CmaCh04G011460 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G011460
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	18.2 kDa class I heat shock family protein
Location	Cma_Chr04 : 5883316 .. 5884155 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTAGAAAATTCCAAAATCTTCTGGACCAATTGGGTAAGTTCATTGTTCTGTTTTTTGAATAAGCAAAGAAGCCCATAGTTGAGGCCCAATGAAACTATGGATTGGATCGGAATTACTGTGCAGAGTTGGTCCAAATCCATCCAGAACATGGTAGAAGCTTGTGGACAATCCAGGAAAGGAAGAGGGGAGAAGATACTAGAAAAGCCACGACACCACTCGCATGCTCTGTTTCTTCCTATTTAAATACCTTGATCCCAGGGGTGGAAGCGCATCGACAAACACAGCAAACAAAATTCCAATTCTATCATTCTCAACTATCAGTTTCAGCAATTCTACTATCTAATTCACCAACAAAGATGTCGCTGATTCCAAGCATTTTCGGTGGGCGACGGAGTAACGTCTTCGATCCCTTCTCCTTGGACGTTTGGGATCCTTTCGAAGGCTTCCCATTTTCGAGCTCACTGGCCAACGTCCCCTCCTCTGCTCGTGAGACCTCTGCTTTTGCGAACACCCGCATCGACTGGAAGGAGACCCCGGAAGCCCACATCTTCAAGGCGGATCTTCCGGGGATAAAAAAGGAGGAGGTGAAAGTTGAAGTTGAAGAGGGGGGAGTGCTGCAGATCAGTGGAGAGAGGAGCAAGGAACAGGAGGAGAAAAACGACAAGTGGCATAGAATTGAACGAAGCAGTGGGAAGTTCCTGAGGAGGTTCAGGCTGCCGGAGAACGCAAAAGCAGGAGAGGTGAAGGCGAGCATGGAGAATGGAGTGCTGACGGTGACAGTGCCTAAGATGGAAGTGAAGAAACCGGAAATCAAGACCATTGACATCTCCGGCTGA

mRNA sequence

ATGCGTAGAAAATTCCAAAATCTTCTGGACCAATTGGAGTTGGTCCAAATCCATCCAGAACATGGTAGAAGCTTGTGGACAATCCAGGAAAGGAAGAGGGGAGAAGATACTAGAAAAGCCACGACACCACTCGCATGCTCTGTTTCTTCCTATTTAAATACCTTGATCCCAGGGGTGGAAGCGCATCGACAAACACAGCAAACAAAATTCCAATTCTATCATTCTCAACTATCAGTTTCAGCAATTCTACTATCTAATTCACCAACAAAGATGTCGCTGATTCCAAGCATTTTCGGTGGGCGACGGAGTAACGTCTTCGATCCCTTCTCCTTGGACGTTTGGGATCCTTTCGAAGGCTTCCCATTTTCGAGCTCACTGGCCAACGTCCCCTCCTCTGCTCGTGAGACCTCTGCTTTTGCGAACACCCGCATCGACTGGAAGGAGACCCCGGAAGCCCACATCTTCAAGGCGGATCTTCCGGGGATAAAAAAGGAGGAGGTGAAAGTTGAAGTTGAAGAGGGGGGAGTGCTGCAGATCAGTGGAGAGAGGAGCAAGGAACAGGAGGAGAAAAACGACAAGTGGCATAGAATTGAACGAAGCAGTGGGAAGTTCCTGAGGAGGTTCAGGCTGCCGGAGAACGCAAAAGCAGGAGAGGTGAAGGCGAGCATGGAGAATGGAGTGCTGACGGTGACAGTGCCTAAGATGGAAGTGAAGAAACCGGAAATCAAGACCATTGACATCTCCGGCTGA

Coding sequence (CDS)

