CmaCh04G013740 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G013740
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCalcium-dependent lipid-binding (CaLB domain) family protein
LocationCma_Chr04 : 7044060 .. 7045869 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTACTCCTTTCAGAGAAGAAAGCATGAAATATCTTGAAAACTCAATCAGTGAGGTGAAGAGTGAAGGCAGAAGCAACGGTCAGCCGGAGAATCAGATATCGGATGGAGCAGGTGTATTATCTGTGACGGTCCAGGGAGCTTAAGATATCGAAGGGGAGAAGCACAATAATCCTTACGCTGTTATACACTTCAGAGGAGAGAGGAAGAAAACGAAGGTGATCTTTCAATTTTATGATATCTATCGATTGTTCTTCGATCTATCTGTTGTTGATTTTCTTCTATTTGATTTTGTTTTTGTAGATGATCAAGAAAACTCGCGACCCCTCATGGAATGAAGAATTCCCATTTATGCTAGAGGAACCTCCCATTCGAGAAAAGATCCATATTGAAGTTATGAGCAAACGGAATGTCTTAAGTTTTCTGCAAAAGGTATTGTCCCAAATAGACTCCTGGCACGAAGTTAAACTAAAAAATGACACCTTTTCAAGTACTAAGAACCAAAAAAAACACAAGCCACAGTTATATTTTGGCTTTCATTTCTAAAAATATTTCAAAGTGTCATTAAAAAAAAGTATATTTAAAACTCATAATTGGTCAATTCGGGATGAATTATTTTAGAGACCATCATAAGTTAATTCATTTTTATGAAGTTTGACTGGATCGTTGAGCTTAAATATGATCAAGAATAACCCATTATTGAAATTAATACAGGAATCATTGGGACACGTGGAAATCAATCTCGACGATGTTGTAAACAACGGGAGGACAAATGAGAAGTACAATCTGATCAACTCAAAGAACGGAAAGATTCACGTAGAAATGATATAGACAATGGCTTAAGAATTGAGTGATACAAATTTGTATGTACAGAGTGTGACGTCTGGCGCTTATAGAATCATTTATCAGCAAAGAAAAAAATAAAATAAATTTTGAAATAAAATAAAATTTGTAACTCATCTTTCCAATCAATTATAATTCAAGAAATTGCAAAATGGCTTGTTTGTTAAAAGGGGAAAAAAAAATCTTGTAATTGTTGGTTAATATATATATATAGATATCAAGTGCATCTTTATTGCCTATAGCTCAATTTAGTTTACTAATTTTAAATTTGTGCCTATTTTACTCTAATAACACTTTAAACTTTTAATAGGTCATCTAATATACTACAAAATTCAATTTTACTGATCTAAGAGGTCACAGCAATATGGAGAGAAAAAATAAGCATAAAAAGTTTCAAAAGGTTGAAACAAAACTCAAAAAGGGAACATTCTGCTCATTTGATTTATCGGCATAATCTTCAAAAGGAATTACAAGTGAGGAAACAAAATACCTTAACAGGTGTTGTGTGCAACTTTTGGAGGGCTAAATTTCAGGATGTTCGATCAGTGGGCTTTGGAATTCTCTTGTATTCATAGTTGTTGATGTCTACCTTCTCTTGTAAAGCCTGAACACATCAATAACACAATCAGGCGCTGTATATGATGGTGAAACTGAACATCATAACAAATGAGTTGCAATGAATAAGAGTAATACCCTCAGTTCTTCTTCTAACGATATATTTTTCGGCTTATACGCGTCAATGGGTCCCGTTCTTGATAGGGCTTTTCTCATCTCAGTGATCTCCCATTCTTGATCATCTTTCACCTTTGCAATATCTTTACTGAACTACAATGCAAATTCGACACGTTTTTAAAAAGAATATCAAGTGGAAAATGATAATCTACATATATAAAGCAAACATGGAAGCATTACAACAAATATGATCTTGATAATATTTATACTGTTGCTGTGCAGATAGCTAATTAA

mRNA sequence

ATGTTTACTCCTTTCAGAGAAGAAAGCATGAAATATCTTGAAAACTCAATCAGTGAGGTGAAGAGTGAAGGCAGAAGCAACGGTCAGCCGGAGAATCAGATATCGGATGGAGCAGATATCGAAGGGGAGAAGCACAATAATCCTTACGCTGTTATACACTTCAGAGGAGAGAGGAAGAAAACGAAGATGATCAAGAAAACTCGCGACCCCTCATGGAATGAAGAATTCCCATTTATGCTAGAGGAACCTCCCATTCGAGAAAAGATCCATATTGAAGTTATGAGCAAACGGAATGTCTTAAGTTTTCTGCAAAAGGAATCATTGGGACACGTGGAAATCAATCTCGACGATGTTGTAAACAACGGGAGGACAAATGAGAAGTACAATCTGATCAACTCAAAGAACGGAAAGATTCACATAGCTAATTAA

