CmaCh04G014510 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G014510
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionNuclear pore complex protein Nup136b
LocationCma_Chr04 : 7386609 .. 7393319 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCCATTTCCTGATCTCCTCCTCATGAATGTTTCTCTCGCCTTGGTTCTCATTCATGCTTGGAACTTGATTGAGATTTGAGAAACTGTGTTGTTCTTCCTCGCCTTGGTTCTCATTCATGGCGACTGCAAGGGAACAGAAAAGCGGGGAAGAAGAAGGGTTGAGAACGGCGGGGAAGTTTGCAGATAAAAAATTCTTTAGGAAACCACCGAAAAAACCTTATGATCGGCCGCCGACTACCCTAAGAACATCTGGAAACAATTCGTGGATCTTGAAGCTCGTTGATCCGGCTCAAAGGCTCATTTCCTCTGGTTCTCAGATGCTTTTTTCCTCCGTGTTCCGAAATTTCCCTCACCGTTTACCGTCTTGTATTTCGTCTCCAGGTTTCAGTTTCAACTTCTTAATGATGTTCTTATGGCTCTGTAGTGGATTATTCAAAGATGCTTTTGCTGGAGTTGATTTTTGTGATTTGCGACTGTTTGTTGCTTTTCAATGTTCGATTTTATTTCGCAAACTTCTTGAGATTAAGTTAGTCGATCTGGTTCGTAAAATGCTTCCATGTAATGATTATTTTGATATCTTGTAACTTTTTCATCCATCAAAGAAGTCTTAGCTAATTCAAAATCTACTGGCACGCACTAGACTTGAACGGGTTTTCTTTTAGGAACTTCATAGTTGAGTAGCATCTGAATATATATATTTTTTTTTTCTGTTTATGCATTTGATGGCATCAGAATCAATCCAGTCAAGAAGGGATGACAAGAAGGCCGATGTAACGGTAAGTTTTCTTTCGGTGTCGAGCGGGTGCTCGTGCATAGAAGATATGAATGCTCTTGAAAGTTGGTGCTTGAACTTGATGGTCATTAATTATTGTATTATTATTCAAGAGAAATTGGTTATCTATATCGTTCTGGGCTGTGTTCTGAATGCACTTGCTTTGATCAGTCTAATTGGAGAATTTCTTATGGTATGGAAATTTACTTGCAAAGGATCCTTTTGAAGTCCAAGTAGCAGCAGCTAATGTAGGTGATAATCAGAATAGAGCCGATCGATTTGTGATGGTGGAGCTTGAAAAAGCTATGAAGCAAAAGACCTTCACCAGGTAAGTTTTGCAGTATATGTTTATTTTGCCTTACATGAGTACTATTTTAGGTAGTTCGGATTTTATTTTCTTATTGTTAATAGACTTGTTCTTTTGATCTTGGGATAATTGCTATGGCTCCTTAAAGTGAAACCCACTCTGCAGGTCTGAGATTGATCATTTGACGGCTCTAATGCATTCAAAAAATGTTGATTTGCCTGATGTGAATGAGGAGAAAAGGGTTAAGTTTATCTCTTCTATTCCAGAATCTAACAGGAACGAGTTTAAAAAAATATCAAATTCAGAAGTTAGAATGCGCAGGCAATCGTTCCCAACTCCCTTCTTGAGTTCAAGTGTACGGGTCTTTCTTTTCATCCCCATTTCTTTCTCTCGTGATTTTCGTGCTGAGAGTTCCCAAATAAGTTATGTTCGATATGCTTTTTTTGATACTGTGATCACATTTTGTGGCTAAAACGTCTTCAGGTCCTTGATGAAGATATTTCTTCACCTGCAGAGATAGCTAGAGCATACATGGTGAGTAGGCAGCCAAAACTTTGTCCTTCAATGCCATCTTTGCGGGCTCAAGGACTTGGGGAAAATTCTGCTGGTCCAACTAGTACATCATTCTCTTCAAAATCAATAGATATGTTGCTTGTGCCATCATCTACTAGTCAGGTACTTGTGGGAATGATTCCAGCAACATTCATTTCCTAGGTTTTATGAGACCCCTAGTATGTTTTTTTGGCCGTGCTTTTGAGTGGGATCACTGTTAACCGGAGATTGTAATCTTGAAATAAGTTAGATTTTATAATCTAGTCATCCTGCATGTCTCAGATGCTCTGTTTCATGTAGTTGCACGTTAAATCATCTTACTGTGTTGTTTCTACCATATGCAGGGTTTGAAACGTAGGAGTTCATTTTTTGATAATCACATTGGACCCAATGTTCCTCTGCGCAGAATTCGACAAAAACCTAACATTCATCTCTCAAAGGGATTAAGCTTACCCGTTTCTACTAGACCTATTTCTGGTCCTGTAGATAGACTTAGTTTTGATGCTTCTCAGAGCTCCAAATTTGGGAAAGTTCATAATTTTCCATCTTCCATTTGGAACTCACAATTGTCTCTTAAACCCAAGAAAAATTCTGCAAGAAAGTTTATTATGAACGTGGAGAGTGATGACATTCGTGGTGCAGGCAGCAGCTCTATTTATACTCCTTCAAGGTCTTATAAGATGGCTTCTAAGATATTGGAGCAGCTCGATAAGTTGACCCCTCCAAAGGAGAAAGTTAAACGACTTCCTGTTGGGGAAATATCTCCCCCTAAGCTGTCACCATTCACAGTAGATGGGCATCTCAAAATTGTGAAGGATGTGGACTTACCCAGAGATGAAGAACTTGTTCATGACAACAAGCAGTCAATTAGTTTGCATGGCGTTCCATATCATGACAACCAAGAAAACACTTCACAAAATAAAGAGAAGCTGGAAAATATGAAACCATCGGATCCTCATCATAGATGTGCTCTACTGAAGGACTCAGGGTCCATAGGTTCAAGTAAGGATTCCATGATTGATCTTGGAGTGCCTGCGCCTGCTGTGGTGAAATCTACTATTCAGCCCCCAAAAAACAAACTGGCGTTTCTGATGTGGCCTGACAAGGTTCGTAATCTTTTAACTTCCCAAAATGGAATGGTAAAACATTGAGGTCTCATGGTAAAAATCAGAGTTCAAACATTTTATGTGATGCTTACAGACTCGCTTTCTGCCATTGATTAAAGTACCATTTTGTAGTTTTTTTGCTCTCTTTCTTGATGAGGGTGTTAGATTCTGTTACGATAATGTTTGAAGTTATTTCACTTACCTGCGTTCAAGTAAAACTTCAGACACCTAATTAGAATACATACATGGTTTTCATTTTTTCTTCTGCATATCTTTTACTTGAAGGATTCTAAGTAATGCACCTCTGATCAGATATTATGTTCCTTCTTGTTTCTTTCCTTGGGATATGTTTGTTTAAACCTTTGAACTTTTAACCAGTCTCACTGCCTTTCTCAATAATAGGATCGTGTTGACCATGATGAAAGTTCTCCTGATAGAGTTGCACCTGCTACCGCGGAGGATAGGGAAGGTGACATTTCTTTGGCTGTGAGACAAACAACTGCTAGTGAGTCTCTAGCACCATCAAAGCCACAAACTGCATCTGAAGTGATAGTGGGTTCTCCTCTCAACAGAAGTTCTGATTTGAAAACTTCTGAAGGTAGCGTTCATGATGATATGGATACCAGTTTTACGTTCCAAATTGCACCTTCACAACCAGAAACTATTGATTCTGCACCCACCAATTCTTTTGGAAACAATGATCTTCCAGAAAATAAGCGAATTGATTCTCCAGTTTTTAGCTTTGGAAATAATGTCTCTCCACGAAAACAGCCAAACGCTAGTTCTACTGCATTTGATTTTGGGAATAAGGATGCTTCTCGAACAGAATTATGTGCTGCTTCCGAAAATGGCAATGGAGCTTCATTCCCATACACGCAGTGGAATCCAGCTTCTTCATGTTCAGATGTCCAAGGATCAGTGTATTTAAACGCCGTTGCTTCTTCAAATCATAAGCTAGATTGCTCTTGGGGGTCAGTATATTCCTTTCGATCATCTATTCAGAAGTACAGTTTTGTAGCCTTTCCATTATCTTTTATCAATTAGAGAAACTTGCGCATGTCTCCTATGGGTTTTGAGTGGCTTGATTGATACCTTGTCTCCCCTTCTCTTCTAATCTCTCGTTCACTTTTCTTATATTTTAAGAAGACAAAAACCTTGAATGCACGGAAAATATTAGGTGGAGGCATTGAAAATTCGTTCTAACTGGATGTGAATTTCATAGAAAGAGAATCATTTGTTGAAGTTCTTAAGGGAAGAAAAGAACTTTATAGCACATGCCTCAAGAGCTTCTAGATGACATTTATTTGAACATTTTTTCATTTCATCTTTCTTCACTTCTGACATTATTTTTGCATTCGTTCACTTTTTATGCCTGGCAAGTTTGTTTCCTTCATGTTGTTCGTTGTTTACAGTTCATGCAATTTTGTCCATTGAAGAATCGGCGTCATGAAAACTGATAGTGATGATATTTCAAATTTTGTTTTCACCAGGACATGCAATGATGCATTCTCATCTTCTGCCTCCATATCAGCTGGACTTGCAGTCTCATTTTGCCCGACTGCTAGATATCAAAGTTTAAATAATGGCCTTTCCATTTCATGTCCATCTCAATACTCATCGTGCAGTCCGCTAACTCCATCTATGGGGCAAAGTTCATCAAGATATATCTTCCTCTCAGCCAAATGTGCCAGCAACGATGCTAATATAACCACCAATGACAAGCACCCGTCAACCACAAATGTGATAACTTCATCTGCTCCGTCGGCTATGGGCTTAGGAACTCATGAAGACAAGATCAAGCAGGATGCAAGCCTGCACATTGCAAATAACACTTATTTCAGTAGCATATCTACACCAGCAAATTCTCACTATAATATGTTCAGCTTCAATCCTGGAGCAACGCCTTCGTTTGTGAATAATCATCAGCTGAGAACACCTACTGTTAGCAGTGCACCTGAGCTTAGTGCTCAGGGAGTTTCTGCTGGAAAGGAATTTACAGCTAATGCGGAACAAACTTCAATCATTATGGGATCATTCATGTCTCATGCATCATCGGTGATGGCTGGAAAAGCATCCATCTCTTCTGGCATTTCTTTTGGTTGCTCATCTCCTGCTTCTGAACTGTTTCATTCAGGAAGCAGGCCATCGGAATTTCCCATCACTGGGTTTACTTGTGCCCAAGCAACTTCAACCCATTTTTCTACTCCTAGGACACATCTTGGGTTCGAGTCATTTACAGGGGCATCTTTCAGTTCAATATGTTCTACAACCTCAGCAGCAGCAATGGCAGGTTCCTCATCGAAGACAGTTTCAAGTAATTCTCATCACACAGTTGCTTTTAGAGTTTCTACAGGTAACAAGGACTGTGAAGATCAGGGTACCTACAAGGACAATGTTCCACTTTTCAGCCAAAAGCCAGTCCCACCCCCTTCATCAGGATTCTCTTTTAGTCAAGCCACCCCTGAATCAAATCCCTTTCTAGTTGGAAAGCAGCAGACATTGGCTGAACCCCAAAACTCTTCTCCATATATTGCTCATTCTAGCAGCTTAGAAGCTAGAGGCAGCTTCCCCTTGAGTGCTGGCGGCGGTAACAAGGCTAACCGGAGACTTGTGAAGGTCAAACGAAAGAAATAAAGAAAACATCTCTGGCAGAGTTGCTAGAAAACAACCCCAAGTGTCCACCTCCCAAATTCTTGTAAATTTTATAATCTGATTTACGGTCACATTTATGTCCATCCCTCTTCAACTCCCGCGAAGAAAAGAGTGGCTTTAAGGTTGAGGAAAGCCAGTGATTTCAGGTACGTACGCAAATTCTTTTATCATTTAAAATAGTGCTGCCTGCTAAACATATGAATTTGACAAGGAGATTGTCTTTTACAACATTCAACGGAGTCATCCATTCTAGGAAAAGTAGCTTCCTGTTGTAATCCTGTAGTTTCTCATTTTACACAAATAACCTATTTAGAATGATTTTGGAAGTGCTTAAAAATACTTTCTTAAACGCTTACAAAACTTTTTCTTAAGCACTTAAAAAATCATTTCAAATTGGCCTATGATTGATTTTCTCAATTCTCTTATTATACCTATATTTGACCTAGATTTGTGGAGTCCAAATTTGATACAGGCTATGACGATGTAGTTTCTTCACCGTATGGGATCCGCAAAGTTCACAAGACAAGAGTTCAAGTAAGAACAAACCCTTTATAAACTCTAGTGCTTTCTTTTCTTTTCTACTTTTCTACCTCCAAACACCATACACATTTGAAATATTCTGTTATAGAGTCTCTATCTCTCTGTCTTTTCTGAATTATTTGTTGGGTCGGTCTAATACAAAGAATATAGTTCTGCATAACATGGAGTTGCATCCAGACACACCCCACCTCCCACAACAACCCAAAACAGCCCCATTAGGCTAATAATATATATTTTTTTCATCAATCATTGAAAGTTTTCAAACCAAACAAGGCAAAAAAGGAAGTCAAAACATTCACAAGGAGCTTAAGTTCATTGAACAGACCATGAAGCAGACACTCTCTGCCATATTTTGTGCTATAAAGTGAGAATACAAGGGGGGAAAAGGTATTTGGCCTTGTGTGAAATAGAGACCATGCAACTGGCTACACCTCTAAAAAAACAATCTCTTTTTCTTCTCTAAATTTTGTGTACCCTTGCCTTCTCGGTTTCTTACTTGTGTTAATATCTCATTACTATTTTATAATATAGAGAGAGTATGGCCTTGCATGAAATGCAAAACAGTTGTCTAGTTCCAATTGAAAATACAACCACAAACCACAAAAACCTTTGTCTAAATTGTGCCAAAGTTTTATTTTAATTCTTAAAATTTGAAATTCGTTTCAAAATATCTCCAAAATTTCTGTATAGAATGCACGAGCAGAAAAGCTTGTGTCTACTTATGTGAACAAATCTAAACACATCCCAAAAGTAAATTTGAAGATTATAGAGTTAGAGGAG