ATGCGTAGAAAATTCCAAAATCTTCTGGACCAATTGGAGTTGGTCCAAATCCATCCAGAACATGGTAGAAGCTTGTGGACAATCCAGGAAAGGAAGAGGGGAGAAGATACTAGAAAAGCCACGACACCACTCGCATGCTCTGTTTCTTCCTATTTAAATACCTTGATCCCAGGGGTGGAAGCGCATCGACAAACACAGCAAACAAAATTCCAATTCTATCATTCTCAACTATCAGTTTCAGCAATTCTACTATCTAATTCACCAACAAAGATGTCGCTGATTCCAAGCATTTTCGGTGGGCGACGGAGTAACGTCTTCGATCCCTTCTCCTTGGACGTTTGGGATCCTTTCGAAGGCTTCCCATTTTCGAGCTCACTGGCCAACGTCCCCTCCTCTGCTCGTGAGACCTCTGCTTTTGCGAACACCCGCATCGACTGGAAGGAGACCCCGGAAGCCCACATCTTCAAGGCGGATCTTCCGGGGATAAAAAAGGAGGAGGTGAAAGTTGAAGTTGAAGAGGGGGGAGTGCTGCAGATCAGTGGAGAGAGGAGCAAGGAACAGGAGGAGAAAAACGACAAGTGGCATAGAATTGAACGAAGCAGTGGGAAGTTCCTGAGGAGGTTCAGGCTGCCGGAGAACGCAAAAGCAGGAGAGGTGAAGGCGAGCATGGAGAATGGAGTGCTGACGGTGACAGTGCCTAAGATGGAAGTGAAGAAACCGGAAATCAAGACCATTGACATCTCCGGCTGA

Protein sequence

MRRKFQNLLDQLELVQIHPEHGRSLWTIQERKRGEDTRKATTPLACSVSSYLNTLIPGVEAHRQTQQTKFQFYHSQLSVSAILLSNSPTKMSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETPEAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRLPENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG

Homology

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BLAST of CmaCh04G011460 vs. Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.2e-66
Identity = 125/159 (78.62%), Postives = 143/159 (89.94%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MSLIPS FGGRRSNVFDPFSLDVWDPF+ FPF++S  +  S  RE SAF +TR+DWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSA-SFPRENSAFVSTRVDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAH+FKADLPG+KKEEVKVE+E+  VLQISGERS E+E+KND+WHR+ERSSGKF+RRFRL
Sbjct: 61  EAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  +VKA+MENGVLTVTVPK EVKKPE+KTIDISG
Sbjct: 121 PENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158

[Close]

BLAST of CmaCh04G011460 vs. Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.2e-66
Identity = 124/159 (77.99%), Postives = 142/159 (89.31%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MS+IPS FGGRRSNVFDPFSLDVWDPF+ FP  +S A+     +ET+AF NT IDWKETP
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSAS--EFGKETAAFVNTHIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           +AH+FKADLPG+KKEEVKVE+EEG VLQISGER+KE+EEKNDKWHR+ERSSGKFLRRFRL
Sbjct: 61  QAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  EVKA+M NGV+TVTVPK+E+KKPE+K IDISG
Sbjct: 121 PENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

[Close]

BLAST of CmaCh04G011460 vs. Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 8.0e-65
Identity = 126/160 (78.75%), Postives = 142/160 (88.75%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEG-FPFSSSLANVPSSARETSAFANTRIDWKET 150
           MSLIPSIFGGRRSNVFDPFS D+WDPFEG F  SS+LAN  S+AR+ +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKET 60

