CmaCh04G016060 (gene) Cucurbita maxima (Rimu)

NameCmaCh04G016060
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr04 : 8110342 .. 8112400 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGGTTCATTCCTTCTTTTTTTTTTTTTTTTTCTAATGCATTTTCGTTGTCTGTGGTAATGCTGACTGCATTTTTCTTAAGATGTGTGACATAGCAGACAGCAAATGTTATATTCAAATTTGAAGTATGAATCAGAAAGAATTTCATTCCAACATCTGAAAAGTGTAAGTTAAAAATCTGTAACGAAACCAGTATCATATCCATGGAGTAAAAAATTAATCGATGAACATTCTTTTTGTAGCAAAAAACAAAAAATTCAATTGCTTGCTGTATGATTACTGTGTACAGGTCCCTAAGCTGCAGGTTGCCAAGAGTCGTTAACCAGAAGCTTTTTCCCACGGTAGGTATCCTGTCAAAGGATCAGAGAACAAAGTCTGGACAAAGTCTCGCAGTCCGGTGTCCCAAACTTCACAGAACTGTAACCTCCAATTGGGTGGTTCGATTGCCTCTGTCCCAAGCCCAGGTGCTCTATCCTTCGATCCTTCATTCTGTGCCTCCTGCCAGTCAACAACATAGGTAGCTACTCTTCTGAAAAATTTAGCTCTAAAAGTTTCCCACACTTGATACTTGTAATGGTTTATGACAGCATTGCTTTTTGGTACGTCAAAAAACCCAGATCCTCGTTTCAACCTAAAGTGATGAACGACATTGAGAAGTGTTGGATCAAGCAAGTCTGGCCGGACAAACGATTTGTGCCTCTCGGGACTCTGGAGCCGGCAAGTGTACCCCAGTGTCACCCCCTGCGGTGGATATGATGTTAAACCCGATGGTCCGAAGCTATGGCAGGCCGTTCTAATCTCTGCAATGGTAGTTGAATTGGAGGTTGAAGCAGATGAGTTAGCAATGAGAGAATGAAGGGCATTGCGGCCGGCAGTATGGTATTCTTGCTGACGGCGATACTTTGAAGGAAAGTAGAAAAACTCATCAACATCAAAGAAACCGACCCACTTGCATTCATCTCTAGCTCTCAAAGCACAGTGTGAGAAACCTGCTTCTTGGGTTTTAATCCATGGCCAGGTCAGCCTACTGATATTGTAGTTTTCCAGGTTGAGCTCTCTGACGACTTCTTCAATGTCATCATAACTATTGTTGTCGTAGATAAACCAGCGCCCTACTCCAAGCCAAGCGTGGTACATAATCCACTCACGAAGTGCTGCTGCTTGATTCCACACCATTGTGCACACACAAAGCTCATGTTTTTCTTGATTTCTTTGCAGTTCATTCAGCTTGGAGTTGGAGAGTCTGGCCACTGAGGGCAGAGTCACCTGAAGGTGGGCTTTCGTATTGACACTGCCACGGCCCACAGTAACCCGAATTCCCTTTTCCTTGTCTAAAGTGCTCGACACACCAGCCGGCAAGGAGCACCTGATAATTTCTTGAGCTGCAGTTACTGCCTTTGTGGTAAGCACATAGTCTCCGTTATCGTTGGAATTTCTCAGTCTAAAGTGGCAGCTGAATTCAGTCGGATTTGATTCTTTGTGTGGTCGGAGATTTAGTCCCTTGGCAAACACCACAACCGTATCACCGTCAATAGCTGCCTCATAAACCACCCTCTCCCACGAGGCAACTGGATGCCTATTTCTGACCAACCAATGGTCATCGGCTTCCACGCCAACCCACCTCAAGTCCACGGCGGAGGCCGAATAATTCCGTGGTGGCAGTGGACATCTGGCAATTGATCGGAACTCATCGTACCTGTCCGTGGACAGAACTGACTGTTCGAGAGTCTCTTGTTTCAAACCTCTAGCGACAGATTTGTGGTATAAACAAACCAATTTCTCATCTCGGCTGAATTCGCCAGTGACCATCAAAAGCAAGTGGTCTGGGAAAAGGACTCGTCTTTCGATTCTCAAAGGCGAATACTTACCGCTCAAAGAATTGTCAAGTGTAGACTTGCTGGCAGAGGTGGACAAGCGGGAGAGAGTGGTGGAAGAGACATCGAGAACTGGCCGGAAGGACGCCGCCGCAATCGAGAACCACCGACTTGAAGAGAGAAACAAGAGAAAAGCAAAAAAGGCAAGGCAAAGAAACAGAGATCTTCGAGTCAAAAACTGA

mRNA sequence

ATGCCTGTTCATTCAGCTTGGAGTTGGAGAGTCTGGCCACTGAGGGCAGAGTCACCTGAAGATTTGTGGTATAAACAAACCAATTTCTCATCTCGGCTGAATTCGCCAGTGACCATCAAAAGCAAGTGGTCTGGGAAAAGGACTCGTCTTTCGATTCTCAAAGGCGAATACTTACCGCTCAAAGAATTGTCAAGTGTAGACTTGCTGGCAGAGGTGGACAAGCGGGAGAGAGTGGTGGAAGAGACATCGAGAACTGGCCGGAAGGACGCCGCCGCAATCGAGAACCACCGACTTGAAGAGAGAAACAAGAGAAAAGCAAAAAAGGCAAGGCAAAGAAACAGAGATCTTCGAGTCAAAAACTGA

