CmaCh04G013110 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGCTGCAACAACAACGGAAACCCAGAGATTCTATACCGAAAGGGAATGCTGGAATTCTTCACCCATTATAGAGAAGCTTCTGGAATGACATATTTAAAGCTTTATGCCCAAAAAGGCTACTCGGAAACTTGTTATGTATACGACATCATTTTGTATGCAACGAGTTTGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAGGCAAAATTAGGGCTTAAACGGGCTGAATGTCGTCGGAGAGTTAAGGAATTTGTTTGTAATCTTTGGGTTAAGAACAATATTCCTTTGTCGGAAAAGGATTTCGGTGACCGGAGGGAATGTGAGAGTGTAGTTAAGAATACTTGTAAGAAGAACGTGAGAAGAATTAGATGGGATGGGAACGATGGGGATGATTATTATGGAGAACACACGTGCGAAGCGTGTAAATGGAATGAGGAAGTTTTGAGATTTTGTAATATGCTTAGAACTGGGAGTTACGATATCATGTTAGGGCACTTGTAGTTACGGAAGACATACCTATATATATATATATATTTATATGAATATTTTAGCGCATTTGAAAGAATCACTAATAACTTAGATTCGTACAGCTTTAAACCGAATAAATTTAGAAGAACTAAACAAATAAAAATATGAAAGTTTGGCGCTAAATTTGTAATTTAAGCTGATTTTGATAATTTGTGAAAGGACGAAAATAGCCTCCACAATTCGAATAATTCTCTGTTCGCAAAAGAACCCTAAACCCATCGCCATAGCCCCACGCACCGAACCACAACAAGAAACCAGGCGAAAGCATCAGAAGTTGACGCCTCTCCAGACGTAATCTCTCTCTCTCTCACTCGGGAATTCGGAGTGATCTTTTTCGTTATGTTGTTTTCCATTTCTCAGTGCGCTGTGATGTGATGTGTGTGCTCTTTAGCGATTCATTGTTTTTCTACTCCAACTCCAATTTGTTCTTCTTTTGGATTTTGAGTTTCTTTGTGTTATCCGTTCTTCTTTCTCTCAGAAGGCGACCACCACTCGAAGAAGCCAAAATTCTCTTTCCGCTACTTTCTGA ATGGAAAGCTGCAACAACAACGGAAACCCAGAGATTCTATACCGAAAGGGAATGCTGGAATTCTTCACCCATTATAGAGAAGCTTCTGGAATGACATATTTAAAGCTTTATGCCCAAAAAGGCTACTCGGAAACTTGTTATGTATACGACATCATTTTGTATGCAACGAGTTTGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAGGCAAAATTAGGGCTTAAACGGGCTGAATGTCGTCGGAGAGTTAAGGAATTTGTTTGTAATCTTTGGGTTAAGAACAATATTCCTTTGTCGGAAAAGGATTTCGGTGACCGGAGGGAATGTGAGAGTGTAGTTAAGAATACTTGTAAGAAGAACGTGAGAAGAATTAGATGGGATGGGAACGATGGGGATGATTATTATGGAGAACACACGTGCGAAGCGTGTAAATGGAATGAGGAAGTTTTGAGATTTTGTAATATGCTTAGAACTGGGAGTTACGATATCATCCCCACGCACCGAACCACAACAAGAAACCAGGCGAAAGCATCAGAAGTTGACGCCTCTCCAGACAAGGCGACCACCACTCGAAGAAGCCAAAATTCTCTTTCCGCTACTTTCTGA ATGGAAAGCTGCAACAACAACGGAAACCCAGAGATTCTATACCGAAAGGGAATGCTGGAATTCTTCACCCATTATAGAGAAGCTTCTGGAATGACATATTTAAAGCTTTATGCCCAAAAAGGCTACTCGGAAACTTGTTATGTATACGACATCATTTTGTATGCAACGAGTTTGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAGGCAAAATTAGGGCTTAAACGGGCTGAATGTCGTCGGAGAGTTAAGGAATTTGTTTGTAATCTTTGGGTTAAGAACAATATTCCTTTGTCGGAAAAGGATTTCGGTGACCGGAGGGAATGTGAGAGTGTAGTTAAGAATACTTGTAAGAAGAACGTGAGAAGAATTAGATGGGATGGGAACGATGGGGATGATTATTATGGAGAACACACGTGCGAAGCGTGTAAATGGAATGAGGAAGTTTTGAGATTTTGTAATATGCTTAGAACTGGGAGTTACGATATCATCCCCACGCACCGAACCACAACAAGAAACCAGGCGAAAGCATCAGAAGTTGACGCCTCTCCAGACAAGGCGACCACCACTCGAAGAAGCCAAAATTCTCTTTCCGCTACTTTCTGA MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLSEKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDIIPTHRTTTRNQAKASEVDASPDKATTTRRSQNSLSATF
BLAST of CmaCh04G013110 vs. TrEMBL