Query: 151 PEAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFR 210
           PEAH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKNDKWHR+ER+SGKF+RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 211 LPENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           LPENAK  EVKA+MENGVLTV VPK   KKP++K+IDISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 247.7 bits (631), Expect = 1.4e-64
Identity = 122/159 (76.73%), Postives = 140/159 (88.05%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MSLIPSIFGGRR+NVFDPFSLDV+DPFEGF   S LAN P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAH+FKADLPG++KEEVKVEVE+G +LQISGERS E EEKNDKWHR+ERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  E+KASMENGVL+VTVPK+  KKPE+K+IDISG
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of CmaCh04G011460 vs. Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.0e-64
Identity = 119/161 (73.91%), Postives = 143/161 (88.82%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSL--ANVPSSARETSAFANTRIDWKE 150
           MSLIP+ FGGRR+NVFDPFSLDVWDPF+ FPF ++L  A+ P  +RE SAF +TR+DWKE
Sbjct: 1   MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKE 60

Query: 151 TPEAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRF 210
           TPEAH+FKAD+PG+KKEEVKV++E+  VLQISGER+ E+E+KND WHR+ERSSGKF+RRF
Sbjct: 61  TPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRF 120

Query: 211 RLPENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           RLPENAK  +VKASMENGVLTVTVPK EVKKP++K I+ISG
Sbjct: 121 RLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161

[Close]

BLAST of CmaCh04G011460 vs. TrEMBL
Match: H6TB42_CITLA (HSP18.1A OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 7.0e-76
Identity = 146/159 (91.82%), Postives = 155/159 (97.48%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           M+LIP+IFGGRRSNVFDPFSLDVWDPFEGFPFS+SLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           +AHIFKADLPGIKKEEVKVEVEEG VLQISGERSKE EEKNDKWHRIERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAKA EVKASMENGVLTVTVPK+E KKPE+K+IDISG
Sbjct: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. TrEMBL
Match: A0A0A0KLU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 5.9e-75
Identity = 144/159 (90.57%), Postives = 152/159 (95.60%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           M+L+PSIFGGRRSNVFDPFSLD+WDPFEGFPFS+SLAN PSSARETSAFANTRIDWKETP
Sbjct: 1   MALVPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANAPSSARETSAFANTRIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           +AHIFKADLPGIKKEEVKVEVEEG VLQISGERSKEQEEKNDKWHRIERS GKF+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  EVKASMENGVLTV VPKME KKPEIK+IDI+G
Sbjct: 121 PENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of CmaCh04G011460 vs. TrEMBL
Match: H6TB47_CITLA (HSP18.1B OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.5e-73
Identity = 142/159 (89.31%), Postives = 153/159 (96.23%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MSLIPS FGGRRSNVFDPFSLD+WDPFEGFPF ++LAN+PSSA ETSAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDLWDPFEGFPFPTTLANLPSSALETSAFANTRIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           +AHIFKADLPGIKK+EVKVEVEEG VLQISGERSKEQEEKN+KWHRIERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGIKKDEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PE+AK  EVKASMENGVLTVTVPK+EVKKPEIK+IDISG
Sbjct: 121 PEDAKVEEVKASMENGVLTVTVPKVEVKKPEIKSIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. TrEMBL
Match: A0A0A0KQE2_CUCSA (Chloroplast small heat shock protein class I OS=Cucumis sativus GN=Csa_5G190560 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.0e-71
Identity = 138/159 (86.79%), Postives = 148/159 (93.08%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MS+IPS F GRRSNVFDPFSLD+WDPFEGFPFS S AN PSSA +TSAFANTRI WKETP
Sbjct: 1   MSIIPSFFCGRRSNVFDPFSLDIWDPFEGFPFSDSFANAPSSAPQTSAFANTRIGWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           +AHIFKADLPGIKKEEVKVEVEEG VLQISGERSKEQEEKNDKWHRIERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  EVKA++ENGVLTVTVPK+E KKPEI++IDISG
Sbjct: 121 PENAKVEEVKANVENGVLTVTVPKVEEKKPEIRSIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. TrEMBL
Match: A0A022R5L3_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015334mg PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 5.2e-71
Identity = 136/160 (85.00%), Postives = 151/160 (94.38%), Query Frame = 1