Coding sequence (CDS)

ATGTTTACTCCTTTCAGAGAAGAAAGCATGAAATATCTTGAAAACTCAATCAGTGAGGTGAAGAGTGAAGGCAGAAGCAACGGTCAGCCGGAGAATCAGATATCGGATGGAGCAGATATCGAAGGGGAGAAGCACAATAATCCTTACGCTGTTATACACTTCAGAGGAGAGAGGAAGAAAACGAAGATGATCAAGAAAACTCGCGACCCCTCATGGAATGAAGAATTCCCATTTATGCTAGAGGAACCTCCCATTCGAGAAAAGATCCATATTGAAGTTATGAGCAAACGGAATGTCTTAAGTTTTCTGCAAAAGGAATCATTGGGACACGTGGAAATCAATCTCGACGATGTTGTAAACAACGGGAGGACAAATGAGAAGTACAATCTGATCAACTCAAAGAACGGAAAGATTCACATAGCTAATTAA

Protein sequence

MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGADIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHIAN
Homology
[Close]
BLAST of CmaCh04G013740 vs. Swiss-Prot
Match: SYT3_ARATH (Synaptotagmin-3 OS=Arabidopsis thaliana GN=SYT3 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 6.2e-38
Identity = 84/144 (58.33%), Postives = 102/144 (70.83%), Query Frame = 1 

Query: 2   FTPFREESMKYLENSISEVKSEG----RSNGQPENQISDGADIEGEK-HNNPYAVIHFRG 61
           + PFREES+K  + S  E  SE        G     +    D+EG+K H+NPYAV+ FRG
Sbjct: 390 YVPFREESIKRRKESREEKSSEDDDFLSQAGLLSVAVQSAKDVEGKKKHSNPYAVVLFRG 449

Query: 62  ERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLGHVEINLD 121
           E+KKTKM+KKTRDP WNEEF F LEEPP++E I +EVMSK     F  KE LGHV+INLD
Sbjct: 450 EKKKTKMLKKTRDPRWNEEFQFTLEEPPVKESIRVEVMSKGTGFHFRSKEELGHVDINLD 509

Query: 122 DVVNNGRTNEKYNLINSKNGKIHI 141
           DVV+NGR N+KY+LINS+NG IHI
Sbjct: 510 DVVDNGRINQKYHLINSRNGIIHI 533

[Close]
BLAST of CmaCh04G013740 vs. Swiss-Prot
Match: SYT1_ARATH (Synaptotagmin-1 OS=Arabidopsis thaliana GN=SYT1 PE=1 SV=2)

HSP 1 Score: 131.7 bits (330), Expect = 6.2e-30
Identity = 71/145 (48.97%), Postives = 97/145 (66.90%), Query Frame = 1 

Query: 1   MFTPFREESMK--YLENSISEVKSEGR--SNGQPENQISDGADIEGEKHNNPYAVIHFRG 60
           ++ PF EE M   + E    +   EG   + G     +    D+EG+ H NPY  I+F+G
Sbjct: 389 LYKPFTEEEMPKGFEETQAVQKAPEGTPAAGGMLVVIVHSAEDVEGKHHTNPYVRIYFKG 448

Query: 61  ERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQ-KESLGHVEINL 120
           E +KTK +KK RDP WNEEF FMLEEPP+REK+H+EV+S  + +  L  KE+LG+V+I +
Sbjct: 449 EERKTKHVKKNRDPRWNEEFTFMLEEPPVREKLHVEVLSTSSRIGLLHPKETLGYVDIPV 508

