CmaCh04G011480 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G011480
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	17.4 kDa class I heat shock family protein
Location	Cma_Chr04 : 5892238 .. 5892780 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTTACCCAATTGGTCCAGAAGATTTTGGAATTTTCTACGCATCAATTTTGAACCAAAATTCAAAAAGGGGAACGAAAACACCAGAAGACCCACGAAATATCTCAAAATTCCAAGATTTTTGGGTGGGCGTGGGAGCAACAACTCGGACCCCATGTCATTGTCATTGGATGTTTGGGATCCATTTGATCGGGAGACATCTGCTATGGCCAACGCCCGCATCGACTGGAAGGAGACCCCAGAAGCCCACATCTTCAAGGCCGATCTTCCTGGGATGAAGAAGGAGGAAGTGAAAGTAGAAGTTGAAGAAGGCAGAGTTCTGCAGATCAGTGGAGAAAGAAGCAAAGAGAAGGAGGAGAAGAATGATAAATGGCACAGAGTCGAACGAAGCAGTGGGAAGTTCGTGAGGAGATTCAGGCTGCCGGAGAACGCTAAAGTTGAAGAGGTGAAGGCTAGCATCGAAAATGGAGTTCTCACTGTGAGGGTGCCTAAGACGAAAGAGAAGAAGCCTGAAATCAGATCCATTGAAATCTCAGGCTAA

mRNA sequence

ATGAACTTACCCAATTGGTCCAGAAGATTTTGGAATTTTCTACGCATCAATTTTGAACCAAAATTCAAAAAGGGGAACGAAAACACCAGAAGACCCACGAAATATCTCAAAATTCCAAGATTTTTGGGTGGGCGTGGGAGCAACAACTCGGACCCCATGTCATTGTCATTGGATGTTTGGGATCCATTTGATCGGGAGACATCTGCTATGGCCAACGCCCGCATCGACTGGAAGGAGACCCCAGAAGCCCACATCTTCAAGGCCGATCTTCCTGGGATGAAGAAGGAGGAAGTGAAAGTAGAAGTTGAAGAAGGCAGAGTTCTGCAGATCAGTGGAGAAAGAAGCAAAGAGAAGGAGGAGAAGAATGATAAATGGCACAGAGTCGAACGAAGCAGTGGGAAGTTCGTGAGGAGATTCAGGCTGCCGGAGAACGCTAAAGTTGAAGAGGTGAAGGCTAGCATCGAAAATGGAGTTCTCACTGTGAGGGTGCCTAAGACGAAAGAGAAGAAGCCTGAAATCAGATCCATTGAAATCTCAGGCTAA

Coding sequence (CDS)

ATGAACTTACCCAATTGGTCCAGAAGATTTTGGAATTTTCTACGCATCAATTTTGAACCAAAATTCAAAAAGGGGAACGAAAACACCAGAAGACCCACGAAATATCTCAAAATTCCAAGATTTTTGGGTGGGCGTGGGAGCAACAACTCGGACCCCATGTCATTGTCATTGGATGTTTGGGATCCATTTGATCGGGAGACATCTGCTATGGCCAACGCCCGCATCGACTGGAAGGAGACCCCAGAAGCCCACATCTTCAAGGCCGATCTTCCTGGGATGAAGAAGGAGGAAGTGAAAGTAGAAGTTGAAGAAGGCAGAGTTCTGCAGATCAGTGGAGAAAGAAGCAAAGAGAAGGAGGAGAAGAATGATAAATGGCACAGAGTCGAACGAAGCAGTGGGAAGTTCGTGAGGAGATTCAGGCTGCCGGAGAACGCTAAAGTTGAAGAGGTGAAGGCTAGCATCGAAAATGGAGTTCTCACTGTGAGGGTGCCTAAGACGAAAGAGAAGAAGCCTGAAATCAGATCCATTGAAATCTCAGGCTAA

Protein sequence

MNLPNWSRRFWNFLRINFEPKFKKGNENTRRPTKYLKIPRFLGGRGSNNSDPMSLSLDVWDPFDRETSAMANARIDWKETPEAHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG

Homology

[Close]

BLAST of CmaCh04G011480 vs. Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.3e-53
Identity = 108/156 (69.23%), Postives = 126/156 (80.77%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD-------------RETSAMANARIDWKETPEAH 97
           IP F GGR SN  DP SL  DVWDPF              +ET+A  N  IDWKETP+AH
Sbjct: 4   IPSFFGGRRSNVFDPFSL--DVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQAH 63

Query: 98  IFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPEN 157
           +FKADLPG+KKEEVKVE+EEG+VLQISGER+KEKEEKNDKWHRVERSSGKF+RRFRLPEN
Sbjct: 64  VFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPEN 123

Query: 158 AKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           AKV+EVKA++ NGV+TV VPK + KKPE+++I+ISG
Sbjct: 124 AKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

[Close]

BLAST of CmaCh04G011480 vs. Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 3.3e-52
Identity = 107/158 (67.72%), Postives = 124/158 (78.48%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD---------------RETSAMANARIDWKETPE 97
           IP   GGR SN  DP S   D+WDPF+               R+ +A  NAR+DWKETPE
Sbjct: 4   IPSIFGGRRSNVFDPFSQ--DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETPE 63

Query: 98  AHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLP 157
           AH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKNDKWHRVER+SGKF+RRFRLP
Sbjct: 64  AHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLP 123

Query: 158 ENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           ENAK+EEVKA++ENGVLTV VPK  EKKP+++SI+ISG
Sbjct: 124 ENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmaCh04G011480 vs. Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 205.7 bits (522), Expect = 4.3e-52
Identity = 102/155 (65.81%), Postives = 125/155 (80.65%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD------------RETSAMANARIDWKETPEAHI 97
           +P F GGR +N  DP SL  DVWDPF+            ++ +A  NA++DW+ETPEAH+
Sbjct: 4   VPSFFGGRRTNVFDPFSL--DVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAHV 63

Query: 98  FKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPENA 157
           FKAD+PG+KKEEVKVEVE+G +LQISGERS E EEK+D WHRVERSSGKF+RRFRLPENA
Sbjct: 64  FKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENA 123

Query: 158 KVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           KVEEVKAS+ENGVL+V VPK +E KPE++S++ISG
Sbjct: 124 KVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of CmaCh04G011480 vs. Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 4.3e-52
Identity = 106/157 (67.52%), Postives = 125/157 (79.62%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD--------------RETSAMANARIDWKETPEA 97
           IP F GGR SN  DP SL  DVWDPF               RE SA  + R+DWKETPEA
Sbjct: 4   IPSFFGGRRSNVFDPFSL--DVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEA 63

Query: 98  HIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPE 157
           H+FKADLPGMKKEEVKVE+E+ RVLQISGERS EKE+KND+WHR+ERSSGKF+RRFRLPE
Sbjct: 64  HVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPE 123

Query: 158 NAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           NAK+++VKA++ENGVLTV VPK + KKPE+++I+ISG
Sbjct: 124 NAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of CmaCh04G011480 vs. Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 9.6e-52
Identity = 107/158 (67.72%), Postives = 123/158 (77.85%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD---------------RETSAMANARIDWKETPE 97
           IP F G R SN  +P SL  D+WDPF                +ET+A AN  IDWKETP+
Sbjct: 4   IPSFFGSRRSNVLNPFSL--DIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWKETPQ 63

Query: 98  AHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLP 157
           AH+FKADLPG+KKEEVKVEVEEG+VLQISGER+KEKEEKN+KWHRVE SSGKF+RRFRLP
Sbjct: 64  AHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLP 123

Query: 158 ENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           ENA V+EVKA +ENGVLTV VPK + KKPE++SI ISG
Sbjct: 124 ENANVDEVKAGMENGVLTVTVPKVEMKKPEVKSIHISG 159

[Close]