Match: A0A0A0LS96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025065 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 2.6e-52 Identity = 99/162 (61.11%), Postives = 121/162 (74.69%), Query Frame = 1
BLAST of CmaCh04G013110 vs. TrEMBL
Match: A5AV49_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039291 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.2e-18 Identity = 60/169 (35.50%), Postives = 87/169 (51.48%), Query Frame = 1
BLAST of CmaCh04G013110 vs. TrEMBL
Match: A0A0B2P0Z6_GLYSO (Putative F-box protein OS=Glycine soja GN=glysoja_009836 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.2e-14 Identity = 56/159 (35.22%), Postives = 81/159 (50.94%), Query Frame = 1
BLAST of CmaCh04G013110 vs. TrEMBL
Match: I1KMZ2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G247800 PE=4 SV=2) HSP 1 Score: 88.2 bits (217), Expect = 1.2e-14 Identity = 56/159 (35.22%), Postives = 81/159 (50.94%), Query Frame = 1
BLAST of CmaCh04G013110 vs. TrEMBL
Match: B9I6Z5_POPTR (F-box family protein OS=Populus trichocarpa GN=POPTR_0013s01020g PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 9.0e-13 Identity = 52/165 (31.52%), Postives = 79/165 (47.88%), Query Frame = 1
BLAST of CmaCh04G013110 vs. NCBI nr
Match: gi|449439561|ref|XP_004137554.1| (PREDICTED: putative F-box protein At1g67623 [Cucumis sativus]) HSP 1 Score: 213.4 bits (542), Expect = 3.7e-52 Identity = 99/162 (61.11%), Postives = 121/162 (74.69%), Query Frame = 1
BLAST of CmaCh04G013110 vs. NCBI nr
Match: gi|449435498|ref|XP_004135532.1| (PREDICTED: putative F-box protein At1g67623 [Cucumis sativus]) HSP 1 Score: 209.9 bits (533), Expect = 4.1e-51 Identity = 98/162 (60.49%), Postives = 119/162 (73.46%), Query Frame = 1
BLAST of CmaCh04G013110 vs. NCBI nr
Match: gi|659107472|ref|XP_008453691.1| (PREDICTED: putative F-box protein At1g67623 [Cucumis melo]) HSP 1 Score: 209.1 bits (531), Expect = 7.0e-51 Identity = 101/162 (62.35%), Postives = 117/162 (72.22%), Query Frame = 1
BLAST of CmaCh04G013110 vs. NCBI nr
Match: gi|802724919|ref|XP_012085893.1| (PREDICTED: putative F-box protein At1g67623 [Jatropha curcas]) HSP 1 Score: 104.4 bits (259), Expect = 2.4e-19 Identity = 67/187 (35.83%), Postives = 95/187 (50.80%), Query Frame = 1
BLAST of CmaCh04G013110 vs. NCBI nr
Match: gi|147773103|emb|CAN71689.1| (hypothetical protein VITISV_039291 [Vitis vinifera]) HSP 1 Score: 99.8 bits (247), Expect = 6.0e-18 Identity = 60/169 (35.50%), Postives = 87/169 (51.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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