CmaCh04G013100 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G013100
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionF-box family protein
LocationCma_Chr04 : 6662841 .. 6663816 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGGTTCCCTGAAACGAAAATCACAGGCTCTTGGCTCTCAGATTTCACGGTACATTACCTTAATTTTTGCATGCATGCTTTTTTATCAATAAAAAATATTACTATTTTTCGTCTACCAGTTATCAATAATAAATTTATTATGGCGGTTGGGACCAGCTTCTGTCGATTTGGTGGCGGCTCGAGCTCTTCTTTAAATTTGTTTCCCTTTAATTTATGATGTGCAGGAAAACCAAAACAGCGCGTTTGAGCGCTTCTCCACCGGCCATAGAATCACTCCCAAACGATTTATTGATCGAAATTTTGGCAAAAGTTGCAGCTTCTTCATACACCGACTTAGTCCAAGCCAAACTAGCCACCAAAAAATTTCTCGAAGCATCAAGCCACAACTACATATTTCAGCACGCATCTCTTGAAAACTTCCATAAACTTCTATGGAACAACAGCACAGAGTTCTGGTCGTTCATGGAAAAATGCAATAACAACGGAAACCCAGAGACTCTATATCGAAAGGGAATGTTGGAATTCTTCACCCATTGTAGAGAAGCTTCTGGAATGACATATTTAAAGATGTCTGCCCAAAAAGGCTACTCGGAAGCTTGTTACGTATACGGCATCATTTTGTACGCAACGAGTATGGAGGATGAAGGAGTGAAGTTCTTGAAGATTTGCGAGGAAAAATTAGGGTTTAAACTGGCTGAATGTCGTCGGAGAGTTAAGGAATTTGTTCGTCATCTTTGGGTTAAGAACAAGATTTCTGTACAGGAAAAGTATTCCAATGATCGAAGGGGTTGTGAGAATGTGATTAAGAATTGTTGTAAGAAGAACGTGAGAAGAATTGGATGGGATTGGAACGATGAGGATAATTATTATGGAGAAAACACGTGCGAAGCGTGTAAATGGAATGGGGAAGTTTTGAGATTTTGTAATATGCTTAGAACAGGGAGTTATGATATTATGGTAGGGCACTTGTAA

mRNA sequence

ATGGCCGGTTCCCTGAAACGAAAATCACAGGCTCTTGGCTCTCAGATTTCACGGAAAACCAAAACAGCGCGTTTGAGCGCTTCTCCACCGGCCATAGAATCACTCCCAAACGATTTATTGATCGAAATTTTGGCAAAAGTTGCAGCTTCTTCATACACCGACTTAGTCCAAGCCAAACTAGCCACCAAAAAATTTCTCGAAGCATCAAGCCACAACTACATATTTCAGCACGCATCTCTTGAAAACTTCCATAAACTTCTATGGAACAACAGCACAGAGTTCTGGTCGTTCATGGAAAAATGCAATAACAACGGAAACCCAGAGACTCTATATCGAAAGGGAATGTTGGAATTCTTCACCCATTGTAGAGAAGCTTCTGGAATGACATATTTAAAGATGTCTGCCCAAAAAGGCTACTCGGAAGCTTGTTACGTATACGGCATCATTTTGTACGCAACGAGTATGGAGGATGAAGGAGTGAAGTTCTTGAAGATTTGCGAGGAAAAATTAGGGTTTAAACTGGCTGAATGTCGTCGGAGAGTTAAGGAATTTGTTCGTCATCTTTGGGTTAAGAACAAGATTTCTGTACAGGAAAAGTATTCCAATGATCGAAGGGGTTGTGAGAATGTGATTAAGAATTGTTGTAAGAAGAACGTGAGAAGAATTGGATGGGATTGGAACGATGAGGATAATTATTATGGAGAAAACACGTGCGAAGCGTGTAAATGGAATGGGGAAGTTTTGAGATTTTGTAATATGCTTAGAACAGGGAGTTATGATATTATGGTAGGGCACTTGTAA

Coding sequence (CDS)