Query: 91  MSLIPSIFG-GRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKET 150
           MSLIPS FG GRRSN+FDPFSLDVWDPFEGFPFSS++AN+PSSARET+A AN RIDWKET
Sbjct: 1   MSLIPSFFGNGRRSNIFDPFSLDVWDPFEGFPFSSAVANLPSSARETTAVANARIDWKET 60

Query: 151 PEAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFR 210
           PEAH+FK D+PG+KKEEVKVEVE+G +LQISGERSKEQEEKNDKWHRIERSSGKF+RRFR
Sbjct: 61  PEAHLFKVDVPGLKKEEVKVEVEDGSILQISGERSKEQEEKNDKWHRIERSSGKFIRRFR 120

Query: 211 LPENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           LPENAK  +VKA+MENGVLTVTVPK EVKKPE+K+IDISG
Sbjct: 121 LPENAKLEQVKAAMENGVLTVTVPKEEVKKPEVKSIDISG 160

[Close]

BLAST of CmaCh04G011460 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2)

HSP 1 Score: 248.4 bits (633), Expect = 4.5e-66
Identity = 126/160 (78.75%), Postives = 142/160 (88.75%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEG-FPFSSSLANVPSSARETSAFANTRIDWKET 150
           MSLIPSIFGGRRSNVFDPFS D+WDPFEG F  SS+LAN  S+AR+ +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKET 60

Query: 151 PEAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFR 210
           PEAH+FKADLPG+KKEEVKVEVE+  VLQISGERSKE EEKNDKWHR+ER+SGKF+RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 211 LPENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           LPENAK  EVKA+MENGVLTV VPK   KKP++K+IDISG
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. TAIR10
Match: AT1G53540.1 (AT1G53540.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 247.7 bits (631), Expect = 7.7e-66
Identity = 122/159 (76.73%), Postives = 140/159 (88.05%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MSLIPSIFGGRR+NVFDPFSLDV+DPFEGF   S LAN P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAH+FKADLPG++KEEVKVEVE+G +LQISGERS E EEKNDKWHR+ERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  E+KASMENGVL+VTVPK+  KKPE+K+IDISG
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of CmaCh04G011460 vs. TAIR10
Match: AT3G46230.1 (AT3G46230.1 heat shock protein 17.4)

HSP 1 Score: 241.9 bits (616), Expect = 4.2e-64
Identity = 116/159 (72.96%), Postives = 139/159 (87.42%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MSL+PS FGGRR+NVFDPFSLDVWDPFEGF  +  L N P  A++ +AF N ++DW+ETP
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGF-LTPGLTNAP--AKDVAAFTNAKVDWRETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAH+FKAD+PG+KKEEVKVEVE+G +LQISGERS E EEK+D WHR+ERSSGKF+RRFRL
Sbjct: 61  EAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  EVKASMENGVL+VTVPK++  KPE+K++DISG
Sbjct: 121 PENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of CmaCh04G011460 vs. TAIR10
Match: AT2G29500.1 (AT2G29500.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-55
Identity = 110/160 (68.75%), Postives = 129/160 (80.62%), Query Frame = 1


Query: 91  MSLIPSIFGG-RRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKET 150
           MS+IPS F   RRSN+FDPFSLDVWDPF+    SSSL+      RE SA  N R+DW+ET
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELT-SSSLS------RENSAIVNARVDWRET 60

Query: 151 PEAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFR 210
           PEAH+FKADLPG+KKEEVKVE+EE  VL+ISGER  E+E+KND WHR+ERSSG+F RRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFR 120

Query: 211 LPENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           LPEN K  +VKA+MENGVLTVTVPK E KK ++K+I ISG
Sbjct: 121 LPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of CmaCh04G011460 vs. TAIR10
Match: AT1G07400.1 (AT1G07400.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 208.0 bits (528), Expect = 6.8e-54
Identity = 111/163 (68.10%), Postives = 130/163 (79.75%), Query Frame = 1


Query: 91  MSLIPSIFGG-RRSN-VFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKE 150
           MSLIPS FG  RRSN +FDPFSLDVWDPF+   F SSL+       ETSA  N R+DWKE
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG------ETSAITNARVDWKE 60

Query: 151 TPEAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRF 210
           T EAH+FKADLPG+KKEEVKVE+E+  VL+ISGER  E+EEK D WHR+ERSSG+F R+F
Sbjct: 61  TAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKF 120

Query: 211 RLPENAKAGEVKASMENGVLTVTVPKME--VKKPEIKTIDISG 250
           +LPEN K  +VKASMENGVLTVTVPK+E   KK ++K+IDISG
Sbjct: 121 KLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

[Close]

BLAST of CmaCh04G011460 vs. NCBI nr
Match: gi|315932718|gb|ADU55789.1| (HSP18.1A [Citrullus lanatus])

HSP 1 Score: 292.0 bits (746), Expect = 1.0e-75
Identity = 146/159 (91.82%), Postives = 155/159 (97.48%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           M+LIP+IFGGRRSNVFDPFSLDVWDPFEGFPFS+SLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDVWDPFEGFPFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           +AHIFKADLPGIKKEEVKVEVEEG VLQISGERSKE EEKNDKWHRIERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEHEEKNDKWHRIERSSGKFMRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAKA EVKASMENGVLTVTVPK+E KKPE+K+IDISG
Sbjct: 121 PENAKAEEVKASMENGVLTVTVPKIEEKKPEVKSIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. NCBI nr
Match: gi|659131157|ref|XP_008465538.1| (PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo])

HSP 1 Score: 290.0 bits (741), Expect = 3.8e-75
Identity = 146/159 (91.82%), Postives = 153/159 (96.23%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MSLIPSIFGGRRSNVFDPFSLD+WDPFEGFPFS+SLANVPSSA ETSAFANTRIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANVPSSAVETSAFANTRIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           +AHIFKADLPGIKKEEVKVEVEEG VLQISGERSKEQEEKNDKWHR+ERSSGKF RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFTRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  EVKA+MENGVLTVTVPK+E KKPEIK+IDISG
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKVEEKKPEIKSIDISG 159

[Close]

BLAST of CmaCh04G011460 vs. NCBI nr
Match: gi|659126469|ref|XP_008463198.1| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 289.7 bits (740), Expect = 5.0e-75
Identity = 145/159 (91.19%), Postives = 154/159 (96.86%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           M+LIPSIFGGRRSNVFDPFSLD+WDPFEGF FS+SLAN+PSSARETSAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           +AHIFKADLPGIKKEEVKVEVEEG VLQISGERSKEQEEKNDKWHRIERSSGKF+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  EVKA+MENGVLTVTVPKME KKPEIK+IDI+G
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of CmaCh04G011460 vs. NCBI nr
Match: gi|778701197|ref|XP_004150235.2| (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 8.5e-75
Identity = 144/159 (90.57%), Postives = 152/159 (95.60%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           M+L+PSIFGGRRSNVFDPFSLD+WDPFEGFPFS+SLAN PSSARETSAFANTRIDWKETP
Sbjct: 1   MALVPSIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANAPSSARETSAFANTRIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           +AHIFKADLPGIKKEEVKVEVEEG VLQISGERSKEQEEKNDKWHRIERS GKF+RRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSCGKFMRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  EVKASMENGVLTV VPKME KKPEIK+IDI+G
Sbjct: 121 PENAKVEEVKASMENGVLTVMVPKMEEKKPEIKSIDIAG 159

[Close]

BLAST of CmaCh04G011460 vs. NCBI nr
Match: gi|697161706|ref|XP_009589641.1| (PREDICTED: 18.2 kDa class I heat shock protein-like [Nicotiana tomentosiformis])

HSP 1 Score: 286.2 bits (731), Expect = 5.5e-74
Identity = 143/159 (89.94%), Postives = 151/159 (94.97%), Query Frame = 1


Query: 91  MSLIPSIFGGRRSNVFDPFSLDVWDPFEGFPFSSSLANVPSSARETSAFANTRIDWKETP 150
           MSLIPSIFGGRRSNVFDPFSLD+WDPFEGFP SS+LANVPSS RETSAFAN RIDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDMWDPFEGFPISSNLANVPSSVRETSAFANARIDWKETP 60

Query: 151 EAHIFKADLPGIKKEEVKVEVEEGGVLQISGERSKEQEEKNDKWHRIERSSGKFLRRFRL 210
           EAHIFKADLPG+KKEEVKVEVEEG VLQISGERSKEQEEKND+WHR+ERSSGKFLRRFRL
Sbjct: 61  EAHIFKADLPGLKKEEVKVEVEEGKVLQISGERSKEQEEKNDQWHRVERSSGKFLRRFRL 120

Query: 211 PENAKAGEVKASMENGVLTVTVPKMEVKKPEIKTIDISG 250
           PENAK  +VKASMENGVLTVTVPK EVKKPE+K I+ISG
Sbjct: 121 PENAKMDQVKASMENGVLTVTVPKEEVKKPEVKAIEISG 159

The following BLAST results are available for this feature:

BLAST of CmaCh04G011460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HSP12_MEDSA	4.2e-66	78.62	18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1	[more]
HSP11_DAUCA	4.2e-66	77.99	17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1	[more]
HS181_ARATH	8.0e-65	78.75	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=1 SV=1	[more]
HS17C_ARATH	1.4e-64	76.73	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 S...	[more]
HSP16_SOYBN	3.0e-64	73.91	18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1	[more]

BLAST of CmaCh04G011460 vs. TrEMBL


Match Name	E-value	Identity	Description
H6TB42_CITLA	7.0e-76	91.82	HSP18.1A OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0KLU0_CUCSA	5.9e-75	90.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G197620 PE=3 SV=1	[more]
H6TB47_CITLA	1.5e-73	89.31	HSP18.1B OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0KQE2_CUCSA	4.0e-71	86.79	Chloroplast small heat shock protein class I OS=Cucumis sativus GN=Csa_5G190560 ...	[more]
A0A022R5L3_ERYGU	5.2e-71	85.00	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015334mg PE=3 SV=1	[more]

BLAST of CmaCh04G011460 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59720.1	4.5e-66	78.75	heat shock protein 18.2	[more]
AT1G53540.1	7.7e-66	76.73	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	4.2e-64	72.96	heat shock protein 17.4	[more]
AT2G29500.1	1.6e-55	68.75	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	6.8e-54	68.10	HSP20-like chaperones superfamily protein	[more]

