CmaCh04G017440 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G017440
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionSignal recognition particle receptor subunit beta
LocationCma_Chr04 : 8760061 .. 8761937 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGGGGCGAGGAAATTTTGACTGAAAAGTTCGGTTTGATTTGAAGAATTGAACTTTTGGAGCGTGTCGACTCTAAAATTTTAGAAATGGAGGGTGCGGAACAGTGGAAGGTTCAGGTGGAGCAATTGAAAGTCCATATGGAGCATTGGCTAGAACAAGGCTTGGAGCTTGTTCACCAAATACCCCCAATTCAACTCTACGTTGGGGTTGCTGTGTTGTTATTTACCACTTTGCTTCTTTTATTGAGTGAGTCTTTCTCTTTATCTGAATGTTCCTTTCTGTAATGGTATATGGTGGAACATTTTGGAATTGAAATTTTCCCCCCCTTCTCTCCCCGCAGCTCGCTTGTTTAACCGCAGAAAATCGAACATCATTCTACTCAGTGGGCTCAGTGGAAGTGGGAAAACTGTTCTTTTTTATCAAGTAAGCATCTGCCTTGTTGGTTTAATTGCATTCTTCATATACTTCGGTTCCAATTGAGTGGTTAAGCCTTTTGTCATATGAGTTTATACACTAATTATATTTCTTCACCATCTTCTCAAGAAGTAGCCTTAAAGCCCCTAATGTTATTTTGGAATACTCTGTAGATATTCTTGGTGTTTGATGTCTTGGATACTTCAAAGCATAGCATAATGATTAATTCATGTCTGACAATGTTGTTACATACAATTTGAGACGAAGCATAATTTCTTTTGGGTGTATGATGATGCTAGATCACCTATATATATGTGCTAAAGATTAATGTATTAAGGGAAAGAAAGGGGGGAAAACCTCTTGCCTTCTAAATGTGTTGTTGTCATTTATGATGTTTTTATGCCTTTGCAGCTTCGTGATGGTTCGTCTCATCAGGGTACTGTTACATCAATGGAACCTAATGAGGGTACTTTTGTGCTTCATTCTGAAATAACGAAGGTAATTTCTGTTTCCTAGTACTGATACTCAGAAATTGAGAATGCTCCATCGCCGACCCATTTCAGCTTTGAAATCAAAACGATCATTGCCGCTTGGTTTCTGTTTCCAGCAGTCTTTAAAATAACAGACATATTTTTTTTTCTGTGTATCTTGGTAGAAGGACAAACTGAAGCCTGTTCATCTTGTTGATGTTCCTGGGCATTCTCGCCTTCGAGCCAAACTAGATGAATTTCTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGATGCTTTGGATTTTTTGCCCAACTGTCGTGCAGCTTCAGAGTAATGGATTAGTCCTCTCAACTTTTTGTTTACGTTCATGTGCATTTACTATATTAATGGAGGTGTTTTGAGTAGCCTAAGTTCTTCATGAATGTGTTACTTAAGCTTGAGTCTCCTGAGTTCTCCCAATTCTCTCGAGAAAACATTCCATATCACCATAGAAAGCACGTAATTTGTCACATTAAGCACTCACTTGCGCTGTCCATATCTGTTACTAGTTTAATCTAATTAAATATCTATGGAAGGTACCTCTATGACATCCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTTCTGATACTATGCAACAAAGCAGACAAGGTGACAGCCCACACAAAGGAGTTTATTAACAAGCAAATGGAAAAAGAGATGTATGGCATTCAACTCTCTATATTAGCAACATCTTTCTAATGATCTGCCATGAATTTGTATTGCAATTTTCAGCATTGTGTTTTTATATGTTTGTGCAGCGACAAGTTACGAGTATCAAGAAGTGCAATCTCAGATGCTGATATCTCAAATGACTTCACACTAGGAGTACCTGGAAAAGCTTTTTCGTTCACACAGTGCCATAACAAAGTAACAGTTGCTGAAGCCTCTGGTTTGAAGGGCGAAGTATCTGAGGTGGAGCAATTTATAAGGGAAAACGTGTAG

mRNA sequence

CGGGGGCGAGGAAATTTTGACTGAAAAGTTCGGTTTGATTTGAAGAATTGAACTTTTGGAGCGTGTCGACTCTAAAATTTTAGAAATGGAGGGTGCGGAACAGTGGAAGGTTCAGGTGGAGCAATTGAAAGTCCATATGGAGCATTGGCTAGAACAAGGCTTGGAGCTTGTTCACCAAATACCCCCAATTCAACTCTACGTTGGGGTTGCTGTGTTGTTATTTACCACTTTGCTTCTTTTATTGACTCGCTTGTTTAACCGCAGAAAATCGAACATCATTCTACTCAGTGGGCTCAGTGGAAGTGGGAAAACTGTTCTTTTTTATCAACTTCGTGATGGTTCGTCTCATCAGGGTACTGTTACATCAATGGAACCTAATGAGGGTACTTTTGTGCTTCATTCTGAAATAACGAAGAAGGACAAACTGAAGCCTGTTCATCTTGTTGATGTTCCTGGGCATTCTCGCCTTCGAGCCAAACTAGATGAATTTCTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGATGCTTTGGATTTTTTGCCCAACTGTCGTGCAGCTTCAGAGTACCTCTATGACATCCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTTCTGATACTATGCAACAAAGCAGACAAGGTGACAGCCCACACAAAGGAGTTTATTAACAAGCAAATGGAAAAAGAGATCGACAAGTTACGAGTATCAAGAAGTGCAATCTCAGATGCTGATATCTCAAATGACTTCACACTAGGAGTACCTGGAAAAGCTTTTTCGTTCACACAGTGCCATAACAAAGTAACAGTTGCTGAAGCCTCTGGTTTGAAGGGCGAAGTATCTGAGGTGGAGCAATTTATAAGGGAAAACGTGTAG

Coding sequence (CDS)