ATGGCCGGTTCCCTGAAACGAAAATCACAGGCTCTTGGCTCTCAGATTTCACGGAAAACCAAAACAGCGCGTTTGAGCGCTTCTCCACCGGCCATAGAATCACTCCCAAACGATTTATTGATCGAAATTTTGGCAAAAGTTGCAGCTTCTTCATACACCGACTTAGTCCAAGCCAAACTAGCCACCAAAAAATTTCTCGAAGCATCAAGCCACAACTACATATTTCAGCACGCATCTCTTGAAAACTTCCATAAACTTCTATGGAACAACAGCACAGAGTTCTGGTCGTTCATGGAAAAATGCAATAACAACGGAAACCCAGAGACTCTATATCGAAAGGGAATGTTGGAATTCTTCACCCATTGTAGAGAAGCTTCTGGAATGACATATTTAAAGATGTCTGCCCAAAAAGGCTACTCGGAAGCTTGTTACGTATACGGCATCATTTTGTACGCAACGAGTATGGAGGATGAAGGAGTGAAGTTCTTGAAGATTTGCGAGGAAAAATTAGGGTTTAAACTGGCTGAATGTCGTCGGAGAGTTAAGGAATTTGTTCGTCATCTTTGGGTTAAGAACAAGATTTCTGTACAGGAAAAGTATTCCAATGATCGAAGGGGTTGTGAGAATGTGATTAAGAATTGTTGTAAGAAGAACGTGAGAAGAATTGGATGGGATTGGAACGATGAGGATAATTATTATGGAGAAAACACGTGCGAAGCGTGTAAATGGAATGGGGAAGTTTTGAGATTTTGTAATATGCTTAGAACAGGGAGTTATGATATTATGGTAGGGCACTTGTAA

Protein sequence

MAGSLKRKSQALGSQISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQHASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRRVKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEACKWNGEVLRFCNMLRTGSYDIMVGHL
Homology
[Close]
BLAST of CmaCh04G013100 vs. Swiss-Prot
Match: FB79_ARATH (Putative F-box protein At1g67623 OS=Arabidopsis thaliana GN=At1g67623 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 9.6e-16
Identity = 68/231 (29.44%), Postives = 113/231 (48.92%), Query Frame = 1 

Query: 18  RKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQH 77
           RK+KT     +   ++SLP DLL+EI +   ASS + +   +L +K F       Y+F  
Sbjct: 14  RKSKTK----ASLCLDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYR 73

Query: 78  ASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMTYLKMSAQK 137
            SL+    L W+ ++    F+E+C  + NPE L++KG + +F    +  G+ YL  +A+K
Sbjct: 74  LSLKEIEFLPWHENSA--KFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEK 133

Query: 138 GYSEACYVYGIILYAT--SMEDEGVKFLKICEEKLGF----KLAECRRRVKEFVRH--LW 197
           G  EA YVYG+IL       + +G + L    ++L      +L E R ++++ +R+   W
Sbjct: 134 GIKEAKYVYGVILICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQK-IRYGFWW 193

Query: 198 VKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWD-WNDEDNYYGENTCE 240
             N +  Q K +     C+   K      V   GW  + DE +    + CE
Sbjct: 194 SDNTVVEQLKTAYVSEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACE 237

[Close]
BLAST of CmaCh04G013100 vs. Swiss-Prot
Match: FB127_ARATH (F-box protein At2g35280 OS=Arabidopsis thaliana GN=At2g35280 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.9e-06
Identity = 38/138 (27.54%), Postives = 68/138 (49.28%), Query Frame = 1 

Query: 32  IESLPNDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQHASLENFHKLLWNNS 91
           +E+LP DLL EI+AK+   S  D     L+ K+   +++   + +  +L    K   +  
Sbjct: 11  LEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPLS-C 70

Query: 92  TEFWSFMEKCNNNGNPETLYRKGMLEFFT--HCREASGMTYLKMSAQKGYSEACYVYGII 151
            +    M+KC  N NP+  Y KG++ +F   HC     + ++ ++A  G  EA Y+Y ++
Sbjct: 71  RKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHC--DVDLHHIGIAANGGQKEAIYMYAML 130

Query: 152 LYATSMEDEGVKFLKICE 168
           L      +EG  ++   E
Sbjct: 131 LLCRGRTEEGKTYMSQLE 145

[Close]
BLAST of CmaCh04G013100 vs. TrEMBL
Match: A0A0A0LS96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025065 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 5.5e-87
Identity = 165/255 (64.71%), Postives = 199/255 (78.04%), Query Frame = 1 

Query: 6   KRKSQALGSQISRKTKTARLSA-SPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKK 65
           KR S AL +QISR T+  ++   SP  I+SLPNDLL E+LAKVA SSY DL+QAKLATK 
Sbjct: 7   KRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLATKH 66

Query: 66  FLEASSHNYIFQHASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCRE 125
           FLEAS+  YIFQH SL NF  LLWNNS +FWSFME CNN+ NPE+LYRKGMLEFFTHC+E
Sbjct: 67  FLEASNDRYIFQHVSLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFFTHCKE 126

Query: 126 ASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRRVKEF 185
           ASGM YLK SAQKGY +ACYV+G+ILYA++++DEG++FLK  E KLG K+ ECR+RVKEF
Sbjct: 127 ASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRVKEF 186

Query: 186 VRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEACKWN 245
           V ++W+KNKIS+ E  S+  R C+  I   C+ N +   WD  DED+YYG+ TCE CKWN
Sbjct: 187 VSYIWIKNKISLSEGDSSYGRKCDKNIN--CRVNEKINVWDSKDEDDYYGKYTCEECKWN 246

Query: 246 GEVLRFCNMLRTGSY 260
            EVLRFC MLRTG +
Sbjct: 247 NEVLRFCKMLRTGRF 259

[Close]
BLAST of CmaCh04G013100 vs. TrEMBL
Match: A5AV49_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039291 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.5e-36
Identity = 98/248 (39.52%), Postives = 141/248 (56.85%), Query Frame = 1 

Query: 19  KTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQHA 78
           K K  + ++    IESL +DLLIE+L +VA+SS+TDL  AKL+ + FLEAS   ++ ++ 
Sbjct: 2   KFKKTKRNSYGSTIESLSSDLLIEVLTRVASSSFTDLFNAKLSCRNFLEASKDTFVMKNI 61

Query: 79  SLENFHKL-LWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMTYLKMSAQK 138
           S+E F  +  W    E  SF++ C  +GNPE LYR+GM+EFF+  +  S   YLK + + 
Sbjct: 62  SIEKFPTIPWWQVKDEVSSFLKACKESGNPEVLYRQGMMEFFSWKKVESXEEYLKRAMEM 121

Query: 139 GYSEACYVYGIILY---ATSMEDEGVKFLKICEEKLGFKLAECRRRVKEFVRHLWVKNKI 198
           G+ EA YVYGIIL      S E++G+K L     K   KL ECR+R + F   +W++N I
Sbjct: 122 GHMEASYVYGIILLCKGGDSNEEQGMKLLNAV--KKSRKLGECRKRTRAFTLSMWIRNPI 181

Query: 199 SVQEKYSNDRRGCENVIKNCCKKNVRRI----GWDW--NDEDNYYGE-NTCEACKWNGEV 256
              ++ ++           C ++N   I    GW W  +DED    E N CEAC W+ EV
Sbjct: 182 VKCQELTSYH------ANTCGRRNNGGIGGKRGWPWIEDDEDKDVEEVNYCEACIWDDEV 241

[Close]
BLAST of CmaCh04G013100 vs. TrEMBL
Match: B9I6Z5_POPTR (F-box family protein OS=Populus trichocarpa GN=POPTR_0013s01020g PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.4e-34
Identity = 93/249 (37.35%), Postives = 141/249 (56.63%), Query Frame = 1 

Query: 20  TKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQHAS 79
           TK  R ++     +  P DLL E+LA+VA++S +DL  AKL+ K+FLEA+S NYIF+H +
Sbjct: 2   TKGRRKTSRHEFFKYFPKDLLTEVLARVASASISDLFTAKLSCKEFLEAASENYIFEHIT 61

Query: 80  LENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMTYLKMSAQKGY 139
           +E    + W  S    SF+ +C  NGNPE L+R+GM+EFF+  +  SG  +LK +A+KG+
Sbjct: 62  IEKLPVIPWRISHGASSFLARCKENGNPEALFRQGMVEFFSSNKPESGFQHLKNAARKGH 121

Query: 140 SEACYVYGIIL--YATSMEDEGVKFLKICE--EKLGFKLAECRRRVKEFVRHLWVKNK-- 199
            EA Y  G+IL  +    + EG++ L   +  +     + ECR ++KE ++ +W+  +  
Sbjct: 122 VEAIYTCGVILVCHGGQFKQEGIELLSSLKNYKSRHRTIKECRDKIKEILQSMWIDRREA 181

Query: 200 -ISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEACKWNGEVLRFCN 259
            I  +E  S+ R  C     NC K N R     W DE+ Y    TC+ C W+ E   FC 
Sbjct: 182 GIGPEEPKSHGRT-C-----NCSKFNKR----GWIDEEEY---TTCDYCVWDHEATLFCK 237

Query: 260 MLRTGSYDI 262
           +LR   + I
Sbjct: 242 ILRARGFGI 237

[Close]
BLAST of CmaCh04G013100 vs. TrEMBL
Match: A0A0B2P0Z6_GLYSO (Putative F-box protein OS=Glycine soja GN=glysoja_009836 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29
Identity = 84/233 (36.05%), Postives = 128/233 (54.94%), Query Frame = 1 

Query: 26  SASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQHASLENFH- 85
           S S   I+SLP +L +EI AKVA  S  D    KL  K+FL A+  +Y+++HAS+ENF  
Sbjct: 16  SVSVTTIKSLPKELQVEIFAKVATRSIFDHCMIKLCCKEFLHAAEDDYVYRHASMENFAL 75

Query: 86  -KLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMTYLKMSAQKGYSEAC 145
             L W    +  SF+++C  +GN E LYR+GML++FT  R   G+  LK +A +G+ +A 
Sbjct: 76  VPLPWFTGNKESSFLKRCRESGNSEILYREGMLQYFTSSRVELGLKNLKEAALEGHDDAK 135

Query: 146 YVYGIILYATSMEDEGVK---FLKICEEKLGFKLAECRRRVKEFVRHLWVKNKISVQEKY 205
           YVY ++L     EDEG +   F   C  K    +  CR+RVK FVR +W+KNK + +  +
Sbjct: 136 YVYCMLLMCG--EDEGQRKQGFDLFCSLKESTSVIRCRKRVKSFVRSMWLKNKPNGKSSF 195

Query: 206 SNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEACKWNGEVLRFCNM 254
                        C  +  +++   W+  ++  G  +C+ C  + E+  FCNM
Sbjct: 196 CGS--------GTCDSERQKQLSKRWSSFEDKDGGISCQRCGADHELGFFCNM 238

[Close]
BLAST of CmaCh04G013100 vs. TrEMBL
Match: I1KMZ2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G247800 PE=4 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-29
Identity = 84/233 (36.05%), Postives = 128/233 (54.94%), Query Frame = 1 

Query: 26  SASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQHASLENFH- 85
           S S   I+SLP +L +EI AKVA  S  D    KL  K+FL A+  +Y+++HAS+ENF  
Sbjct: 16  SVSVTTIKSLPKELQVEIFAKVATRSIFDHCMIKLCCKEFLHAAEDDYVYRHASMENFAL 75

Query: 86  -KLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMTYLKMSAQKGYSEAC 145
             L W    +  SF+++C  +GN E LYR+GML++FT  R   G+  LK +A +G+ +A 
Sbjct: 76  VPLPWFTGNKESSFLKRCRESGNSEILYREGMLQYFTSSRVELGLKNLKEAALEGHDDAK 135

Query: 146 YVYGIILYATSMEDEGVK---FLKICEEKLGFKLAECRRRVKEFVRHLWVKNKISVQEKY 205
           YVY ++L     EDEG +   F   C  K    +  CR+RVK FVR +W+KNK + +  +
Sbjct: 136 YVYCMLLMCG--EDEGQRKQGFDLFCSLKESTSVIRCRKRVKSFVRSMWLKNKPNGKSSF 195

Query: 206 SNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEACKWNGEVLRFCNM 254
                        C  +  +++   W+  ++  G  +C+ C  + E+  FCNM
Sbjct: 196 CGS--------GTCDSERQKQLSKRWSSFEDKDGGISCQRCGADHELGFFCNM 238

[Close]
BLAST of CmaCh04G013100 vs. TAIR10
Match: AT1G67623.1 (AT1G67623.1 F-box family protein)

HSP 1 Score: 85.5 bits (210), Expect = 5.4e-17
Identity = 68/231 (29.44%), Postives = 113/231 (48.92%), Query Frame = 1 

Query: 18  RKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQH 77
           RK+KT     +   ++SLP DLL+EI +   ASS + +   +L +K F       Y+F  
Sbjct: 14  RKSKTK----ASLCLDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYR 73

Query: 78  ASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMTYLKMSAQK 137
            SL+    L W+ ++    F+E+C  + NPE L++KG + +F    +  G+ YL  +A+K
Sbjct: 74  LSLKEIEFLPWHENSA--KFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEK 133

Query: 138 GYSEACYVYGIILYAT--SMEDEGVKFLKICEEKLGF----KLAECRRRVKEFVRH--LW 197
           G  EA YVYG+IL       + +G + L    ++L      +L E R ++++ +R+   W
Sbjct: 134 GIKEAKYVYGVILICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQK-IRYGFWW 193

Query: 198 VKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWD-WNDEDNYYGENTCE 240
             N +  Q K +     C+   K      V   GW  + DE +    + CE
Sbjct: 194 SDNTVVEQLKTAYVSEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACE 237

[Close]
BLAST of CmaCh04G013100 vs. TAIR10
Match: AT1G74875.1 (AT1G74875.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 74.7 bits (182), Expect = 9.5e-14
Identity = 48/157 (30.57%), Postives = 77/157 (49.04%), Query Frame = 1 

Query: 37  NDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQHASLENFHKLLWNNSTEFWS 96
           N   I ++  V +SS ++    +L +K F   S+  YI Q  SL     L W N  +F +
Sbjct: 17  NMFQIHLVINVLSSSLSEFRNLQLVSKSFKRISNDRYILQRLSLNKIPLLPWRNRKKFHN 76

Query: 97  FMEKCNNNGNPETLYRKGMLEFF---THCREAS-GMTYLKMSAQKGYSEACYVYGIILYA 156
           F ++C  +GN E +YRKG++++F   +H R+   G+ ++  +A  G  EA YVYG+IL  
Sbjct: 77  FFKRCRKSGNLEAIYRKGLVDYFHRDSHERQRDRGLKHIAKTANNGNQEAQYVYGLILIC 136

Query: 157 T--SMEDEGVKFLKICEEKLGFKLAECRRRVKEFVRH 188
                +  G K L    + L          +KE  +H
Sbjct: 137 LGGKTKQNGFKILSSLRKPLMLS-----NTIKEMEKH 168

[Close]
BLAST of CmaCh04G013100 vs. TAIR10
Match: AT2G35280.1 (AT2G35280.1 F-box family protein)

HSP 1 Score: 52.8 bits (125), Expect = 3.9e-07
Identity = 38/138 (27.54%), Postives = 68/138 (49.28%), Query Frame = 1 

Query: 32  IESLPNDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQHASLENFHKLLWNNS 91
           +E+LP DLL EI+AK+   S  D     L+ K+   +++   + +  +L    K   +  
Sbjct: 11  LEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPLS-C 70

Query: 92  TEFWSFMEKCNNNGNPETLYRKGMLEFFT--HCREASGMTYLKMSAQKGYSEACYVYGII 151
            +    M+KC  N NP+  Y KG++ +F   HC     + ++ ++A  G  EA Y+Y ++
Sbjct: 71  RKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHC--DVDLHHIGIAANGGQKEAIYMYAML 130

Query: 152 LYATSMEDEGVKFLKICE 168
           L      +EG  ++   E
Sbjct: 131 LLCRGRTEEGKTYMSQLE 145

[Close]
BLAST of CmaCh04G013100 vs. NCBI nr
Match: gi|449439561|ref|XP_004137554.1| (PREDICTED: putative F-box protein At1g67623 [Cucumis sativus])

HSP 1 Score: 328.9 bits (842), Expect = 7.9e-87
Identity = 165/255 (64.71%), Postives = 199/255 (78.04%), Query Frame = 1 

Query: 6   KRKSQALGSQISRKTKTARLSA-SPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKK 65
           KR S AL +QISR T+  ++   SP  I+SLPNDLL E+LAKVA SSY DL+QAKLATK 
Sbjct: 7   KRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLATKH 66

Query: 66  FLEASSHNYIFQHASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCRE 125
           FLEAS+  YIFQH SL NF  LLWNNS +FWSFME CNN+ NPE+LYRKGMLEFFTHC+E
Sbjct: 67  FLEASNDRYIFQHVSLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFFTHCKE 126

Query: 126 ASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRRVKEF 185
           ASGM YLK SAQKGY +ACYV+G+ILYA++++DEG++FLK  E KLG K+ ECR+RVKEF
Sbjct: 127 ASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRVKEF 186

Query: 186 VRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEACKWN 245
           V ++W+KNKIS+ E  S+  R C+  I   C+ N +   WD  DED+YYG+ TCE CKWN
Sbjct: 187 VSYIWIKNKISLSEGDSSYGRKCDKNIN--CRVNEKINVWDSKDEDDYYGKYTCEECKWN 246

Query: 246 GEVLRFCNMLRTGSY 260
            EVLRFC MLRTG +
Sbjct: 247 NEVLRFCKMLRTGRF 259

[Close]
BLAST of CmaCh04G013100 vs. NCBI nr
Match: gi|659107472|ref|XP_008453691.1| (PREDICTED: putative F-box protein At1g67623 [Cucumis melo])

HSP 1 Score: 326.2 bits (835), Expect = 5.2e-86
Identity = 167/260 (64.23%), Postives = 192/260 (73.85%), Query Frame = 1 

Query: 1   MAGSLKRKSQALGSQISRKTKTARLSA-SPPAIESLPNDLLIEILAKVAASSYTDLVQAK 60
           MA   K KS    + ISR T+  R    SP  I+SLPNDLL E+LAKVAASSY DLVQAK
Sbjct: 1   MANHPKTKSLPFHTLISRTTQKNRTGVLSPTVIKSLPNDLLTEVLAKVAASSYVDLVQAK 60

Query: 61  LATKKFLEASSHNYIFQHASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFF 120
           LATK+FLEAS   YIFQH SL NF   LWNNS EFWSF+E CNNN NPE+LYRKGMLEFF
Sbjct: 61  LATKQFLEASKDRYIFQHVSLGNFENHLWNNSPEFWSFIETCNNNENPESLYRKGMLEFF 120

Query: 121 THCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRR 180
           THC+EASG+ YLK+SAQKGY +ACYV  +ILYA+  +DEG +FLK  E KL  K+AECR 
Sbjct: 121 THCKEASGLAYLKLSAQKGYVDACYVCSVILYASKAKDEGFEFLKNHEAKLRNKMAECRW 180

Query: 181 RVKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCE 240
           RVK FV +LW+KN+IS   +  NDR+  +N+    C+ N RR  WDW DED+YYGE TCE
Sbjct: 181 RVKRFVSYLWIKNRISSSGEDPNDRKCDKNI---NCRVNERRNSWDWKDEDDYYGEYTCE 240

Query: 241 ACKWNGEVLRFCNMLRTGSY 260
            CKWN EV RFC MLRTG Y
Sbjct: 241 KCKWNNEVFRFCKMLRTGRY 257

[Close]
BLAST of CmaCh04G013100 vs. NCBI nr
Match: gi|449435498|ref|XP_004135532.1| (PREDICTED: putative F-box protein At1g67623 [Cucumis sativus])

HSP 1 Score: 321.6 bits (823), Expect = 1.3e-84
Identity = 165/262 (62.98%), Postives = 199/262 (75.95%), Query Frame = 1 

Query: 1   MAGSLKRKSQ-ALGSQISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAK 60
           MA  LKRKS+ +  SQIS +TK      S   I SLPNDLLIE+LAKVAASSY DLVQAK
Sbjct: 1   MANQLKRKSEPSFNSQISTRTKKMCRPFSSSLIVSLPNDLLIEVLAKVAASSYIDLVQAK 60

Query: 61  LATKKFLEASSHNYIFQHASLEN--FHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLE 120
           LATK FL AS+  YIFQH SLEN  F  LLWNN+ +  SFME  NNN NPE+LYRKG +E
Sbjct: 61  LATKLFLHASNDGYIFQHVSLENKSFRNLLWNNTPQSRSFMETLNNNENPESLYRKGTME 120

Query: 121 FFTHCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAEC 180
           FF+H +EASG++YLK SAQKGY +ACYVYG+++YA ++++EGV++LK+CE KLG K+AEC
Sbjct: 121 FFSHGKEASGLSYLKQSAQKGYVDACYVYGVVMYAANLKEEGVEYLKMCEAKLGNKMAEC 180

Query: 181 RRRVKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENT 240
           RRRVKEFV + W+KN+IS+ ++       C NV    CK N R  GWDW DED+YYGE+T
Sbjct: 181 RRRVKEFVWYFWIKNRISMSKEI------CSNV---NCKVNERSNGWDWKDEDDYYGEHT 240

Query: 241 CEACKWNGEVLRFCNMLRTGSY 260
           CE CKW+ EVLRFCNMLR G Y
Sbjct: 241 CEQCKWSNEVLRFCNMLRRGGY 253

[Close]
BLAST of CmaCh04G013100 vs. NCBI nr
Match: gi|731376767|ref|XP_010656578.1| (PREDICTED: putative F-box protein At1g67623 [Vitis vinifera])

HSP 1 Score: 162.2 bits (409), Expect = 1.3e-36
Identity = 100/252 (39.68%), Postives = 139/252 (55.16%), Query Frame = 1 

Query: 19  KTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQHA 78
           K K  + ++    IE LP+DLLIE+L +VA SS+TDL  AKL+ + FLEAS   +I ++ 
Sbjct: 2   KFKKTKRNSHGSTIEYLPSDLLIEVLTRVATSSFTDLFNAKLSCRNFLEASDDKFIMKNI 61

Query: 79  SLENFHKL-LWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMTYLKMSAQK 138
           S+E F  +  W    E  SF++ C  +GNPE LYR+GM+EFF+  +  SG  YLK + + 
Sbjct: 62  SIEKFPAIPWWQVKDEVSSFLKACKESGNPEALYRQGMMEFFSWKKVESGEEYLKRALEM 121

Query: 139 GYSEACYVYGIILY---ATSMEDEGVKFLKICEEKLGFKLAECRRRVKEFVRHLWVKNKI 198
            + EA YVYGIIL      S E++G+K L     K   KL ECR++ K F+  +W++N I
Sbjct: 122 EHMEASYVYGIILLCKGGESNEEQGMKLLNAV--KKSRKLGECRKKTKAFILSMWIRNPI 181

Query: 199 SVQEKYSNDRRGCENVIKNCCKKNVRRIG-----WDWND--EDNYYGE----NTCEACKW 256
              ++  N         K C ++N   IG     W W D  EDN   +    N CE C W
Sbjct: 182 VKCQELVNHH------AKTCGRRNNGGIGGKRGWWQWIDDREDNEDKDVEEVNYCEGCMW 241

[Close]
BLAST of CmaCh04G013100 vs. NCBI nr
Match: gi|147773103|emb|CAN71689.1| (hypothetical protein VITISV_039291 [Vitis vinifera])

HSP 1 Score: 159.8 bits (403), Expect = 6.4e-36
Identity = 98/248 (39.52%), Postives = 141/248 (56.85%), Query Frame = 1 

Query: 19  KTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKLATKKFLEASSHNYIFQHA 78
           K K  + ++    IESL +DLLIE+L +VA+SS+TDL  AKL+ + FLEAS   ++ ++ 
Sbjct: 2   KFKKTKRNSYGSTIESLSSDLLIEVLTRVASSSFTDLFNAKLSCRNFLEASKDTFVMKNI 61

Query: 79  SLENFHKL-LWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMTYLKMSAQK 138
           S+E F  +  W    E  SF++ C  +GNPE LYR+GM+EFF+  +  S   YLK + + 
Sbjct: 62  SIEKFPTIPWWQVKDEVSSFLKACKESGNPEVLYRQGMMEFFSWKKVESXEEYLKRAMEM 121

Query: 139 GYSEACYVYGIILY---ATSMEDEGVKFLKICEEKLGFKLAECRRRVKEFVRHLWVKNKI 198
           G+ EA YVYGIIL      S E++G+K L     K   KL ECR+R + F   +W++N I
Sbjct: 122 GHMEASYVYGIILLCKGGDSNEEQGMKLLNAV--KKSRKLGECRKRTRAFTLSMWIRNPI 181

Query: 199 SVQEKYSNDRRGCENVIKNCCKKNVRRI----GWDW--NDEDNYYGE-NTCEACKWNGEV 256
              ++ ++           C ++N   I    GW W  +DED    E N CEAC W+ EV
Sbjct: 182 VKCQELTSYH------ANTCGRRNNGGIGGKRGWPWIEDDEDKDVEEVNYCEACIWDDEV 241

The following BLAST results are available for this feature:
BLAST of CmaCh04G013100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FB79_ARATH9.6e-1629.44Putative F-box protein At1g67623 OS=Arabidopsis thaliana GN=At1g67623 PE=3 SV=1[more]
FB127_ARATH6.9e-0627.54F-box protein At2g35280 OS=Arabidopsis thaliana GN=At2g35280 PE=2 SV=1[more]
BLAST of CmaCh04G013100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LS96_CUCSA5.5e-8764.71Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025065 PE=4 SV=1[more]
A5AV49_VITVI4.5e-3639.52Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039291 PE=4 SV=1[more]
B9I6Z5_POPTR1.4e-3437.35F-box family protein OS=Populus trichocarpa GN=POPTR_0013s01020g PE=4 SV=1[more]
A0A0B2P0Z6_GLYSO1.4e-2936.05Putative F-box protein OS=Glycine soja GN=glysoja_009836 PE=4 SV=1[more]
I1KMZ2_SOYBN1.4e-2936.05Uncharacterized protein OS=Glycine max GN=GLYMA_07G247800 PE=4 SV=2[more]
BLAST of CmaCh04G013100 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67623.15.4e-1729.44 F-box family protein[more]
AT1G74875.19.5e-1430.57 FUNCTIONS IN: molecular_function unknown[more]
AT2G35280.13.9e-0727.54 F-box family protein[more]
BLAST of CmaCh04G013100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439561|ref|XP_004137554.1|7.9e-8764.71PREDICTED: putative F-box protein At1g67623 [Cucumis sativus][more]
gi|659107472|ref|XP_008453691.1|5.2e-8664.23PREDICTED: putative F-box protein At1g67623 [Cucumis melo][more]
gi|449435498|ref|XP_004135532.1|1.3e-8462.98PREDICTED: putative F-box protein At1g67623 [Cucumis sativus][more]
gi|731376767|ref|XP_010656578.1|1.3e-3639.68PREDICTED: putative F-box protein At1g67623 [Vitis vinifera][more]
gi|147773103|emb|CAN71689.1|6.4e-3639.52hypothetical protein VITISV_039291 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G013100.1CmaCh04G013100.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 102..161
score: 2.
NoneNo IPR availablePANTHERPTHR33784FAMILY NOT NAMEDcoord: 17..259
score: 8.1
NoneNo IPR availablePANTHERPTHR33784:SF4SUBFAMILY NOT NAMEDcoord: 17..259
score: 8.1
NoneNo IPR availableunknownSSF81901HCP-likecoord: 60..166
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G013100Wax gourdcmawgoB0892
CmaCh04G013100Cucurbita maxima (Rimu)cmacmaB402
CmaCh04G013100Cucumber (Gy14) v1cgycmaB0127
CmaCh04G013100Cucurbita moschata (Rifu)cmacmoB706
CmaCh04G013100Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G013100Wild cucumber (PI 183967)cmacpiB733
CmaCh04G013100Cucumber (Chinese Long) v2cmacuB726
CmaCh04G013100Melon (DHL92) v3.5.1cmameB652
CmaCh04G013100Watermelon (Charleston Gray)cmawcgB621
CmaCh04G013100Watermelon (97103) v1cmawmB728
CmaCh04G013100Cucurbita pepo (Zucchini)cmacpeB700
CmaCh04G013100Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G013100Bottle gourd (USVL1VR-Ls)cmalsiB676
CmaCh04G013100Cucumber (Gy14) v2cgybcmaB650
CmaCh04G013100Melon (DHL92) v3.6.1cmamedB739
CmaCh04G013100Silver-seed gourdcarcmaB1015
CmaCh04G013100Silver-seed gourdcarcmaB1170
CmaCh04G013100Cucumber (Chinese Long) v3cmacucB0863
CmaCh04G013100Watermelon (97103) v2cmawmbB725