BLAST of CmaCh04G011480 vs. TrEMBL
Match: B9T5S1_RICCO (Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0450640 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.2e-55
Identity = 116/155 (74.84%), Postives = 130/155 (83.87%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD------------RETSAMANARIDWKETPEAHI 97
           IP   G R +N  DP SL  D+WDPFD            RETSA+ANARIDWKETPEAHI
Sbjct: 4   IPSIFGSRRTNVFDPFSL--DLWDPFDGLFNSANLPASARETSALANARIDWKETPEAHI 63

Query: 98  FKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPENA 157
           FKAD+PG+KKEEVKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF RRFRLPENA
Sbjct: 64  FKADVPGLKKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFFRRFRLPENA 123

Query: 158 KVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           K+EEVKAS+ENGVLTV VPK +EKKPE++S++ISG
Sbjct: 124 KMEEVKASMENGVLTVTVPKEEEKKPEVKSVQISG 156

[Close]

BLAST of CmaCh04G011480 vs. TrEMBL
Match: B9T5S2_RICCO (Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0450650 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.8e-55
Identity = 115/155 (74.19%), Postives = 130/155 (83.87%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD------------RETSAMANARIDWKETPEAHI 97
           IP   G R +N  DP SL  D WDPFD            RETSA+ANARIDWKETPEAHI
Sbjct: 4   IPSIFGSRRTNVVDPFSL--DRWDPFDSLFNSANLPASARETSALANARIDWKETPEAHI 63

Query: 98  FKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPENA 157
           FKAD+PG+KKEEVKVE+EEGR+LQISGERSKE+EEKND+WHRVERSSGKF+RRFRLPENA
Sbjct: 64  FKADVPGLKKEEVKVEIEEGRILQISGERSKEQEEKNDRWHRVERSSGKFLRRFRLPENA 123

Query: 158 KVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           K+EEVKAS+ENGVLTV VPK KEKKPE++S++ISG
Sbjct: 124 KMEEVKASMENGVLTVTVPKEKEKKPEVKSVQISG 156

[Close]

BLAST of CmaCh04G011480 vs. TrEMBL
Match: H6TB42_CITLA (HSP18.1A OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 3.8e-55
Identity = 118/158 (74.68%), Postives = 128/158 (81.01%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD---------------RETSAMANARIDWKETPE 97
           IP   GGR SN  DP SL  DVWDPF+               RETSA AN RIDWKETP+
Sbjct: 4   IPTIFGGRRSNVFDPFSL--DVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETPQ 63

Query: 98  AHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLP 157
           AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKF+RRFRLP
Sbjct: 64  AHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRLP 123

Query: 158 ENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           ENAK EEVKAS+ENGVLTV VPK +EKKPE++SI+ISG
Sbjct: 124 ENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

[Close]

BLAST of CmaCh04G011480 vs. TrEMBL
Match: V4SLT9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029467mg PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 4.9e-55
Identity = 115/157 (73.25%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD--------------RETSAMANARIDWKETPEA 97
           IP   GGR +N  DP+SL  DVWDPFD              RETS  ANARIDWKETP+A
Sbjct: 4   IPSIFGGRRTNVFDPVSL--DVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQA 63

Query: 98  HIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPE 157
           H+FKADLPG++KEEVKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF+RRFRLP+
Sbjct: 64  HVFKADLPGLRKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPD 123

Query: 158 NAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           NAKVE+VKAS+ENGVLTV VPK +EKKPE+++IEISG
Sbjct: 124 NAKVEQVKASMENGVLTVTVPKQEEKKPEVKAIEISG 158

[Close]

BLAST of CmaCh04G011480 vs. TrEMBL
Match: A0A0A0KLU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 8.4e-55
Identity = 116/158 (73.42%), Postives = 129/158 (81.65%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD---------------RETSAMANARIDWKETPE 97
           +P   GGR SN  DP SL  D+WDPF+               RETSA AN RIDWKETP+
Sbjct: 4   VPSIFGGRRSNVFDPFSL--DIWDPFEGFPFSNSLANAPSSARETSAFANTRIDWKETPQ 63

Query: 98  AHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLP 157
           AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE+EEKNDKWHR+ERS GKF+RRFRLP
Sbjct: 64  AHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRRFRLP 123

Query: 158 ENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           ENAKVEEVKAS+ENGVLTV VPK +EKKPEI+SI+I+G
Sbjct: 124 ENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of CmaCh04G011480 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-53
Identity = 107/158 (67.72%), Postives = 124/158 (78.48%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD---------------RETSAMANARIDWKETPE 97
           IP   GGR SN  DP S   D+WDPF+               R+ +A  NAR+DWKETPE
Sbjct: 4   IPSIFGGRRSNVFDPFSQ--DLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETPE 63

Query: 98  AHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLP 157
           AH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKNDKWHRVER+SGKF+RRFRLP
Sbjct: 64  AHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLP 123

Query: 158 ENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           ENAK+EEVKA++ENGVLTV VPK  EKKP+++SI+ISG
Sbjct: 124 ENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmaCh04G011480 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 205.7 bits (522), Expect = 2.4e-53
Identity = 102/155 (65.81%), Postives = 125/155 (80.65%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD------------RETSAMANARIDWKETPEAHI 97
           +P F GGR +N  DP SL  DVWDPF+            ++ +A  NA++DW+ETPEAH+
Sbjct: 4   VPSFFGGRRTNVFDPFSL--DVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAHV 63

Query: 98  FKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPENA 157
           FKAD+PG+KKEEVKVEVE+G +LQISGERS E EEK+D WHRVERSSGKF+RRFRLPENA
Sbjct: 64  FKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENA 123

Query: 158 KVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           KVEEVKAS+ENGVL+V VPK +E KPE++S++ISG
Sbjct: 124 KVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of CmaCh04G011480 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 202.2 bits (513), Expect = 2.7e-52
Identity = 103/156 (66.03%), Postives = 123/156 (78.85%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD-------------RETSAMANARIDWKETPEAH 97
           IP   GGR +N  DP SL  DV+DPF+              + +A  NA++DW+ETPEAH
Sbjct: 4   IPSIFGGRRTNVFDPFSL--DVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAH 63

Query: 98  IFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPEN 157
           +FKADLPG++KEEVKVEVE+G +LQISGERS E EEKNDKWHRVERSSGKF RRFRLPEN
Sbjct: 64  VFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPEN 123

Query: 158 AKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           AK+EE+KAS+ENGVL+V VPK  EKKPE++SI+ISG
Sbjct: 124 AKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of CmaCh04G011480 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 190.7 bits (483), Expect = 8.1e-49
Identity = 100/152 (65.79%), Postives = 119/152 (78.29%), Query Frame = 1


Query: 38  IPRFLGG-RGSNNSDPMSLSLDVWDPF--------DRETSAMANARIDWKETPEAHIFKA 97
           IP F    R SN  DP SL  DVWDPF         RE SA+ NAR+DW+ETPEAH+FKA
Sbjct: 4   IPSFFNNNRRSNIFDPFSL--DVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFKA 63

Query: 98  DLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPENAKVE 157
           DLPG+KKEEVKVE+EE  VL+ISGER  EKE+KND WHRVERSSG+F RRFRLPEN K++
Sbjct: 64  DLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMD 123

Query: 158 EVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           +VKA++ENGVLTV VPK + KK +++SI+ISG
Sbjct: 124 QVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of CmaCh04G011480 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 184.9 bits (468), Expect = 4.4e-47
Identity = 98/154 (63.64%), Postives = 117/154 (75.97%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFDR---------ETSAMANARIDWKETPEAHIFKA 97
           IP F G    +NS     SLDVWDPF           ETSA+ NAR+DWKET EAH+FKA
Sbjct: 4   IPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHVFKA 63

Query: 98  DLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPENAKVE 157
           DLPGMKKEEVKVE+E+  VL+ISGER  EKEEK D WHRVERSSG+F R+F+LPEN K++
Sbjct: 64  DLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMD 123

Query: 158 EVKASIENGVLTVRVPKTKE--KKPEIRSIEISG 181
           +VKAS+ENGVLTV VPK +E  KK +++SI+ISG
Sbjct: 124 QVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]

