58	80.85	PREDICTED: uncharacterized oxidoreductase YMR226C-like [Cucumis melo]	[more]
gi\|449462820\|ref\|XP_004149138.1\|	9.3e-58	79.58	PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus]	[more]
gi\|449462804\|ref\|XP_004149130.1\|	1.9e-47	69.12	PREDICTED: NADPH-dependent pterin aldehyde reductase-like [Cucumis sativus]	[more]
gi\|659129575\|ref\|XP_008464742.1\|	3.3e-47	67.65	PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X3 [Cucumis melo]	[more]
gi\|659129577\|ref\|XP_008464743.1\|	3.3e-47	67.65	PREDICTED: uncharacterized oxidoreductase YMR226C-like isoform X4 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002347	SDR_fam
IPR016040	NAD(P)-bd_dom
IPR020904	Sc_DH/Rdtase_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042335	cuticle development
biological_process	GO:0006760	folic acid-containing compound metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009409	response to cold
biological_process	GO:0000038	very long-chain fatty acid metabolic process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G019100.1	CmaCh04G019100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00080	SDRFAMILY	coord: 57..76 score: 3.4E-5coord: 37..45 score: 3.
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 57..76 score: 2.1E-11coord: 77..94 score: 2.1E-11coord: 31..47 score: 2.1
IPR002347	Short-chain dehydrogenase/reductase SDR	PANTHER	PTHR24322	FAMILY NOT NAMED	coord: 57..87 score: 3.9E-36coord: 1..41 score: 3.9
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 3..96 score: 3.4
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 2..125 score: 1.1
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 2..123 score: 1.81
IPR020904	Short-chain dehydrogenase/reductase, conserved site	PROSITE	PS00061	ADH_SHORT	coord: 44..72 scor
None	No IPR available	PANTHER	PTHR24322:SF500	SUBFAMILY NOT NAMED	coord: 57..87 score: 3.9E-36coord: 1..41 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G019100	Cla001913	Watermelon (97103) v1	cmawmB745
CmaCh04G019100	CsaV3_5G013930	Cucumber (Chinese Long) v3	cmacucB0880

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G019100	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G019100	Wild cucumber (PI 183967)	cmacpiB767
CmaCh04G019100	Cucumber (Chinese Long) v2	cmacuB760
CmaCh04G019100	Melon (DHL92) v3.5.1	cmameB646
CmaCh04G019100	Watermelon (Charleston Gray)	cmawcgB622
CmaCh04G019100	Watermelon (Charleston Gray)	cmawcgB628
CmaCh04G019100	Watermelon (97103) v1	cmawmB733
CmaCh04G019100	Watermelon (97103) v1	cmawmB735
CmaCh04G019100	Watermelon (97103) v1	cmawmB739
CmaCh04G019100	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G019100	Cucurbita pepo (Zucchini)	cmacpeB725
CmaCh04G019100	Cucurbita pepo (Zucchini)	cmacpeB732
CmaCh04G019100	Bottle gourd (USVL1VR-Ls)	cmalsiB635
CmaCh04G019100	Cucumber (Gy14) v2	cgybcmaB667
CmaCh04G019100	Cucumber (Gy14) v2	cgybcmaB691
CmaCh04G019100	Melon (DHL92) v3.6.1	cmamedB730
CmaCh04G019100	Cucumber (Chinese Long) v3	cmacucB0903
CmaCh04G019100	Watermelon (97103) v2	cmawmbB726
CmaCh04G019100	Watermelon (97103) v2	cmawmbB734
CmaCh04G019100	Wax gourd	cmawgoB0913
CmaCh04G019100	Wax gourd	cmawgoB0876
CmaCh04G019100	Wax gourd	cmawgoB0904