Coding sequence (CDS)

ATGCCTGTTCATTCAGCTTGGAGTTGGAGAGTCTGGCCACTGAGGGCAGAGTCACCTGAAGATTTGTGGTATAAACAAACCAATTTCTCATCTCGGCTGAATTCGCCAGTGACCATCAAAAGCAAGTGGTCTGGGAAAAGGACTCGTCTTTCGATTCTCAAAGGCGAATACTTACCGCTCAAAGAATTGTCAAGTGTAGACTTGCTGGCAGAGGTGGACAAGCGGGAGAGAGTGGTGGAAGAGACATCGAGAACTGGCCGGAAGGACGCCGCCGCAATCGAGAACCACCGACTTGAAGAGAGAAACAAGAGAAAAGCAAAAAAGGCAAGGCAAAGAAACAGAGATCTTCGAGTCAAAAACTGA

Protein sequence

MPVHSAWSWRVWPLRAESPEDLWYKQTNFSSRLNSPVTIKSKWSGKRTRLSILKGEYLPLKELSSVDLLAEVDKRERVVEETSRTGRKDAAAIENHRLEERNKRKAKKARQRNRDLRVKN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G016060.1CmaCh04G016060.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 88..119
scor

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G016060MELO3C034120.2Melon (DHL92) v3.6.1cmamedB740
CmaCh04G016060Cla97C05G107000Watermelon (97103) v2cmawmbB762
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G016060Cucumber (Gy14) v2cgybcmaB130
CmaCh04G016060Cucumber (Gy14) v2cgybcmaB648
CmaCh04G016060Melon (DHL92) v3.6.1cmamedB756
CmaCh04G016060Silver-seed gourdcarcmaB0530
CmaCh04G016060Silver-seed gourdcarcmaB1170
CmaCh04G016060Cucumber (Chinese Long) v3cmacucB0814
CmaCh04G016060Cucumber (Chinese Long) v3cmacucB0819
CmaCh04G016060Cucumber (Chinese Long) v3cmacucB0861
CmaCh04G016060Watermelon (97103) v2cmawmbB708
CmaCh04G016060Watermelon (97103) v2cmawmbB772
CmaCh04G016060Wax gourdcmawgoB0902
CmaCh04G016060Cucurbita maxima (Rimu)cmacmaB113
CmaCh04G016060Cucurbita maxima (Rimu)cmacmaB410
CmaCh04G016060Cucurbita maxima (Rimu)cmacmaB532
CmaCh04G016060Cucurbita maxima (Rimu)cmacmaB541
CmaCh04G016060Cucumber (Gy14) v1cgycmaB0592
CmaCh04G016060Cucumber (Gy14) v1cgycmaB0804
CmaCh04G016060Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G016060Cucurbita moschata (Rifu)cmacmoB732
CmaCh04G016060Cucurbita moschata (Rifu)cmacmoB748
CmaCh04G016060Wild cucumber (PI 183967)cmacpiB693
CmaCh04G016060Wild cucumber (PI 183967)cmacpiB698
CmaCh04G016060Wild cucumber (PI 183967)cmacpiB731
CmaCh04G016060Cucumber (Chinese Long) v2cmacuB685
CmaCh04G016060Cucumber (Chinese Long) v2cmacuB687
CmaCh04G016060Cucumber (Chinese Long) v2cmacuB724
CmaCh04G016060Melon (DHL92) v3.5.1cmameB653
CmaCh04G016060Melon (DHL92) v3.5.1cmameB668
CmaCh04G016060Melon (DHL92) v3.5.1cmameB674
CmaCh04G016060Watermelon (Charleston Gray)cmawcgB658
CmaCh04G016060Watermelon (Charleston Gray)cmawcgB667
CmaCh04G016060Watermelon (Charleston Gray)cmawcgB684
CmaCh04G016060Watermelon (97103) v1cmawmB702
CmaCh04G016060Watermelon (97103) v1cmawmB717
CmaCh04G016060Watermelon (97103) v1cmawmB747
CmaCh04G016060Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G016060Cucurbita pepo (Zucchini)cmacpeB724
CmaCh04G016060Bottle gourd (USVL1VR-Ls)cmalsiB653
CmaCh04G016060Bottle gourd (USVL1VR-Ls)cmalsiB678
CmaCh04G016060Bottle gourd (USVL1VR-Ls)cmalsiB694