CmaCh04G011310 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGAGAAGAACACAATTTTTTGCACCCATCCTCCTGCAGTAAGATTGTTACAGTCATATATGTTGGTTATGATGATTAAAGAAAGCATTATCATCATGATTATATATATGATTGTAATTTAATTGTTGTATGTACAGGGATCCTTGAGCAGCACTGGATTGGTAGTGTGTTCAAAATTTCCCAGATTCTCTCATCTCTATACTCTAACCATATCTAGTTCAGAACCCAAATCAATCTGCGCTAATGAATCAGTTCAACTTACCAAGAGTGTCACTCGCTGGTCTCTTTCCTTGTCTCCACTGCATTCTGGAATCCAATTACTTTTTTCTGAAAATTATACTCTCTTCCAGGTTTACCAAGGATGGAGTTTTAGTTGAGGGGTTCTTCTGGAAAGATGTCGAAGCACTGATCGATGATTATTCACGAGGACCGAAGAAGAGCAGCTGATTTCTTCTGGGGGTCGAACTTTCAATTTTCATTTCTAGCACACTCAATTATATTTTCCTTCATTAGTAGTATAGCCTTTACAAAGTTTGAATACTGTCTCTCAACATCTCTTTCTGTGTAGTTTTAGAACAGAATCAATTGACACATGCTGTTTTGTTTTTCTTTGGTATCGCAGAGTTTGATATTGATGAACCTTTTAGAACATTGTTGTATTCCAACCACCAGAGGCATGTG ATGAAGGAGAAGAACACAATTTTTTGCACCCATCCTCCTGCAGGATCCTTGAGCAGCACTGGATTGGTAGTGTGTTCAAAATTTCCCAGATTCTCTCATCTCTATACTCTAACCATATCTAGTTCAGAACCCAAATCAATCTGCGCTAATGAATCAGTTCAACTTACCAAGAGTGTCACTCGCTGGTTTACCAAGGATGGAGTTTTAGTTGAGGGGTTCTTCTGGAAAGATGTCGAAGCACTGATCGATGATTATTCACGAGGACCGAAGAAGAGCAGCTGATTTCTTCTGGGGAGTTTGATATTGATGAACCTTTTAGAACATTGTTGTATTCCAACCACCAGAGGCATGTG ATGAAGGAGAAGAACACAATTTTTTGCACCCATCCTCCTGCAGGATCCTTGAGCAGCACTGGATTGGTAGTGTGTTCAAAATTTCCCAGATTCTCTCATCTCTATACTCTAACCATATCTAGTTCAGAACCCAAATCAATCTGCGCTAATGAATCAGTTCAACTTACCAAGAGTGTCACTCGCTGGTTTACCAAGGATGGAGTTTTAGTTGAGGGGTTCTTCTGGAAAGATGTCGAAGCACTGATCGATGATTATTCACGAGGACCGAAGAAGAGCAGCTGA MKEKNTIFCTHPPAGSLSSTGLVVCSKFPRFSHLYTLTISSSEPKSICANESVQLTKSVTRWFTKDGVLVEGFFWKDVEALIDDYSRGPKKSS
BLAST of CmaCh04G011310 vs. Swiss-Prot
Match: SPCS2_ARATH (Probable signal peptidase complex subunit 2 OS=Arabidopsis thaliana GN=At2g39960 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 3.1e-30 Identity = 66/91 (72.53%), Postives = 74/91 (81.32%), Query Frame = 1
BLAST of CmaCh04G011310 vs. TrEMBL
Match: A0A0A0KSD0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G198750 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 3.2e-34 Identity = 73/91 (80.22%), Postives = 79/91 (86.81%), Query Frame = 1
BLAST of CmaCh04G011310 vs. TrEMBL
Match: A0A0L9UWL6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan07g063800 PE=4 SV=1) HSP 1 Score: 142.5 bits (358), Expect = 2.6e-31 Identity = 66/91 (72.53%), Postives = 77/91 (84.62%), Query Frame = 1
BLAST of CmaCh04G011310 vs. TrEMBL
Match: W9R8H0_9ROSA (Putative signal peptidase complex subunit 2 OS=Morus notabilis GN=L484_026365 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 4.4e-31 Identity = 66/90 (73.33%), Postives = 77/90 (85.56%), Query Frame = 1
BLAST of CmaCh04G011310 vs. TrEMBL
Match: I3T9H9_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 1.7e-30 Identity = 67/91 (73.63%), Postives = 76/91 (83.52%), Query Frame = 1
BLAST of CmaCh04G011310 vs. TrEMBL
Match: A0A0D2VSM8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G280300 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 2.2e-30 Identity = 66/90 (73.33%), Postives = 77/90 (85.56%), Query Frame = 1
BLAST of CmaCh04G011310 vs. TAIR10
Match: AT2G39960.1 (AT2G39960.1 Microsomal signal peptidase 25 kDa subunit (SPC25)) HSP 1 Score: 132.1 bits (331), Expect = 1.8e-31 Identity = 66/91 (72.53%), Postives = 74/91 (81.32%), Query Frame = 1
BLAST of CmaCh04G011310 vs. TAIR10
Match: AT4G04200.1 (AT4G04200.1 Microsomal signal peptidase 25 kDa subunit (SPC25)) HSP 1 Score: 123.6 bits (309), Expect = 6.3e-29 Identity = 61/93 (65.59%), Postives = 72/93 (77.42%), Query Frame = 1
BLAST of CmaCh04G011310 vs. NCBI nr
Match: gi|778701239|ref|XP_011654984.1| (PREDICTED: probable signal peptidase complex subunit 2 [Cucumis sativus]) HSP 1 Score: 152.1 bits (383), Expect = 4.7e-34 Identity = 73/91 (80.22%), Postives = 79/91 (86.81%), Query Frame = 1
BLAST of CmaCh04G011310 vs. NCBI nr
Match: gi|700195459|gb|KGN50636.1| (hypothetical protein Csa_5G198750 [Cucumis sativus]) HSP 1 Score: 152.1 bits (383), Expect = 4.7e-34 Identity = 73/91 (80.22%), Postives = 79/91 (86.81%), Query Frame = 1
BLAST of CmaCh04G011310 vs. NCBI nr
Match: gi|659126506|ref|XP_008463218.1| (PREDICTED: probable signal peptidase complex subunit 2 [Cucumis melo]) HSP 1 Score: 150.2 bits (378), Expect = 1.8e-33 Identity = 72/91 (79.12%), Postives = 79/91 (86.81%), Query Frame = 1
BLAST of CmaCh04G011310 vs. NCBI nr
Match: gi|920703709|gb|KOM46934.1| (hypothetical protein LR48_Vigan07g063800 [Vigna angularis]) HSP 1 Score: 142.5 bits (358), Expect = 3.7e-31 Identity = 66/91 (72.53%), Postives = 77/91 (84.62%), Query Frame = 1
BLAST of CmaCh04G011310 vs. NCBI nr
Match: gi|950986083|ref|XP_014503494.1| (PREDICTED: probable signal peptidase complex subunit 2 [Vigna radiata var. radiata]) HSP 1 Score: 142.1 bits (357), Expect = 4.8e-31 Identity = 66/91 (72.53%), Postives = 77/91 (84.62%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |