BLAST of CmaCh04G013320 vs. Swiss-Prot
Match:
FB304_ARATH (F-box protein At3g54460 OS=Arabidopsis thaliana GN=At3g54460 PE=2 SV=1)
HSP 1 Score: 457.2 bits (1175), Expect = 2.6e-127
Identity = 262/582 (45.02%), Postives = 356/582 (61.17%), Query Frame = 1
Query: 8 DYKLCGFLCVVLAVPSPQSELVNALRPGTRCYVSVECSDVCFTSEYGVVLT---PIEANP 67
D+KLCGFLC VL+V SP + L+ G+ C++ + S F SE G++L+ PI
Sbjct: 4 DHKLCGFLCTVLSVDSP-----DLLQSGSSCFIFNDGSVTGFKSENGLILSLTNPISNLQ 63
Query: 68 KPLSKAG---------------VSPQDSEQCRGMVGGEGTSTVENGDLTLKRKM--SARG 127
+S G +PQ +C EG S+ + KR++ ++
Sbjct: 64 SLISSKGDHDVENSGTIEDGRLETPQKRRKCV-----EGESSGKRKTPKSKRRVLSGSKE 123
Query: 128 RRTSGKKRTNRMGLVHGSMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVH 187
+ G+KR +G+V+GS+SVV Q+HALV +KCLKI +V+ VD G + E RAV+LVDV+
Sbjct: 124 KTVQGRKRVKSIGMVNGSISVVQQLHALVANKCLKIICRVVKVDKGENGEERAVVLVDVY 183
Query: 188 LPVELWSGWQFPRSKTVAGALFRHLSCEWQERSSILVGKDHSQVADMVRKSVWNPAECHV 247
LP+ELWSGWQFP+S+ A ALF+HLSC+W R SIL GK + A+ K++W+ ++CHV
Sbjct: 184 LPIELWSGWQFPKSQATAAALFKHLSCDWGLRVSILDGKSIWEEANGRIKAIWDLSDCHV 243
Query: 248 HNCKLHNSPGGSSNRRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVL 307
+CKL + S RRLF+LHEIF+SLPS +R+ P D SG+WD+SDDVL
Sbjct: 244 FDCKLLCNAPNSPKRRLFKLHEIFKSLPSPGNHDVSYSSRVLPSTDSCVSGVWDLSDDVL 303
Query: 308 INIMKALRPLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLRRERNAEVFYH 367
I+I+ L DL +A+ C RSL++ I+PCM LKL+PHQQAAV WML RER AEV H
Sbjct: 304 ISILMKLDTKDLFSIAAVCRLFRSLTSLIVPCMNLKLFPHQQAAVGWMLERERKAEVSSH 363
Query: 368 PLYVPFSTEDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQG 427
PLY+ F TEDGFSF++N VTG+I+T P + DFRGG+FCDEPGLGKTITALSLILKTQG
Sbjct: 364 PLYLSFDTEDGFSFYVNAVTGDIITEAAPMVKDFRGGMFCDEPGLGKTITALSLILKTQG 423
Query: 428 TLAEPPPGVQIVWCTHNGNRKCGYYEVSSNSNTSTNHLLVKEAVGCSSLKGMEDLTYHTP 487
T+A+PP G+ IVWCTH ++KC YYE +S+ TS + VK SS + P
Sbjct: 424 TMADPPEGLPIVWCTHKSDKKCAYYEYTSDQFTSNSMSAVKRFQSPSSCRNQVSFEAFRP 483
Query: 488 ---------KRARLTTLDDRHTVTDDSCASNEMIS--PSSTDYAKAVQMVRCTRSLSSVE 547
K+ARL DD+ + +S NE + P+S D +C +SL +V
Sbjct: 484 LLESKSLPFKQARLMDPDDQTLESKNSNFENEFETHIPASLDL-----KAQCRKSLGNVR 543
Query: 548 RNLLLTYEGASSLSRHLNTGKKSTRTRTGKLAAGAKRAGVSN 559
+NLL Y GAS LS + + S + G + G KR G+++
Sbjct: 544 KNLLPAYNGASELSEVMEAKRISNWKKCG-MITGCKRKGLTD 569
BLAST of CmaCh04G013320 vs. Swiss-Prot
Match:
SHPRH_MOUSE (E3 ubiquitin-protein ligase SHPRH OS=Mus musculus GN=Shprh PE=1 SV=1)
HSP 1 Score: 54.7 bits (130), Expect = 3.9e-06
Identity = 36/100 (36.00%), Postives = 51/100 (51.00%), Query Frame = 1
Query: 310 RSLSASIM-PCMKLKLYPHQQAAVEWMLRRER-----NAEVFYHPLYVPFSTEDGFSFHI 369
RS+ + P + L P+Q+ AV WML++E+ A+ H L+ T DG +
Sbjct: 284 RSVQVDVQHPALIPVLRPYQREAVNWMLQQEQFRSAPPADNSLHFLWREIVTPDGLKLYY 343
Query: 370 NTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLIL 404
N TG I+ A GG+ DE GLGKT+ L+LIL
Sbjct: 344 NPYTGCIIRDFPHAGPQLLGGILADEMGLGKTVEVLALIL 383
BLAST of CmaCh04G013320 vs. TrEMBL
Match:
E5GCJ6_CUCME (Chromatin remodeling complex subunit (Fragment) OS=Cucumis melo subsp. melo PE=4 SV=1)
HSP 1 Score: 921.4 bits (2380), Expect = 5.5e-265
Identity = 465/574 (81.01%), Postives = 498/574 (86.76%), Query Frame = 1
Query: 5 DFSDYKLCGFLCVVLAVPSPQSELVNALRPGTRCYVSVECSDVCFTSEYGVVLTPIEANP 64
DFSD+KLCGFL VVLAV SPQSE +N LRPGTRCYVS E SDVCFTS+ GVVL+P+E NP
Sbjct: 6 DFSDFKLCGFLSVVLAVSSPQSEFLNLLRPGTRCYVSAESSDVCFTSQNGVVLSPLEENP 65
Query: 65 KPLSKAGVSPQDSEQCRGMVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMGLVHG 124
K LSK G PQDSEQCRG V GEG E G LT KR +SA G R+S KKRTNRMGLVHG
Sbjct: 66 KSLSKPGALPQDSEQCRGAVNGEGIGAAEIGILTPKRGVSAGGSRSSRKKRTNRMGLVHG 125
Query: 125 SMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRSKTV 184
+MSVV+QIHALVVHKC+KIDAQV FVDI +EARAVLLVDV+LPVELWSGWQFP+SKTV