Query: 121 DDVVNNGRTNEKYNLINSKNGKIHI 141
            DVVNN R N+K++LI+SKNGKI I
Sbjct: 509 VDVVNNKRMNQKFHLIDSKNGKIQI 533

[Close]
BLAST of CmaCh04G013740 vs. Swiss-Prot
Match: SYT2_ARATH (Synaptotagmin-2 OS=Arabidopsis thaliana GN=SYT2 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.7e-24
Identity = 63/145 (43.45%), Postives = 91/145 (62.76%), Query Frame = 1 

Query: 2   FTPFREESMKYLENSISEVKSEGRSNGQPENQ------ISDGADIEGEKHNNPYAVIHFR 61
           + PF+++ +   EN       E    G P         + +  D+EG+ H NP   + FR
Sbjct: 388 YKPFKDDDIP--ENIDDPNAVEKAPEGTPSTGGLLVVIVHEAEDLEGKYHTNPSVRLLFR 447

Query: 62  GERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLGHVEINL 121
           GE +KTK +KK R+P W+E+F F L+EPPI +K+H+EV+S  + L    KE+LG+V INL
Sbjct: 448 GEERKTKRVKKNREPRWDEDFQFPLDEPPINDKLHVEVISSSSRL-IHPKETLGYVVINL 507

Query: 122 DDVVNNGRTNEKYNLINSKNGKIHI 141
            DVV+N R N+KY+LI+SKNG+I I
Sbjct: 508 GDVVSNRRINDKYHLIDSKNGRIQI 529

[Close]
BLAST of CmaCh04G013740 vs. TrEMBL
Match: B9T8I4_RICCO (Calcium lipid binding protein, putative OS=Ricinus communis GN=RCOM_0185810 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.5e-38
Identity = 88/144 (61.11%), Postives = 108/144 (75.00%), Query Frame = 1 

Query: 2   FTPFREESMKYLE----NSISEVKSEGRSNGQPENQISDGA-DIEGEKHNNPYAVIHFRG 61
           F PF+++S K+ E     S      E  S     + I  GA D+EGE H+NPYA++ FRG
Sbjct: 391 FVPFKQDSAKFTEPVDGGSEKSSDEEKLSGAGLLSVIVQGAEDVEGEHHSNPYALVLFRG 450

Query: 62  ERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLGHVEINLD 121
           E+KKTKMI+KTRDP WNEEF F L++PP+REK+HI+VMSKR   SFL KESLGHVEINLD
Sbjct: 451 EKKKTKMIRKTRDPHWNEEFQFTLDQPPLREKMHIDVMSKRTRFSFLSKESLGHVEINLD 510

Query: 122 DVVNNGRTNEKYNLINSKNGKIHI 141
           DVV+NGR NEKY+LINSK+G IH+
Sbjct: 511 DVVHNGRINEKYHLINSKHGLIHL 534

[Close]
BLAST of CmaCh04G013740 vs. TrEMBL
Match: A0A059BHE2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02846 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.3e-38
Identity = 87/150 (58.00%), Postives = 112/150 (74.67%), Query Frame = 1 

Query: 2   FTPFREESMKY---------LENSISEVKSEGRSNGQPE-NQISDGA-DIEGEKHNNPYA 61
           F PF+EES  +         +E+ I +V  +   +G    + I  GA D+EGE+HNNPYA
Sbjct: 389 FVPFKEESGSFKELPNGYGRIESGIDKVSDDSALSGAGLLSVIVQGAEDVEGERHNNPYA 448

Query: 62  VIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLGH 121
           ++ FRGE+KKTKM++KTRDP WNEEF FML+EPP+ +KIHI VMSKR  +SF  KESLGH
Sbjct: 449 LVIFRGEKKKTKMLRKTRDPRWNEEFQFMLDEPPLSDKIHIAVMSKRTSISFRSKESLGH 508

Query: 122 VEINLDDVVNNGRTNEKYNLINSKNGKIHI 141
           V+INL+DVV+NGR NEKY+LI+SKNG IH+
Sbjct: 509 VQINLNDVVHNGRINEKYHLIDSKNGVIHV 538

[Close]
BLAST of CmaCh04G013740 vs. TrEMBL
Match: V4TDN7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031152mg PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.3e-38
Identity = 85/152 (55.92%), Postives = 112/152 (73.68%), Query Frame = 1 

Query: 2   FTPFREESMKYLENSISEVKS-EGRSNGQPENQ------------ISDGADIEGEKHNNP 61
           + PF+E+S+K+  +S+S+  S +G  N Q  ++            +    D+EGE HNNP
Sbjct: 392 YVPFKEDSIKF--SSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGENHNNP 451

Query: 62  YAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESL 121
           YA+I ++G++K+TKMI+KTRDP+WNEEF FML+EPP+ EKIHIEVMSKR  + F  KESL
Sbjct: 452 YAIILYKGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRTGIRFWSKESL 511

Query: 122 GHVEINLDDVVNNGRTNEKYNLINSKNGKIHI 141
           GHVEINL DVV+NGR NEKY+LINSK G IH+
Sbjct: 512 GHVEINLTDVVHNGRINEKYHLINSKRGVIHV 541

[Close]
BLAST of CmaCh04G013740 vs. TrEMBL
Match: A0A067E4V3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008950mg PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.3e-38
Identity = 85/152 (55.92%), Postives = 112/152 (73.68%), Query Frame = 1 

Query: 2   FTPFREESMKYLENSISEVKS-EGRSNGQPENQ------------ISDGADIEGEKHNNP 61
           + PF+E+S+K+  +S+S+  S +G  N Q  ++            +    D+EGE HNNP
Sbjct: 392 YVPFKEDSIKF--SSVSKKYSRKGSGNDQSSDEEALSGAGLLSVLVQGAEDVEGENHNNP 451

Query: 62  YAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESL 121
           YA+I ++G++K+TKMI+KTRDP+WNEEF FML+EPP+ EKIHIEVMSKR  + F  KESL
Sbjct: 452 YAIILYKGDKKRTKMIRKTRDPAWNEEFQFMLDEPPLHEKIHIEVMSKRTGIRFWSKESL 511

Query: 122 GHVEINLDDVVNNGRTNEKYNLINSKNGKIHI 141
           GHVEINL DVV+NGR NEKY+LINSK G IH+
Sbjct: 512 GHVEINLTDVVHNGRINEKYHLINSKRGVIHV 541

[Close]
BLAST of CmaCh04G013740 vs. TrEMBL
Match: A0A151SED0_CAJCA (Extended synaptotagmin-2 OS=Cajanus cajan GN=KK1_025082 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-37
Identity = 84/150 (56.00%), Postives = 109/150 (72.67%), Query Frame = 1 

Query: 2   FTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYA 61
           F PF+E+S K+   S    ++E   +   ++++ +GA           ++EG+ HNNP+A
Sbjct: 389 FVPFKEDSGKFGGPSDGYSRNESGIDLVSDDEVQEGAGLLSVVIQEAEEVEGDHHNNPFA 448

Query: 62  VIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLGH 121
           V+ FRGE+KKTKM+KKTR P WNEEF FMLEEPP+ EKIHIEVMSKR   SFL K+SLGH
Sbjct: 449 VLTFRGEKKKTKMMKKTRHPRWNEEFQFMLEEPPLHEKIHIEVMSKRKHFSFLSKDSLGH 508

Query: 122 VEINLDDVVNNGRTNEKYNLINSKNGKIHI 141
           VEINL DVV+N R N+KY+LINS+NG IH+
Sbjct: 509 VEINLSDVVHNSRINDKYHLINSRNGVIHV 538

[Close]
BLAST of CmaCh04G013740 vs. TAIR10
Match: AT5G04220.2 (AT5G04220.2 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 158.3 bits (399), Expect = 3.5e-39
Identity = 84/144 (58.33%), Postives = 102/144 (70.83%), Query Frame = 1 

Query: 2   FTPFREESMKYLENSISEVKSEG----RSNGQPENQISDGADIEGEK-HNNPYAVIHFRG 61
           + PFREES+K  + S  E  SE        G     +    D+EG+K H+NPYAV+ FRG
Sbjct: 390 YVPFREESIKRRKESREEKSSEDDDFLSQAGLLSVAVQSAKDVEGKKKHSNPYAVVLFRG 449

Query: 62  ERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLGHVEINLD 121
           E+KKTKM+KKTRDP WNEEF F LEEPP++E I +EVMSK     F  KE LGHV+INLD
Sbjct: 450 EKKKTKMLKKTRDPRWNEEFQFTLEEPPVKESIRVEVMSKGTGFHFRSKEELGHVDINLD 509

Query: 122 DVVNNGRTNEKYNLINSKNGKIHI 141
           DVV+NGR N+KY+LINS+NG IHI
Sbjct: 510 DVVDNGRINQKYHLINSRNGIIHI 533

[Close]
BLAST of CmaCh04G013740 vs. TAIR10
Match: AT2G20990.3 (AT2G20990.3 synaptotagmin A)

HSP 1 Score: 131.7 bits (330), Expect = 3.5e-31
Identity = 71/145 (48.97%), Postives = 97/145 (66.90%), Query Frame = 1 

Query: 1   MFTPFREESMK--YLENSISEVKSEGR--SNGQPENQISDGADIEGEKHNNPYAVIHFRG 60
           ++ PF EE M   + E    +   EG   + G     +    D+EG+ H NPY  I+F+G
Sbjct: 427 LYKPFTEEEMPKGFEETQAVQKAPEGTPAAGGMLVVIVHSAEDVEGKHHTNPYVRIYFKG 486

Query: 61  ERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQ-KESLGHVEINL 120
           E +KTK +KK RDP WNEEF FMLEEPP+REK+H+EV+S  + +  L  KE+LG+V+I +
Sbjct: 487 EERKTKHVKKNRDPRWNEEFTFMLEEPPVREKLHVEVLSTSSRIGLLHPKETLGYVDIPV 546

Query: 121 DDVVNNGRTNEKYNLINSKNGKIHI 141
            DVVNN R N+K++LI+SKNGKI I
Sbjct: 547 VDVVNNKRMNQKFHLIDSKNGKIQI 571

[Close]
BLAST of CmaCh04G013740 vs. TAIR10
Match: AT2G21010.1 (AT2G21010.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-30
Identity = 67/141 (47.52%), Postives = 94/141 (66.67%), Query Frame = 1 

Query: 1   MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGADIEGEKHNNPYAVIHFRGERKK 60
           ++ PF EE M+ ++ +       G   G     +    D+EG+ H NPY  I+F+GE +K
Sbjct: 111 LYKPFTEEEMQAVQKAPEGTPVAG---GMLVVIVHSAEDVEGKHHTNPYVHIYFKGEERK 170

Query: 61  TKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQ-KESLGHVEINLDDVV 120
           TK +KK +DP WNEEF FMLEEPP+ EK+H+EV S  + +  L  KE+LG+V+I + DVV
Sbjct: 171 TKNVKKNKDPKWNEEFSFMLEEPPVHEKLHVEVFSTSSRIGLLHPKETLGYVDIPVVDVV 230

Query: 121 NNGRTNEKYNLINSKNGKIHI 141
           NN R N+K++LI+SKNGKI I
Sbjct: 231 NNKRMNQKFHLIDSKNGKIQI 248

[Close]
BLAST of CmaCh04G013740 vs. TAIR10
Match: AT1G20080.1 (AT1G20080.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 111.7 bits (278), Expect = 3.8e-25
Identity = 63/145 (43.45%), Postives = 91/145 (62.76%), Query Frame = 1 

Query: 2   FTPFREESMKYLENSISEVKSEGRSNGQPENQ------ISDGADIEGEKHNNPYAVIHFR 61
           + PF+++ +   EN       E    G P         + +  D+EG+ H NP   + FR
Sbjct: 388 YKPFKDDDIP--ENIDDPNAVEKAPEGTPSTGGLLVVIVHEAEDLEGKYHTNPSVRLLFR 447

Query: 62  GERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLGHVEINL 121
           GE +KTK +KK R+P W+E+F F L+EPPI +K+H+EV+S  + L    KE+LG+V INL
Sbjct: 448 GEERKTKRVKKNREPRWDEDFQFPLDEPPINDKLHVEVISSSSRL-IHPKETLGYVVINL 507

Query: 122 DDVVNNGRTNEKYNLINSKNGKIHI 141
            DVV+N R N+KY+LI+SKNG+I I
Sbjct: 508 GDVVSNRRINDKYHLIDSKNGRIQI 529

[Close]
BLAST of CmaCh04G013740 vs. TAIR10
Match: AT2G21040.1 (AT2G21040.1 Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 89.0 bits (219), Expect = 2.6e-18
Identity = 37/70 (52.86%), Postives = 51/70 (72.86%), Query Frame = 1 

Query: 34  ISDGADIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEV 93
           +    D+EG+ H NPY  I+F+GE +KTK +KK +DP WNEEF FMLEEPPI EK+H++V
Sbjct: 22  VHSAEDVEGKHHTNPYVHIYFKGEERKTKHVKKNKDPKWNEEFSFMLEEPPIHEKMHVKV 81

Query: 94  MSKRNVLSFL 104
            S  + + F+
Sbjct: 82  FSTSSRIVFV 91

[Close]
BLAST of CmaCh04G013740 vs. NCBI nr
Match: gi|659092059|ref|XP_008446879.1| (PREDICTED: synaptotagmin-3-like isoform X2 [Cucumis melo])

HSP 1 Score: 235.7 bits (600), Expect = 4.9e-59
Identity = 119/151 (78.81%), Postives = 130/151 (86.09%), Query Frame = 1 

Query: 1   MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPY 60
           +FTP REESMKYLENSIS+VK+EG+S G+PENQI D A           D+EGEKH NPY
Sbjct: 333 LFTPLREESMKYLENSISDVKNEGKSTGEPENQILDEAGVLSVTVQGARDVEGEKHTNPY 392

Query: 61  AVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLG 120
           AVIHFRGE+KKTKM+KKTRDP WNEEFPFMLEEPPIREKIHIEVMSKR V SFLQKESLG
Sbjct: 393 AVIHFRGEKKKTKMMKKTRDPLWNEEFPFMLEEPPIREKIHIEVMSKRTVFSFLQKESLG 452

Query: 121 HVEINLDDVVNNGRTNEKYNLINSKNGKIHI 141
           HVEINL DVV+NGR NEKYNLINS+NGKIH+
Sbjct: 453 HVEINLADVVSNGRINEKYNLINSRNGKIHV 483

[Close]
BLAST of CmaCh04G013740 vs. NCBI nr
Match: gi|659092057|ref|XP_008446878.1| (PREDICTED: synaptotagmin-3-like isoform X1 [Cucumis melo])

HSP 1 Score: 235.7 bits (600), Expect = 4.9e-59
Identity = 119/151 (78.81%), Postives = 130/151 (86.09%), Query Frame = 1 

Query: 1   MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPY 60
           +FTP REESMKYLENSIS+VK+EG+S G+PENQI D A           D+EGEKH NPY
Sbjct: 388 LFTPLREESMKYLENSISDVKNEGKSTGEPENQILDEAGVLSVTVQGARDVEGEKHTNPY 447

Query: 61  AVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLG 120
           AVIHFRGE+KKTKM+KKTRDP WNEEFPFMLEEPPIREKIHIEVMSKR V SFLQKESLG
Sbjct: 448 AVIHFRGEKKKTKMMKKTRDPLWNEEFPFMLEEPPIREKIHIEVMSKRTVFSFLQKESLG 507

Query: 121 HVEINLDDVVNNGRTNEKYNLINSKNGKIHI 141
           HVEINL DVV+NGR NEKYNLINS+NGKIH+
Sbjct: 508 HVEINLADVVSNGRINEKYNLINSRNGKIHV 538

[Close]
BLAST of CmaCh04G013740 vs. NCBI nr
Match: gi|659092061|ref|XP_008446880.1| (PREDICTED: synaptotagmin-3-like isoform X3 [Cucumis melo])

HSP 1 Score: 235.7 bits (600), Expect = 4.9e-59
Identity = 119/151 (78.81%), Postives = 130/151 (86.09%), Query Frame = 1 

Query: 1   MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPY 60
           +FTP REESMKYLENSIS+VK+EG+S G+PENQI D A           D+EGEKH NPY
Sbjct: 189 LFTPLREESMKYLENSISDVKNEGKSTGEPENQILDEAGVLSVTVQGARDVEGEKHTNPY 248

Query: 61  AVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLG 120
           AVIHFRGE+KKTKM+KKTRDP WNEEFPFMLEEPPIREKIHIEVMSKR V SFLQKESLG
Sbjct: 249 AVIHFRGEKKKTKMMKKTRDPLWNEEFPFMLEEPPIREKIHIEVMSKRTVFSFLQKESLG 308

Query: 121 HVEINLDDVVNNGRTNEKYNLINSKNGKIHI 141
           HVEINL DVV+NGR NEKYNLINS+NGKIH+
Sbjct: 309 HVEINLADVVSNGRINEKYNLINSRNGKIHV 339

