CmaCh04G017620 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATTCTAAATTTATACCTATTTAATTAATCTAGAAAATAACTATCTTTTCCTTGCTACCCCCACAATTATCTCTCACAAATGCGGTAGAAATTCCTATTGTCAAAAAAAGAGCAAAAGTGAATCCCAGCAAGAAGAACATCAAATTATGATCATTCACATTATATGGTGACACTAATACATAAAAATTTAATATAATTTCCAATCTAGTTATAAACATCATACATAGGAAATCCTACCCAATATTAAGGGAAAAGTTCAGATCAAAATAATCTTTTTAAAAAGTCCGAGTACTCTGTTGTTTCGCCTGACCAGACAATTCAGAAGAATCAATCAAAACAACGTTCAAGGAAAGGCTTCTTATTGTCCTACGTTTAATAGTTCAATCAACCATATATTCCTATCGCATAGTCTAAGATTCAATCATGGAAAGGCTTGAACATTGCATCAGATAATCGTATGTGAACCCATAAACGCTTAAATTATATCAAAAAGGTCTCCAGTAAGTTCAAACAGACAAAAATGAAAATTCACCAAGAACAAAAATCCCTATAACGAAGAGAAACTCAAACCTAAGCTGTAAGAACCACCGCGCCACCGGCCTCCTTAATCTTCTTCTCGGCGATCTTGGATACAAGCTTGGCCTTCACCACAATAGGCTGATTCTCCGGCAACACACCCTTGCCCAAAACCTTAAAATAACCGAACTGCGTGACATCGACCAATGGAACGTTGTCTTTGGAGGCCTTATCCTTCACTTCTTGAGGGATCAAGGACCAGATCTTGTCAACGTTGACAATCGGGCAATAGAACTTGTTGCGAAGCTTGTGGAAGTAACGCATACCGACTTTACCGAAATAACCAGGGTGATACTTATCGAAGAGAATACGATGGTGGTGCATACCTCCGGCGTTTCCCCGACCTCCAGGATGCTTTCGGTGCTTGCCGATTCTACCGTGACCGGCGCTCACATGTCCTCTCTTCTTCCTGTTCTTCTTGAATCGAGTCGTCATGGCTGA ATGGTTCAAACAGACAAAAATGAAAATTCACCAAGAACAAAAATCCCTATAACGAAGAGAAACTCAAACCTAAGCTGTAAGAACCACCGCGCCACCGGCCTCCTTAATCTTCTTCTCGGCGATCTTGGATACAAGCTTGGCCTTCACCACAATAGGCTGATTCTCCGGCAACACACCCTTGCCCAAAACCTTAAAATAACCGAACTGCGTGACATCGACCAATGGAACGTTGTCTTTGGAGGCCTTATCCTTCACTTCTTGAGGGATCAAGGACCAGATCTTGTCAACGTTGACAATCGGGCAATAGAACTTGTTGCGAAGCTTGTGGAAGTAACGCATACCGACTTTACCGAAATAACCAGGGTGATACTTATCGAAGAGAATACGATGGTGGTGCATACCTCCGGCGTTTCCCCGACCTCCAGGATGCTTTCGGTGCTTGCCGATTCTACCGTGACCGGCGCTCACATGTCCTCTCTTCTTCCTGTTCTTCTTGAATCGAGTCGTCATGGCTGA ATGGTTCAAACAGACAAAAATGAAAATTCACCAAGAACAAAAATCCCTATAACGAAGAGAAACTCAAACCTAAGCTGTAAGAACCACCGCGCCACCGGCCTCCTTAATCTTCTTCTCGGCGATCTTGGATACAAGCTTGGCCTTCACCACAATAGGCTGATTCTCCGGCAACACACCCTTGCCCAAAACCTTAAAATAACCGAACTGCGTGACATCGACCAATGGAACGTTGTCTTTGGAGGCCTTATCCTTCACTTCTTGAGGGATCAAGGACCAGATCTTGTCAACGTTGACAATCGGGCAATAGAACTTGTTGCGAAGCTTGTGGAAGTAACGCATACCGACTTTACCGAAATAACCAGGGTGATACTTATCGAAGAGAATACGATGGTGGTGCATACCTCCGGCGTTTCCCCGACCTCCAGGATGCTTTCGGTGCTTGCCGATTCTACCGTGACCGGCGCTCACATGTCCTCTCTTCTTCCTGTTCTTCTTGAATCGAGTCGTCATGGCTGA MVQTDKNENSPRTKIPITKRNSNLSCKNHRATGLLNLLLGDLGYKLGLHHNRLILRQHTLAQNLKITELRDIDQWNVVFGGLILHFLRDQGPDLVNVDNRAIELVAKLVEVTHTDFTEITRVILIEENTMVVHTSGVSPTSRMLSVLADSTVTGAHMSSLLPVLLESSRHG
BLAST of CmaCh04G017620 vs. Swiss-Prot
Match: YGK2_YEAST (Putative uncharacterized protein YGL102C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YGL102C PE=5 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 7.3e-09 Identity = 38/100 (38.00%), Postives = 59/100 (59.00%), Query Frame = 1