Sbjct: 126 NMSVVYQIHALVVHKCMKIDAQVTFVDI---QEARAVLLVDVYLPVELWSGWQFPKSKTV 185
Query: 185 AGALFRHLSCEWQERSSILVGKDHSQVADMVRKSVWNPAECHVHNCKLHNSPGGSSNRRL 244
A ALF+HLSCEWQERSSILVGKDHSQ MV KSV N AECHVHNCKLHNS GGS NRRL
Sbjct: 186 AAALFKHLSCEWQERSSILVGKDHSQDVHMVGKSVSNVAECHVHNCKLHNSSGGSPNRRL 245
Query: 245 FELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLINIMKALRPLDLIRVAS 304
FELHEIFRSLPSIL+S KPEYTR+QPEDDY+QSGIWDISDD+L NI+KALRPLDL+RVAS
Sbjct: 246 FELHEIFRSLPSILKSSKPEYTRMQPEDDYAQSGIWDISDDILFNILKALRPLDLVRVAS 305
Query: 305 TCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLRRERNAEVFYHPLYVPFSTEDGFSFHIN 364
TC HLRSL+A IMPCMKLKLYPHQQAAVEWML RER+AEVFYHPL+ P STEDGFSFH+N
Sbjct: 306 TCRHLRSLAALIMPCMKLKLYPHQQAAVEWMLHRERHAEVFYHPLFAPSSTEDGFSFHVN 365
Query: 365 TVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVWCTHN 424
TVTGEIVT G PAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVWCTHN
Sbjct: 366 TVTGEIVTGGAPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVWCTHN 425
Query: 425 GNRKCGYYEVSSNSNTSTNHLLVKEAVGCSSLKGMEDLTYHTPKRARLTTLDDRHTVTDD 484
GNRKCGYYEVSS SNT TNH L+KEAV +SLKG+EDLTY TPKRAR+TTLDDRHT T+
Sbjct: 426 GNRKCGYYEVSSTSNTITNHFLLKEAVEWNSLKGLEDLTYRTPKRARMTTLDDRHT-TNS 485
Query: 485 SCASNEMISPSSTDYAKAVQMVRCTRSLSSVERNLLLTYEGASSLSRHLNTGKKSTRTRT 544
SCA NE+ SPSS DYAKAV MVRCTRSLSSV+RNLLL YEGASSLS+ LN GKKSTRTRT
Sbjct: 486 SCAGNELRSPSSADYAKAVHMVRCTRSLSSVKRNLLLAYEGASSLSKELNDGKKSTRTRT 545
Query: 545 GKLAAGAKRAGV--SNGFTNNYEVPETTTADKFE 577
K G K+ G SNG TNNYE TT ADKFE
Sbjct: 546 RKFPVGEKKVGASPSNGSTNNYEALGTTNADKFE 575
BLAST of CmaCh04G013320 vs. TrEMBL
Match:
A0A0A0KTQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623770 PE=4 SV=1)
HSP 1 Score: 910.2 bits (2351), Expect = 1.3e-261
Identity = 458/576 (79.51%), Postives = 496/576 (86.11%), Query Frame = 1
Query: 6 FSDYKLCGFLCVVLAVPSPQSELVNALRPGTRCYVSVECSDVCFTSEYGVVLTPIEANPK 65
FSDYKLCGFLCVVLAVPSPQ +L+N LRPGTRCYVS E SDVCFTS+ GV+L+PIE +PK
Sbjct: 7 FSDYKLCGFLCVVLAVPSPQFDLLNLLRPGTRCYVSTESSDVCFTSQNGVLLSPIEESPK 66
Query: 66 PLSKAGVSPQDSEQCRGMVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMGLVHGS 125
L K GV PQDSEQCRG V GEG E GD T KR SA G R+S KKRTNRMGLVHG+
Sbjct: 67 SLFKPGVLPQDSEQCRGTVNGEGIGAAEIGDFTPKRGASAGGSRSSRKKRTNRMGLVHGN 126
Query: 126 MSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRSKTVA 185
MSVV+QIHALVVHKC+KIDAQVIF+DI +EARAVLLVDV+LPVELWSGWQFP+SKT+A
Sbjct: 127 MSVVYQIHALVVHKCMKIDAQVIFLDI---QEARAVLLVDVYLPVELWSGWQFPKSKTIA 186
Query: 186 GALFRHLSCEWQERSSILVGKDHSQVADMVRKSVWNPAECHVHNCKLHNSPGGSSNRRLF 245
ALF+HLSCEWQERSSILVGKDHSQ +V KSV N AECHVHNC+LHNS GGS NRRLF
Sbjct: 187 AALFKHLSCEWQERSSILVGKDHSQDVHVVGKSVSNLAECHVHNCQLHNSSGGSPNRRLF 246
Query: 246 ELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLINIMKALRPLDLIRVAST 305
ELHEIFRSLPSIL+S KPEYTR+QPEDDYSQSG+WDISDD+L NI+K LRPLDL+RVAST
Sbjct: 247 ELHEIFRSLPSILKSSKPEYTRMQPEDDYSQSGLWDISDDILFNILKVLRPLDLVRVAST 306
Query: 306 CHHLRSLSASIMPCMKLKLYPHQQAAVEWMLRRERNAEVFYHPLYVPFSTEDGFSFHINT 365
C HLRSL+A IMPCMKLKLYPHQQAAVEWML RER+AE FYHPLY PFSTEDGFSFH+NT
Sbjct: 307 CRHLRSLAALIMPCMKLKLYPHQQAAVEWMLHRERHAESFYHPLYAPFSTEDGFSFHVNT 366
Query: 366 VTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVWCTHNG 425
VTGEIVT G PAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPG QIVWCTHNG
Sbjct: 367 VTGEIVTGGAPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGAQIVWCTHNG 426
Query: 426 NRKCGYYEVSSNSNTSTNHLLVKEAVGCSSLKGMEDLTYHTPKRARLTTLDDRHTVTDDS 485
NRKCGYYEVSS SNT TNH ++KEAV + LKG+EDLTYHTPKRAR+TTLDDRHT T++S
Sbjct: 427 NRKCGYYEVSSTSNTITNHFVLKEAVEWNPLKGLEDLTYHTPKRARMTTLDDRHT-TNNS 486
Query: 486 CASNEMISPSSTDYAKAVQMVRCTRSLSSVERNLLLTYEGASSLSRHLNTGKKSTRTRTG 545
CA NE+ SPSS AV MVRCTRSLSSV+RNLLL YEGASSLS+ LN GKKSTRTRT
Sbjct: 487 CAGNELSSPSS-----AVDMVRCTRSLSSVKRNLLLAYEGASSLSKELNDGKKSTRTRTR 546
Query: 546 KLAAGAKRAGV-----SNGFTNNYEVPETTTADKFE 577
K G K+ G SNGFTNNYEV TT ADKFE
Sbjct: 547 KFPVGEKKVGASPASPSNGFTNNYEVLGTTNADKFE 573
BLAST of CmaCh04G013320 vs. TrEMBL
Match:
M5XQS9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015535mg PE=4 SV=1)
HSP 1 Score: 513.1 bits (1320), Expect = 4.5e-142
Identity = 280/546 (51.28%), Postives = 374/546 (68.50%), Query Frame = 1
Query: 2 DDDDFSDYKLCGFLCVVLAVPSPQSELVNALRP-GTRCYVSVECSDVCFTSEYGVVLTPI 61
D FSD+K CGFLC VL V SP + + P GTR S + V FTS VVL+PI
Sbjct: 6 DTVSFSDHKRCGFLCAVLTVTSPDHPDLRQILPFGTRFQFSP--TGVSFTSRNDVVLSPI 65
Query: 62 EANPKPLSKAGVSPQDSEQCRGMVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMG 121
+ NP DSEQC E +S+ E G KRK ++ +KR+ +G
Sbjct: 66 DENPNADDSTN---NDSEQC------EASSSSELGK---KRKAPEVSKKIGMRKRS--IG 125
Query: 122 LVHGSMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPR 181
LV+GS+SVVHQ+H+LV++KCL IDA+++ V+ G + E RAVLLVDV+L + L SGWQFPR
Sbjct: 126 LVNGSISVVHQLHSLVMNKCLMIDARLVRVEAGANGEVRAVLLVDVYLTIALLSGWQFPR 185
Query: 182 SKTVAGALFRHLSCEWQERSSILVGKDHSQVADMVRKSVWNPAECHVHNCKLHNSPGGSS 241
S +VAGALFRHLS +W ERS++L+ D+ + +S+WN ++CHV CKLH++ SS
Sbjct: 186 SGSVAGALFRHLSSDWAERSAMLMNGDYLENTVGTNRSIWNLSDCHVFGCKLHHNFSDSS 245
Query: 242 NRRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLINIMKALRPLDLI 301
+RLFELHEIF+SLPS+ + KP +RIQ DD +SGI +ISDD+L+ I+ L P+DL+
Sbjct: 246 KKRLFELHEIFKSLPSVATTGKPNSSRIQSCDDSCRSGISEISDDILLGILAVLSPIDLV 305
Query: 302 RVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLRRERNAEVFYHPLYVPFSTEDGFS 361
RV++TC HLR L+ SIMPCMKLKL+PHQQAAVEWML+RERNA+V HPLY+ FSTEDGFS
Sbjct: 306 RVSATCRHLRLLATSIMPCMKLKLFPHQQAAVEWMLQRERNADVLPHPLYMAFSTEDGFS 365
Query: 362 FHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVW 421
F+INT++GEI+T P + DF GG+FCDEPGLGKTITALSLILKTQGTL+ PP GV + W
Sbjct: 366 FYINTISGEIITGVAPTVNDFHGGMFCDEPGLGKTITALSLILKTQGTLSNPPDGVHVNW 425
Query: 422 CTHNGNRKCGYYEVSSNSNTSTNHLLVKEAVGCSSLKGMEDLTYHTPKRARLTTLDDRHT 481
C HNG+++CGYYE++ T N L K +G ++ + Y+ KRAR+ LD++
Sbjct: 426 CMHNGDQRCGYYELNGVHATDRNMLSEKRDMGQNAQTILAYSKYYRSKRARV-LLDEQIP 485
Query: 482 VTDDSC--ASNEMISPSSTDYA-KAVQMVRCTRSLSSVERNLLLTYEGASSLSRHLNTGK 541
++SC S + I ++ Y+ A+ +V+CTR+LS + +NL +E ASS SR GK
Sbjct: 486 GFNNSCPGPSGKGIETAAGAYSDPAMCVVQCTRNLSRISKNLFPAFEVASSKSRKRKAGK 534
Query: 542 KSTRTR 544
S+R +
Sbjct: 546 NSSRMK 534
BLAST of CmaCh04G013320 vs. TrEMBL
Match:
A5BGE7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032626 PE=4 SV=1)
HSP 1 Score: 501.9 bits (1291), Expect = 1.0e-138
Identity = 258/462 (55.84%), Postives = 329/462 (71.21%), Query Frame = 1
Query: 2 DDDDFSDYKLCGFLCVVLAVPSPQSELVNALRPGTRCYVSVECSDVCFTSEYGVVLTPIE 61
DDD D+K CGFL VLA+ PQ+ L GTRC++ + S+V F SE V+L+P++
Sbjct: 4 DDDSIPDHKHCGFLSAVLAINPPQT-----LDSGTRCHIFGDGSEVGFRSENDVILSPVD 63
Query: 62 ANPKPLSKAGVSPQDSEQCRGMVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMGL 121
SKA S DS +C S +KR +GL
Sbjct: 64 ------SKAKTSTGDSGEC------------------------------SRRKRKRGIGL 123
Query: 122 VHGSMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRS 181
VHGS+SVV QIHALVVHKC+KI A+V+ V EARAV+LVDV+LP+ELWSGWQFPRS
Sbjct: 124 VHGSISVVRQIHALVVHKCVKIVARVV----RVCGEARAVVLVDVYLPIELWSGWQFPRS 183
Query: 182 KTVAGALFRHLSCEWQERSSILVG-KDHSQVADMVRKSVWNPAECHVHNCKLHNSPGGSS 241
+ AGALFRHLSC+W+ERSS+LV +++ + D +S+WN ++CHV CKLH + S
Sbjct: 184 ASTAGALFRHLSCDWEERSSVLVNHEEYYKYNDGDNRSLWNLSDCHVLGCKLHCNALDPS 243
Query: 242 NRRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLINIMKALRPLDLI 301
++LFELHEIF+SLPS+ +P+ +R++P D QSGIW++SDDVLINI+ AL P+DL+
Sbjct: 244 KKKLFELHEIFKSLPSVAMKGQPDSSRVKPSDASCQSGIWEVSDDVLINILTALAPMDLV 303
Query: 302 RVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLRRERNAEVFYHPLYVPFSTEDGFS 361
RV++TCHHLRSL+ASIMPCMKLKL+PHQ AAVEWML+RERNAE+ HPL++ F TEDGF+
Sbjct: 304 RVSATCHHLRSLAASIMPCMKLKLFPHQHAAVEWMLQRERNAEILPHPLFIDFLTEDGFA 363
Query: 362 FHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVW 421
F+INTVTGEIVT P I DFRGG+FCDEPGLGKTITALSLILKTQGT A+PP GVQ++W
Sbjct: 364 FYINTVTGEIVTGMPPLIRDFRGGMFCDEPGLGKTITALSLILKTQGTWADPPDGVQVIW 419
Query: 422 CTHNGNRKCGYYEVSSNSNTSTNHLLV-KEAVGCSSLKGMED 462
CTHN +++CGYYE++S+ N S N + K +G KG+ D
Sbjct: 424 CTHNSDQRCGYYELTSD-NVSVNKMFSGKRILGQGCSKGLCD 419
BLAST of CmaCh04G013320 vs. TrEMBL
Match:
A0A0D2RW69_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G017400 PE=4 SV=1)
HSP 1 Score: 500.4 bits (1287), Expect = 3.0e-138
Identity = 284/581 (48.88%), Postives = 363/581 (62.48%), Query Frame = 1
Query: 3 DDDFSDYKLCGFLCVVLAVPSPQSELVNALRPGTRCYVSVECSDVCFTSEYGVVLTPIEA 62
D+ D+KLCG+LC VL +P P S G + + + VCF + GVVL+ I
Sbjct: 4 DEKVPDHKLCGYLCAVLTLP-PLSIASTTPFSGPCHLTTADDNGVCFRCQNGVVLSAIR- 63
Query: 63 NPKPLSKAGVSPQDSEQCRGMVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMGLV 122
A VS G V+N RK RGR+ +G+V
Sbjct: 64 ------NAAVS--------------GPDNVKN-----SRK---RGRKN--------IGMV 123
Query: 123 HGSMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRSK 182
+GS+SVV+QIHALV HKCLKI A+V+ V+ EEARAV+LVDV+LPV+LWSGWQFPRS
Sbjct: 124 NGSISVVNQIHALVAHKCLKIQARVLSVEES-GEEARAVVLVDVYLPVDLWSGWQFPRSA 183
Query: 183 TVAGALFRHLSCEWQERSSILV-GKDHSQVADMVRKSVWNPAECHVHNCKLHNSPGGSSN 242
+VAG+LFRH+SC+W+ER+ +L G + + A +S+W+ +CHV CKLH +
Sbjct: 184 SVAGSLFRHISCDWKERNLMLTNGTEIGKDAHGNLRSIWSVFDCHVLGCKLHCNGVDPLK 243
Query: 243 RRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLINIMKALRPLDLIR 302
+RLFELH+IF+SLPS+ + +R+QP DD SGIWD++DD+LI ++ AL P DL R
Sbjct: 244 KRLFELHDIFKSLPSVTNNEMAHSSRVQPTDDILNSGIWDLTDDILIYVLAALGPKDLTR 303
Query: 303 VASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLRRERNAEVFYHPLYVPFSTEDGFSF 362
VA+TC HLRSL+A IMPCMKLKL+PHQQAAVEWMLRRERNA+V HPLY+ FSTEDGF F
Sbjct: 304 VAATCRHLRSLAALIMPCMKLKLFPHQQAAVEWMLRRERNADVLRHPLYMEFSTEDGFPF 363
Query: 363 HINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVWC 422
++N+V G IVT P I DFRGG+FCDEPGLGKTIT+LSLILKTQGT+A+PP GVQI+WC
Sbjct: 364 YVNSVVGSIVTGTAPTIRDFRGGMFCDEPGLGKTITSLSLILKTQGTVADPPDGVQIIWC 423
Query: 423 THNGNRKCGYYEVSSNSNTSTNHLLVKEAVGCSSLKG---------MEDLTYHTPKRARL 482
THNGN KCGYYE+ + T N K + L+G MED+ Y PKR RL
Sbjct: 424 THNGNDKCGYYELRGDKITCNNMTSGKRTTSLNVLRGQSSLGKLCLMEDINYPLPKRHRL 483
Query: 483 TTLDDRHTVTDDSCASNEMISPSSTDYAKAVQMVRCTRSLSSVERNLLLTYEGASSL--- 542
T+ +R DDSC+S + SPS+T VR +R+L+ + +NLL Y+G S
Sbjct: 484 TSPGERSAEFDDSCSSGRIKSPSATHSEPVTWAVRSSRNLAHIRKNLLYAYDGLSGSCKG 543
Query: 543 ------------SRHLNTGKK---STRTRTGKLAAGAKRAG 556
SRH+ GK S G + AG AG
Sbjct: 544 KTIETNMPIRNGSRHVYRGKPVDLSFGVLDGCMRAGKGNAG 545
BLAST of CmaCh04G013320 vs. TAIR10
Match:
AT3G54460.1 (AT3G54460.1 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein)
HSP 1 Score: 457.2 bits (1175), Expect = 1.5e-128
Identity = 262/582 (45.02%), Postives = 356/582 (61.17%), Query Frame = 1
Query: 8 DYKLCGFLCVVLAVPSPQSELVNALRPGTRCYVSVECSDVCFTSEYGVVLT---PIEANP 67
D+KLCGFLC VL+V SP + L+ G+ C++ + S F SE G++L+ PI
Sbjct: 4 DHKLCGFLCTVLSVDSP-----DLLQSGSSCFIFNDGSVTGFKSENGLILSLTNPISNLQ 63
Query: 68 KPLSKAG---------------VSPQDSEQCRGMVGGEGTSTVENGDLTLKRKM--SARG 127
+S G +PQ +C EG S+ + KR++ ++
Sbjct: 64 SLISSKGDHDVENSGTIEDGRLETPQKRRKCV-----EGESSGKRKTPKSKRRVLSGSKE 123
Query: 128 RRTSGKKRTNRMGLVHGSMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVH 187
+ G+KR +G+V+GS+SVV Q+HALV +KCLKI +V+ VD G + E RAV+LVDV+
Sbjct: 124 KTVQGRKRVKSIGMVNGSISVVQQLHALVANKCLKIICRVVKVDKGENGEERAVVLVDVY 183
Query: 188 LPVELWSGWQFPRSKTVAGALFRHLSCEWQERSSILVGKDHSQVADMVRKSVWNPAECHV 247
LP+ELWSGWQFP+S+ A ALF+HLSC+W R SIL GK + A+ K++W+ ++CHV
Sbjct: 184 LPIELWSGWQFPKSQATAAALFKHLSCDWGLRVSILDGKSIWEEANGRIKAIWDLSDCHV 243
Query: 248 HNCKLHNSPGGSSNRRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVL 307
+CKL + S RRLF+LHEIF+SLPS +R+ P D SG+WD+SDDVL
Sbjct: 244 FDCKLLCNAPNSPKRRLFKLHEIFKSLPSPGNHDVSYSSRVLPSTDSCVSGVWDLSDDVL 303
Query: 308 INIMKALRPLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLRRERNAEVFYH 367
I+I+ L DL +A+ C RSL++ I+PCM LKL+PHQQAAV WML RER AEV H
Sbjct: 304 ISILMKLDTKDLFSIAAVCRLFRSLTSLIVPCMNLKLFPHQQAAVGWMLERERKAEVSSH 363
Query: 368 PLYVPFSTEDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQG 427
PLY+ F TEDGFSF++N VTG+I+T P + DFRGG+FCDEPGLGKTITALSLILKTQG
Sbjct: 364 PLYLSFDTEDGFSFYVNAVTGDIITEAAPMVKDFRGGMFCDEPGLGKTITALSLILKTQG 423
Query: 428 TLAEPPPGVQIVWCTHNGNRKCGYYEVSSNSNTSTNHLLVKEAVGCSSLKGMEDLTYHTP 487
T+A+PP G+ IVWCTH ++KC YYE +S+ TS + VK SS + P
Sbjct: 424 TMADPPEGLPIVWCTHKSDKKCAYYEYTSDQFTSNSMSAVKRFQSPSSCRNQVSFEAFRP 483
Query: 488 ---------KRARLTTLDDRHTVTDDSCASNEMIS--PSSTDYAKAVQMVRCTRSLSSVE 547
K+ARL DD+ + +S NE + P+S D +C +SL +V
Sbjct: 484 LLESKSLPFKQARLMDPDDQTLESKNSNFENEFETHIPASLDL-----KAQCRKSLGNVR 543
Query: 548 RNLLLTYEGASSLSRHLNTGKKSTRTRTGKLAAGAKRAGVSN 559
+NLL Y GAS LS + + S + G + G KR G+++
Sbjct: 544 KNLLPAYNGASELSEVMEAKRISNWKKCG-MITGCKRKGLTD 569
BLAST of CmaCh04G013320 vs. TAIR10
Match:
AT5G05130.1 (AT5G05130.1 DNA/RNA helicase protein)
HSP 1 Score: 49.7 bits (117), Expect = 7.1e-06
Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 1
Query: 320 MKLKLYPHQQAAVEWMLRRERNAEVFYHPLYVPFSTEDGFSFHINTVTGEIVTLGTPAIT 379
+K +L+ HQ+ + W+L RE++ E+ PF E F +NT+T
Sbjct: 208 IKSELFAHQKEGLGWLLHREKSGEL------PPFWEEKDGEF-LNTLTNY---RSDKRPD 267
Query: 380 DFRGGLFCDEPGLGKTITALSLI 403
RGG+F D+ GLGKT+T LSLI
Sbjct: 268 PLRGGVFADDMGLGKTLTLLSLI 280
BLAST of CmaCh04G013320 vs. NCBI nr
Match:
gi|659092199|ref|XP_008446949.1| (PREDICTED: F-box protein At3g54460 [Cucumis melo])
HSP 1 Score: 921.4 bits (2380), Expect = 7.8e-265
Identity = 465/574 (81.01%), Postives = 498/574 (86.76%), Query Frame = 1
Query: 5 DFSDYKLCGFLCVVLAVPSPQSELVNALRPGTRCYVSVECSDVCFTSEYGVVLTPIEANP 64
DFSD+KLCGFL VVLAV SPQSE +N LRPGTRCYVS E SDVCFTS+ GVVL+P+E NP
Sbjct: 6 DFSDFKLCGFLSVVLAVSSPQSEFLNLLRPGTRCYVSAESSDVCFTSQNGVVLSPLEENP 65
Query: 65 KPLSKAGVSPQDSEQCRGMVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMGLVHG 124
K LSK G PQDSEQCRG V GEG E G LT KR +SA G R+S KKRTNRMGLVHG
Sbjct: 66 KSLSKPGALPQDSEQCRGAVNGEGIGAAEIGILTPKRGVSAGGSRSSRKKRTNRMGLVHG 125
Query: 125 SMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRSKTV 184
+MSVV+QIHALVVHKC+KIDAQV FVDI +EARAVLLVDV+LPVELWSGWQFP+SKTV
Sbjct: 126 NMSVVYQIHALVVHKCMKIDAQVTFVDI---QEARAVLLVDVYLPVELWSGWQFPKSKTV 185
Query: 185 AGALFRHLSCEWQERSSILVGKDHSQVADMVRKSVWNPAECHVHNCKLHNSPGGSSNRRL 244
A ALF+HLSCEWQERSSILVGKDHSQ MV KSV N AECHVHNCKLHNS GGS NRRL
Sbjct: 186 AAALFKHLSCEWQERSSILVGKDHSQDVHMVGKSVSNVAECHVHNCKLHNSSGGSPNRRL 245
Query: 245 FELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLINIMKALRPLDLIRVAS 304
FELHEIFRSLPSIL+S KPEYTR+QPEDDY+QSGIWDISDD+L NI+KALRPLDL+RVAS
Sbjct: 246 FELHEIFRSLPSILKSSKPEYTRMQPEDDYAQSGIWDISDDILFNILKALRPLDLVRVAS 305
Query: 305 TCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLRRERNAEVFYHPLYVPFSTEDGFSFHIN 364
TC HLRSL+A IMPCMKLKLYPHQQAAVEWML RER+AEVFYHPL+ P STEDGFSFH+N
Sbjct: 306 TCRHLRSLAALIMPCMKLKLYPHQQAAVEWMLHRERHAEVFYHPLFAPSSTEDGFSFHVN 365
Query: 365 TVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVWCTHN 424
TVTGEIVT G PAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVWCTHN
Sbjct: 366 TVTGEIVTGGAPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVWCTHN 425
Query: 425 GNRKCGYYEVSSNSNTSTNHLLVKEAVGCSSLKGMEDLTYHTPKRARLTTLDDRHTVTDD 484
GNRKCGYYEVSS SNT TNH L+KEAV +SLKG+EDLTY TPKRAR+TTLDDRHT T+
Sbjct: 426 GNRKCGYYEVSSTSNTITNHFLLKEAVEWNSLKGLEDLTYRTPKRARMTTLDDRHT-TNS 485
Query: 485 SCASNEMISPSSTDYAKAVQMVRCTRSLSSVERNLLLTYEGASSLSRHLNTGKKSTRTRT 544
SCA NE+ SPSS DYAKAV MVRCTRSLSSV+RNLLL YEGASSLS+ LN GKKSTRTRT
Sbjct: 486 SCAGNELRSPSSADYAKAVHMVRCTRSLSSVKRNLLLAYEGASSLSKELNDGKKSTRTRT 545
Query: 545 GKLAAGAKRAGV--SNGFTNNYEVPETTTADKFE 577
K G K+ G SNG TNNYE TT ADKFE
Sbjct: 546 RKFPVGEKKVGASPSNGSTNNYEALGTTNADKFE 575
BLAST of CmaCh04G013320 vs. NCBI nr
Match:
gi|307136385|gb|ADN34195.1| (chromatin remodeling complex subunit [Cucumis melo subsp. melo])
HSP 1 Score: 921.4 bits (2380), Expect = 7.8e-265
Identity = 465/574 (81.01%), Postives = 498/574 (86.76%), Query Frame = 1
Query: 5 DFSDYKLCGFLCVVLAVPSPQSELVNALRPGTRCYVSVECSDVCFTSEYGVVLTPIEANP 64
DFSD+KLCGFL VVLAV SPQSE +N LRPGTRCYVS E SDVCFTS+ GVVL+P+E NP
Sbjct: 6 DFSDFKLCGFLSVVLAVSSPQSEFLNLLRPGTRCYVSAESSDVCFTSQNGVVLSPLEENP 65
Query: 65 KPLSKAGVSPQDSEQCRGMVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMGLVHG 124
K LSK G PQDSEQCRG V GEG E G LT KR +SA G R+S KKRTNRMGLVHG
Sbjct: 66 KSLSKPGALPQDSEQCRGAVNGEGIGAAEIGILTPKRGVSAGGSRSSRKKRTNRMGLVHG 125
Query: 125 SMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRSKTV 184
+MSVV+QIHALVVHKC+KIDAQV FVDI +EARAVLLVDV+LPVELWSGWQFP+SKTV
Sbjct: 126 NMSVVYQIHALVVHKCMKIDAQVTFVDI---QEARAVLLVDVYLPVELWSGWQFPKSKTV 185
Query: 185 AGALFRHLSCEWQERSSILVGKDHSQVADMVRKSVWNPAECHVHNCKLHNSPGGSSNRRL 244
A ALF+HLSCEWQERSSILVGKDHSQ MV KSV N AECHVHNCKLHNS GGS NRRL
Sbjct: 186 AAALFKHLSCEWQERSSILVGKDHSQDVHMVGKSVSNVAECHVHNCKLHNSSGGSPNRRL 245
Query: 245 FELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLINIMKALRPLDLIRVAS 304
FELHEIFRSLPSIL+S KPEYTR+QPEDDY+QSGIWDISDD+L NI+KALRPLDL+RVAS
Sbjct: 246 FELHEIFRSLPSILKSSKPEYTRMQPEDDYAQSGIWDISDDILFNILKALRPLDLVRVAS 305
Query: 305 TCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLRRERNAEVFYHPLYVPFSTEDGFSFHIN 364
TC HLRSL+A IMPCMKLKLYPHQQAAVEWML RER+AEVFYHPL+ P STEDGFSFH+N
Sbjct: 306 TCRHLRSLAALIMPCMKLKLYPHQQAAVEWMLHRERHAEVFYHPLFAPSSTEDGFSFHVN 365
Query: 365 TVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVWCTHN 424
TVTGEIVT G PAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVWCTHN
Sbjct: 366 TVTGEIVTGGAPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVWCTHN 425
Query: 425 GNRKCGYYEVSSNSNTSTNHLLVKEAVGCSSLKGMEDLTYHTPKRARLTTLDDRHTVTDD 484
GNRKCGYYEVSS SNT TNH L+KEAV +SLKG+EDLTY TPKRAR+TTLDDRHT T+
Sbjct: 426 GNRKCGYYEVSSTSNTITNHFLLKEAVEWNSLKGLEDLTYRTPKRARMTTLDDRHT-TNS 485
Query: 485 SCASNEMISPSSTDYAKAVQMVRCTRSLSSVERNLLLTYEGASSLSRHLNTGKKSTRTRT 544
SCA NE+ SPSS DYAKAV MVRCTRSLSSV+RNLLL YEGASSLS+ LN GKKSTRTRT
Sbjct: 486 SCAGNELRSPSSADYAKAVHMVRCTRSLSSVKRNLLLAYEGASSLSKELNDGKKSTRTRT 545
Query: 545 GKLAAGAKRAGV--SNGFTNNYEVPETTTADKFE 577
K G K+ G SNG TNNYE TT ADKFE
Sbjct: 546 RKFPVGEKKVGASPSNGSTNNYEALGTTNADKFE 575
BLAST of CmaCh04G013320 vs. NCBI nr
Match:
gi|449449272|ref|XP_004142389.1| (PREDICTED: F-box protein At3g54460 [Cucumis sativus])
HSP 1 Score: 910.2 bits (2351), Expect = 1.8e-261
Identity = 458/576 (79.51%), Postives = 496/576 (86.11%), Query Frame = 1
Query: 6 FSDYKLCGFLCVVLAVPSPQSELVNALRPGTRCYVSVECSDVCFTSEYGVVLTPIEANPK 65
FSDYKLCGFLCVVLAVPSPQ +L+N LRPGTRCYVS E SDVCFTS+ GV+L+PIE +PK
Sbjct: 7 FSDYKLCGFLCVVLAVPSPQFDLLNLLRPGTRCYVSTESSDVCFTSQNGVLLSPIEESPK 66
Query: 66 PLSKAGVSPQDSEQCRGMVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMGLVHGS 125
L K GV PQDSEQCRG V GEG E GD T KR SA G R+S KKRTNRMGLVHG+
Sbjct: 67 SLFKPGVLPQDSEQCRGTVNGEGIGAAEIGDFTPKRGASAGGSRSSRKKRTNRMGLVHGN 126
Query: 126 MSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRSKTVA 185
MSVV+QIHALVVHKC+KIDAQVIF+DI +EARAVLLVDV+LPVELWSGWQFP+SKT+A
Sbjct: 127 MSVVYQIHALVVHKCMKIDAQVIFLDI---QEARAVLLVDVYLPVELWSGWQFPKSKTIA 186
Query: 186 GALFRHLSCEWQERSSILVGKDHSQVADMVRKSVWNPAECHVHNCKLHNSPGGSSNRRLF 245
ALF+HLSCEWQERSSILVGKDHSQ +V KSV N AECHVHNC+LHNS GGS NRRLF
Sbjct: 187 AALFKHLSCEWQERSSILVGKDHSQDVHVVGKSVSNLAECHVHNCQLHNSSGGSPNRRLF 246
Query: 246 ELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLINIMKALRPLDLIRVAST 305
ELHEIFRSLPSIL+S KPEYTR+QPEDDYSQSG+WDISDD+L NI+K LRPLDL+RVAST
Sbjct: 247 ELHEIFRSLPSILKSSKPEYTRMQPEDDYSQSGLWDISDDILFNILKVLRPLDLVRVAST 306
Query: 306 CHHLRSLSASIMPCMKLKLYPHQQAAVEWMLRRERNAEVFYHPLYVPFSTEDGFSFHINT 365
C HLRSL+A IMPCMKLKLYPHQQAAVEWML RER+AE FYHPLY PFSTEDGFSFH+NT
Sbjct: 307 CRHLRSLAALIMPCMKLKLYPHQQAAVEWMLHRERHAESFYHPLYAPFSTEDGFSFHVNT 366
Query: 366 VTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVWCTHNG 425
VTGEIVT G PAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPG QIVWCTHNG
Sbjct: 367 VTGEIVTGGAPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGAQIVWCTHNG 426
Query: 426 NRKCGYYEVSSNSNTSTNHLLVKEAVGCSSLKGMEDLTYHTPKRARLTTLDDRHTVTDDS 485
NRKCGYYEVSS SNT TNH ++KEAV + LKG+EDLTYHTPKRAR+TTLDDRHT T++S
Sbjct: 427 NRKCGYYEVSSTSNTITNHFVLKEAVEWNPLKGLEDLTYHTPKRARMTTLDDRHT-TNNS 486
Query: 486 CASNEMISPSSTDYAKAVQMVRCTRSLSSVERNLLLTYEGASSLSRHLNTGKKSTRTRTG 545
CA NE+ SPSS AV MVRCTRSLSSV+RNLLL YEGASSLS+ LN GKKSTRTRT
Sbjct: 487 CAGNELSSPSS-----AVDMVRCTRSLSSVKRNLLLAYEGASSLSKELNDGKKSTRTRTR 546
Query: 546 KLAAGAKRAGV-----SNGFTNNYEVPETTTADKFE 577
K G K+ G SNGFTNNYEV TT ADKFE
Sbjct: 547 KFPVGEKKVGASPASPSNGFTNNYEVLGTTNADKFE 573
BLAST of CmaCh04G013320 vs. NCBI nr
Match:
gi|1009172323|ref|XP_015867210.1| (PREDICTED: F-box protein At3g54460 [Ziziphus jujuba])
HSP 1 Score: 540.8 bits (1392), Expect = 2.9e-150
Identity = 290/576 (50.35%), Postives = 393/576 (68.23%), Query Frame = 1
Query: 1 MDDDD--FSDYKLCGFLCVVLAVPSPQSELVNALRPGTRCYVSVECSDVCFTSEYGVVLT 60
MDD+ F D+KLCGFLC VL + SP + LR GTR +S E S++ F S GVVLT
Sbjct: 1 MDDNSSSFPDHKLCGFLCAVLTLNSPIHS--DTLRFGTRFRISRENSELGFRSHCGVVLT 60
Query: 61 PIEANPKPLSKAGVSPQDSEQCRGMVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNR 120
P+ + PK + + DSEQC + + V+N + + M R G KR
Sbjct: 61 PVGSVPKSVLQ---EVHDSEQCEAVE----SEMVKNSNGNRRNSM-----RKLGIKRKRS 120
Query: 121 MGLVHGSMSVVHQIHALVVHKCLKIDAQVIFVDIGVD--EEARAVLLVDVHLPVELWSGW 180
+GLV+GS+SVVHQ+HALV++KCL IDA++++ ++ VD E RAVLLVDV+LPV L +GW
Sbjct: 121 IGLVNGSISVVHQLHALVMNKCLAIDARMVWAEV-VDGGSETRAVLLVDVYLPVALLAGW 180
Query: 181 QFPRSKTVAGALFRHLSCEWQERSSILVGKDHSQVADMVRKSVWNPAECHVHNCKLHNSP 240
QFP+S +VAGALFRHLSC+W ERSS+ +D+ + +++W+ ++CHV CKLH+S
Sbjct: 181 QFPKSGSVAGALFRHLSCDWGERSSMFASEDYCKACLGANRALWDLSDCHVLRCKLHHSV 240
Query: 241 GGSSNRRLFELHEIFRSLPSILRSCKPEYT-RIQPEDDYSQSGIWDISDDVLINIMKALR 300
SS +RLFELHEIF+S+PS+ + P+Y+ RIQPEDD S +GIW++SDD+L+NI+ L
Sbjct: 241 TDSSKKRLFELHEIFKSIPSVTNNRHPDYSSRIQPEDDCSTTGIWEVSDDILMNILATLG 300
Query: 301 PLDLIRVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLRRERNAEVFYHPLYVPFST 360
P++L+RVA+TC HLR L+ SIMPCMKL L+PHQQAAV WML RER+AE+ HPLY ST
Sbjct: 301 PMELVRVAATCRHLRLLAVSIMPCMKLTLFPHQQAAVRWMLHRERHAEILPHPLYKALST 360
Query: 361 EDGFSFHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPG 420
EDGFSF++NT++GEIV+ P I DFRGG+FCDEPGLGKTITALSLILKTQGTLA PP G
Sbjct: 361 EDGFSFYVNTISGEIVSGLAPTINDFRGGMFCDEPGLGKTITALSLILKTQGTLAGPPDG 420
Query: 421 VQIVWCTHNGNRKCGYYEVSSNSNTSTNHLLVKEAVGCSSLKGMEDLTYHTPKRARLTTL 480
VQ+ WCTHNG + CGYYE+ + +S N + AVG + +G+E+ + ++ KR RL L
Sbjct: 421 VQVTWCTHNG-KSCGYYELEGDHLSSGNMVPRMRAVGQKAQRGIEEFSNYSSKRGRLIVL 480
Query: 481 DDRHTVTDDSCASNEMISPSSTDYAKAVQMVRCTRSLSSVERNLLLTYEGASSLSRHLNT 540