[Close]
BLAST of CmaCh04G013740 vs. NCBI nr
Match: gi|449449290|ref|XP_004142398.1| (PREDICTED: synaptotagmin-3 isoform X1 [Cucumis sativus])

HSP 1 Score: 212.2 bits (539), Expect = 5.8e-52
Identity = 112/151 (74.17%), Postives = 121/151 (80.13%), Query Frame = 1 

Query: 1   MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGADI-----------EGEKHNNPY 60
           +FTP REESMKYLENSIS+VK       + EN++ + A +           EGEKH NPY
Sbjct: 388 LFTPLREESMKYLENSISDVK-------EAENEVLEEAGVLSVTIQGAHGVEGEKHTNPY 447

Query: 61  AVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLG 120
           AVIHFRGERKKTKM+KKTRDP WNEEFPFMLEEPPI EKIHIEVMSKR V SFLQKESLG
Sbjct: 448 AVIHFRGERKKTKMMKKTRDPLWNEEFPFMLEEPPIGEKIHIEVMSKRTVFSFLQKESLG 507

Query: 121 HVEINLDDVVNNGRTNEKYNLINSKNGKIHI 141
           HVEINL DVV+NGR NEKYNLINSKNGKIHI
Sbjct: 508 HVEINLADVVSNGRINEKYNLINSKNGKIHI 531

[Close]
BLAST of CmaCh04G013740 vs. NCBI nr
Match: gi|778706624|ref|XP_011655880.1| (PREDICTED: synaptotagmin-3 isoform X2 [Cucumis sativus])

HSP 1 Score: 212.2 bits (539), Expect = 5.8e-52
Identity = 112/151 (74.17%), Postives = 121/151 (80.13%), Query Frame = 1 

Query: 1   MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGADI-----------EGEKHNNPY 60
           +FTP REESMKYLENSIS+VK       + EN++ + A +           EGEKH NPY
Sbjct: 247 LFTPLREESMKYLENSISDVK-------EAENEVLEEAGVLSVTIQGAHGVEGEKHTNPY 306

Query: 61  AVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLG 120
           AVIHFRGERKKTKM+KKTRDP WNEEFPFMLEEPPI EKIHIEVMSKR V SFLQKESLG
Sbjct: 307 AVIHFRGERKKTKMMKKTRDPLWNEEFPFMLEEPPIGEKIHIEVMSKRTVFSFLQKESLG 366

Query: 121 HVEINLDDVVNNGRTNEKYNLINSKNGKIHI 141
           HVEINL DVV+NGR NEKYNLINSKNGKIHI
Sbjct: 367 HVEINLADVVSNGRINEKYNLINSKNGKIHI 390

The following BLAST results are available for this feature:
BLAST of CmaCh04G013740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SYT3_ARATH6.2e-3858.33Synaptotagmin-3 OS=Arabidopsis thaliana GN=SYT3 PE=2 SV=1[more]
SYT1_ARATH6.2e-3048.97Synaptotagmin-1 OS=Arabidopsis thaliana GN=SYT1 PE=1 SV=2[more]
SYT2_ARATH6.7e-2443.45Synaptotagmin-2 OS=Arabidopsis thaliana GN=SYT2 PE=2 SV=1[more]
BLAST of CmaCh04G013740 vs. TrEMBL
Match NameE-valueIdentityDescription
B9T8I4_RICCO1.5e-3861.11Calcium lipid binding protein, putative OS=Ricinus communis GN=RCOM_0185810 PE=4... [more]
A0A059BHE2_EUCGR4.3e-3858.00Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02846 PE=4 SV=1[more]
V4TDN7_9ROSI4.3e-3855.92Uncharacterized protein OS=Citrus clementina GN=CICLE_v10031152mg PE=4 SV=1[more]
A0A067E4V3_CITSI4.3e-3855.92Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008950mg PE=4 SV=1[more]
A0A151SED0_CAJCA1.6e-3756.00Extended synaptotagmin-2 OS=Cajanus cajan GN=KK1_025082 PE=4 SV=1[more]
BLAST of CmaCh04G013740 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G04220.23.5e-3958.33 Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT2G20990.33.5e-3148.97 synaptotagmin A[more]
AT2G21010.11.3e-3047.52 Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT1G20080.13.8e-2543.45 Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT2G21040.12.6e-1852.86 Calcium-dependent lipid-binding (CaLB domain) family protein[more]
BLAST of CmaCh04G013740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659092059|ref|XP_008446879.1|4.9e-5978.81PREDICTED: synaptotagmin-3-like isoform X2 [Cucumis melo][more]
gi|659092057|ref|XP_008446878.1|4.9e-5978.81PREDICTED: synaptotagmin-3-like isoform X1 [Cucumis melo][more]
gi|659092061|ref|XP_008446880.1|4.9e-5978.81PREDICTED: synaptotagmin-3-like isoform X3 [Cucumis melo][more]
gi|449449290|ref|XP_004142398.1|5.8e-5274.17PREDICTED: synaptotagmin-3 isoform X1 [Cucumis sativus][more]
gi|778706624|ref|XP_011655880.1|5.8e-5274.17PREDICTED: synaptotagmin-3 isoform X2 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008289 lipid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G013740.1CmaCh04G013740.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainGENE3DG3DSA:2.60.40.150coord: 44..141
score: 2.9
IPR000008C2 domainPFAMPF00168C2coord: 43..130
score: 1.5
IPR000008C2 domainSMARTSM00239C2_3ccoord: 12..127
score: 4.0
IPR000008C2 domainPROFILEPS50004C2coord: 3..112
score: 10
IPR000008C2 domainunknownSSF49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 44..139
score: 1.18
NoneNo IPR availablePANTHERPTHR10774EXTENDED SYNAPTOTAGMIN-RELATEDcoord: 2..140
score: 9.1
NoneNo IPR availablePANTHERPTHR10774:SF62SYNAPTOTAGMIN-3coord: 2..140
score: 9.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G013740CmoCh04G014470Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G013740CmoCh15G004770Cucurbita moschata (Rifu)cmacmoB691
CmaCh04G013740Lsi08G007160Bottle gourd (USVL1VR-Ls)cmalsiB706
CmaCh04G013740Lsi04G000760Bottle gourd (USVL1VR-Ls)cmalsiB669
CmaCh04G013740Cp4.1LG13g09990Cucurbita pepo (Zucchini)cmacpeB712
CmaCh04G013740Cp4.1LG01g14580Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G013740MELO3C034023.2Melon (DHL92) v3.6.1cmamedB726
CmaCh04G013740CsaV3_5G036200Cucumber (Chinese Long) v3cmacucB0885
CmaCh04G013740Cla97C08G150320Watermelon (97103) v2cmawmbB787
CmaCh04G013740Cla97C05G102730Watermelon (97103) v2cmawmbB758
CmaCh04G013740Bhi07G000728Wax gourdcmawgoB0903
CmaCh04G013740Bhi04G001081Wax gourdcmawgoB0873
CmaCh04G013740CsGy5G026500Cucumber (Gy14) v2cgybcmaB672
CmaCh04G013740Carg02412Silver-seed gourdcarcmaB0370
CmaCh04G013740Carg20699Silver-seed gourdcarcmaB0673
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh04G013740CmaCh15G004670Cucurbita maxima (Rimu)cmacmaB321
CmaCh04G013740CmaCh18G008950Cucurbita maxima (Rimu)cmacmaB402
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G013740Silver-seed gourdcarcmaB0966
CmaCh04G013740Silver-seed gourdcarcmaB1170
CmaCh04G013740Cucurbita maxima (Rimu)cmacmaB536
CmaCh04G013740Cucumber (Gy14) v1cgycmaB0850
CmaCh04G013740Cucurbita moschata (Rifu)cmacmoB706
CmaCh04G013740Cucurbita moschata (Rifu)cmacmoB740
CmaCh04G013740Wild cucumber (PI 183967)cmacpiB755
CmaCh04G013740Cucumber (Chinese Long) v2cmacuB748
CmaCh04G013740Melon (DHL92) v3.5.1cmameB640
CmaCh04G013740Watermelon (Charleston Gray)cmawcgB655
CmaCh04G013740Watermelon (Charleston Gray)cmawcgB679
CmaCh04G013740Watermelon (97103) v1cmawmB667
CmaCh04G013740Watermelon (97103) v1cmawmB699
CmaCh04G013740Cucurbita pepo (Zucchini)cmacpeB700
CmaCh04G013740Cucurbita pepo (Zucchini)cmacpeB734