BLAST of CmaCh04G011460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|315932718\|gb\|ADU55789.1\|	1.0e-75	91.82	HSP18.1A [Citrullus lanatus]	[more]
gi\|659131157\|ref\|XP_008465538.1\|	3.8e-75	91.82	PREDICTED: 17.6 kDa class I heat shock protein 3-like [Cucumis melo]	[more]
gi\|659126469\|ref\|XP_008463198.1\|	5.0e-75	91.19	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo]	[more]
gi\|778701197\|ref\|XP_004150235.2\|	8.5e-75	90.57	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis sativus]	[more]
gi\|697161706\|ref\|XP_009589641.1\|	5.5e-74	89.94	PREDICTED: 18.2 kDa class I heat shock protein-like [Nicotiana tomentosiformis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G011460.1	CmaCh04G011460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 145..248 score: 9.9
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 145..234 score: 25
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 102..248 score: 4.1
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 119..249 score: 3.66
None	No IPR available	PANTHER	PTHR11527:SF152	SUBFAMILY NOT NAMED	coord: 20..249 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G011460	Cucurbita pepo (Zucchini)	cmacpeB729
CmaCh04G011460	Cucurbita pepo (Zucchini)	cmacpeB708
CmaCh04G011460	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G011460	Cucurbita pepo (Zucchini)	cmacpeB723
CmaCh04G011460	Cucurbita pepo (Zucchini)	cmacpeB757
CmaCh04G011460	Bottle gourd (USVL1VR-Ls)	cmalsiB642
CmaCh04G011460	Bottle gourd (USVL1VR-Ls)	cmalsiB659
CmaCh04G011460	Bottle gourd (USVL1VR-Ls)	cmalsiB676
CmaCh04G011460	Cucumber (Gy14) v2	cgybcmaB412
CmaCh04G011460	Cucumber (Gy14) v2	cgybcmaB556
CmaCh04G011460	Cucumber (Gy14) v2	cgybcmaB673
CmaCh04G011460	Cucumber (Gy14) v2	cgybcmaB840
CmaCh04G011460	Melon (DHL92) v3.6.1	cmamedB741
CmaCh04G011460	Melon (DHL92) v3.6.1	cmamedB766
CmaCh04G011460	Melon (DHL92) v3.6.1	cmamedB803
CmaCh04G011460	Silver-seed gourd	carcmaB0034
CmaCh04G011460	Silver-seed gourd	carcmaB0116
CmaCh04G011460	Silver-seed gourd	carcmaB0375
CmaCh04G011460	Silver-seed gourd	carcmaB0948
CmaCh04G011460	Cucumber (Chinese Long) v3	cmacucB0884
CmaCh04G011460	Cucumber (Chinese Long) v3	cmacucB0912
CmaCh04G011460	Watermelon (97103) v2	cmawmbB719
CmaCh04G011460	Watermelon (97103) v2	cmawmbB727
CmaCh04G011460	Watermelon (97103) v2	cmawmbB754
CmaCh04G011460	Watermelon (97103) v2	cmawmbB780
CmaCh04G011460	Wax gourd	cmawgoB0864
CmaCh04G011460	Wax gourd	cmawgoB0889
CmaCh04G011460	Cucurbita maxima (Rimu)	cmacmaB272
CmaCh04G011460	Cucurbita maxima (Rimu)	cmacmaB326
CmaCh04G011460	Cucurbita maxima (Rimu)	cmacmaB516
CmaCh04G011460	Cucurbita maxima (Rimu)	cmacmaB531
CmaCh04G011460	Cucurbita maxima (Rimu)	cmacmaB533
CmaCh04G011460	Cucumber (Gy14) v1	cgycmaB0375
CmaCh04G011460	Cucumber (Gy14) v1	cgycmaB0472
CmaCh04G011460	Cucurbita moschata (Rifu)	cmacmoB695
CmaCh04G011460	Cucurbita moschata (Rifu)	cmacmoB726
CmaCh04G011460	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G011460	Cucurbita moschata (Rifu)	cmacmoB731
CmaCh04G011460	Cucurbita moschata (Rifu)	cmacmoB734
CmaCh04G011460	Wild cucumber (PI 183967)	cmacpiB756
CmaCh04G011460	Wild cucumber (PI 183967)	cmacpiB783
CmaCh04G011460	Cucumber (Chinese Long) v2	cmacuB746
CmaCh04G011460	Cucumber (Chinese Long) v2	cmacuB772
CmaCh04G011460	Melon (DHL92) v3.5.1	cmameB655
CmaCh04G011460	Melon (DHL92) v3.5.1	cmameB682
CmaCh04G011460	Melon (DHL92) v3.5.1	cmameB686
CmaCh04G011460	Watermelon (Charleston Gray)	cmawcgB624
CmaCh04G011460	Watermelon (Charleston Gray)	cmawcgB673
CmaCh04G011460	Watermelon (97103) v1	cmawmB673
CmaCh04G011460	Watermelon (97103) v1	cmawmB678
CmaCh04G011460	Watermelon (97103) v1	cmawmB690
CmaCh04G011460	Watermelon (97103) v1	cmawmB740