ATGGAGGGTGCGGAACAGTGGAAGGTTCAGGTGGAGCAATTGAAAGTCCATATGGAGCATTGGCTAGAACAAGGCTTGGAGCTTGTTCACCAAATACCCCCAATTCAACTCTACGTTGGGGTTGCTGTGTTGTTATTTACCACTTTGCTTCTTTTATTGACTCGCTTGTTTAACCGCAGAAAATCGAACATCATTCTACTCAGTGGGCTCAGTGGAAGTGGGAAAACTGTTCTTTTTTATCAACTTCGTGATGGTTCGTCTCATCAGGGTACTGTTACATCAATGGAACCTAATGAGGGTACTTTTGTGCTTCATTCTGAAATAACGAAGAAGGACAAACTGAAGCCTGTTCATCTTGTTGATGTTCCTGGGCATTCTCGCCTTCGAGCCAAACTAGATGAATTTCTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGATGCTTTGGATTTTTTGCCCAACTGTCGTGCAGCTTCAGAGTACCTCTATGACATCCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTTCTGATACTATGCAACAAAGCAGACAAGGTGACAGCCCACACAAAGGAGTTTATTAACAAGCAAATGGAAAAAGAGATCGACAAGTTACGAGTATCAAGAAGTGCAATCTCAGATGCTGATATCTCAAATGACTTCACACTAGGAGTACCTGGAAAAGCTTTTTCGTTCACACAGTGCCATAACAAAGTAACAGTTGCTGAAGCCTCTGGTTTGAAGGGCGAAGTATCTGAGGTGGAGCAATTTATAAGGGAAAACGTGTAG

Protein sequence

MEGAEQWKVQVEQLKVHMEHWLEQGLELVHQIPPIQLYVGVAVLLFTTLLLLLTRLFNRRKSNIILLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKADKVTAHTKEFINKQMEKEIDKLRVSRSAISDADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLKGEVSEVEQFIRENV
Homology
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BLAST of CmaCh04G017440 vs. Swiss-Prot
Match: SRPRB_DICDI (Signal recognition particle receptor subunit beta OS=Dictyostelium discoideum GN=srprb PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.9e-24
Identity = 70/205 (34.15%), Postives = 109/205 (53.17%), Query Frame = 1 

Query: 59  RRKSNIILLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDKLKPVH 118
           +R  NI +L GLS +GKT L   L +      T TS+  N G ++  ++       K + 
Sbjct: 83  KRGVNIAIL-GLSNAGKTALLLNLTNVDKKISTHTSITTNNGVYITENK-------KKLP 142

Query: 119 LVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPV 178
           ++DVPG+ + +A L + L  +A +++V+D   F+ N    ++YLYDILTN SV +KKIPV
Sbjct: 143 IIDVPGNGKAKASLPKILSNSACIIYVIDGTTFIDNSTQEAQYLYDILTNESVYQKKIPV 202

Query: 179 LILCNKADKVTAHTKEFINKQMEKEIDKLRVSRSA----ISDADISNDFTLGVPGKAFSF 238
           L+  NK D  +    E +   +E+E+D LR +R A    +   +   D  LG+ G  F F
Sbjct: 203 LVFNNKMDLDSTIDTEQVKNILERELDDLRRTRGATPIVLGQEEDKKDIYLGIEGTPFQF 262

Query: 239 TQCHNKVTVA--EASGLKGEVSEVE 258
               N V  +   AS   GE+ E++
Sbjct: 263 DHLPNDVQFSNGSASPSNGELKEID 279

[Close]
BLAST of CmaCh04G017440 vs. Swiss-Prot
Match: SRPRB_RAT (Signal recognition particle receptor subunit beta OS=Rattus norvegicus GN=Srprb PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.8e-22
Identity = 79/236 (33.47%), Postives = 124/236 (52.54%), Query Frame = 1 

Query: 21  WLEQGLELVHQIPPIQLYVGVAVLLFTTLLLLLTRLFNRRKSN-IILLSGLSGSGKTVLF 80
           +L+   + + Q  P  L V VAVL     L+    +++R+ S   +L  GL  SGKT+LF
Sbjct: 20  YLDSLRQELQQRDPTLLSVAVAVLAVLLTLVFWKFIWSRKSSQRAVLFVGLCDSGKTLLF 79

Query: 81  YQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDKLKPVHLVDVPGHSRLRAK-LDEFLPQ 140
            +L  G  ++ T TS+  +   + +++     ++   + L+D+PGH  LR + LD F   
Sbjct: 80  VRLLTGQ-YRDTQTSITDSSAIYKVNN-----NRGNSLTLIDLPGHESLRLQFLDRFKSS 139

Query: 141 AAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKADKVTAHTKEFINK 200
           A  VVFVVD+  F    +  +E+LY +L ++  +K     L+ CNK D   A + + I +
Sbjct: 140 ARAVVFVVDSATFQREVKDVAEFLYQVLIDSMALKNTPAFLVACNKQDIAMAKSAKLIQQ 199

Query: 201 QMEKEIDKLRVSRSAIS---DADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLKG 252
           Q+EKE++ LRV+RSA     D+  +    LG  GK F F+Q   KV   E S   G
Sbjct: 200 QLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGG 249

[Close]
BLAST of CmaCh04G017440 vs. Swiss-Prot
Match: SRPRB_MOUSE (Signal recognition particle receptor subunit beta OS=Mus musculus GN=Srprb PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.3e-22
Identity = 79/236 (33.47%), Postives = 125/236 (52.97%), Query Frame = 1 

Query: 21  WLEQGLELVHQIPPIQLYVGVAVLLFTTLLLLLTRLFNRRKSN-IILLSGLSGSGKTVLF 80
           +L+   + + Q  P  L V VA+L     L+    +++R+ S   +L  GL  SGKT+LF
Sbjct: 20  YLDSLRQELQQRDPTLLSVAVALLAVLLTLVFWKFIWSRKSSQRAVLFVGLCDSGKTLLF 79

Query: 81  YQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDKLKPVHLVDVPGHSRLRAKL-DEFLPQ 140
            +L  G  ++ T TS+  +   + +++     ++   + L+D+PGH  LR +L D F   
Sbjct: 80  VRLLTGQ-YRDTQTSITDSSAIYKVNN-----NRGNSLTLIDLPGHESLRFQLLDRFKSS 139