BLAST of CmaCh04G017620 vs. TrEMBL
Match: W9RN37_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027707 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 1.5e-40 Identity = 89/152 (58.55%), Postives = 123/152 (80.92%), Query Frame = 1
BLAST of CmaCh04G017620 vs. TrEMBL
Match: A0A0P6HHB0_9CRUS (Uncharacterized protein (Fragment) OS=Daphnia magna PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 4.2e-19 Identity = 67/156 (42.95%), Postives = 100/156 (64.10%), Query Frame = 1
BLAST of CmaCh04G017620 vs. TrEMBL
Match: A0A0P5MUJ4_9CRUS (Uncharacterized protein (Fragment) OS=Daphnia magna PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 7.8e-18 Identity = 63/147 (42.86%), Postives = 96/147 (65.31%), Query Frame = 1
BLAST of CmaCh04G017620 vs. TrEMBL
Match: A0A0P6CR56_9CRUS (Uncharacterized protein (Fragment) OS=Daphnia magna PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.0e-17 Identity = 62/147 (42.18%), Postives = 95/147 (64.63%), Query Frame = 1
BLAST of CmaCh04G017620 vs. TrEMBL
Match: A0A0P5RTB5_9CRUS (Uncharacterized protein (Fragment) OS=Daphnia magna PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.1e-16 Identity = 61/145 (42.07%), Postives = 93/145 (64.14%), Query Frame = 1
BLAST of CmaCh04G017620 vs. NCBI nr
Match: gi|703113483|ref|XP_010100397.1| (hypothetical protein L484_027707 [Morus notabilis]) HSP 1 Score: 174.1 bits (440), Expect = 2.1e-40 Identity = 89/152 (58.55%), Postives = 123/152 (80.92%), Query Frame = 1
BLAST of CmaCh04G017620 vs. NCBI nr
Match: gi|24943208|gb|AAN65372.1| (YGL102C-like protein [Kluyveromyces lactis]) HSP 1 Score: 74.3 bits (181), Expect = 2.3e-10 Identity = 51/136 (37.50%), Postives = 76/136 (55.88%), Query Frame = 1
BLAST of CmaCh04G017620 vs. NCBI nr
Match: gi|728841634|gb|KHG21077.1| (hypothetical protein F383_04494 [Gossypium arboreum]) HSP 1 Score: 73.9 bits (180), Expect = 3.0e-10 Identity = 39/69 (56.52%), Postives = 54/69 (78.26%), Query Frame = 1
BLAST of CmaCh04G017620 vs. NCBI nr
Match: gi|528256353|gb|EPY36694.1| (large subunit ribosomal protein L27Ae [Angomonas deanei]) HSP 1 Score: 66.2 bits (160), Expect = 6.2e-08 Identity = 51/153 (33.33%), Postives = 84/153 (54.90%), Query Frame = 1
BLAST of CmaCh04G017620 vs. NCBI nr
Match: gi|259146405|emb|CAY79662.1| (EC1118_1G1_1849p [Saccharomyces cerevisiae EC1118]) HSP 1 Score: 63.5 bits (153), Expect = 4.0e-07 Identity = 38/100 (38.00%), Postives = 59/100 (59.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |