CmaCh04G018800 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGGATCCTCCGACAACATCATCGGAGCCACCGCATCAGCAGCAGCACCACCCCCACCCCACCCACCACCACCACCACCCCCACCACCACCAACAACAACAACAACAACAACTCCTACATTTGCCGCTAATCCATGGCGGCGCCGCCCGAATCAACACAGCAGCAGCAACCTCCTCCTCCACAGTAATAGTCCGAGAGTACCGCAAAGGAAACTGGACTCTCCAAGAGACAATGATTCTAATAACCGCCAAAAAGCTAGACGACGAGCGGCGGAACAAGGTAACCTTAGCTCCTCCGGCGGATCCAACAGCCAGAAAGGGCGGTGAACTACGGTGGAAATGGGTTGAAAACTACTGCTGGAGCCACGGATGTCACCGCAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTCCTCCGCGACTACAAAAAAGTCCGCGAGTACGAATCCCGCGCGTGTGACCAACAATCCCAAATTCCCTCTTACTGGAAAATGGAGAAACACGAGCGTAAGGACAACAATCTTCCTTCCAATATGGCGTTTGAGGTTTATCAAGCCTTAAACGACGTCGTCCAGAGGAAGTTCTCGCAAAGACCTGTTATTTCCCATACTACCCCTACTCCCCTTGTTGCTCTTCCACCTGCTCCGCCTCCTTCCTCCGCCATCCCCGCCCTTCCCCCGCCACCACCCACGACGGCGACCAATTCCTCCCCGGCGGTTTCAGGTGAGTCTGTTTTGTTTTTGTTCTTTTGTGCGTGATACTGNNNNNNNCCCCCCCCCCCCCCCCCAAGTCCTGGACCTTTCATTTACTAAAAATAAATAAAATTGTTTTTTATAATTTTATTTAAAAAAAAAAAGGAGAGAGAAAAGAGTTAATATTTTGGGTCAAAGTTGCAGGGTTTGACTCTGCCACAAATTTTAATAGGACCCTCTCACCGTAGTGTTCTTCCTTTTCATTTCGTTATTCCTTTTCTAATCCCCTACGCTCACCTGCATGGCTTTACAAATGCACCCTCCAAATCTCACCCTTCGATTGCATTACTTCATCAACTCATCCAGCGGTTGGGATTTGGGGGTAGAATTCGAAATTGCAAAAGCTGGGGGGCAAGAATGATAAATAATGTATACTATTGGGAATGGAGAAAGACAATGATGAACTTGTGGTGATGAGATTGAGATCGTGGGGAGATCCTTTTGGGTATCTAAAACAACAACGACAATTATAATACAAATCCCCTTTTAAGGTTAATATTAAATTATATATATATATATATATTTTTTTTTTAAATTTTAAGATACGATAATACAATATGGTCCCTTCAATCTAAGCATGCAATGCAAAACTCCCTTTTCAGCCTTTCCATAATTAAATATTATGCAAAAAAATAAAATAAAATAACCCTATCTCTTGATTTTTTTTTTTTTTTTTTTTAGTATTATATGTTTATTAATTACTCGGGTTTCTATGACTTAAAAACTCAAAGTGTCATGTTTTGTTTTAGTTTGAGTTGACTTGGTTAGTTCATGGGTTGACATCTTTTGGTCGAGTCAATCCGACCATTCCAAAAATAGGGTTATAACAAAACTAAATCTGATTTTTCAGGTTTAAGTAACTAATAAGATCAATTCGAAATTTCTAAATTGGTTTAAGAGATTAACCCAATTCAATCCGTATATATTTTTAGTTGATTAATTATGACGAGAAAAATTAGTAATTAATTGTATGTGTGTGTGTAGAATCATCCTCATCGGGTACGGAGTCGAGTGAGAAGAAAGAGAAGGCGGAGGCAAAGAGGAGGAAAATGGAAGATAATATTGAGAGAAGCGCTGCAATGTTGGCTCAAACGCTGCGGAGCTGCGAGGAGCAAAGGGAGATCCGACACCAAGAGGTTATGGAGGTTCAAAAACGTTGCCTTCAAATCGAAGAAGCGCGCAACCACATTCACCGCCAAGGCATTAGCGACATGGTGGCTGCCATCGCCAACCTCTCGGCTGGTATGAATACTCCTTATTCCTATTGCCATGCATGGGCATGCAAGCGTTTTTGTTTACAAAATAAGATTGTGAGTACAGAAATAGATGATAGAGAAAGAAGAAGGTCGGAAGGATATGAATGTTCATACAATGGAGAAGAGGTGAGAATGTTGAAACAACAAAATGAAGCAATGCAAGCTGAGGTTATGAATGTGAAGACTGAGCTTTCCCAACTTAGAGACCAAATGCCATCACTCATGCAAACCATGATGCACAATATGCTCCACAACATCCCTCCTCCTCCTCCTCCTTCCATGGTACTCTCTCTCTCTCTCTATTCATTCATATAATCACGATCCTAAAACCTAATACTATAGAGATCATCATGTTAATTGTGTTTTATGGTATGGATAGAGATAAAGTGGATGTAACCGCTCAAGCCCACCGCTAGTAGATATTGTCTTCTTTGGACTTTCCCTATCGGGCTTACCCTCAAGGTTTTTAAAAACACGTCTACTCGACAGAGGTTTTCACACCCTTATAAAGAATATTTCGTTACCCTCTCCAATCTATGTGGTATCTCACAATCCACCCCCTTTAGAGCCCAACATTCTCGCTAACACTCTGGTGTCTGGCTCTGATACTATTTGTAACAGCCCAAGCCCACTGATAGCAAATATTGTTCTCTTTGGGTTTTCTCTTTCGGGCTTACTCAAGGTTTTTAAAACGAGTTTGATAGGAAGAGTTTTCCACACCCCTTATAAAGAATGTTTCGTTCTCCTCTCTTTGGGTTTTCTCTTTCGGGCTTACTCAAGGTTTTTAAAACGAGTTTGATAGGAAGAATTTTCCACACCCCTTATAAAGAATGTTTCGTTCTCCTCTCTTTGGGTTTTCTCTTTCGGGCTTACTCAAGGTTTTTAAAACGAGTTTGATAGGAAGAATTTTCCACACCCCTTATAAAGAATGTTTCGTTCTCCTCTCTTTGGGTTTTCTCTTTCGGGCTTACTCAAGGTTTTTAAAACGAGTTTGATAGGAAGAATTTTCCACACCCCTTATAAAGAATGTTTCATTCTCCTCTTCAATCTATGTGGTATCTCACAATCTACCTTCCTTCAGAGCTCAACATCCTAGCTAGCACACTGTCTGGTGTCTGGCTCTAATATCATTTGTAATAATCCAAGCCCACCGAGATATTGTCCTCTTTGGGTTTTCTCTTTCGGATTTACTCAAACTTTTTAAAACGTGTTTGCTAGGGAGAGTTTTTCACACCCTTATAAAGGGTGTTTCTTTCTCCTCTTTAATTGATGTGGGATTTCAGAGTACTCATTCTTAGGATTAAATTTGATAAAATTATTGACTTTTAGAGTCGTAATTAAAGTGATAATGCATGTTTTGATCAGTAATATATGATTTGGTATATATTTTTGCTTGTTTTGATGTGCATAGGACCCATCTGGATCAGGAGGAGATGCTTAGAAAGGATTCTCGACCGTTCACGAT ATGTCGGATCCTCCGACAACATCATCGGAGCCACCGCATCAGCAGCAGCACCACCCCCACCCCACCCACCACCACCACCACCCCCACCACCACCAACAACAACAACAACAACAACTCCTACATTTGCCGCTAATCCATGGCGGCGCCGCCCGAATCAACACAGCAGCAGCAACCTCCTCCTCCACAGTAATAGTCCGAGAGTACCGCAAAGGAAACTGGACTCTCCAAGAGACAATGATTCTAATAACCGCCAAAAAGCTAGACGACGAGCGGCGGAACAAGGTAACCTTAGCTCCTCCGGCGGATCCAACAGCCAGAAAGGGCGGTGAACTACGGTGGAAATGGGTTGAAAACTACTGCTGGAGCCACGGATGTCACCGCAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTCCTCCGCGACTACAAAAAAGTCCGCGAGTACGAATCCCGCGCGTGTGACCAACAATCCCAAATTCCCTCTTACTGGAAAATGGAGAAACACGAGCGTAAGGACAACAATCTTCCTTCCAATATGGCGTTTGAGGTTTATCAAGCCTTAAACGACGTCGTCCAGAGGAAGTTCTCGCAAAGACCTGTTATTTCCCATACTACCCCTACTCCCCTTGTTGCTCTTCCACCTGCTCCGCCTCCTTCCTCCGCCATCCCCGCCCTTCCCCCGCCACCACCCACGACGGCGACCAATTCCTCCCCGGCGGTTTCAGAATCATCCTCATCGGGTACGGAGTCGAGTGAGAAGAAAGAGAAGGCGGAGGCAAAGAGGAGGAAAATGGAAGATAATATTGAGAGAAGCGCTGCAATGTTGGCTCAAACGCTGCGGAGCTGCGAGGAGCAAAGGGAGATCCGACACCAAGAGGTTATGGAGGTTCAAAAACGTTGCCTTCAAATCGAAGAAGCGCGCAACCACATTCACCGCCAAGGCATTAGCGACATGGTGGCTGCCATCGCCAACCTCTCGGCTGAAATAGATGATAGAGAAAGAAGAAGGTCGGAAGGATATGAATGTTCATACAATGGAGAAGAGGTGAGAATGTTGAAACAACAAAATGAAGCAATGCAAGCTGAGGTTATGAATGTGAAGACTGAGCTTTCCCAACTTAGAGACCAAATGCCATCACTCATGCAAACCATGATGCACAATATGCTCCACAACATCCCTCCTCCTCCTCCTCCTTCCATGGACCCATCTGGATCAGGAGGAGATGCTTAGAAAGGATTCTCGACCGTTCACGAT ATGTCGGATCCTCCGACAACATCATCGGAGCCACCGCATCAGCAGCAGCACCACCCCCACCCCACCCACCACCACCACCACCCCCACCACCACCAACAACAACAACAACAACAACTCCTACATTTGCCGCTAATCCATGGCGGCGCCGCCCGAATCAACACAGCAGCAGCAACCTCCTCCTCCACAGTAATAGTCCGAGAGTACCGCAAAGGAAACTGGACTCTCCAAGAGACAATGATTCTAATAACCGCCAAAAAGCTAGACGACGAGCGGCGGAACAAGGTAACCTTAGCTCCTCCGGCGGATCCAACAGCCAGAAAGGGCGGTGAACTACGGTGGAAATGGGTTGAAAACTACTGCTGGAGCCACGGATGTCACCGCAGCCAAAATCAGTGCAACGACAAGTGGGATAACCTCCTCCGCGACTACAAAAAAGTCCGCGAGTACGAATCCCGCGCGTGTGACCAACAATCCCAAATTCCCTCTTACTGGAAAATGGAGAAACACGAGCGTAAGGACAACAATCTTCCTTCCAATATGGCGTTTGAGGTTTATCAAGCCTTAAACGACGTCGTCCAGAGGAAGTTCTCGCAAAGACCTGTTATTTCCCATACTACCCCTACTCCCCTTGTTGCTCTTCCACCTGCTCCGCCTCCTTCCTCCGCCATCCCCGCCCTTCCCCCGCCACCACCCACGACGGCGACCAATTCCTCCCCGGCGGTTTCAGAATCATCCTCATCGGGTACGGAGTCGAGTGAGAAGAAAGAGAAGGCGGAGGCAAAGAGGAGGAAAATGGAAGATAATATTGAGAGAAGCGCTGCAATGTTGGCTCAAACGCTGCGGAGCTGCGAGGAGCAAAGGGAGATCCGACACCAAGAGGTTATGGAGGTTCAAAAACGTTGCCTTCAAATCGAAGAAGCGCGCAACCACATTCACCGCCAAGGCATTAGCGACATGGTGGCTGCCATCGCCAACCTCTCGGCTGAAATAGATGATAGAGAAAGAAGAAGGTCGGAAGGATATGAATGTTCATACAATGGAGAAGAGGTGAGAATGTTGAAACAACAAAATGAAGCAATGCAAGCTGAGGTTATGAATGTGAAGACTGAGCTTTCCCAACTTAGAGACCAAATGCCATCACTCATGCAAACCATGATGCACAATATGCTCCACAACATCCCTCCTCCTCCTCCTCCTTCCATGGACCCATCTGGATCAGGAGGAGATGCTTAG MSDPPTTSSEPPHQQQHHPHPTHHHHHPHHHQQQQQQQLLHLPLIHGGAARINTAAATSSSTVIVREYRKGNWTLQETMILITAKKLDDERRNKVTLAPPADPTARKGGELRWKWVENYCWSHGCHRSQNQCNDKWDNLLRDYKKVREYESRACDQQSQIPSYWKMEKHERKDNNLPSNMAFEVYQALNDVVQRKFSQRPVISHTTPTPLVALPPAPPPSSAIPALPPPPPTTATNSSPAVSESSSSGTESSEKKEKAEAKRRKMEDNIERSAAMLAQTLRSCEEQREIRHQEVMEVQKRCLQIEEARNHIHRQGISDMVAAIANLSAEIDDRERRRSEGYECSYNGEEVRMLKQQNEAMQAEVMNVKTELSQLRDQMPSLMQTMMHNMLHNIPPPPPPSMDPSGSGGDA
BLAST of CmaCh04G018800 vs. TrEMBL
Match: A0A0A0KME8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G261720 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 2.2e-119 Identity = 252/337 (74.78%), Postives = 271/337 (80.42%), Query Frame = 1
BLAST of CmaCh04G018800 vs. TrEMBL
Match: A0A0L9TZU0_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g183900 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 2.8e-77 Identity = 188/351 (53.56%), Postives = 234/351 (66.67%), Query Frame = 1
BLAST of CmaCh04G018800 vs. TrEMBL
Match: A0A0S3SP10_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G112900 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 2.8e-77 Identity = 188/351 (53.56%), Postives = 234/351 (66.67%), Query Frame = 1
BLAST of CmaCh04G018800 vs. TrEMBL
Match: K7N4B1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G184500 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 3.6e-77 Identity = 179/331 (54.08%), Postives = 231/331 (69.79%), Query Frame = 1
BLAST of CmaCh04G018800 vs. TrEMBL