Query: 141 AAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKADKVTAHTKEFINK 200
           A  VVFVVD+  F    +  +E+LY +L ++  +K    +LI CNK D   A + + I +
Sbjct: 140 ARAVVFVVDSAAFQREVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAMAKSAKLIQQ 199

Query: 201 QMEKEIDKLRVSRSAIS---DADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLKG 252
           Q+EKE++ LRV+RSA     D+  +    LG  GK F F+Q   KV   E S   G
Sbjct: 200 QLEKELNTLRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGG 249

[Close]
BLAST of CmaCh04G017440 vs. Swiss-Prot
Match: SRPRB_HUMAN (Signal recognition particle receptor subunit beta OS=Homo sapiens GN=SRPRB PE=1 SV=3)

HSP 1 Score: 104.0 bits (258), Expect = 2.6e-21
Identity = 81/236 (34.32%), Postives = 125/236 (52.97%), Query Frame = 1 

Query: 29  VHQIPPIQLYVGVAVLLFTTLLLLLTRLFNRRKSN-IILLSGLSGSGKTVLFYQLRDGSS 88
           + Q  P  L V VAVL     L+    + +RR S   +LL GL  SGKT+LF +L  G  
Sbjct: 30  LQQTDPTLLSVVVAVLAVLLTLVFWKLIRSRRSSQRAVLLVGLCDSGKTLLFVRLLTGL- 89

Query: 89  HQGTVTSMEPNEGTFVLHSEITKKDKLKPVHLVDVPGHSRLRAK-LDEFLPQAAGVVFVV 148
           ++ T TS+  +   + +++     ++   + L+D+PGH  LR + L+ F   A  +VFVV
Sbjct: 90  YRDTQTSITDSCAVYRVNN-----NRGNSLTLIDLPGHESLRLQFLERFKSSARAIVFVV 149

Query: 149 DALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKADKVTAHTKEFINKQMEKEIDK 208
           D+  F    +  +E+LY +L ++  +K     LI CNK D   A + + I +Q+EKE++ 
Sbjct: 150 DSAAFQREVKDVAEFLYQVLIDSMGLKNTPSFLIACNKQDIAMAKSAKLIQQQLEKELNT 209

Query: 209 LRVSRSAIS---DADISNDFTLGVPGKAFSFTQCHNKVTVAE--ASGLKGEVSEVE 258
           LRV+RSA     D+  +    LG  GK F F+Q   KV   E  A G +G+V   +
Sbjct: 210 LRVTRSAAPSTLDSSSTAPAQLGKKGKEFEFSQLPLKVEFLECSAKGGRGDVGSAD 259

[Close]
BLAST of CmaCh04G017440 vs. Swiss-Prot
Match: SRPB_YEAST (Signal recognition particle receptor subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SRP102 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-10
Identity = 63/214 (29.44%), Postives = 91/214 (42.52%), Query Frame = 1 

Query: 65  ILLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDKLKPVHLVDVPG 124
           I+++G   SGKT L   L   S    TV S EP        S +T         LVD PG
Sbjct: 41  IIIAGPQNSGKTSLLTLLTTDSVRP-TVVSQEPLSAADYDGSGVT---------LVDFPG 100

Query: 125 HSRLRAKLDEFLPQAA----GVVFVVDALDFLPNCRAASEYLYDILT-NASVVKKKIPVL 184
           H +LR KL ++L   A    G++F+VD+          +E+L DIL+   S  +  I +L
Sbjct: 101 HVKLRYKLSDYLKTRAKFVKGLIFMVDSTVDPKKLTTTAEFLVDILSITESSCENGIDIL 160

Query: 185 ILCNKADKVTAHTKEFINKQMEKEIDKL---------RVSRSAISDADISNDFTLGVPGK 244
           I CNK++  TA     I   +E EI K+          V R    +    N   +     
Sbjct: 161 IACNKSELFTARPPSKIKDALESEIQKVIERRKKSLNEVERKINEEDYAENTLDVLQSTD 220

Query: 245 AFSFTQCHNKVTVAEASGLKGEVSEVEQFIRENV 265
            F F      V   E S  K ++S+  ++I E +
Sbjct: 221 GFKFANLEASVVAFEGSINKRKISQWREWIDEKL 244

[Close]
BLAST of CmaCh04G017440 vs. TrEMBL
Match: A0A0A0KSA6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G600910 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 2.5e-132
Identity = 245/264 (92.80%), Postives = 251/264 (95.08%), Query Frame = 1 

Query: 1   MEGAEQWKVQVEQLKVHMEHWLEQGLELVHQIPPIQLYVGVAVLLFTTLLLLLTRLFNRR 60
           MEG EQWKVQVEQLKV ME WLEQGLE VHQIPPIQLYVGV VLLFTTLLLL TRLF RR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60

Query: 61  KSNIILLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDKLKPVHLV 120
           KSN I+LSGLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI KKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKADKVTAHTKEFINKQMEKEIDKLRVSRSAISDADISNDFTLGVPGKAFSFTQCHNK 240
           LCNK DKVTAHTKEFIN+QMEKEIDKLRVSRSAIS ADI+NDFTLG+PGKAFSFTQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGIPGKAFSFTQCHNK 240

Query: 241 VTVAEASGLKGEVSEVEQFIRENV 265
           V VAEASGL GEVSEVEQFIRENV
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENV 264

[Close]
BLAST of CmaCh04G017440 vs. TrEMBL
Match: E5GBI2_CUCME (Signal recognition particle receptor subunit beta OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 4.3e-132
Identity = 245/264 (92.80%), Postives = 252/264 (95.45%), Query Frame = 1 

Query: 1   MEGAEQWKVQVEQLKVHMEHWLEQGLELVHQIPPIQLYVGVAVLLFTTLLLLLTRLFNRR 60
           MEG EQWKVQVEQLKV ME WLE+GLE VHQIPPIQLYVGV VLLFTTLLLLLTRLF RR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLERGLEFVHQIPPIQLYVGVGVLLFTTLLLLLTRLFKRR 60

Query: 61  KSNIILLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDKLKPVHLV 120
           KSN I+LSGLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI KKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKADKVTAHTKEFINKQMEKEIDKLRVSRSAISDADISNDFTLGVPGKAFSFTQCHNK 240
           LCNK DKVTAHTKEFIN+QMEKEIDKLRVSRSAIS ADISNDFTLG+PGKAFSFTQC+NK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISTADISNDFTLGIPGKAFSFTQCYNK 240

Query: 241 VTVAEASGLKGEVSEVEQFIRENV 265
           V VAEASGL GEVSEVEQFIRENV
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENV 264

[Close]
BLAST of CmaCh04G017440 vs. TrEMBL
Match: V4TNX3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032463mg PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 7.1e-111
Identity = 204/263 (77.57%), Postives = 232/263 (88.21%), Query Frame = 1 

Query: 2   EGAEQWKVQVEQLKVHMEHWLEQGLELVHQIPPIQLYVGVAVLLFTTLLLLLTRLFNRRK 61
           EG EQWK  +E+       WL +G+E ++QIPP QLY+  AVLL TT LLLL ++F R+K
Sbjct: 6   EGMEQWKKDLEE-------WLNRGIEFINQIPPTQLYIACAVLLLTTALLLLLQVFRRKK 65

Query: 62  SNIILLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDKLKPVHLVD 121
           SN I+L+GLSGSGKTVLFYQLRDGS+HQGTVTSMEPNE TFVLHSE TKK K+KPVHLVD
Sbjct: 66  SNTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHLVD 125

Query: 122 VPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLIL 181
           VPGHSRLR KLDEFLPQAAG+VFVVDAL+FLPNC AASEYLYDILTN++VVKKKIPVLI 
Sbjct: 126 VPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVLIC 185

Query: 182 CNKADKVTAHTKEFINKQMEKEIDKLRVSRSAISDADISNDFTLGVPGKAFSFTQCHNKV 241
           CNK DKVTAHTKEFI KQMEKEIDKLR SRSA+S+AD++NDFTLG+PG+AFSF+QCHNKV
Sbjct: 186 CNKTDKVTAHTKEFIRKQMEKEIDKLRASRSAVSEADVTNDFTLGIPGQAFSFSQCHNKV 245

Query: 242 TVAEASGLKGEVSEVEQFIRENV 265
           +VAEASGL GE+S+VEQFIRE V
Sbjct: 246 SVAEASGLTGEISQVEQFIREQV 261

[Close]
BLAST of CmaCh04G017440 vs. TrEMBL
Match: A0A061GDY8_THECC (Signal recognition particle receptor subunit beta isoform 1 OS=Theobroma cacao GN=TCM_016611 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 4.6e-110
Identity = 213/271 (78.60%), Postives = 232/271 (85.61%), Query Frame = 1 

Query: 1   MEGAEQWKVQVEQLKVHME-------HWLEQGLELVHQIPPIQLYVGVAVLLFTTLLLLL 60
           MEG EQWK Q+EQLK  +E        WL Q +E ++QIPPIQLY  VAVLL +TLLLL 
Sbjct: 1   MEGMEQWKDQLEQLKSQLEPWKNQLEQWLHQAIEFLNQIPPIQLYAAVAVLLVSTLLLLS 60

Query: 61  TRLFNRRKSNIILLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDK 120
             LF R KSN I+L+GLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVL+SE  KK K
Sbjct: 61  FHLFKRTKSNSIVLTGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLNSESYKKGK 120

Query: 121 LKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVK 180
            KPVHLVDVPGHSRL+ KLDEFLPQAAG+VFVVDAL+FLPNCR ASEYLYDILT ASVVK
Sbjct: 121 TKPVHLVDVPGHSRLQPKLDEFLPQAAGIVFVVDALEFLPNCRLASEYLYDILTKASVVK 180

Query: 181 KKIPVLILCNKADKVTAHTKEFINKQMEKEIDKLRVSRSAISDADISNDFTLGVPGKAFS 240
           KKIPVLI CNK DKVTAHTKEFI KQMEKEIDKLR SRSAIS ADI+NDFTLG PG+AF+
Sbjct: 181 KKIPVLICCNKTDKVTAHTKEFIRKQMEKEIDKLRASRSAISAADIANDFTLGEPGEAFA 240

Query: 241 FTQCHNKVTVAEASGLKGEVSEVEQFIRENV 265
           F+QC NKVTVAEASGL GEV++VEQFIRE+V
Sbjct: 241 FSQCRNKVTVAEASGLTGEVAQVEQFIREHV 271

[Close]
BLAST of CmaCh04G017440 vs. TrEMBL
Match: M5WV40_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009762mg PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.0e-109
Identity = 207/277 (74.73%), Postives = 232/277 (83.75%), Query Frame = 1 

Query: 1   MEGAEQWKVQVEQLK-------------VHMEHWLEQGLELVHQIPPIQLYVGVAVLLFT 60
           MEG EQWKV  EQ K             +  E W  Q LE +HQ+PP Q+Y  +A+L+FT
Sbjct: 1   MEGLEQWKVLAEQWKKQAEKWSSQALEHIQAEKWSSQALEYIHQVPPEQIYAAIAILIFT 60

Query: 61  TLLLLLTRLFNRRKSNIILLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE 120
           + LL+L RLF R K+N ILLSGLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSE
Sbjct: 61  SFLLILVRLFKRPKANTILLSGLSGSGKTLLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE 120

Query: 121 ITKKDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILT 180
            +K  K+ PVHLVDVPGHSRLRAKLD+FLPQAAG+VFVVDAL+FLPNCRAASEYLYDILT
Sbjct: 121 KSKNGKVNPVHLVDVPGHSRLRAKLDDFLPQAAGIVFVVDALEFLPNCRAASEYLYDILT 180

Query: 181 NASVVKKKIPVLILCNKADKVTAHTKEFINKQMEKEIDKLRVSRSAISDADISNDFTLGV 240
            ASVV+KKIPVLILCNK DKVTAH+KEFI KQ+EKEIDKLR SRSAIS ADI+NDFTLGV
Sbjct: 181 KASVVRKKIPVLILCNKTDKVTAHSKEFIRKQLEKEIDKLRASRSAISAADIANDFTLGV 240

Query: 241 PGKAFSFTQCHNKVTVAEASGLKGEVSEVEQFIRENV 265
           PG+ FSF QC NKVTVAEASGL G+VS+VEQFIR++V
Sbjct: 241 PGEPFSFHQCQNKVTVAEASGLTGDVSQVEQFIRDHV 277

[Close]
BLAST of CmaCh04G017440 vs. TAIR10
Match: AT5G05670.2 (AT5G05670.2 signal recognition particle binding)

HSP 1 Score: 381.3 bits (978), Expect = 4.7e-106
Identity = 192/255 (75.29%), Postives = 219/255 (85.88%), Query Frame = 1 

Query: 11  VEQLKVHMEHWLEQGLELVHQIPPIQLYVGVAVLLFTTLLLLLT-RLFNRRKSNIILLSG 70
           +E LK+  E W  QG+E + +IPP QLY  + VLLFTT+LL L+ RL  R KSN +LLSG
Sbjct: 4   LEDLKILAEQWSHQGIEYLQKIPPNQLYAAIGVLLFTTILLFLSIRLVRRTKSNTVLLSG 63

Query: 71  LSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDKLKPVHLVDVPGHSRLR 130
           L+GSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE TKK K+KPVHLVDVPGHSRLR
Sbjct: 64  LTGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSENTKKGKIKPVHLVDVPGHSRLR 123

Query: 131 AKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKADKVT 190
            KL+EFLPQAA +VFVVDAL+FLPNCRAASEYLY+ILTNA+VVKKKIPVL+ CNK DK+T
Sbjct: 124 PKLEEFLPQAAAIVFVVDALEFLPNCRAASEYLYEILTNANVVKKKIPVLLCCNKTDKLT 183

Query: 191 AHTKEFINKQMEKEIDKLRVSRSAISDADISNDFTLGVPGKAFSFTQCHNKVTVAEASGL 250
           AHTKEFI KQMEKEI+KLR SRSA+S ADI+NDFT+G+ G+ FSFT C NKVTVAEASGL
Sbjct: 184 AHTKEFIRKQMEKEIEKLRASRSAVSTADIANDFTIGIEGEVFSFTHCSNKVTVAEASGL 243

Query: 251 KGEVSEVEQFIRENV 265
            GE  ++E FIRE +
Sbjct: 244 TGETIQIEDFIREYI 258

[Close]
BLAST of CmaCh04G017440 vs. TAIR10
Match: AT2G18770.1 (AT2G18770.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 375.6 bits (963), Expect = 2.6e-104
Identity = 192/255 (75.29%), Postives = 217/255 (85.10%), Query Frame = 1 

Query: 11  VEQLKVHMEHWLEQGLELVHQIPPIQLYVGVAVLLFTTLLLLLTRLFNRRKSNIILLSGL 70
           +E LK+  E W +QGLE V +IPP QLY  + VLL  T+ LL  RLF R KSN +LLSGL
Sbjct: 4   LEDLKIVAEQWSKQGLEFVQKIPPPQLYTAIGVLLLATIWLLSIRLFRRTKSNTVLLSGL 63

Query: 71  SGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI-TKKDKLKPVHLVDVPGHSRLR 130
           SGSGKTVLFYQLRDGSSHQG VTSMEPNEGTFVLH+E  TKK K+KPVHL+DVPGHSRL 
Sbjct: 64  SGSGKTVLFYQLRDGSSHQGAVTSMEPNEGTFVLHNENNTKKGKVKPVHLIDVPGHSRLI 123

Query: 131 AKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKADKVT 190
           +KL+E+LP+AA VVFVVDAL+FLPN RAASEYLYDILTNASV+K K PVL+ CNK DKVT
Sbjct: 124 SKLEEYLPRAAAVVFVVDALEFLPNIRAASEYLYDILTNASVIKNKTPVLLCCNKTDKVT 183

Query: 191 AHTKEFINKQMEKEIDKLRVSRSAISDADISNDFTLGVPGKAFSFTQCHNKVTVAEASGL 250
           AHTKEFI KQMEKEIDKLRVSRSAIS ADI+NDFTLG+ G+ FSF+ CHNKVTVAEASGL
Sbjct: 184 AHTKEFIRKQMEKEIDKLRVSRSAISTADIANDFTLGIEGEVFSFSHCHNKVTVAEASGL 243

Query: 251 KGEVSEVEQFIRENV 265
            GE  +V++FIRE+V
Sbjct: 244 TGETDQVQEFIREHV 258

[Close]
BLAST of CmaCh04G017440 vs. TAIR10
Match: AT3G49860.1 (AT3G49860.1 ADP-ribosylation factor-like A1B)

HSP 1 Score: 53.1 bits (126), Expect = 2.9e-07
Identity = 41/134 (30.60%), Postives = 69/134 (51.49%), Query Frame = 1 

Query: 67  LSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDKLKPVHLVDVPGHS 126
           L GL  SGKT L   +  G   +  + ++  N        ++TK++    + L D+ G  
Sbjct: 16  LVGLQNSGKTSLVNVVATGEYSEDMIPTVGFNM------RKVTKENVA--IRLWDLGGQP 75

Query: 127 RLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKAD 186
           R R   + +    + +V+VVDA D   N   +   L+D+L+NAS++   IP+L+L NK D
Sbjct: 76  RFRCMWERYCRAVSMIVYVVDAAD-TENLSVSRSELHDLLSNASLIG--IPLLVLGNKID 135

Query: 187 KVTAHTKEFINKQM 201
              A +KE + ++M
Sbjct: 136 IHGALSKEALTEEM 138

[Close]
BLAST of CmaCh04G017440 vs. TAIR10
Match: AT5G67560.1 (AT5G67560.1 ADP-ribosylation factor-like A1D)

HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06
Identity = 45/156 (28.85%), Postives = 77/156 (49.36%), Query Frame = 1 

Query: 45  LFTTLLLLLTRLFNRRKSNIILLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVL 104
           L+  LL  L  LF +++  + L+ GL  +GKT L   +  G   +  + ++  N      
Sbjct: 3   LWDALLNWLRSLFFKQEMELSLI-GLQNAGKTSLVNVVATGGYSEDMIPTVGFNM----- 62

Query: 105 HSEITKKDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYD 164
             ++TK      + L D+ G  R R+  + +    + +V+VVDA D   N   +   L+D
Sbjct: 63  -RKVTKGSVT--IKLWDLGGQPRFRSMWERYCRSVSAIVYVVDAAD-PDNLSVSKSELHD 122

Query: 165 ILTNASVVKKKIPVLILCNKADKVTAHTKEFINKQM 201
           +L+  S+    IP+L+L NK DK  A +KE +  +M
Sbjct: 123 LLSKTSL--NGIPLLVLGNKIDKPGALSKEALTDEM 146

[Close]
BLAST of CmaCh04G017440 vs. TAIR10
Match: AT3G49870.1 (AT3G49870.1 ADP-ribosylation factor-like A1C)

HSP 1 Score: 48.1 bits (113), Expect = 9.5e-06
Identity = 44/156 (28.21%), Postives = 76/156 (48.72%), Query Frame = 1 

Query: 45  LFTTLLLLLTRLFNRRKSNIILLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVL 104
           L    L  L  LF +++  + L+ GL  +GKT L   +  G   +  + ++  N      
Sbjct: 3   LLEAFLNWLRSLFFKQEMELSLI-GLQNAGKTSLVNVVATGGYSEDMIPTVGFNM----- 62

Query: 105 HSEITKKDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYD 164
             ++TK +    + L D+ G  R R+  + +    + +V+VVDA D   N   +   L+D
Sbjct: 63  -RKVTKGNVT--IKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAAD-PDNLSVSKSELHD 122

Query: 165 ILTNASVVKKKIPVLILCNKADKVTAHTKEFINKQM 201
           +L+  S+    IP+L+L NK DK  A +KE +  +M
Sbjct: 123 LLSKTSL--NGIPLLVLGNKIDKPGALSKEALTDEM 146

[Close]
BLAST of CmaCh04G017440 vs. NCBI nr
Match: gi|449434947|ref|XP_004135257.1| (PREDICTED: signal recognition particle receptor subunit beta-like [Cucumis sativus])

HSP 1 Score: 479.6 bits (1233), Expect = 3.6e-132
Identity = 245/264 (92.80%), Postives = 251/264 (95.08%), Query Frame = 1 

Query: 1   MEGAEQWKVQVEQLKVHMEHWLEQGLELVHQIPPIQLYVGVAVLLFTTLLLLLTRLFNRR 60
           MEG EQWKVQVEQLKV ME WLEQGLE VHQIPPIQLYVGV VLLFTTLLLL TRLF RR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRR 60

Query: 61  KSNIILLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDKLKPVHLV 120
           KSN I+LSGLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI KKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKADKVTAHTKEFINKQMEKEIDKLRVSRSAISDADISNDFTLGVPGKAFSFTQCHNK 240
           LCNK DKVTAHTKEFIN+QMEKEIDKLRVSRSAIS ADI+NDFTLG+PGKAFSFTQCHNK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGIPGKAFSFTQCHNK 240

Query: 241 VTVAEASGLKGEVSEVEQFIRENV 265
           V VAEASGL GEVSEVEQFIRENV
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENV 264

[Close]
BLAST of CmaCh04G017440 vs. NCBI nr
Match: gi|659090765|ref|XP_008446189.1| (PREDICTED: signal recognition particle receptor subunit beta-like [Cucumis melo])

HSP 1 Score: 478.8 bits (1231), Expect = 6.2e-132
Identity = 245/264 (92.80%), Postives = 252/264 (95.45%), Query Frame = 1 

Query: 1   MEGAEQWKVQVEQLKVHMEHWLEQGLELVHQIPPIQLYVGVAVLLFTTLLLLLTRLFNRR 60
           MEG EQWKVQVEQLKV ME WLE+GLE VHQIPPIQLYVGV VLLFTTLLLLLTRLF RR
Sbjct: 1   MEGTEQWKVQVEQLKVQMEQWLERGLEFVHQIPPIQLYVGVGVLLFTTLLLLLTRLFKRR 60

Query: 61  KSNIILLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDKLKPVHLV 120
           KSN I+LSGLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSEI KKDKLKPVHLV
Sbjct: 61  KSNTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLV 120

Query: 121 DVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180
           DVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI
Sbjct: 121 DVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLI 180

Query: 181 LCNKADKVTAHTKEFINKQMEKEIDKLRVSRSAISDADISNDFTLGVPGKAFSFTQCHNK 240
           LCNK DKVTAHTKEFIN+QMEKEIDKLRVSRSAIS ADISNDFTLG+PGKAFSFTQC+NK
Sbjct: 181 LCNKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISTADISNDFTLGIPGKAFSFTQCYNK 240

Query: 241 VTVAEASGLKGEVSEVEQFIRENV 265
           V VAEASGL GEVSEVEQFIRENV
Sbjct: 241 VAVAEASGLTGEVSEVEQFIRENV 264

[Close]
BLAST of CmaCh04G017440 vs. NCBI nr
Match: gi|567891611|ref|XP_006438326.1| (hypothetical protein CICLE_v10032463mg [Citrus clementina])

HSP 1 Score: 408.3 bits (1048), Expect = 1.0e-110
Identity = 204/263 (77.57%), Postives = 232/263 (88.21%), Query Frame = 1 

Query: 2   EGAEQWKVQVEQLKVHMEHWLEQGLELVHQIPPIQLYVGVAVLLFTTLLLLLTRLFNRRK 61
           EG EQWK  +E+       WL +G+E ++QIPP QLY+  AVLL TT LLLL ++F R+K
Sbjct: 6   EGMEQWKKDLEE-------WLNRGIEFINQIPPTQLYIACAVLLLTTALLLLLQVFRRKK 65