BLAST of CmaCh04G011480 vs. NCBI nr
Match: gi|255585824|ref|XP_002533590.1| (PREDICTED: 18.1 kDa class I heat shock protein [Ricinus communis])

HSP 1 Score: 223.4 bits (568), Expect = 3.2e-55
Identity = 116/155 (74.84%), Postives = 130/155 (83.87%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD------------RETSAMANARIDWKETPEAHI 97
           IP   G R +N  DP SL  D+WDPFD            RETSA+ANARIDWKETPEAHI
Sbjct: 4   IPSIFGSRRTNVFDPFSL--DLWDPFDGLFNSANLPASARETSALANARIDWKETPEAHI 63

Query: 98  FKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPENA 157
           FKAD+PG+KKEEVKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF RRFRLPENA
Sbjct: 64  FKADVPGLKKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFFRRFRLPENA 123

Query: 158 KVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           K+EEVKAS+ENGVLTV VPK +EKKPE++S++ISG
Sbjct: 124 KMEEVKASMENGVLTVTVPKEEEKKPEVKSVQISG 156

[Close]

BLAST of CmaCh04G011480 vs. NCBI nr
Match: gi|659126469|ref|XP_008463198.1| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 222.6 bits (566), Expect = 5.4e-55
Identity = 117/158 (74.05%), Postives = 130/158 (82.28%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD---------------RETSAMANARIDWKETPE 97
           IP   GGR SN  DP SL  D+WDPF+               RETSA AN RIDWKETP+
Sbjct: 4   IPSIFGGRRSNVFDPFSL--DIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETPQ 63

Query: 98  AHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLP 157
           AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE+EEKNDKWHR+ERSSGKF+RRFRLP
Sbjct: 64  AHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRLP 123

Query: 158 ENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           ENAKVEEVKA++ENGVLTV VPK +EKKPEI+SI+I+G
Sbjct: 124 ENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of CmaCh04G011480 vs. NCBI nr
Match: gi|315932718|gb|ADU55789.1| (HSP18.1A [Citrullus lanatus])

HSP 1 Score: 222.6 bits (566), Expect = 5.4e-55
Identity = 118/158 (74.68%), Postives = 128/158 (81.01%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD---------------RETSAMANARIDWKETPE 97
           IP   GGR SN  DP SL  DVWDPF+               RETSA AN RIDWKETP+
Sbjct: 4   IPTIFGGRRSNVFDPFSL--DVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETPQ 63

Query: 98  AHIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLP 157
           AHIFKADLPG+KKEEVKVEVEEGRVLQISGERSKE EEKNDKWHR+ERSSGKF+RRFRLP
Sbjct: 64  AHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRLP 123

Query: 158 ENAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           ENAK EEVKAS+ENGVLTV VPK +EKKPE++SI+ISG
Sbjct: 124 ENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

[Close]

BLAST of CmaCh04G011480 vs. NCBI nr
Match: gi|1000938865|ref|XP_015583500.1| (PREDICTED: 18.1 kDa class I heat shock protein [Ricinus communis])

HSP 1 Score: 222.6 bits (566), Expect = 5.4e-55
Identity = 115/155 (74.19%), Postives = 130/155 (83.87%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD------------RETSAMANARIDWKETPEAHI 97
           IP   G R +N  DP SL  D WDPFD            RETSA+ANARIDWKETPEAHI
Sbjct: 4   IPSIFGSRRTNVVDPFSL--DRWDPFDSLFNSANLPASARETSALANARIDWKETPEAHI 63

Query: 98  FKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPENA 157
           FKAD+PG+KKEEVKVE+EEGR+LQISGERSKE+EEKND+WHRVERSSGKF+RRFRLPENA
Sbjct: 64  FKADVPGLKKEEVKVEIEEGRILQISGERSKEQEEKNDRWHRVERSSGKFLRRFRLPENA 123

Query: 158 KVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           K+EEVKAS+ENGVLTV VPK KEKKPE++S++ISG
Sbjct: 124 KMEEVKASMENGVLTVTVPKEKEKKPEVKSVQISG 156

[Close]

BLAST of CmaCh04G011480 vs. NCBI nr
Match: gi|567864324|ref|XP_006424811.1| (hypothetical protein CICLE_v10029467mg [Citrus clementina])

HSP 1 Score: 222.2 bits (565), Expect = 7.1e-55
Identity = 115/157 (73.25%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 38  IPRFLGGRGSNNSDPMSLSLDVWDPFD--------------RETSAMANARIDWKETPEA 97
           IP   GGR +N  DP+SL  DVWDPFD              RETS  ANARIDWKETP+A
Sbjct: 4   IPSIFGGRRTNVFDPVSL--DVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQA 63

Query: 98  HIFKADLPGMKKEEVKVEVEEGRVLQISGERSKEKEEKNDKWHRVERSSGKFVRRFRLPE 157
           H+FKADLPG++KEEVKVEVEEGR+LQISGERSKE+EEKNDKWHRVERSSGKF+RRFRLP+
Sbjct: 64  HVFKADLPGLRKEEVKVEVEEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPD 123

Query: 158 NAKVEEVKASIENGVLTVRVPKTKEKKPEIRSIEISG 181
           NAKVE+VKAS+ENGVLTV VPK +EKKPE+++IEISG
Sbjct: 124 NAKVEQVKASMENGVLTVTVPKQEEKKPEVKAIEISG 158

The following BLAST results are available for this feature:

BLAST of CmaCh04G011480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP11_DAUCA	2.3e-53	69.23	17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1	[more]
HS181_ARATH	3.3e-52	67.72	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1	[more]
HSP17_ARATH	4.3e-52	65.81	17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=...	[more]
HSP12_MEDSA	4.3e-52	67.52	18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1	[more]
HSP12_DAUCA	9.6e-52	67.72	18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1	[more]

BLAST of CmaCh04G011480 vs. TrEMBL


Match Name	E-value	Identity	Description
B9T5S1_RICCO	2.2e-55	74.84	Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0450640 PE=3 SV=1	[more]
B9T5S2_RICCO	3.8e-55	74.19	Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0450650 PE=3 SV=1	[more]
H6TB42_CITLA	3.8e-55	74.68	HSP18.1A OS=Citrullus lanatus PE=2 SV=1	[more]
V4SLT9_9ROSI	4.9e-55	73.25	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029467mg PE=3 SV=1	[more]
A0A0A0KLU0_CUCSA	8.4e-55	73.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1	[more]

BLAST of CmaCh04G011480 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59720.1	1.9e-53	67.72	heat shock protein 18.2	[more]
AT3G46230.1	2.4e-53	65.81	heat shock protein 17.4	[more]
AT1G53540.1	2.7e-52	66.03	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	8.1e-49	65.79	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	4.4e-47	63.64	HSP20-like chaperones superfamily protein	[more]

BLAST of CmaCh04G011480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|255585824\|ref\|XP_002533590.1\|	3.2e-55	74.84	PREDICTED: 18.1 kDa class I heat shock protein [Ricinus communis]	[more]
gi\|659126469\|ref\|XP_008463198.1\|	5.4e-55	74.05	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo]	[more]
gi\|315932718\|gb\|ADU55789.1\|	5.4e-55	74.68	HSP18.1A [Citrullus lanatus]	[more]
gi\|1000938865\|ref\|XP_015583500.1\|	5.4e-55	74.19	PREDICTED: 18.1 kDa class I heat shock protein [Ricinus communis]	[more]
gi\|567864324\|ref\|XP_006424811.1\|	7.1e-55	73.25	hypothetical protein CICLE_v10029467mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G011480.1	CmaCh04G011480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 76..179 score: 9.3
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 76..165 score: 25
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 63..179 score: 2.2
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 55..180 score: 3.84
None	No IPR available	PANTHER	PTHR11527:SF152	SUBFAMILY NOT NAMED	coord: 45..180 score: 9.7

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G011480	Silver-seed gourd	carcmaB0034
CmaCh04G011480	Silver-seed gourd	carcmaB0116
CmaCh04G011480	Silver-seed gourd	carcmaB0375
CmaCh04G011480	Silver-seed gourd	carcmaB0948
CmaCh04G011480	Cucumber (Chinese Long) v3	cmacucB0884
CmaCh04G011480	Cucumber (Chinese Long) v3	cmacucB0912
CmaCh04G011480	Watermelon (97103) v2	cmawmbB719
CmaCh04G011480	Watermelon (97103) v2	cmawmbB727
CmaCh04G011480	Watermelon (97103) v2	cmawmbB754
CmaCh04G011480	Watermelon (97103) v2	cmawmbB780
CmaCh04G011480	Wax gourd	cmawgoB0864
CmaCh04G011480	Wax gourd	cmawgoB0889
CmaCh04G011480	Cucurbita maxima (Rimu)	cmacmaB272
CmaCh04G011480	Cucurbita maxima (Rimu)	cmacmaB326
CmaCh04G011480	Cucurbita maxima (Rimu)	cmacmaB516
CmaCh04G011480	Cucurbita maxima (Rimu)	cmacmaB531
CmaCh04G011480	Cucurbita maxima (Rimu)	cmacmaB533
CmaCh04G011480	Cucumber (Gy14) v1	cgycmaB0375
CmaCh04G011480	Cucumber (Gy14) v1	cgycmaB0472
CmaCh04G011480	Cucurbita moschata (Rifu)	cmacmoB695
CmaCh04G011480	Cucurbita moschata (Rifu)	cmacmoB726
CmaCh04G011480	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G011480	Cucurbita moschata (Rifu)	cmacmoB731
CmaCh04G011480	Cucurbita moschata (Rifu)	cmacmoB734
CmaCh04G011480	Wild cucumber (PI 183967)	cmacpiB756
CmaCh04G011480	Wild cucumber (PI 183967)	cmacpiB783
CmaCh04G011480	Cucumber (Chinese Long) v2	cmacuB690
CmaCh04G011480	Cucumber (Chinese Long) v2	cmacuB746
CmaCh04G011480	Cucumber (Chinese Long) v2	cmacuB772
CmaCh04G011480	Melon (DHL92) v3.5.1	cmameB655
CmaCh04G011480	Melon (DHL92) v3.5.1	cmameB682
CmaCh04G011480	Melon (DHL92) v3.5.1	cmameB686
CmaCh04G011480	Watermelon (Charleston Gray)	cmawcgB624
CmaCh04G011480	Watermelon (Charleston Gray)	cmawcgB673
CmaCh04G011480	Watermelon (97103) v1	cmawmB673
CmaCh04G011480	Watermelon (97103) v1	cmawmB678
CmaCh04G011480	Watermelon (97103) v1	cmawmB690
CmaCh04G011480	Watermelon (97103) v1	cmawmB740
CmaCh04G011480	Cucurbita pepo (Zucchini)	cmacpeB729
CmaCh04G011480	Cucurbita pepo (Zucchini)	cmacpeB708
CmaCh04G011480	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G011480	Cucurbita pepo (Zucchini)	cmacpeB723
CmaCh04G011480	Cucurbita pepo (Zucchini)	cmacpeB757
CmaCh04G011480	Bottle gourd (USVL1VR-Ls)	cmalsiB642
CmaCh04G011480	Bottle gourd (USVL1VR-Ls)	cmalsiB659
CmaCh04G011480	Bottle gourd (USVL1VR-Ls)	cmalsiB676
CmaCh04G011480	Cucumber (Gy14) v2	cgybcmaB412
CmaCh04G011480	Cucumber (Gy14) v2	cgybcmaB556
CmaCh04G011480	Cucumber (Gy14) v2	cgybcmaB673
CmaCh04G011480	Cucumber (Gy14) v2	cgybcmaB840
CmaCh04G011480	Melon (DHL92) v3.6.1	cmamedB741
CmaCh04G011480	Melon (DHL92) v3.6.1	cmamedB766
CmaCh04G011480	Melon (DHL92) v3.6.1	cmamedB803