D + D C+ + +P++ ++ ++R TRSL+ +++NLL T+EGAS SR
Sbjct: 481 DAKTAGFDLPCSGKRVKTPTAACSNPSMHVLRSTRSLNHIKKNLLFTFEGASDSSRKRKG 540
Query: 541 GKKSTRTRTGKLAAGAKRAGVSNGFTNNYEVPETTT 572
GK S + + A +R S G +NN P T
Sbjct: 541 GKNSRKIKNSSDAQEVER---SKGLSNNCNEPGKVT 557
BLAST of CmaCh04G013320 vs. NCBI nr
Match:
gi|731435550|ref|XP_010645607.1| (PREDICTED: F-box protein At3g54460 isoform X1 [Vitis vinifera])
HSP 1 Score: 539.3 bits (1388), Expect = 8.4e-150
Identity = 295/590 (50.00%), Postives = 388/590 (65.76%), Query Frame = 1
Query: 2 DDDDFSDYKLCGFLCVVLAVPSPQSELVNALRPGTRCYVSVECSDVCFTSEYGVVLTPIE 61
DD +K CGFL VLA+ PQ+ L GTRC++ + S+V F SE V+L+P++
Sbjct: 4 DDHSIPHHKHCGFLSAVLAINPPQT-----LDSGTRCHIFGDGSEVGFRSENDVILSPVD 63
Query: 62 ANPKPLSKAGVSPQDSEQCRGMVGGEGTSTVENGDLTLKRKMSARGRRTSGKKRTNRMGL 121
SKA S DS +C S +KR +GL
Sbjct: 64 ------SKAKTSTGDSGEC------------------------------SRRKRKRGIGL 123
Query: 122 VHGSMSVVHQIHALVVHKCLKIDAQVIFVDIGVDEEARAVLLVDVHLPVELWSGWQFPRS 181
VHGS+SVV QIHALVVHKC+KI A+V+ V EARAV+LVDV+LP+ELWSGWQFPRS
Sbjct: 124 VHGSISVVRQIHALVVHKCVKIVARVV----RVCGEARAVVLVDVYLPIELWSGWQFPRS 183
Query: 182 KTVAGALFRHLSCEWQERSSILVG-KDHSQVADMVRKSVWNPAECHVHNCKLHNSPGGSS 241
+ AGALFRHLSC+W+ERSS+LV +++ + D +S+WN ++CHV CKLH + S
Sbjct: 184 ASTAGALFRHLSCDWEERSSVLVNHEEYYKYNDGDNRSLWNLSDCHVLGCKLHCNALDPS 243
Query: 242 NRRLFELHEIFRSLPSILRSCKPEYTRIQPEDDYSQSGIWDISDDVLINIMKALRPLDLI 301
++LFELHEIF+SLPS+ +P+ +R++P D QSGIW++SDDVLINI+ AL P+DL+
Sbjct: 244 KKKLFELHEIFKSLPSVAMKGQPDSSRVKPSDASCQSGIWEVSDDVLINILTALAPMDLV 303
Query: 302 RVASTCHHLRSLSASIMPCMKLKLYPHQQAAVEWMLRRERNAEVFYHPLYVPFSTEDGFS 361
RV++TCHHLRSL+ASIMPCMKLKL+PHQ AAVEWML+RERNAE+ HPL++ F TEDGF+
Sbjct: 304 RVSATCHHLRSLAASIMPCMKLKLFPHQHAAVEWMLQRERNAEILPHPLFIDFLTEDGFA 363
Query: 362 FHINTVTGEIVTLGTPAITDFRGGLFCDEPGLGKTITALSLILKTQGTLAEPPPGVQIVW 421
F+INTVTGEIVT P I DFRGG+FCDEPGLGKTITALSLILKTQGT A+PP GVQ++W
Sbjct: 364 FYINTVTGEIVTGMPPLIRDFRGGMFCDEPGLGKTITALSLILKTQGTWADPPDGVQVIW 423
Query: 422 CTHNGNRKCGYYEVSSNSNTSTNHLLV-KEAVGCSSLKG---------MEDLTYHTPKRA 481
CTHN +++CGYYE++S+ N S N + K +G + +G ME+ Y +P+R
Sbjct: 424 CTHNSDQRCGYYELTSD-NVSVNKMFSGKRILGQVARRGWLSLDKPTPMENRKYSSPERT 483
Query: 482 RLTTLDDRHTVTDDSCASNEMISPSSTDYAKAVQMVRCTRSLSSVERNLLLTYEGASSLS 541
RL + + DSC + SP++ A ++VRCTRSLS V+RNL+ YE AS
Sbjct: 484 RLVIPGVQIAGSTDSCPGKVIKSPTTVRSMPATRVVRCTRSLSRVKRNLVYAYEEASGFG 543
Query: 542 RHLNTGKKSTRTR----TGKLAAGAKRAGVSNGFTNNYEVPETTTADKFE 577
+ K S+ R T + + KR G+S+G + + E + D E
Sbjct: 544 KERKLKKNSSERRQVANTPRHLSVDKRVGISHGLPHKCKRSEKDSEDHSE 547
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| FB304_ARATH | 2.6e-127 | 45.02 | F-box protein At3g54460 OS=Arabidopsis thaliana GN=At3g54460 PE=2 SV=1 | [more] |
| SHPRH_MOUSE | 3.9e-06 | 36.00 | E3 ubiquitin-protein ligase SHPRH OS=Mus musculus GN=Shprh PE=1 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| E5GCJ6_CUCME | 5.5e-265 | 81.01 | Chromatin remodeling complex subunit (Fragment) OS=Cucumis melo subsp. melo PE=4... | [more] |
| A0A0A0KTQ6_CUCSA | 1.3e-261 | 79.51 | Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623770 PE=4 SV=1 | [more] |
| M5XQS9_PRUPE | 4.5e-142 | 51.28 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015535mg PE=4 SV=1 | [more] |
| A5BGE7_VITVI | 1.0e-138 | 55.84 | Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032626 PE=4 SV=1 | [more] |
| A0A0D2RW69_GOSRA | 3.0e-138 | 48.88 | Uncharacterized protein OS=Gossypium raimondii GN=B456_012G017400 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G54460.1 | 1.5e-128 | 45.02 | SNF2 domain-containing protein / helicase domain-containing protein ... | [more] |
| AT5G05130.1 | 7.1e-06 | 37.35 | DNA/RNA helicase protein | [more] |