Query: 62  SNIILLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDKLKPVHLVD 121
           SN I+L+GLSGSGKTVLFYQLRDGS+HQGTVTSMEPNE TFVLHSE TKK K+KPVHLVD
Sbjct: 66  SNTIVLAGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEDTFVLHSESTKKGKIKPVHLVD 125

Query: 122 VPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLIL 181
           VPGHSRLR KLDEFLPQAAG+VFVVDAL+FLPNC AASEYLYDILTN++VVKKKIPVLI 
Sbjct: 126 VPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCSAASEYLYDILTNSTVVKKKIPVLIC 185

Query: 182 CNKADKVTAHTKEFINKQMEKEIDKLRVSRSAISDADISNDFTLGVPGKAFSFTQCHNKV 241
           CNK DKVTAHTKEFI KQMEKEIDKLR SRSA+S+AD++NDFTLG+PG+AFSF+QCHNKV
Sbjct: 186 CNKTDKVTAHTKEFIRKQMEKEIDKLRASRSAVSEADVTNDFTLGIPGQAFSFSQCHNKV 245

Query: 242 TVAEASGLKGEVSEVEQFIRENV 265
           +VAEASGL GE+S+VEQFIRE V
Sbjct: 246 SVAEASGLTGEISQVEQFIREQV 261

[Close]
BLAST of CmaCh04G017440 vs. NCBI nr
Match: gi|590679972|ref|XP_007040732.1| (Signal recognition particle receptor subunit beta isoform 1 [Theobroma cacao])

HSP 1 Score: 405.6 bits (1041), Expect = 6.6e-110
Identity = 213/271 (78.60%), Postives = 232/271 (85.61%), Query Frame = 1 

Query: 1   MEGAEQWKVQVEQLKVHME-------HWLEQGLELVHQIPPIQLYVGVAVLLFTTLLLLL 60
           MEG EQWK Q+EQLK  +E        WL Q +E ++QIPPIQLY  VAVLL +TLLLL 
Sbjct: 1   MEGMEQWKDQLEQLKSQLEPWKNQLEQWLHQAIEFLNQIPPIQLYAAVAVLLVSTLLLLS 60

Query: 61  TRLFNRRKSNIILLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKDK 120
             LF R KSN I+L+GLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVL+SE  KK K
Sbjct: 61  FHLFKRTKSNSIVLTGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLNSESYKKGK 120

Query: 121 LKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVK 180
            KPVHLVDVPGHSRL+ KLDEFLPQAAG+VFVVDAL+FLPNCR ASEYLYDILT ASVVK
Sbjct: 121 TKPVHLVDVPGHSRLQPKLDEFLPQAAGIVFVVDALEFLPNCRLASEYLYDILTKASVVK 180

Query: 181 KKIPVLILCNKADKVTAHTKEFINKQMEKEIDKLRVSRSAISDADISNDFTLGVPGKAFS 240
           KKIPVLI CNK DKVTAHTKEFI KQMEKEIDKLR SRSAIS ADI+NDFTLG PG+AF+
Sbjct: 181 KKIPVLICCNKTDKVTAHTKEFIRKQMEKEIDKLRASRSAISAADIANDFTLGEPGEAFA 240

Query: 241 FTQCHNKVTVAEASGLKGEVSEVEQFIRENV 265
           F+QC NKVTVAEASGL GEV++VEQFIRE+V
Sbjct: 241 FSQCRNKVTVAEASGLTGEVAQVEQFIREHV 271

[Close]
BLAST of CmaCh04G017440 vs. NCBI nr
Match: gi|595848076|ref|XP_007209456.1| (hypothetical protein PRUPE_ppa009762mg [Prunus persica])

HSP 1 Score: 404.4 bits (1038), Expect = 1.5e-109
Identity = 207/277 (74.73%), Postives = 232/277 (83.75%), Query Frame = 1 

Query: 1   MEGAEQWKVQVEQLK-------------VHMEHWLEQGLELVHQIPPIQLYVGVAVLLFT 60
           MEG EQWKV  EQ K             +  E W  Q LE +HQ+PP Q+Y  +A+L+FT
Sbjct: 1   MEGLEQWKVLAEQWKKQAEKWSSQALEHIQAEKWSSQALEYIHQVPPEQIYAAIAILIFT 60

Query: 61  TLLLLLTRLFNRRKSNIILLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE 120
           + LL+L RLF R K+N ILLSGLSGSGKT+LFYQLRDGSSHQGTVTSMEPNEGTFVLHSE
Sbjct: 61  SFLLILVRLFKRPKANTILLSGLSGSGKTLLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE 120

Query: 121 ITKKDKLKPVHLVDVPGHSRLRAKLDEFLPQAAGVVFVVDALDFLPNCRAASEYLYDILT 180
            +K  K+ PVHLVDVPGHSRLRAKLD+FLPQAAG+VFVVDAL+FLPNCRAASEYLYDILT
Sbjct: 121 KSKNGKVNPVHLVDVPGHSRLRAKLDDFLPQAAGIVFVVDALEFLPNCRAASEYLYDILT 180

Query: 181 NASVVKKKIPVLILCNKADKVTAHTKEFINKQMEKEIDKLRVSRSAISDADISNDFTLGV 240
            ASVV+KKIPVLILCNK DKVTAH+KEFI KQ+EKEIDKLR SRSAIS ADI+NDFTLGV
Sbjct: 181 KASVVRKKIPVLILCNKTDKVTAHSKEFIRKQLEKEIDKLRASRSAISAADIANDFTLGV 240

Query: 241 PGKAFSFTQCHNKVTVAEASGLKGEVSEVEQFIRENV 265
           PG+ FSF QC NKVTVAEASGL G+VS+VEQFIR++V
Sbjct: 241 PGEPFSFHQCQNKVTVAEASGLTGDVSQVEQFIRDHV 277

The following BLAST results are available for this feature:
BLAST of CmaCh04G017440 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SRPRB_DICDI1.9e-2434.15Signal recognition particle receptor subunit beta OS=Dictyostelium discoideum GN... [more]
SRPRB_RAT1.8e-2233.47Signal recognition particle receptor subunit beta OS=Rattus norvegicus GN=Srprb ... [more]
SRPRB_MOUSE2.3e-2233.47Signal recognition particle receptor subunit beta OS=Mus musculus GN=Srprb PE=1 ... [more]
SRPRB_HUMAN2.6e-2134.32Signal recognition particle receptor subunit beta OS=Homo sapiens GN=SRPRB PE=1 ... [more]
SRPB_YEAST1.6e-1029.44Signal recognition particle receptor subunit beta OS=Saccharomyces cerevisiae (s... [more]
BLAST of CmaCh04G017440 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSA6_CUCSA2.5e-13292.80Uncharacterized protein OS=Cucumis sativus GN=Csa_5G600910 PE=4 SV=1[more]
E5GBI2_CUCME4.3e-13292.80Signal recognition particle receptor subunit beta OS=Cucumis melo subsp. melo PE... [more]
V4TNX3_9ROSI7.1e-11177.57Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032463mg PE=4 SV=1[more]
A0A061GDY8_THECC4.6e-11078.60Signal recognition particle receptor subunit beta isoform 1 OS=Theobroma cacao G... [more]
M5WV40_PRUPE1.0e-10974.73Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009762mg PE=4 SV=1[more]
BLAST of CmaCh04G017440 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G05670.24.7e-10675.29 signal recognition particle binding[more]
AT2G18770.12.6e-10475.29 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
AT3G49860.12.9e-0730.60 ADP-ribosylation factor-like A1B[more]
AT5G67560.12.5e-0628.85 ADP-ribosylation factor-like A1D[more]
AT3G49870.19.5e-0628.21 ADP-ribosylation factor-like A1C[more]
BLAST of CmaCh04G017440 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449434947|ref|XP_004135257.1|3.6e-13292.80PREDICTED: signal recognition particle receptor subunit beta-like [Cucumis sativ... [more]
gi|659090765|ref|XP_008446189.1|6.2e-13292.80PREDICTED: signal recognition particle receptor subunit beta-like [Cucumis melo][more]
gi|567891611|ref|XP_006438326.1|1.0e-11077.57hypothetical protein CICLE_v10032463mg [Citrus clementina][more]
gi|590679972|ref|XP_007040732.1|6.6e-11078.60Signal recognition particle receptor subunit beta isoform 1 [Theobroma cacao][more]
gi|595848076|ref|XP_007209456.1|1.5e-10974.73hypothetical protein PRUPE_ppa009762mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019009SRP_receptor_beta_su
IPR024156Small_GTPase_ARF
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0005525 GTP binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G017440.1CmaCh04G017440.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019009Signal recognition particle receptor, beta subunitPFAMPF09439SRPRBcoord: 61..241
score: 4.5
IPR024156Small GTPase superfamily, ARF typePROFILEPS51417ARFcoord: 55..264
score: 9
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 53..262
score: 3.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 65..256
score: 5.63
NoneNo IPR availablePANTHERPTHR11485TRANSFERRINcoord: 21..264
score: 1.1E
NoneNo IPR availablePANTHERPTHR11485:SF32SUBFAMILY NOT NAMEDcoord: 21..264
score: 1.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G017440Cucsa.286220Cucumber (Gy14) v1cgycmaB0802
CmaCh04G017440Cla010071Watermelon (97103) v1cmawmB700
CmaCh04G017440Csa5G600910Cucumber (Chinese Long) v2cmacuB749
CmaCh04G017440MELO3C011981Melon (DHL92) v3.5.1cmameB641
CmaCh04G017440ClCG05G025490Watermelon (Charleston Gray)cmawcgB656
CmaCh04G017440CSPI05G22530Wild cucumber (PI 183967)cmacpiB758
CmaCh04G017440CmoCh04G018310Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G017440CmoCh18G007910Cucurbita moschata (Rifu)cmacmoB710
CmaCh04G017440Lsi04G005630Bottle gourd (USVL1VR-Ls)cmalsiB670
CmaCh04G017440Cp4.1LG09g05230Cucurbita pepo (Zucchini)cmacpeB694
CmaCh04G017440Cp4.1LG01g15600Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G017440MELO3C011981.2Melon (DHL92) v3.6.1cmamedB727
CmaCh04G017440CsaV3_5G031410Cucumber (Chinese Long) v3cmacucB0886
CmaCh04G017440Cla97C05G107660Watermelon (97103) v2cmawmbB759
CmaCh04G017440Bhi07G001398Wax gourdcmawgoB0891
CmaCh04G017440CsGy5G022040Cucumber (Gy14) v2cgybcmaB675
CmaCh04G017440Carg14479Silver-seed gourdcarcmaB1013
CmaCh04G017440Carg14328Silver-seed gourdcarcmaB0339
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G017440CmaCh18G007890Cucurbita maxima (Rimu)cmacmaB404
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G017440Melon (DHL92) v3.6.1cmamedB764
CmaCh04G017440Silver-seed gourdcarcmaB0706
CmaCh04G017440Cucumber (Chinese Long) v3cmacucB0823
CmaCh04G017440Watermelon (97103) v2cmawmbB789
CmaCh04G017440Wax gourdcmawgoB0863
CmaCh04G017440Cucurbita maxima (Rimu)cmacmaB189
CmaCh04G017440Cucurbita maxima (Rimu)cmacmaB540
CmaCh04G017440Cucumber (Gy14) v1cgycmaB1093
CmaCh04G017440Cucurbita moschata (Rifu)cmacmoB680
CmaCh04G017440Cucurbita moschata (Rifu)cmacmoB747
CmaCh04G017440Wild cucumber (PI 183967)cmacpiB700
CmaCh04G017440Cucumber (Chinese Long) v2cmacuB692
CmaCh04G017440Melon (DHL92) v3.5.1cmameB681
CmaCh04G017440Watermelon (Charleston Gray)cmawcgB681
CmaCh04G017440Watermelon (97103) v1cmawmB649
CmaCh04G017440Cucurbita pepo (Zucchini)cmacpeB704
CmaCh04G017440Cucurbita pepo (Zucchini)cmacpeB756
CmaCh04G017440Bottle gourd (USVL1VR-Ls)cmalsiB704
CmaCh04G017440Cucumber (Gy14) v2cgybcmaB244