mRNA sequence

CCTCCATTTCCTGATCTCCTCCTCATGAATGTTTCTCTCGCCTTGGTTCTCATTCATGCTTGGAACTTGATTGAGATTTGAGAAACTGTGTTGTTCTTCCTCGCCTTGGTTCTCATTCATGGCGACTGCAAGGGAACAGAAAAGCGGGGAAGAAGAAGGGTTGAGAACGGCGGGGAAGTTTGCAGATAAAAAATTCTTTAGGAAACCACCGAAAAAACCTTATGATCGGCCGCCGACTACCCTAAGAACATCTGGAAACAATTCGTGGATCTTGAAGCTCGTTGATCCGGCTCAAAGGCTCATTTCCTCTGGTTCTCAGATGCTTTTTTCCTCCGTGTTCCGAAATTTCCCTCACCGTTTACCGTCTTGTATTTCGTCTCCAGAATCAATCCAGTCAAGAAGGGATGACAAGAAGGCCGATGTAACGGATCCTTTTGAAGTCCAAGTAGCAGCAGCTAATGTAGGTGATAATCAGAATAGAGCCGATCGATTTGTGATGGTGGAGCTTGAAAAAGCTATGAAGCAAAAGACCTTCACCAGGTCTGAGATTGATCATTTGACGGCTCTAATGCATTCAAAAAATGTTGATTTGCCTGATGTGAATGAGGAGAAAAGGGTTAAGTTTATCTCTTCTATTCCAGAATCTAACAGGAACGAGTTTAAAAAAATATCAAATTCAGAAGTTAGAATGCGCAGGCAATCGTTCCCAACTCCCTTCTTGAGTTCAAGTGTCCTTGATGAAGATATTTCTTCACCTGCAGAGATAGCTAGAGCATACATGGTGAGTAGGCAGCCAAAACTTTGTCCTTCAATGCCATCTTTGCGGGCTCAAGGACTTGGGGAAAATTCTGCTGGTCCAACTAGTACATCATTCTCTTCAAAATCAATAGATATGTTGCTTGTGCCATCATCTACTAGTCAGGGTTTGAAACGTAGGAGTTCATTTTTTGATAATCACATTGGACCCAATGTTCCTCTGCGCAGAATTCGACAAAAACCTAACATTCATCTCTCAAAGGGATTAAGCTTACCCGTTTCTACTAGACCTATTTCTGGTCCTGTAGATAGACTTAGTTTTGATGCTTCTCAGAGCTCCAAATTTGGGAAAGTTCATAATTTTCCATCTTCCATTTGGAACTCACAATTGTCTCTTAAACCCAAGAAAAATTCTGCAAGAAAGTTTATTATGAACGTGGAGAGTGATGACATTCGTGGTGCAGGCAGCAGCTCTATTTATACTCCTTCAAGGTCTTATAAGATGGCTTCTAAGATATTGGAGCAGCTCGATAAGTTGACCCCTCCAAAGGAGAAAGTTAAACGACTTCCTGTTGGGGAAATATCTCCCCCTAAGCTGTCACCATTCACAGTAGATGGGCATCTCAAAATTGTGAAGGATGTGGACTTACCCAGAGATGAAGAACTTGTTCATGACAACAAGCAGTCAATTAGTTTGCATGGCGTTCCATATCATGACAACCAAGAAAACACTTCACAAAATAAAGAGAAGCTGGAAAATATGAAACCATCGGATCCTCATCATAGATGTGCTCTACTGAAGGACTCAGGGTCCATAGGTTCAAGTAAGGATTCCATGATTGATCTTGGAGTGCCTGCGCCTGCTGTGGTGAAATCTACTATTCAGCCCCCAAAAAACAAACTGGCGTTTCTGATGTGGCCTGACAAGGATCGTGTTGACCATGATGAAAGTTCTCCTGATAGAGTTGCACCTGCTACCGCGGAGGATAGGGAAGGTGACATTTCTTTGGCTGTGAGACAAACAACTGCTAGTGAGTCTCTAGCACCATCAAAGCCACAAACTGCATCTGAAGTGATAGTGGGTTCTCCTCTCAACAGAAGTTCTGATTTGAAAACTTCTGAAGGTAGCGTTCATGATGATATGGATACCAGTTTTACGTTCCAAATTGCACCTTCACAACCAGAAACTATTGATTCTGCACCCACCAATTCTTTTGGAAACAATGATCTTCCAGAAAATAAGCGAATTGATTCTCCAGTTTTTAGCTTTGGAAATAATGTCTCTCCACGAAAACAGCCAAACGCTAGTTCTACTGCATTTGATTTTGGGAATAAGGATGCTTCTCGAACAGAATTATGTGCTGCTTCCGAAAATGGCAATGGAGCTTCATTCCCATACACGCAGTGGAATCCAGCTTCTTCATGTTCAGATGTCCAAGGATCAGTGTATTTAAACGCCGTTGCTTCTTCAAATCATAAGCTAGATTGCTCTTGGGGGACATGCAATGATGCATTCTCATCTTCTGCCTCCATATCAGCTGGACTTGCAGTCTCATTTTGCCCGACTGCTAGATATCAAAGTTTAAATAATGGCCTTTCCATTTCATGTCCATCTCAATACTCATCGTGCAGTCCGCTAACTCCATCTATGGGGCAAAGTTCATCAAGATATATCTTCCTCTCAGCCAAATGTGCCAGCAACGATGCTAATATAACCACCAATGACAAGCACCCGTCAACCACAAATGTGATAACTTCATCTGCTCCGTCGGCTATGGGCTTAGGAACTCATGAAGACAAGATCAAGCAGGATGCAAGCCTGCACATTGCAAATAACACTTATTTCAGTAGCATATCTACACCAGCAAATTCTCACTATAATATGTTCAGCTTCAATCCTGGAGCAACGCCTTCGTTTGTGAATAATCATCAGCTGAGAACACCTACTGTTAGCAGTGCACCTGAGCTTAGTGCTCAGGGAGTTTCTGCTGGAAAGGAATTTACAGCTAATGCGGAACAAACTTCAATCATTATGGGATCATTCATGTCTCATGCATCATCGGTGATGGCTGGAAAAGCATCCATCTCTTCTGGCATTTCTTTTGGTTGCTCATCTCCTGCTTCTGAACTGTTTCATTCAGGAAGCAGGCCATCGGAATTTCCCATCACTGGGTTTACTTGTGCCCAAGCAACTTCAACCCATTTTTCTACTCCTAGGACACATCTTGGGTTCGAGTCATTTACAGGGGCATCTTTCAGTTCAATATGTTCTACAACCTCAGCAGCAGCAATGGCAGGTTCCTCATCGAAGACAGTTTCAAGTAATTCTCATCACACAGTTGCTTTTAGAGTTTCTACAGGTAACAAGGACTGTGAAGATCAGGGTACCTACAAGGACAATGTTCCACTTTTCAGCCAAAAGCCAGTCCCACCCCCTTCATCAGGATTCTCTTTTAGTCAAGCCACCCCTGAATCAAATCCCTTTCTAGTTGGAAAGCAGCAGACATTGGCTGAACCCCAAAACTCTTCTCCATATATTGCTCATTCTAGCAGCTTAGAAGCTAGAGGCAGCTTCCCCTTGAGTGCTGGCGGCGGTAACAAGGCTAACCGGAGACTTGTGAAGAAAAGAGTGGCTTTAAGGTTGAGGAAAGCCAGTGATTTCAGATTTGTGGAGTCCAAATTTGATACAGGCTATGACGATGTAGTTTCTTCACCGTATGGGATCCGCAAAGTTCACAAGACAAGAGTTCAAGTAAGAACAAACCCTTTATAAACTCTAGTGCTTTCTTTTCTTTTCTACTTTTCTACCTCCAAACACCATACACATTTGAAATATTCTGTTATAGAGTCTCTATCTCTCTGTCTTTTCTGAATTATTTGTTGGGTCGGTCTAATACAAAGAATATAGTTCTGCATAACATGGAGTTGCATCCAGACACACCCCACCTCCCACAACAACCCAAAACAGCCCCATTAGGCTAATAATATATATTTTTTTCATCAATCATTGAAAGTTTTCAAACCAAACAAGGCAAAAAAGGAAGTCAAAACATTCACAAGGAGCTTAAGTTCATTGAACAGACCATGAAGCAGACACTCTCTGCCATATTTTGTGCTATAAAGTGAGAATACAAGGGGGGAAAAGGTATTTGGCCTTGTGTGAAATAGAGACCATGCAACTGGCTACACCTCTAAAAAAACAATCTCTTTTTCTTCTCTAAATTTTGTGTACCCTTGCCTTCTCGGTTTCTTACTTGTGTTAATATCTCATTACTATTTTATAATATAGAGAGAGTATGGCCTTGCATGAAATGCAAAACAGTTGTCTAGTTCCAATTGAAAATACAACCACAAACCACAAAAACCTTTGTCTAAATTGTGCCAAAGTTTTATTTTAATTCTTAAAATTTGAAATTCGTTTCAAAATATCTCCAAAATTTCTGTATAGAATGCACGAGCAGAAAAGCTTGTGTCTACTTATGTGAACAAATCTAAACACATCCCAAAAGTAAATTTGAAGATTATAGAGTTAGAGGAG

Coding sequence (CDS)

ATGGCGACTGCAAGGGAACAGAAAAGCGGGGAAGAAGAAGGGTTGAGAACGGCGGGGAAGTTTGCAGATAAAAAATTCTTTAGGAAACCACCGAAAAAACCTTATGATCGGCCGCCGACTACCCTAAGAACATCTGGAAACAATTCGTGGATCTTGAAGCTCGTTGATCCGGCTCAAAGGCTCATTTCCTCTGGTTCTCAGATGCTTTTTTCCTCCGTGTTCCGAAATTTCCCTCACCGTTTACCGTCTTGTATTTCGTCTCCAGAATCAATCCAGTCAAGAAGGGATGACAAGAAGGCCGATGTAACGGATCCTTTTGAAGTCCAAGTAGCAGCAGCTAATGTAGGTGATAATCAGAATAGAGCCGATCGATTTGTGATGGTGGAGCTTGAAAAAGCTATGAAGCAAAAGACCTTCACCAGGTCTGAGATTGATCATTTGACGGCTCTAATGCATTCAAAAAATGTTGATTTGCCTGATGTGAATGAGGAGAAAAGGGTTAAGTTTATCTCTTCTATTCCAGAATCTAACAGGAACGAGTTTAAAAAAATATCAAATTCAGAAGTTAGAATGCGCAGGCAATCGTTCCCAACTCCCTTCTTGAGTTCAAGTGTCCTTGATGAAGATATTTCTTCACCTGCAGAGATAGCTAGAGCATACATGGTGAGTAGGCAGCCAAAACTTTGTCCTTCAATGCCATCTTTGCGGGCTCAAGGACTTGGGGAAAATTCTGCTGGTCCAACTAGTACATCATTCTCTTCAAAATCAATAGATATGTTGCTTGTGCCATCATCTACTAGTCAGGGTTTGAAACGTAGGAGTTCATTTTTTGATAATCACATTGGACCCAATGTTCCTCTGCGCAGAATTCGACAAAAACCTAACATTCATCTCTCAAAGGGATTAAGCTTACCCGTTTCTACTAGACCTATTTCTGGTCCTGTAGATAGACTTAGTTTTGATGCTTCTCAGAGCTCCAAATTTGGGAAAGTTCATAATTTTCCATCTTCCATTTGGAACTCACAATTGTCTCTTAAACCCAAGAAAAATTCTGCAAGAAAGTTTATTATGAACGTGGAGAGTGATGACATTCGTGGTGCAGGCAGCAGCTCTATTTATACTCCTTCAAGGTCTTATAAGATGGCTTCTAAGATATTGGAGCAGCTCGATAAGTTGACCCCTCCAAAGGAGAAAGTTAAACGACTTCCTGTTGGGGAAATATCTCCCCCTAAGCTGTCACCATTCACAGTAGATGGGCATCTCAAAATTGTGAAGGATGTGGACTTACCCAGAGATGAAGAACTTGTTCATGACAACAAGCAGTCAATTAGTTTGCATGGCGTTCCATATCATGACAACCAAGAAAACACTTCACAAAATAAAGAGAAGCTGGAAAATATGAAACCATCGGATCCTCATCATAGATGTGCTCTACTGAAGGACTCAGGGTCCATAGGTTCAAGTAAGGATTCCATGATTGATCTTGGAGTGCCTGCGCCTGCTGTGGTGAAATCTACTATTCAGCCCCCAAAAAACAAACTGGCGTTTCTGATGTGGCCTGACAAGGATCGTGTTGACCATGATGAAAGTTCTCCTGATAGAGTTGCACCTGCTACCGCGGAGGATAGGGAAGGTGACATTTCTTTGGCTGTGAGACAAACAACTGCTAGTGAGTCTCTAGCACCATCAAAGCCACAAACTGCATCTGAAGTGATAGTGGGTTCTCCTCTCAACAGAAGTTCTGATTTGAAAACTTCTGAAGGTAGCGTTCATGATGATATGGATACCAGTTTTACGTTCCAAATTGCACCTTCACAACCAGAAACTATTGATTCTGCACCCACCAATTCTTTTGGAAACAATGATCTTCCAGAAAATAAGCGAATTGATTCTCCAGTTTTTAGCTTTGGAAATAATGTCTCTCCACGAAAACAGCCAAACGCTAGTTCTACTGCATTTGATTTTGGGAATAAGGATGCTTCTCGAACAGAATTATGTGCTGCTTCCGAAAATGGCAATGGAGCTTCATTCCCATACACGCAGTGGAATCCAGCTTCTTCATGTTCAGATGTCCAAGGATCAGTGTATTTAAACGCCGTTGCTTCTTCAAATCATAAGCTAGATTGCTCTTGGGGGACATGCAATGATGCATTCTCATCTTCTGCCTCCATATCAGCTGGACTTGCAGTCTCATTTTGCCCGACTGCTAGATATCAAAGTTTAAATAATGGCCTTTCCATTTCATGTCCATCTCAATACTCATCGTGCAGTCCGCTAACTCCATCTATGGGGCAAAGTTCATCAAGATATATCTTCCTCTCAGCCAAATGTGCCAGCAACGATGCTAATATAACCACCAATGACAAGCACCCGTCAACCACAAATGTGATAACTTCATCTGCTCCGTCGGCTATGGGCTTAGGAACTCATGAAGACAAGATCAAGCAGGATGCAAGCCTGCACATTGCAAATAACACTTATTTCAGTAGCATATCTACACCAGCAAATTCTCACTATAATATGTTCAGCTTCAATCCTGGAGCAACGCCTTCGTTTGTGAATAATCATCAGCTGAGAACACCTACTGTTAGCAGTGCACCTGAGCTTAGTGCTCAGGGAGTTTCTGCTGGAAAGGAATTTACAGCTAATGCGGAACAAACTTCAATCATTATGGGATCATTCATGTCTCATGCATCATCGGTGATGGCTGGAAAAGCATCCATCTCTTCTGGCATTTCTTTTGGTTGCTCATCTCCTGCTTCTGAACTGTTTCATTCAGGAAGCAGGCCATCGGAATTTCCCATCACTGGGTTTACTTGTGCCCAAGCAACTTCAACCCATTTTTCTACTCCTAGGACACATCTTGGGTTCGAGTCATTTACAGGGGCATCTTTCAGTTCAATATGTTCTACAACCTCAGCAGCAGCAATGGCAGGTTCCTCATCGAAGACAGTTTCAAGTAATTCTCATCACACAGTTGCTTTTAGAGTTTCTACAGGTAACAAGGACTGTGAAGATCAGGGTACCTACAAGGACAATGTTCCACTTTTCAGCCAAAAGCCAGTCCCACCCCCTTCATCAGGATTCTCTTTTAGTCAAGCCACCCCTGAATCAAATCCCTTTCTAGTTGGAAAGCAGCAGACATTGGCTGAACCCCAAAACTCTTCTCCATATATTGCTCATTCTAGCAGCTTAGAAGCTAGAGGCAGCTTCCCCTTGAGTGCTGGCGGCGGTAACAAGGCTAACCGGAGACTTGTGAAGAAAAGAGTGGCTTTAAGGTTGAGGAAAGCCAGTGATTTCAGATTTGTGGAGTCCAAATTTGATACAGGCTATGACGATGTAGTTTCTTCACCGTATGGGATCCGCAAAGTTCACAAGACAAGAGTTCAAGTAAGAACAAACCCTTTATAA

Protein sequence

MATAREQKSGEEEGLRTAGKFADKKFFRKPPKKPYDRPPTTLRTSGNNSWILKLVDPAQRLISSGSQMLFSSVFRNFPHRLPSCISSPESIQSRRDDKKADVTDPFEVQVAAANVGDNQNRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIPESNRNEFKKISNSEVRMRRQSFPTPFLSSSVLDEDISSPAEIARAYMVSRQPKLCPSMPSLRAQGLGENSAGPTSTSFSSKSIDMLLVPSSTSQGLKRRSSFFDNHIGPNVPLRRIRQKPNIHLSKGLSLPVSTRPISGPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSLKPKKNSARKFIMNVESDDIRGAGSSSIYTPSRSYKMASKILEQLDKLTPPKEKVKRLPVGEISPPKLSPFTVDGHLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSDPHHRCALLKDSGSIGSSKDSMIDLGVPAPAVVKSTIQPPKNKLAFLMWPDKDRVDHDESSPDRVAPATAEDREGDISLAVRQTTASESLAPSKPQTASEVIVGSPLNRSSDLKTSEGSVHDDMDTSFTFQIAPSQPETIDSAPTNSFGNNDLPENKRIDSPVFSFGNNVSPRKQPNASSTAFDFGNKDASRTELCAASENGNGASFPYTQWNPASSCSDVQGSVYLNAVASSNHKLDCSWGTCNDAFSSSASISAGLAVSFCPTARYQSLNNGLSISCPSQYSSCSPLTPSMGQSSSRYIFLSAKCASNDANITTNDKHPSTTNVITSSAPSAMGLGTHEDKIKQDASLHIANNTYFSSISTPANSHYNMFSFNPGATPSFVNNHQLRTPTVSSAPELSAQGVSAGKEFTANAEQTSIIMGSFMSHASSVMAGKASISSGISFGCSSPASELFHSGSRPSEFPITGFTCAQATSTHFSTPRTHLGFESFTGASFSSICSTTSAAAMAGSSSKTVSSNSHHTVAFRVSTGNKDCEDQGTYKDNVPLFSQKPVPPPSSGFSFSQATPESNPFLVGKQQTLAEPQNSSPYIAHSSSLEARGSFPLSAGGGNKANRRLVKKRVALRLRKASDFRFVESKFDTGYDDVVSSPYGIRKVHKTRVQVRTNPL
Homology
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BLAST of CmaCh04G014510 vs. Swiss-Prot
Match: NUP1_ARATH (Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana GN=NUP1 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-24
Identity = 99/275 (36.00%), Postives = 135/275 (49.09%), Query Frame = 1 

Query: 14  GLRTAGKFADKKFFRKPPKKPYDRPPTTLRTSG-------NNSWILKLVDPAQRLISSGS 73
           GL T GKF  K   R+  K PYDRP T++R +G          W+ KLVDPAQRLI+  +
Sbjct: 16  GLGTGGKFR-KPTARRSQKTPYDRPTTSVRNAGLGGGDVRGGGWLSKLVDPAQRLITYSA 75

Query: 74  QMLFSSVFRNFPHRLPSCISSPESI---------QSRRDDKKADVTDPFEVQVAAANVGD 133
           Q LF S+ R       + + SPE           Q  +   K DV++   ++     + D
Sbjct: 76  QRLFGSLSRKRLGSGETPLQSPEQQKQLPERGVNQETKVGHKEDVSN-LSMKNGLIRMED 135

Query: 134 NQNRAD--RFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKR--VKFISSI 193
                D  +    +LEK ++ KTFTRSE+D LT L+ SK  D   +NEE+R  V  +   
Sbjct: 136 TNASVDPPKDGFTDLEKILQGKTFTRSEVDRLTTLLRSKAADSSTMNEEQRNEVGMVVRH 195

Query: 194 PESNRNEFKKISNSEVRMRRQSFPTPFLSSSVLDEDISSPAEIARAYMVSRQPKLCPSMP 253
           P S+  +     N  +        TP  S   LDE I+SPA++A+AYM SR  ++ PSM 
Sbjct: 196 PPSHERDRTHPDNGSMNTL---VSTPPGSLRTLDECIASPAQLAKAYMGSRPSEVTPSML 255

Query: 254 SLRAQGLGENSAGPTSTSFSSKSIDMLLVPSSTSQ 269
            LR Q   E+S     T F  KS  M LV   + Q
Sbjct: 256 GLRGQAGREDSVFLNRTPFPQKSPTMSLVTKPSGQ 285

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BLAST of CmaCh04G014510 vs. TrEMBL
Match: A0A0A0KWL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613440 PE=4 SV=1)

HSP 1 Score: 1021.1 bits (2639), Expect = 1.0e-294
Identity = 637/1000 (63.70%), Postives = 708/1000 (70.80%), Query Frame = 1 

Query: 128  VELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIPESNRNEFKKISNS 187
            +ELEK +KQKTFTRSEI+HLT L+HS+N DLP V++EK  KFISSIPE NR EF KI NS
Sbjct: 1    MELEKTLKQKTFTRSEINHLTTLLHSRNGDLPVVHKEKSFKFISSIPEPNRKEFVKIPNS 60

Query: 188  EVRMRRQSFPTPFLSSSVLDEDISSPAEIARAYMVSRQPKLCPSMPSLRAQGLGENSAGP 247
            EVRM R S  TP LSSSVLD DISSPAE+ARAYM SR+ K+CPSM SLRAQGLG+NS   
Sbjct: 61   EVRMGRPSISTPILSSSVLDGDISSPAEVARAYMGSRESKVCPSMRSLRAQGLGKNSTDS 120

Query: 248  TSTS---FSSKSIDMLLVPS---------------------STSQGLKRRSSFFDNHIGP 307
            TS +    +  SI   +  S                         GLKRRSSF DNHI  
Sbjct: 121  TSLTNMLLAPPSISQFIQHSLARFYETPSVFSWSGFRVEITDNENGLKRRSSFLDNHIRS 180

Query: 308  NVPLRRIRQKPNIHLSKGLSLPVSTRPISGPVDRLSFDASQSSKFGKVHNFPSSIWNSQL 367
             V LR+IRQKPNIHLSKGLSLP+S RPIS PV  LSFDASQSSKFG+  NFPS IWNSQL
Sbjct: 181  IVSLRKIRQKPNIHLSKGLSLPISARPISVPVVGLSFDASQSSKFGRTQNFPSCIWNSQL 240

Query: 368  SLKPKKNSARKFIMNVESDDIRGAGSSSIYTPSRSYKMASKILEQLDKLTPPKEKVKR-- 427
            S KP K  ARKFI NVESD+I GAGSSSIYT SRS KMASKILEQL+KLT PKEKV    
Sbjct: 241  STKPNKTFARKFITNVESDNIPGAGSSSIYTLSRSSKMASKILEQLEKLTSPKEKVSTFN 300

Query: 428  -LPVGEISPPKLSPFTVDGHLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQN 487
             LPV E   PKLSP  V GHLK VKDVDLPRD+      KQS SL G+ Y  N+ENT Q+
Sbjct: 301  LLPVREKYHPKLSPAEVVGHLKSVKDVDLPRDD------KQSNSLLGISYQGNRENTFQH 360

Query: 488  KEKLENMKPSDPHHRCALLKDSGSIGSSKDSMIDLGVPAPAVVKSTIQPPKNKLAFLMWP 547
            KEKLE +K SDPH    LLKD GS+GSSKDSM D G+P  AVVKSTIQPPK+K AF M P
Sbjct: 361  KEKLEKLKSSDPHPNRDLLKDYGSMGSSKDSMNDQGMPESAVVKSTIQPPKDKQAFPMLP 420

Query: 548  DKDRVDHDESSPDRVAPATAEDREGDISLAVRQTTASESLAPSKPQTASEVIVGSPLNRS 607
            DKD V  DESS  RVAPATAE REGD+SLAVRQTTA+ESL+P++ Q  SEVIVGS L  S
Sbjct: 421  DKDSVYQDESSAARVAPATAEVREGDVSLAVRQTTANESLSPARIQKPSEVIVGSSLYGS 480

Query: 608  SDLKTSEGSVHDDMDTSFTFQ----IAPSQPETIDSAPTNSFGNNDLPENKRIDSPVFSF 667
            SD +T   S+ DD+DT  TFQ    +  SQPET D     SFGN +LPENK+I SPVFSF
Sbjct: 481  SDSETFGDSIDDDIDTGLTFQNASSLCTSQPETND-----SFGNKNLPENKQIVSPVFSF 540

Query: 668  GNNVSPRKQPNASSTAFDFGNKDASRTELCAASENGNGASFPYTQWNPASSCSDVQGSVY 727
             NNVSPRKQP ASS A D GNKD S TELCA SEN N  S+PYTQ NP            
Sbjct: 541  VNNVSPRKQPIASSAALDIGNKDDSLTELCADSENVNEPSYPYTQCNP------------ 600

Query: 728  LNAVASSNHKLDCSWGTCNDAFSSSASISAGLAVSFCPTARYQSLNNGLSISCPSQYSSC 787
                ASSN KLD SW TCNDAFSSS S+SAGLA SF      QS N+GLSISCPS YSS 
Sbjct: 601  ----ASSNDKLDSSWRTCNDAFSSSVSLSAGLAFSFSSNPGNQSPNDGLSISCPSLYSSY 660

Query: 788  SPLTPSMGQSSSRYIFLSAKCASNDANITTNDKHPSTTNVITSSAPSAMGLGTHEDKIKQ 847
            SP T  M +SSSR IFLSA  A N+ANI         T + +  +P+  G G++ED+IKQ
Sbjct: 661  SPSTGFMNRSSSRNIFLSAPYAINNANI--------ITTMASLFSPTTSGAGSYEDEIKQ 720

Query: 848  DASLHIANNTYFSSISTPANSHYNMFSFNPGATPSFVNNHQLRTPTVSSAPELSAQGVSA 907
            DASL   N+TYFSSI+TPANSHY+MFSF   ATPSFV N  L  PTVSSA ELSA  VS 
Sbjct: 721  DASLRNVNDTYFSSITTPANSHYSMFSFGSAATPSFVTN-LLSKPTVSSATELSAPDVSV 780

Query: 908  GKEFTANAEQTSIIMGSFMSHASSVMAGKASISSGISFGCSSPASELFHSGSRPSEFPIT 967
             KEF ANAE+TS+I+ S  SH SS MAGKAS+  G+SFGCSSPASE F+SG+RPSEFPIT
Sbjct: 781  EKEFIANAEKTSMILESSTSHVSSGMAGKASVCCGLSFGCSSPASEQFNSGNRPSEFPIT 840

Query: 968  GFTCAQATST----HFSTPRTHLGFESFTGASFSSICSTTSAAAMAGSSSKTVSSNSHHT 1027
            GFT A ATST    + ST  T L FESFTGASFSSI  TTSAAA+A S+   V SNS+  
Sbjct: 841  GFTSAHATSTISTSNVSTSSTLLEFESFTGASFSSIRCTTSAAALANST--PVLSNSYPK 900

Query: 1028 VAFRVSTGNKDCEDQGTYKDNVPLFSQKPVPPPSSGFSFSQATPESNPFLVGK---QQTL 1087
            VAF VS+ N DCE+QGT KDNVPLFSQKP       FSF   T E   F VGK   QQTL
Sbjct: 901  VAFSVSSVNNDCEEQGTSKDNVPLFSQKP------KFSFGSGTSELTLFQVGKLENQQTL 956

[Close]
BLAST of CmaCh04G014510 vs. TrEMBL
Match: A0A0D2V745_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G022500 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.1e-38
Identity = 108/274 (39.42%), Postives = 154/274 (56.20%), Query Frame = 1 

Query: 1   MATAREQKSGEEEGLRTAGKFADKKFFRKPPKKPYDRPPTTLR----TSGNNSWILKLVD 60
           MATA E+ +  + GL   GKF  + F R     PYDRPPT++R    T   N W+ +LVD
Sbjct: 49  MATAGEESNPYDGGLGAGGKFRKRPFRRTTKTTPYDRPPTSIRNPSGTGDRNGWLSRLVD 108

Query: 61  PAQRLISSGSQMLFSSVFRNF----PHRLPSCISSPESIQSRRDDKKADVTDPFEVQVAA 120
           PA+RLI+S +  LF+SVF       P + P  + S  + + R +  +A    P  VQ A 
Sbjct: 109 PARRLITSSAHRLFASVFTKRLPPPPPQTPQALESGTNQEPRENQPEATSKVPSVVQGAI 168

Query: 121 ANVGDNQNRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISS 180
               +  N  +   + ELEK +KQKTFTRSEIDHLT L+ S++ D+P  NEEKR + IS 
Sbjct: 169 IGCENPVNHTEESGVAELEKILKQKTFTRSEIDHLTRLLCSRSADIPGGNEEKRPELISV 228

Query: 181 IPESNRNEFKKISNSEVRMRRQSFPTPFLSSSVLDEDISSPAEIARAYMVSRQPKLCPSM 240
           +    + EF K    E         TP +SS+V+D+ ++SPAE+A+AYM ++ PK+  S 
Sbjct: 229 VSHDKKEEFPKTPVREHVTENHLISTPVVSSTVIDDVVASPAELAKAYMGNKTPKVSASR 288

Query: 241 PSLRAQGLGENSAGPTSTSFSSKSIDMLLVPSST 267
             L+ Q    +   P++ +F S S  M LVP S+
Sbjct: 289 LGLQNQVPRGDLTCPSNKNFPSMSSTMSLVPRSS 322

[Close]
BLAST of CmaCh04G014510 vs. TrEMBL
Match: A0A0D2TS21_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G022500 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.1e-38
Identity = 108/274 (39.42%), Postives = 154/274 (56.20%), Query Frame = 1 

Query: 1   MATAREQKSGEEEGLRTAGKFADKKFFRKPPKKPYDRPPTTLR----TSGNNSWILKLVD 60
           MATA E+ +  + GL   GKF  + F R     PYDRPPT++R    T   N W+ +LVD
Sbjct: 1   MATAGEESNPYDGGLGAGGKFRKRPFRRTTKTTPYDRPPTSIRNPSGTGDRNGWLSRLVD 60

Query: 61  PAQRLISSGSQMLFSSVFRNF----PHRLPSCISSPESIQSRRDDKKADVTDPFEVQVAA 120
           PA+RLI+S +  LF+SVF       P + P  + S  + + R +  +A    P  VQ A 
Sbjct: 61  PARRLITSSAHRLFASVFTKRLPPPPPQTPQALESGTNQEPRENQPEATSKVPSVVQGAI 120

Query: 121 ANVGDNQNRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISS 180
               +  N  +   + ELEK +KQKTFTRSEIDHLT L+ S++ D+P  NEEKR + IS 
Sbjct: 121 IGCENPVNHTEESGVAELEKILKQKTFTRSEIDHLTRLLCSRSADIPGGNEEKRPELISV 180

Query: 181 IPESNRNEFKKISNSEVRMRRQSFPTPFLSSSVLDEDISSPAEIARAYMVSRQPKLCPSM 240
           +    + EF K    E         TP +SS+V+D+ ++SPAE+A+AYM ++ PK+  S 
Sbjct: 181 VSHDKKEEFPKTPVREHVTENHLISTPVVSSTVIDDVVASPAELAKAYMGNKTPKVSASR 240

Query: 241 PSLRAQGLGENSAGPTSTSFSSKSIDMLLVPSST 267
             L+ Q    +   P++ +F S S  M LVP S+
Sbjct: 241 LGLQNQVPRGDLTCPSNKNFPSMSSTMSLVPRSS 274

[Close]
BLAST of CmaCh04G014510 vs. TrEMBL
Match: A0A0D2S5E8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G022500 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 4.1e-38
Identity = 133/402 (33.08%), Postives = 196/402 (48.76%), Query Frame = 1 

Query: 1   MATAREQKSGEEEGLRTAGKFADKKFFRKPPKKPYDRPPTTLR----TSGNNSWILKLVD 60
           MATA E+ +  + GL   GKF  + F R     PYDRPPT++R    T   N W+ +LVD
Sbjct: 49  MATAGEESNPYDGGLGAGGKFRKRPFRRTTKTTPYDRPPTSIRNPSGTGDRNGWLSRLVD 108

Query: 61  PAQRLISSGSQMLFSSVFRNF----PHRLPSCISSPESIQSRRDDKKADVTDPFEVQVAA 120
           PA+RLI+S +  LF+SVF       P + P  + S  + + R +  +A    P  VQ A 
Sbjct: 109 PARRLITSSAHRLFASVFTKRLPPPPPQTPQALESGTNQEPRENQPEATSKVPSVVQGAI 168

Query: 121 ANVGDNQNRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISS 180
               +  N  +   + ELEK +KQKTFTRSEIDHLT L+ S++ D+P  NEEKR + IS 
Sbjct: 169 IGCENPVNHTEESGVAELEKILKQKTFTRSEIDHLTRLLCSRSADIPGGNEEKRPELISV 228

Query: 181 IPESNRNEFKKISNSEVRMRRQSFPTPFLSSSVLDEDISSPAEIARAYMVSRQPKLCPSM 240
           +    + EF K    E         TP +SS+V+D+ ++SPAE+A+AYM ++ PK+  S 
Sbjct: 229 VSHDKKEEFPKTPVREHVTENHLISTPVVSSTVIDDVVASPAELAKAYMGNKTPKVSASR 288

Query: 241 PSLRAQGLGENSAGPTSTSFSSKSIDMLLVPSSTSQGLKRRSSFFDNHIGPNVPLRRIRQ 300
             L+ Q    +   P++ +F S S  M LVP         RSS    ++G +    R+R 
Sbjct: 289 LGLQNQVPRGDLTCPSNKNFPSMSSTMSLVP---------RSSGHVGNLGNSFVTPRLRG 348

Query: 301 KPNIHLSKGLSLPVSTRPISGPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSLKPKKNSA 360
           +  I+    ++    +R  S  +  L    + S  FG   +   S W  Q  +       
Sbjct: 349 RSAIY---SMARTPYSRVNSSTL--LKSSGTASDAFGGPSSSSQSAW-EQKRISGSTQGV 408

Query: 361 RKFIMNVESDDIRGAGSSSIYTPSRSYKMASKILEQLDKLTP 395
            K   +V  +DI   G      P R  +  S +L   +   P
Sbjct: 409 LKRRSSVLDNDIGSVG------PIRRIRQKSNLLSSRNLSLP 429

[Close]
BLAST of CmaCh04G014510 vs. TrEMBL
Match: A0A0D2V8C4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G022500 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 4.1e-38
Identity = 133/402 (33.08%), Postives = 196/402 (48.76%), Query Frame = 1 

Query: 1   MATAREQKSGEEEGLRTAGKFADKKFFRKPPKKPYDRPPTTLR----TSGNNSWILKLVD 60
           MATA E+ +  + GL   GKF  + F R     PYDRPPT++R    T   N W+ +LVD
Sbjct: 1   MATAGEESNPYDGGLGAGGKFRKRPFRRTTKTTPYDRPPTSIRNPSGTGDRNGWLSRLVD 60

Query: 61  PAQRLISSGSQMLFSSVFRNF----PHRLPSCISSPESIQSRRDDKKADVTDPFEVQVAA 120
           PA+RLI+S +  LF+SVF       P + P  + S  + + R +  +A    P  VQ A 
Sbjct: 61  PARRLITSSAHRLFASVFTKRLPPPPPQTPQALESGTNQEPRENQPEATSKVPSVVQGAI 120

Query: 121 ANVGDNQNRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISS 180
               +  N  +   + ELEK +KQKTFTRSEIDHLT L+ S++ D+P  NEEKR + IS 
Sbjct: 121 IGCENPVNHTEESGVAELEKILKQKTFTRSEIDHLTRLLCSRSADIPGGNEEKRPELISV 180

Query: 181 IPESNRNEFKKISNSEVRMRRQSFPTPFLSSSVLDEDISSPAEIARAYMVSRQPKLCPSM 240
           +    + EF K    E         TP +SS+V+D+ ++SPAE+A+AYM ++ PK+  S 
Sbjct: 181 VSHDKKEEFPKTPVREHVTENHLISTPVVSSTVIDDVVASPAELAKAYMGNKTPKVSASR 240

Query: 241 PSLRAQGLGENSAGPTSTSFSSKSIDMLLVPSSTSQGLKRRSSFFDNHIGPNVPLRRIRQ 300
             L+ Q    +   P++ +F S S  M LVP         RSS    ++G +    R+R 
Sbjct: 241 LGLQNQVPRGDLTCPSNKNFPSMSSTMSLVP---------RSSGHVGNLGNSFVTPRLRG 300

Query: 301 KPNIHLSKGLSLPVSTRPISGPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSLKPKKNSA 360
           +  I+    ++    +R  S  +  L    + S  FG   +   S W  Q  +       
Sbjct: 301 RSAIY---SMARTPYSRVNSSTL--LKSSGTASDAFGGPSSSSQSAW-EQKRISGSTQGV 360

Query: 361 RKFIMNVESDDIRGAGSSSIYTPSRSYKMASKILEQLDKLTP 395
            K   +V  +DI   G      P R  +  S +L   +   P
Sbjct: 361 LKRRSSVLDNDIGSVG------PIRRIRQKSNLLSSRNLSLP 381

[Close]
BLAST of CmaCh04G014510 vs. TAIR10
Match: AT3G10650.1 (AT3G10650.1 BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1))

HSP 1 Score: 117.1 bits (292), Expect = 7.2e-26
Identity = 99/275 (36.00%), Postives = 135/275 (49.09%), Query Frame = 1 

Query: 14  GLRTAGKFADKKFFRKPPKKPYDRPPTTLRTSG-------NNSWILKLVDPAQRLISSGS 73
           GL T GKF  K   R+  K PYDRP T++R +G          W+ KLVDPAQRLI+  +
Sbjct: 16  GLGTGGKFR-KPTARRSQKTPYDRPTTSVRNAGLGGGDVRGGGWLSKLVDPAQRLITYSA 75

Query: 74  QMLFSSVFRNFPHRLPSCISSPESI---------QSRRDDKKADVTDPFEVQVAAANVGD 133
           Q LF S+ R       + + SPE           Q  +   K DV++   ++     + D
Sbjct: 76  QRLFGSLSRKRLGSGETPLQSPEQQKQLPERGVNQETKVGHKEDVSN-LSMKNGLIRMED 135

Query: 134 NQNRAD--RFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKR--VKFISSI 193
                D  +    +LEK ++ KTFTRSE+D LT L+ SK  D   +NEE+R  V  +   
Sbjct: 136 TNASVDPPKDGFTDLEKILQGKTFTRSEVDRLTTLLRSKAADSSTMNEEQRNEVGMVVRH 195

Query: 194 PESNRNEFKKISNSEVRMRRQSFPTPFLSSSVLDEDISSPAEIARAYMVSRQPKLCPSMP 253
           P S+  +     N  +        TP  S   LDE I+SPA++A+AYM SR  ++ PSM 
Sbjct: 196 PPSHERDRTHPDNGSMNTL---VSTPPGSLRTLDECIASPAQLAKAYMGSRPSEVTPSML 255

Query: 254 SLRAQGLGENSAGPTSTSFSSKSIDMLLVPSSTSQ 269
            LR Q   E+S     T F  KS  M LV   + Q
Sbjct: 256 GLRGQAGREDSVFLNRTPFPQKSPTMSLVTKPSGQ 285

[Close]
BLAST of CmaCh04G014510 vs. TAIR10
Match: AT5G20200.1 (AT5G20200.1 nucleoporin-related)

HSP 1 Score: 72.4 bits (176), Expect = 2.0e-12
Identity = 72/238 (30.25%), Postives = 107/238 (44.96%), Query Frame = 1 

Query: 28  RKPPKKPYDRPPTTLRTSGNNSWILKLVDPAQRLISSGSQMLFSSVFRNFPHRLPSCISS 87
           R+    PY RP  T        WI ++VDPA R+IS G+  +    F N     P+  + 
Sbjct: 34  RRHAATPYSRP--TQNQVQRRPWISRIVDPAYRIISGGATRILPYFFSNAASA-PALAAP 93

Query: 88  PES-------IQSRRDDKKADVT------DPFEVQVAA----ANVGDN------QNRA-- 147
           PE        +Q+   D    VT      +P  ++V      ANV +       Q R   
Sbjct: 94  PEDQNQHQGELQNNPQDNDPSVTPISNKPEPASIEVGGPSGTANVNEGNFSISAQRRGKA 153

Query: 148 ---DRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKR----------VKF 207
              D   + ELE+ M+ KTF+++EID L  ++ S+ +DLPDV  ++R           K 
Sbjct: 154 ALNDDVAISELERLMEGKTFSQAEIDRLIEMISSRAIDLPDVKRDERNLEIPLREGAKKN 213

Query: 208 ISSIPESNRNEFKKISNSEVRMRRQSFPTPFLSSSVLDEDI------SSPAEIARAYM 222
           +S   ++      K +NSE+     + PTP   S +LD D        SPAE+A+AYM
Sbjct: 214 MSLFDKAKEPIGGKDANSEI----WATPTPLAKSIILDGDKIRDEVGLSPAELAKAYM 264

[Close]
BLAST of CmaCh04G014510 vs. NCBI nr
Match: gi|659091777|ref|XP_008446727.1| (PREDICTED: cell wall protein AWA1 [Cucumis melo])

HSP 1 Score: 1220.7 bits (3157), Expect = 0.0e+00
Identity = 735/1107 (66.40%), Postives = 824/1107 (74.44%), Query Frame = 1 

Query: 1    MATAREQKS------GEEEGLRTAGKFADKKFFRKPPKKPYDRPPTTLRTSGNNSWILKL 60
            M TAR+QK+       EEE L T GKF D++F +K P KPYDRPP  +RT+GNNSWILKL
Sbjct: 1    MVTARQQKNPEEKEEDEEERLGTVGKFIDERFVKKSPAKPYDRPPNGIRTTGNNSWILKL 60

Query: 61   VDPAQRLISSGSQMLFSSVFRNFPHRLPSCISSPESIQSRRDDKKADVTDPFEVQVAAAN 120
            VDPAQRLISSGS+MLFSSV RNFP  L S +SS ES QSR+DDKKADVT PFEVQVA  N
Sbjct: 61   VDPAQRLISSGSRMLFSSVIRNFPTHLTSRVSSQESSQSRKDDKKADVTGPFEVQVAF-N 120

Query: 121  VGDNQNRA-DRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSI 180
            VGDN++R+ D+F+M+ELEK +KQKTF+RSEIDHLT L+HS+N DLP VNEEK  KFISSI
Sbjct: 121  VGDNRSRSSDQFLMMELEKTLKQKTFSRSEIDHLTTLLHSRNGDLPGVNEEKSFKFISSI 180

Query: 181  PESNRNEFKKISNSEVRMRRQSFPTPFLSSSVLDEDISSPAEIARAYMVSRQPKLCPSMP 240
            PE NR EF KI NSEVRM R S   P L SSVLD DISSPAE+ARAYM SR+ K+CPS  
Sbjct: 181  PEPNRKEFVKIPNSEVRMGRPSISPPILCSSVLDGDISSPAEVARAYMGSRESKVCPSKR 240

Query: 241  SLRAQGLGENSAGPTSTSFSSKSIDMLLVPSSTSQGLKRRSSFFDNHIGPNVPLRRIRQK 300
            SLRAQGLGENS   TS SF SKS +MLL P S S+G KRRSSF DNHI   V LRRIRQK
Sbjct: 241  SLRAQGLGENSTNSTSLSFYSKSNNMLLAPPSISRGSKRRSSFLDNHIKSIVSLRRIRQK 300

Query: 301  PNIHLSKGLSLPVSTRPISGPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSLKPKKNSAR 360
            PNIHLSKGLSLP+S      PV  LSFDASQSSKFG+  NFPS IWNSQLS KP K  AR
Sbjct: 301  PNIHLSKGLSLPISV-----PVVGLSFDASQSSKFGRTRNFPSCIWNSQLSPKPNKTFAR 360

Query: 361  KFIMNVESDDIRGAGSSSIYTPSRSYKMASKILEQLDKLTPPKEKV---KRLPVGEISPP 420
            KFI NV SD+I GA  SSIYT +RS KMASKILEQL+KLTPPKEKV    RLPVGE    
Sbjct: 361  KFITNVGSDNILGASCSSIYTLTRSSKMASKILEQLEKLTPPKEKVSTFNRLPVGEKYHS 420

Query: 421  KLSPFTVDGHLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPS 480
            KLSP  V GHLK VKDVDLPR+EE V+D+KQS SL G+ Y  N+EN+ Q+KE+LE +K S
Sbjct: 421  KLSPPEVVGHLKSVKDVDLPRNEEFVYDDKQSNSLLGISYQGNRENSFQHKERLEKLKSS 480

Query: 481  DPHHRCALLKDSGSIGSSKDSMIDLGVPAPAVVKSTIQPPKNKLAFLMWPDKDRVDHDES 540
            DPH    LLKDSGSIGS+ DSM D G+P  AV KSTIQPPK+K AF M PD+D VD DES
Sbjct: 481  DPHPSRDLLKDSGSIGSTNDSMNDQGMPESAVGKSTIQPPKDKQAFPMLPDEDSVDQDES 540

Query: 541  SPDRVAPATAEDREGDISLAVRQTTASESLAPSKPQTASEVIVGSPLNRSSDLKTSEGSV 600
            S DRVAPATAE REGD+SLAVRQTTA+ES++P++ Q +SEVIVGS L+ SSD +T   S+
Sbjct: 541  SADRVAPATAEVREGDVSLAVRQTTANESVSPARLQKSSEVIVGSSLDGSSDSETFGDSI 600

Query: 601  HDDMDTSFTFQIA----PSQPETIDSAPTNSFGNNDLPENKRIDSPVFSFGNNVSPRKQP 660
             DD+DT  T QIA     SQPE ID     SFGN  LPENK+I SPVFSF NNVSPRKQ 
Sbjct: 601  DDDIDTRLTVQIASSLRTSQPEAID-----SFGNKILPENKQIVSPVFSFVNNVSPRKQL 660

Query: 661  NASSTAFDFGNKDASRTELCAASENGNGASFPYTQWNPASSCSDVQGSVYLNAVASSNHK 720
             ASSTA D GNKD S TELCA  ENGN  S+PYTQ NP                ASSN K
Sbjct: 661  IASSTALDIGNKDDSLTELCADFENGNEPSYPYTQCNP----------------ASSNDK 720

Query: 721  LDCSWGTCNDAFSSSASISAGLAVSFCPTARYQSLNNGLSISCPSQYSSCSPLTPSMGQS 780
            LD SW TCNDAFSSS S+SAGLA SF  T  +QSLNNGLSISCPS YSS SP T  M QS
Sbjct: 721  LDFSWRTCNDAFSSSVSVSAGLAFSFSSTPGHQSLNNGLSISCPSLYSSYSPSTGFMNQS 780

Query: 781  SSRYIFLSAKCASNDANITTNDKHPSTTNVITSSAPSAMGLGTHEDKIKQDASLHIANNT 840
            SSR IFLSA CA N+ NI         T + +S A +  G G++ DKIK+D SL   N+T
Sbjct: 781  SSRNIFLSAPCAINNTNI--------ITTLASSFASTTSGTGSY-DKIKRDESLRNVNDT 840

Query: 841  YFSSISTPANSHYNMFSFNPGATPSFVNNHQLRTPTVSSAPELSAQGVSAGKEFTANAEQ 900
            YFSSI+TPANSHY+MFSF   ATPSFV N  L  PTVSSA  LSAQ VS GK+F ANAE+
Sbjct: 841  YFSSITTPANSHYSMFSFGSAATPSFVTN-LLSKPTVSSATGLSAQEVSVGKKFIANAER 900

Query: 901  TSIIMGSFMSHASSVMAGKASISSGISFGCSSPASELFHSGSRPSEFPITGFTCAQATST 960
            TS+I+GS MSH SS MAGKAS+  G+SF CSSPASE F+SGSRPSEFPIT FT A ATST
Sbjct: 901  TSMILGSSMSHVSSGMAGKASLCCGLSFECSSPASERFNSGSRPSEFPITAFTSAPATST 960

Query: 961  ----HFSTPRTHLGFESFTGASFSSICSTTSAAAMAGSSSKTVSSNSHHTVAFRVSTGNK 1020
                + ST  T LGFESFTGASFSS+  +TSAAA+A S+   V SNSH  VAF+VS+ N 
Sbjct: 961  ISTSNVSTSSTLLGFESFTGASFSSLRCSTSAAALADST--PVLSNSHPKVAFKVSSVNN 1020

Query: 1021 DCEDQGTYKDNVPLFSQKPVPPPSSGFSFSQATPESNPFLVGKQQTLAEPQNSSPYIAHS 1080
            +CE+QGT KDNVPLFSQKP     SG S S  T E   F VGKQQTLAEPQNS PYIA S
Sbjct: 1021 NCEEQGTSKDNVPLFSQKPKFSSGSGPSGSAGTSELTSFQVGKQQTLAEPQNSYPYIAAS 1068

Query: 1081 SSLEAR--GSFPLSAGGGNKANRRLVK 1088
            +SL+A+  GSF L+AGG +KANRR VK
Sbjct: 1081 NSLQAKSGGSFSLNAGGSDKANRRFVK 1068

[Close]
BLAST of CmaCh04G014510 vs. NCBI nr
Match: gi|778708690|ref|XP_011656263.1| (PREDICTED: nuclear pore complex protein NUP1 [Cucumis sativus])

HSP 1 Score: 1194.1 bits (3088), Expect = 0.0e+00
Identity = 727/1107 (65.67%), Postives = 812/1107 (73.35%), Query Frame = 1 

Query: 1    MATAREQKSGEEE---GLRTAGKFADKKFFRKPPKKPYDRPPTTLRTSGNNSWILKLVDP 60
            M TAR+QK+ EEE   GL    K  D++F +K P KPYDRPP  +RTSGNNSWILKLVDP
Sbjct: 1    MVTARQQKNLEEEDEEGLGRVRKLIDERFVKKSPPKPYDRPPDGIRTSGNNSWILKLVDP 60

Query: 61   AQRLISSGSQMLFSSVFRNFPHRLPSCISSPESIQSRRDDKKADVTDPFEVQVAAANVGD 120
             QRLISSGS+MLFSSV R FPH L S +SS ES QSR+DD K DVT PFEV+VA  NVGD
Sbjct: 61   GQRLISSGSRMLFSSVIRKFPHHLTSRVSSQESSQSRKDDNKVDVTAPFEVRVAT-NVGD 120

Query: 121  NQNRA-DRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIPES 180
            N++R+ D+F+M+ELEK +KQKTFTRSEI+HLT L+HS+N DLP V++EK  KFISSIPE 
Sbjct: 121  NRSRSSDQFLMMELEKTLKQKTFTRSEINHLTTLLHSRNGDLPVVHKEKSFKFISSIPEP 180

Query: 181  NRNEFKKISNSEVRMRRQSFPTPFLSSSVLDEDISSPAEIARAYMVSRQPKLCPSMPSLR 240
            NR EF KI NSEVRM R S  TP LSSSVLD DISSPAE+ARAYM SR+ K+CPSM SLR
Sbjct: 181  NRKEFVKIPNSEVRMGRPSISTPILSSSVLDGDISSPAEVARAYMGSRESKVCPSMRSLR 240

Query: 241  AQGLGENSAGPTSTSFSSKSIDMLLVPSSTSQGLKRRSSFFDNHIGPNVPLRRIRQKPNI 300
            AQGLG+NS   TS +      +MLL P S SQGLKRRSSF DNHI   V LR+IRQKPNI
Sbjct: 241  AQGLGKNSTDSTSLT------NMLLAPPSISQGLKRRSSFLDNHIRSIVSLRKIRQKPNI 300

Query: 301  HLSKGLSLPVSTRPISGPVDRLSFDASQSSKFGKVHNFPSSIWNSQLSLKPKKNSARKFI 360
            HLSKGLSLP+S RPIS PV  LSFDASQSSKFG+  NFPS IWNSQLS KP K  ARKFI
Sbjct: 301  HLSKGLSLPISARPISVPVVGLSFDASQSSKFGRTQNFPSCIWNSQLSTKPNKTFARKFI 360

Query: 361  MNVESDDIRGAGSSSIYTPSRSYKMASKILEQLDKLTPPKEKVKR---LPVGEISPPKLS 420
             NVESD+I GAGSSSIYT SRS KMASKILEQL+KLT PKEKV     LPV E   PKLS
Sbjct: 361  TNVESDNIPGAGSSSIYTLSRSSKMASKILEQLEKLTSPKEKVSTFNLLPVREKYHPKLS 420

Query: 421  PFTVDGHLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSDPH 480
            P  V GHLK VKDVDLPRD+      KQS SL G+ Y  N+ENT Q+KEKLE +K SDPH
Sbjct: 421  PAEVVGHLKSVKDVDLPRDD------KQSNSLLGISYQGNRENTFQHKEKLEKLKSSDPH 480

Query: 481  HRCALLKDSGSIGSSKDSMIDLGVPAPAVVKSTIQPPKNKLAFLMWPDKDRVDHDESSPD 540
                LLKD GS+GSSKDSM D G+P  AVVKSTIQPPK+K AF M PDKD V  DESS  
Sbjct: 481  PNRDLLKDYGSMGSSKDSMNDQGMPESAVVKSTIQPPKDKQAFPMLPDKDSVYQDESSAA 540

Query: 541  RVAPATAEDREGDISLAVRQTTASESLAPSKPQTASEVIVGSPLNRSSDLKTSEGSVHDD 600
            RVAPATAE REGD+SLAVRQTTA+ESL+P++ Q  SEVIVGS L  SSD +T   S+ DD
Sbjct: 541  RVAPATAEVREGDVSLAVRQTTANESLSPARIQKPSEVIVGSSLYGSSDSETFGDSIDDD 600

Query: 601  MDTSFTFQ----IAPSQPETIDSAPTNSFGNNDLPENKRIDSPVFSFGNNVSPRKQPNAS 660
            +DT  TFQ    +  SQPET D     SFGN +LPENK+I SPVFSF NNVSPRKQP AS
Sbjct: 601  IDTGLTFQNASSLCTSQPETND-----SFGNKNLPENKQIVSPVFSFVNNVSPRKQPIAS 660

Query: 661  STAFDFGNKDASRTELCAASENGNGASFPYTQWNPASSCSDVQGSVYLNAVASSNHKLDC 720
            S A D GNKD S TELCA SEN N  S+PYTQ NP                ASSN KLD 
Sbjct: 661  SAALDIGNKDDSLTELCADSENVNEPSYPYTQCNP----------------ASSNDKLDS 720

Query: 721  SWGTCNDAFSSSASISAGLAVSFCPTARYQSLNNGLSISCPSQYSSCSPLTPSMGQSSSR 780
            SW TCNDAFSSS S+SAGLA SF      QS N+GLSISCPS YSS SP T  M +SSSR
Sbjct: 721  SWRTCNDAFSSSVSLSAGLAFSFSSNPGNQSPNDGLSISCPSLYSSYSPSTGFMNRSSSR 780

Query: 781  YIFLSAKCASNDANITTNDKHPSTTNVITSSAPSAMGLGTHEDKIKQDASLHIANNTYFS 840
             IFLSA  A N+ANI         T + +  +P+  G G++ED+IKQDASL   N+TYFS
Sbjct: 781  NIFLSAPYAINNANI--------ITTMASLFSPTTSGAGSYEDEIKQDASLRNVNDTYFS 840

Query: 841  SISTPANSHYNMFSFNPGATPSFVNNHQLRTPTVSSAPELSAQGVSAGKEFTANAEQTSI 900
            SI+TPANSHY+MFSF   ATPSFV N  L  PTVSSA ELSA  VS  KEF ANAE+TS+
Sbjct: 841  SITTPANSHYSMFSFGSAATPSFVTN-LLSKPTVSSATELSAPDVSVEKEFIANAEKTSM 900

Query: 901  IMGSFMSHASSVMAGKASISSGISFGCSSPASELFHSGSRPSEFPITGFTCAQATST--- 960
            I+ S  SH SS MAGKAS+  G+SFGCSSPASE F+SG+RPSEFPITGFT A ATST   
Sbjct: 901  ILESSTSHVSSGMAGKASVCCGLSFGCSSPASEQFNSGNRPSEFPITGFTSAHATSTIST 960

Query: 961  -HFSTPRTHLGFESFTGASFSSICSTTSAAAMAGSSSKTVSSNSHHTVAFRVSTGNKDCE 1020
             + ST  T L FESFTGASFSSI  TTSAAA+A S+   V SNS+  VAF VS+ N DCE
Sbjct: 961  SNVSTSSTLLEFESFTGASFSSIRCTTSAAALANST--PVLSNSYPKVAFSVSSVNNDCE 1020

Query: 1021 DQGTYKDNVPLFSQKPVPPPSSGFSFSQATPESNPFLVGK---QQTLAEPQNSSPYIAHS 1080
            +QGT KDNVPLFSQKP       FSF   T E   F VGK   QQTLAEPQNS PY+A S
Sbjct: 1021 EQGTSKDNVPLFSQKP------KFSFGSGTSELTLFQVGKLENQQTLAEPQNSYPYMAAS 1056

Query: 1081 SSLEAR--GSFPLSAGGGNKANRRLVK 1088
            +SLEA+  GSF L+AGG +KANRR VK
Sbjct: 1081 NSLEAKAGGSFSLNAGGSDKANRRSVK 1056

[Close]
BLAST of CmaCh04G014510 vs. NCBI nr
Match: gi|700196989|gb|KGN52166.1| (hypothetical protein Csa_5G613440 [Cucumis sativus])

HSP 1 Score: 1021.1 bits (2639), Expect = 1.4e-294
Identity = 637/1000 (63.70%), Postives = 708/1000 (70.80%), Query Frame = 1 

Query: 128  VELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDVNEEKRVKFISSIPESNRNEFKKISNS 187
            +ELEK +KQKTFTRSEI+HLT L+HS+N DLP V++EK  KFISSIPE NR EF KI NS
Sbjct: 1    MELEKTLKQKTFTRSEINHLTTLLHSRNGDLPVVHKEKSFKFISSIPEPNRKEFVKIPNS 60

Query: 188  EVRMRRQSFPTPFLSSSVLDEDISSPAEIARAYMVSRQPKLCPSMPSLRAQGLGENSAGP 247
            EVRM R S  TP LSSSVLD DISSPAE+ARAYM SR+ K+CPSM SLRAQGLG+NS   
Sbjct: 61   EVRMGRPSISTPILSSSVLDGDISSPAEVARAYMGSRESKVCPSMRSLRAQGLGKNSTDS 120

Query: 248  TSTS---FSSKSIDMLLVPS---------------------STSQGLKRRSSFFDNHIGP 307
            TS +    +  SI   +  S                         GLKRRSSF DNHI  
Sbjct: 121  TSLTNMLLAPPSISQFIQHSLARFYETPSVFSWSGFRVEITDNENGLKRRSSFLDNHIRS 180

Query: 308  NVPLRRIRQKPNIHLSKGLSLPVSTRPISGPVDRLSFDASQSSKFGKVHNFPSSIWNSQL 367
             V LR+IRQKPNIHLSKGLSLP+S RPIS PV  LSFDASQSSKFG+  NFPS IWNSQL
Sbjct: 181  IVSLRKIRQKPNIHLSKGLSLPISARPISVPVVGLSFDASQSSKFGRTQNFPSCIWNSQL 240

Query: 368  SLKPKKNSARKFIMNVESDDIRGAGSSSIYTPSRSYKMASKILEQLDKLTPPKEKVKR-- 427
            S KP K  ARKFI NVESD+I GAGSSSIYT SRS KMASKILEQL+KLT PKEKV    
Sbjct: 241  STKPNKTFARKFITNVESDNIPGAGSSSIYTLSRSSKMASKILEQLEKLTSPKEKVSTFN 300

Query: 428  -LPVGEISPPKLSPFTVDGHLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQN 487
             LPV E   PKLSP  V GHLK VKDVDLPRD+      KQS SL G+ Y  N+ENT Q+
Sbjct: 301  LLPVREKYHPKLSPAEVVGHLKSVKDVDLPRDD------KQSNSLLGISYQGNRENTFQH 360

Query: 488  KEKLENMKPSDPHHRCALLKDSGSIGSSKDSMIDLGVPAPAVVKSTIQPPKNKLAFLMWP 547
            KEKLE +K SDPH    LLKD GS+GSSKDSM D G+P  AVVKSTIQPPK+K AF M P
Sbjct: 361  KEKLEKLKSSDPHPNRDLLKDYGSMGSSKDSMNDQGMPESAVVKSTIQPPKDKQAFPMLP 420

Query: 548  DKDRVDHDESSPDRVAPATAEDREGDISLAVRQTTASESLAPSKPQTASEVIVGSPLNRS 607
            DKD V  DESS  RVAPATAE REGD+SLAVRQTTA+ESL+P++ Q  SEVIVGS L  S
Sbjct: 421  DKDSVYQDESSAARVAPATAEVREGDVSLAVRQTTANESLSPARIQKPSEVIVGSSLYGS 480

Query: 608  SDLKTSEGSVHDDMDTSFTFQ----IAPSQPETIDSAPTNSFGNNDLPENKRIDSPVFSF 667
            SD +T   S+ DD+DT  TFQ    +  SQPET D     SFGN +LPENK+I SPVFSF
Sbjct: 481  SDSETFGDSIDDDIDTGLTFQNASSLCTSQPETND-----SFGNKNLPENKQIVSPVFSF 540

Query: 668  GNNVSPRKQPNASSTAFDFGNKDASRTELCAASENGNGASFPYTQWNPASSCSDVQGSVY 727
             NNVSPRKQP ASS A D GNKD S TELCA SEN N  S+PYTQ NP            
Sbjct: 541  VNNVSPRKQPIASSAALDIGNKDDSLTELCADSENVNEPSYPYTQCNP------------ 600

Query: 728  LNAVASSNHKLDCSWGTCNDAFSSSASISAGLAVSFCPTARYQSLNNGLSISCPSQYSSC 787
                ASSN KLD SW TCNDAFSSS S+SAGLA SF      QS N+GLSISCPS YSS 
Sbjct: 601  ----ASSNDKLDSSWRTCNDAFSSSVSLSAGLAFSFSSNPGNQSPNDGLSISCPSLYSSY 660

Query: 788  SPLTPSMGQSSSRYIFLSAKCASNDANITTNDKHPSTTNVITSSAPSAMGLGTHEDKIKQ 847
            SP T  M +SSSR IFLSA  A N+ANI         T + +  +P+  G G++ED+IKQ
Sbjct: 661  SPSTGFMNRSSSRNIFLSAPYAINNANI--------ITTMASLFSPTTSGAGSYEDEIKQ 720

Query: 848  DASLHIANNTYFSSISTPANSHYNMFSFNPGATPSFVNNHQLRTPTVSSAPELSAQGVSA 907
            DASL   N+TYFSSI+TPANSHY+MFSF   ATPSFV N  L  PTVSSA ELSA  VS 
Sbjct: 721  DASLRNVNDTYFSSITTPANSHYSMFSFGSAATPSFVTN-LLSKPTVSSATELSAPDVSV 780

Query: 908  GKEFTANAEQTSIIMGSFMSHASSVMAGKASISSGISFGCSSPASELFHSGSRPSEFPIT 967
             KEF ANAE+TS+I+ S  SH SS MAGKAS+  G+SFGCSSPASE F+SG+RPSEFPIT
Sbjct: 781  EKEFIANAEKTSMILESSTSHVSSGMAGKASVCCGLSFGCSSPASEQFNSGNRPSEFPIT 840

Query: 968  GFTCAQATST----HFSTPRTHLGFESFTGASFSSICSTTSAAAMAGSSSKTVSSNSHHT 1027
            GFT A ATST    + ST  T L FESFTGASFSSI  TTSAAA+A S+   V SNS+  
Sbjct: 841  GFTSAHATSTISTSNVSTSSTLLEFESFTGASFSSIRCTTSAAALANST--PVLSNSYPK 900

Query: 1028 VAFRVSTGNKDCEDQGTYKDNVPLFSQKPVPPPSSGFSFSQATPESNPFLVGK---QQTL 1087
            VAF VS+ N DCE+QGT KDNVPLFSQKP       FSF   T E   F VGK   QQTL
Sbjct: 901  VAFSVSSVNNDCEEQGTSKDNVPLFSQKP------KFSFGSGTSELTLFQVGKLENQQTL 956

[Close]
BLAST of CmaCh04G014510 vs. NCBI nr
Match: gi|743868172|ref|XP_011032928.1| (PREDICTED: nuclear pore complex protein NUP1-like isoform X2 [Populus euphratica])

HSP 1 Score: 198.4 bits (503), Expect = 6.9e-47
Identity = 312/1116 (27.96%), Postives = 466/1116 (41.76%), Query Frame = 1 

Query: 1    MATAREQKSGEE--EGLRTAGKFADKKFFRKPPKKPYDRPPTTLRTSG--NNSWILKLVD 60
            MATA  ++S E   E     GKF  + F R     PYDRP T +R  G  +N W+ KLVD
Sbjct: 1    MATAAGRESNERLYEDRGGYGKFRKRPFRRSTQATPYDRPSTAIRNPGGISNGWLSKLVD 60

Query: 61   PAQRLISSGSQMLFSSVFRNFPHRLPSC-ISSPESIQSRRDDKKADV------------- 120
            PAQRLI+S +  LF+SVFRN   RLP+  + +P S Q    +++ DV             
Sbjct: 61   PAQRLIASSAHRLFASVFRN---RLPAPPVVTPRS-QPPETERETDVNPGALDKPKGMSS 120

Query: 121  TDPFEVQVAAANVGDNQ-NRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDV 180
            TD  EV   A N      N  DR  + ELE  +KQKTFTRSEID LTAL+ S+  D P  
Sbjct: 121  TDCLEVHREAINASSGLINSLDRGGVTELELILKQKTFTRSEIDRLTALLQSRTADFPTG 180

Query: 181  NEEKRVKFISS---IPESNRNEFKKISNSEVRMRRQSFPTPFLSSSVLDEDISSPAEIAR 240
            NEEK+ + ISS   + E  +        +    R  S  TP + SSVL+ED +SP E+A+
Sbjct: 181  NEEKKPEVISSRAMVSEGKKELLTVPITNGFESRINS--TPIVGSSVLNEDAASPTELAK 240

Query: 241  AYMVSRQPKLCPSMPSLRAQGLGENSAGPTSTSFSSKSIDMLLVPSST-----------S 300
            AYM SR  K+ PSM   R Q   +NS    + +F+ KS  M L P S+           +
Sbjct: 241  AYMGSRPSKVSPSMLESRCQPFRDNSRALINPTFTPKSPMMSLTPRSSGCPGVPENYFVT 300

Query: 301  QGLKRRSSFFDNHIGPNVPLRRIRQKPNIHLSKGLSLPVSTRPISGPVDRLSFDASQSSK 360
               + RS+ ++       P  R+R    +    G S      P     + L       SK
Sbjct: 301  PRSRGRSAIYNM---ARTPYSRVRASTGLQ-GAGTSSDAFAGPSFSSQNALESSRFSGSK 360

Query: 361  FGKVHNFPSSIWNSQLSLKPKKNSARKFIMNVESD--DIRGA------------------ 420
             G +    S + N   S+ P +   +K  +   S    IRGA                  
Sbjct: 361  QGALKRRSSVLDNDIGSVGPIRRIRQKSNLLPTSGTLSIRGAGIGSNAAQKLHSTEKPFL 420

Query: 421  --------------GSSSIYTPSRSYKMASKILEQLDKLTPPKEKVKRLPVGEISPPKLS 480
                          G+S    PS+S +MASKIL QLD L   +E+         SP KLS
Sbjct: 421  VGEPSKDNGDNNVHGTSFTPVPSKSSEMASKILHQLDVLVSSRER---------SPAKLS 480

Query: 481  PFTVDG-HLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSDP 540
            P  + G  L+ ++++D     E+ +D  +    H     D +E+ SQ ++K+E   P  P
Sbjct: 481  PSMLRGPALRSLENLDSSDFVEIDNDTNKLALKHDTLLPDARESVSQKQDKVEEKGPGKP 540

Query: 541  HHRC--ALLKDSG--SIGSSKDSMIDLGVPAPAVVKSTIQPP-KNKLAFLMWPDKD--RV 600
               C  + L  +G  +    K+ +  +   A  V+ +  Q P + K AF M   +D   +
Sbjct: 541  IAPCGKSALAGNGMDTTNLLKNDLAGVKTSAFPVMSTFAQAPVQKKRAFQMSAQEDFLEL 600

Query: 601  DHDESSPDRVAPATAEDRE-GDISLAVRQTTASESLAPSKPQTASEVIVGSPLNRSSDLK 660
            D D+S     +   AE RE GD  L  ++T+ +E++   K    SE  V SP + + + K
Sbjct: 601  DDDDSPNGTASGMLAEGREKGDTKLVEKKTSVAEAVVVEKSPVQSE--VNSPSSYTLNKK 660

Query: 661  TS--EGSVHDDMDTSFTFQIAPSQPETIDSAPTNSFGNND----LPENKRIDSPVFSFGN 720
             +  +GSV  +    F    AP    T   A  N   +      LP+       +FS   
Sbjct: 661  NAGVDGSVVVEKSIGFISPAAPLPTVTDKQAAVNKLESISDEVALPKYSNALPQIFSTAE 720

Query: 721  NVSPRKQPNASSTAFDFGNKDASRTELCAASENGNGASFPYTQWNPASSCSDVQGSVYLN 780
             V+  K+PN +S  F F NK   +    A     +  S P  Q    SS +  +GS Y  
Sbjct: 721  KVALPKEPNGTSQFFHFSNKTGDK---AAPLTLTSVMSDPSGQKLGVSSDAGPKGSSYTP 780

Query: 781  AVASSNH-----------------KLDCSWGTCNDAFSSSASISAGLAVSFCPTARYQSL 840
                +                   K+  S+ T  +  S+S S S G   SF  T+   SL
Sbjct: 781  IATGATEVVTRDPGLDKGDDKDSLKIGNSFRTAENVPSTSIS-SNGSLFSFGITSNSSSL 840

Query: 841  NNGLSISCPSQYSSCSPLTPSMGQSSSRYIFLSAKCASNDANITTNDKHPSTTNVITSSA 900
            NNG   S           TPS   S S  +F S       ++  +N    S+TN  T++ 
Sbjct: 841  NNGFLAS----------TTPSSFSSPSLPLFSSNLTGQKSSSFPSNSVASSSTNATTTAF 900

Query: 901  PSAMGLGTHEDKIKQDASLHIANNTYFSSISTPANSHYNMFSFNPGATPSFVNNHQLRTP 960
             +A   G              +N +  +S S P  +  ++F+F   ++ S +    + T 
Sbjct: 901  TAANTNGN-------------SNFSVSASASEPTLTAASIFTFGTVSSNSVLTVPSISTE 960

Query: 961  TVSSAPELSAQGVSAGKEFTANAEQTSIIMG-SFMSHASSVMAGKASISSGIS---FGCS 1002
            T     + ++   S+       +   SI  G S +++A + + G  +  +G     FG +
Sbjct: 961  TTEVKTKETSFSASSSTSSATTSTTGSIFGGTSAITNAGNNIFGDTTAVTGKENSVFGGT 1020

[Close]
BLAST of CmaCh04G014510 vs. NCBI nr
Match: gi|743868168|ref|XP_011032927.1| (PREDICTED: nuclear pore complex protein NUP1-like isoform X1 [Populus euphratica])

HSP 1 Score: 198.4 bits (503), Expect = 6.9e-47
Identity = 312/1116 (27.96%), Postives = 466/1116 (41.76%), Query Frame = 1 

Query: 1    MATAREQKSGEE--EGLRTAGKFADKKFFRKPPKKPYDRPPTTLRTSG--NNSWILKLVD 60
            MATA  ++S E   E     GKF  + F R     PYDRP T +R  G  +N W+ KLVD
Sbjct: 1    MATAAGRESNERLYEDRGGYGKFRKRPFRRSTQATPYDRPSTAIRNPGGISNGWLSKLVD 60

Query: 61   PAQRLISSGSQMLFSSVFRNFPHRLPSC-ISSPESIQSRRDDKKADV------------- 120
            PAQRLI+S +  LF+SVFRN   RLP+  + +P S Q    +++ DV             
Sbjct: 61   PAQRLIASSAHRLFASVFRN---RLPAPPVVTPRS-QPPETERETDVNPGALDKPKGMSS 120

Query: 121  TDPFEVQVAAANVGDNQ-NRADRFVMVELEKAMKQKTFTRSEIDHLTALMHSKNVDLPDV 180
            TD  EV   A N      N  DR  + ELE  +KQKTFTRSEID LTAL+ S+  D P  
Sbjct: 121  TDCLEVHREAINASSGLINSLDRGGVTELELILKQKTFTRSEIDRLTALLQSRTADFPTG 180

Query: 181  NEEKRVKFISS---IPESNRNEFKKISNSEVRMRRQSFPTPFLSSSVLDEDISSPAEIAR 240
            NEEK+ + ISS   + E  +        +    R  S  TP + SSVL+ED +SP E+A+
Sbjct: 181  NEEKKPEVISSRAMVSEGKKELLTVPITNGFESRINS--TPIVGSSVLNEDAASPTELAK 240

Query: 241  AYMVSRQPKLCPSMPSLRAQGLGENSAGPTSTSFSSKSIDMLLVPSST-----------S 300
            AYM SR  K+ PSM   R Q   +NS    + +F+ KS  M L P S+           +
Sbjct: 241  AYMGSRPSKVSPSMLESRCQPFRDNSRALINPTFTPKSPMMSLTPRSSGCPGVPENYFVT 300

Query: 301  QGLKRRSSFFDNHIGPNVPLRRIRQKPNIHLSKGLSLPVSTRPISGPVDRLSFDASQSSK 360
               + RS+ ++       P  R+R    +    G S      P     + L       SK
Sbjct: 301  PRSRGRSAIYNM---ARTPYSRVRASTGLQ-GAGTSSDAFAGPSFSSQNALESSRFSGSK 360

Query: 361  FGKVHNFPSSIWNSQLSLKPKKNSARKFIMNVESD--DIRGA------------------ 420
             G +    S + N   S+ P +   +K  +   S    IRGA                  
Sbjct: 361  QGALKRRSSVLDNDIGSVGPIRRIRQKSNLLPTSGTLSIRGAGIGSNAAQKLHSTEKPFL 420

Query: 421  --------------GSSSIYTPSRSYKMASKILEQLDKLTPPKEKVKRLPVGEISPPKLS 480
                          G+S    PS+S +MASKIL QLD L   +E+         SP KLS
Sbjct: 421  VGEPSKDNGDNNVHGTSFTPVPSKSSEMASKILHQLDVLVSSRER---------SPAKLS 480

Query: 481  PFTVDG-HLKIVKDVDLPRDEELVHDNKQSISLHGVPYHDNQENTSQNKEKLENMKPSDP 540
            P  + G  L+ ++++D     E+ +D  +    H     D +E+ SQ ++K+E   P  P
Sbjct: 481  PSMLRGPALRSLENLDSSDFVEIDNDTNKLALKHDTLLPDARESVSQKQDKVEEKGPGKP 540

Query: 541  HHRC--ALLKDSG--SIGSSKDSMIDLGVPAPAVVKSTIQPP-KNKLAFLMWPDKD--RV 600
               C  + L  +G  +    K+ +  +   A  V+ +  Q P + K AF M   +D   +
Sbjct: 541  IAPCGKSALAGNGMDTTNLLKNDLAGVKTSAFPVMSTFAQAPVQKKRAFQMSAQEDFLEL 600

Query: 601  DHDESSPDRVAPATAEDRE-GDISLAVRQTTASESLAPSKPQTASEVIVGSPLNRSSDLK 660
            D D+S     +   AE RE GD  L  ++T+ +E++   K    SE  V SP + + + K
Sbjct: 601  DDDDSPNGTASGMLAEGREKGDTKLVEKKTSVAEAVVVEKSPVQSE--VNSPSSYTLNKK 660

Query: 661  TS--EGSVHDDMDTSFTFQIAPSQPETIDSAPTNSFGNND----LPENKRIDSPVFSFGN 720
             +  +GSV  +    F    AP    T   A  N   +      LP+       +FS   
Sbjct: 661  NAGVDGSVVVEKSIGFISPAAPLPTVTDKQAAVNKLESISDEVALPKYSNALPQIFSTAE 720

Query: 721  NVSPRKQPNASSTAFDFGNKDASRTELCAASENGNGASFPYTQWNPASSCSDVQGSVYLN 780
             V+  K+PN +S  F F NK   +    A     +  S P  Q    SS +  +GS Y  
Sbjct: 721  KVALPKEPNGTSQFFHFSNKTGDK---AAPLTLTSVMSDPSGQKLGVSSDAGPKGSSYTP 780

Query: 781  AVASSNH-----------------KLDCSWGTCNDAFSSSASISAGLAVSFCPTARYQSL 840
                +                   K+  S+ T  +  S+S S S G   SF  T+   SL
Sbjct: 781  IATGATEVVTRDPGLDKGDDKDSLKIGNSFRTAENVPSTSIS-SNGSLFSFGITSNSSSL 840

Query: 841  NNGLSISCPSQYSSCSPLTPSMGQSSSRYIFLSAKCASNDANITTNDKHPSTTNVITSSA 900
            NNG   S           TPS   S S  +F S       ++  +N    S+TN  T++ 
Sbjct: 841  NNGFLAS----------TTPSSFSSPSLPLFSSNLTGQKSSSFPSNSVASSSTNATTTAF 900

Query: 901  PSAMGLGTHEDKIKQDASLHIANNTYFSSISTPANSHYNMFSFNPGATPSFVNNHQLRTP 960
             +A   G              +N +  +S S P  +  ++F+F   ++ S +    + T 
Sbjct: 901  TAANTNGN-------------SNFSVSASASEPTLTAASIFTFGTVSSNSVLTVPSISTE 960

Query: 961  TVSSAPELSAQGVSAGKEFTANAEQTSIIMG-SFMSHASSVMAGKASISSGIS---FGCS 1002
            T     + ++   S+       +   SI  G S +++A + + G  +  +G     FG +
Sbjct: 961  TTEVKTKETSFSASSSTSSATTSTTGSIFGGTSAITNAGNNIFGDTTAVTGKENSVFGGT 1020

The following BLAST results are available for this feature:
BLAST of CmaCh04G014510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NUP1_ARATH1.3e-2436.00Nuclear pore complex protein NUP1 OS=Arabidopsis thaliana GN=NUP1 PE=1 SV=1[more]
BLAST of CmaCh04G014510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWL0_CUCSA1.0e-29463.70Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613440 PE=4 SV=1[more]
A0A0D2V745_GOSRA3.1e-3839.42Uncharacterized protein OS=Gossypium raimondii GN=B456_012G022500 PE=4 SV=1[more]
A0A0D2TS21_GOSRA3.1e-3839.42Uncharacterized protein OS=Gossypium raimondii GN=B456_012G022500 PE=4 SV=1[more]
A0A0D2S5E8_GOSRA4.1e-3833.08Uncharacterized protein OS=Gossypium raimondii GN=B456_012G022500 PE=4 SV=1[more]
A0A0D2V8C4_GOSRA4.1e-3833.08Uncharacterized protein OS=Gossypium raimondii GN=B456_012G022500 PE=4 SV=1[more]
BLAST of CmaCh04G014510 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G10650.17.2e-2636.00 BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAI... [more]
AT5G20200.12.0e-1230.25 nucleoporin-related[more]
BLAST of CmaCh04G014510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659091777|ref|XP_008446727.1|0.0e+0066.40PREDICTED: cell wall protein AWA1 [Cucumis melo][more]
gi|778708690|ref|XP_011656263.1|0.0e+0065.67PREDICTED: nuclear pore complex protein NUP1 [Cucumis sativus][more]
gi|700196989|gb|KGN52166.1|1.4e-29463.70hypothetical protein Csa_5G613440 [Cucumis sativus][more]
gi|743868172|ref|XP_011032928.1|6.9e-4727.96PREDICTED: nuclear pore complex protein NUP1-like isoform X2 [Populus euphratica... [more]
gi|743868168|ref|XP_011032927.1|6.9e-4727.96PREDICTED: nuclear pore complex protein NUP1-like isoform X1 [Populus euphratica... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G014510.1CmaCh04G014510.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33416FAMILY NOT NAMEDcoord: 1..661
score: 3.9E-64coord: 726..989
score: 3.9
NoneNo IPR availablePANTHERPTHR33416:SF2SUBFAMILY NOT NAMEDcoord: 726..989
score: 3.9E-64coord: 1..661
score: 3.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G014510Cucsa.282820Cucumber (Gy14) v1cgycmaB0801
CmaCh04G014510Cla020470Watermelon (97103) v1cmawmB699
CmaCh04G014510Cla013677Watermelon (97103) v1cmawmB667
CmaCh04G014510Csa5G613430Cucumber (Chinese Long) v2cmacuB748
CmaCh04G014510MELO3C012328Melon (DHL92) v3.5.1cmameB640
CmaCh04G014510ClCG05G022010Watermelon (Charleston Gray)cmawcgB655
CmaCh04G014510ClCG08G008450Watermelon (Charleston Gray)cmawcgB679
CmaCh04G014510CSPI05G26080Wild cucumber (PI 183967)cmacpiB755
CmaCh04G014510CmoCh04G026210Cucurbita moschata (Rifu)cmacmoB740
CmaCh04G014510CmoCh04G015230Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G014510Lsi08G006290Bottle gourd (USVL1VR-Ls)cmalsiB706
CmaCh04G014510Lsi04G001720Bottle gourd (USVL1VR-Ls)cmalsiB669
CmaCh04G014510Cp4.1LG01g25040Cucurbita pepo (Zucchini)cmacpeB734
CmaCh04G014510Cp4.1LG01g14160Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G014510MELO3C012328.2Melon (DHL92) v3.6.1cmamedB726
CmaCh04G014510CsaV3_5G035150Cucumber (Chinese Long) v3cmacucB0885
CmaCh04G014510Cla97C05G103730Watermelon (97103) v2cmawmbB758
CmaCh04G014510Bhi07G000613Wax gourdcmawgoB0903
CmaCh04G014510CsGy5G025550Cucumber (Gy14) v2cgybcmaB672
CmaCh04G014510Carg01889Silver-seed gourdcarcmaB1170
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G014510CmaCh04G025040Cucurbita maxima (Rimu)cmacmaB536
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G014510Silver-seed gourdcarcmaB1457
CmaCh04G014510Cucurbita maxima (Rimu)cmacmaB402
CmaCh04G014510Cucurbita moschata (Rifu)cmacmoB706
CmaCh04G014510Cucurbita pepo (Zucchini)cmacpeB700