Match: A0A151SE87_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_025039 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 5.2e-76 Identity = 182/346 (52.60%), Postives = 230/346 (66.47%), Query Frame = 1
BLAST of CmaCh04G018800 vs. TAIR10
Match: AT2G35640.1 (AT2G35640.1 Homeodomain-like superfamily protein) HSP 1 Score: 193.0 bits (489), Expect = 3.7e-49 Identity = 124/320 (38.75%), Postives = 184/320 (57.50%), Query Frame = 1
BLAST of CmaCh04G018800 vs. TAIR10
Match: AT1G31310.1 (AT1G31310.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 173.7 bits (439), Expect = 2.3e-43 Identity = 88/158 (55.70%), Postives = 106/158 (67.09%), Query Frame = 1
BLAST of CmaCh04G018800 vs. TAIR10
Match: AT4G31270.1 (AT4G31270.1 sequence-specific DNA binding transcription factors) HSP 1 Score: 58.2 bits (139), Expect = 1.4e-08 Identity = 33/120 (27.50%), Postives = 63/120 (52.50%), Query Frame = 1
BLAST of CmaCh04G018800 vs. TAIR10
Match: AT2G33550.1 (AT2G33550.1 Homeodomain-like superfamily protein) HSP 1 Score: 52.8 bits (125), Expect = 6.0e-07 Identity = 72/283 (25.44%), Postives = 125/283 (44.17%), Query Frame = 1
BLAST of CmaCh04G018800 vs. NCBI nr
Match: gi|659114054|ref|XP_008456886.1| (PREDICTED: uncharacterized protein LOC103496697 [Cucumis melo]) HSP 1 Score: 561.6 bits (1446), Expect = 1.1e-156 Identity = 321/423 (75.89%), Postives = 348/423 (82.27%), Query Frame = 1
BLAST of CmaCh04G018800 vs. NCBI nr
Match: gi|778701746|ref|XP_004140413.2| (PREDICTED: trihelix transcription factor PTL-like [Cucumis sativus]) HSP 1 Score: 558.9 bits (1439), Expect = 7.3e-156 Identity = 322/422 (76.30%), Postives = 346/422 (81.99%), Query Frame = 1
BLAST of CmaCh04G018800 vs. NCBI nr
Match: gi|700195606|gb|KGN50783.1| (hypothetical protein Csa_5G261720 [Cucumis sativus]) HSP 1 Score: 437.2 bits (1123), Expect = 3.2e-119 Identity = 252/337 (74.78%), Postives = 271/337 (80.42%), Query Frame = 1
BLAST of CmaCh04G018800 vs. NCBI nr
Match: gi|920692464|gb|KOM35689.1| (hypothetical protein LR48_Vigan02g183900 [Vigna angularis]) HSP 1 Score: 297.4 bits (760), Expect = 4.0e-77 Identity = 188/351 (53.56%), Postives = 234/351 (66.67%), Query Frame = 1
BLAST of CmaCh04G018800 vs. NCBI nr
Match: gi|571568693|ref|XP_006606274.1| (PREDICTED: trihelix transcription factor ASR3-like [Glycine max]) HSP 1 Score: 297.0 bits (759), Expect = 5.2e-77 Identity = 179/331 (54.08%), Postives = 231/331 (69.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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